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Conserved domains on  [gi|518292796|ref|WP_019463004|]
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MULTISPECIES: ATP synthase F1 subunit epsilon [Roseomonas]

Protein Classification

F0F1 ATP synthase subunit epsilon( domain architecture ID 11417490)

F0F1 ATP synthase subunit epsilon is part of the catalytic core of the F-type ATPase that produces ATP from ADP in the presence of a proton gradient across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
AtpC COG0355
FoF1-type ATP synthase, epsilon subunit [Energy production and conversion]; FoF1-type ATP ...
 5-101 3.42e-34

FoF1-type ATP synthase, epsilon subunit [Energy production and conversion]; FoF1-type ATP synthase, epsilon subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


:

Pssm-ID: 440124 [Multi-domain]  Cd Length: 131  Bit Score: 115.67  E-value: 3.42e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518292796   5 FNLELVSPEKLLLSRPVEMVTIPAWEGEMGILPKHAPMIVALRGGLIKVREGGRDTESLFVAGGFAEITPDRVTVLADEA 84
Cdd:COG0355    1 LKLEIVTPERVLFSGEVESVVAPGAEGEFGILPGHAPLLTALKPGVVRIRTEDGEEEYFAVSGGFLEVQPNKVTILADTA 80

                         90
                 ....*....|....*..
gi 518292796  85 TPVAELSRADAESRLTQ 101
Cdd:COG0355   81 ERAEDIDVERAEEAKER 97
 
Name Accession Description Interval E-value
AtpC COG0355
FoF1-type ATP synthase, epsilon subunit [Energy production and conversion]; FoF1-type ATP ...
 5-101 3.42e-34

FoF1-type ATP synthase, epsilon subunit [Energy production and conversion]; FoF1-type ATP synthase, epsilon subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440124 [Multi-domain]  Cd Length: 131  Bit Score: 115.67  E-value: 3.42e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518292796   5 FNLELVSPEKLLLSRPVEMVTIPAWEGEMGILPKHAPMIVALRGGLIKVREGGRDTESLFVAGGFAEITPDRVTVLADEA 84
Cdd:COG0355    1 LKLEIVTPERVLFSGEVESVVAPGAEGEFGILPGHAPLLTALKPGVVRIRTEDGEEEYFAVSGGFLEVQPNKVTILADTA 80

                         90
                 ....*....|....*..
gi 518292796  85 TPVAELSRADAESRLTQ 101
Cdd:COG0355   81 ERAEDIDVERAEEAKER 97
atpC PRK00571
F0F1 ATP synthase subunit epsilon; Validated
 2-99 4.32e-34

F0F1 ATP synthase subunit epsilon; Validated


Pssm-ID: 234796 [Multi-domain]  Cd Length: 135  Bit Score: 115.63  E-value: 4.32e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518292796   2 ADTFNLELVSPEKLLLSRPVEMVTIPAWEGEMGILPKHAPMIVALRGGLIKVREGGRDTESLFVAGGFAEITPDRVTVLA 81
Cdd:PRK00571   1 MATLTVDIVSPEGLIYSGEVEEVVVPGTEGELGILPGHAPLLTALKPGVVRIKKDDGEEEVIAVSGGFLEVQPDKVTVLA 80

                         90
                 ....*....|....*...
gi 518292796  82 DEATPVAELSRADAESRL 99
Cdd:PRK00571  81 DSAERADDIDEARAEEAK 98
F1-ATPase_delta cd12152
mitochondrial ATP synthase delta subunit; The F-ATPase is found in bacterial plasma membranes, ...
 5-99 6.13e-33

mitochondrial ATP synthase delta subunit; The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to drive ATP synthesis and hydrolyzes ATP to build the proton gradient. The extrinisic membrane domain, F1, is composed of alpha, beta, gamma, delta, and epsilon subunits with a stoichiometry of 3:3:1:1:1. Alpha and beta subunit form the globular catalytic moiety, a hexameric ring of alternating subunits. Gamma, delta and epsilon subunits form a stalk, connecting F1 to F0, the integral membrane proton translocating domain. In bacteria, which is lacking a eukaryotic epsilon subunit homolog, this subunit is called the epsilon subunit.


Pssm-ID: 213395 [Multi-domain]  Cd Length: 123  Bit Score: 112.22  E-value: 6.13e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518292796   5 FNLELVSPEKLLLSRPVEMVTIPAWEGEMGILPKHAPMIVALRGGLIKVREGGRDTESLFVAGGFAEITPDRVTVLADEA 84
Cdd:cd12152    1 LKLEIVTPERVFFSGEVESVVLPGTEGEFGILPGHAPLVTALKPGVLRIRDEDGEEKYFAVSGGFLEVTPNRVTILADEA 80

                         90
                 ....*....|....*
gi 518292796  85 TPVAELSRADAESRL 99
Cdd:cd12152   81 ERPEDIDVERAEEAL 95
ATP-synt_DE_N pfam02823
ATP synthase, Delta/Epsilon chain, beta-sandwich domain; Part of the ATP synthase CF(1). These ...
 5-84 1.77e-31

ATP synthase, Delta/Epsilon chain, beta-sandwich domain; Part of the ATP synthase CF(1). These subunits are part of the head unit of the ATP synthase. The subunit is called epsilon in bacteria and delta in mitochondria. In bacteria the delta (D) subunit is equivalent to the mitochondrial Oligomycin sensitive subunit, OSCP (pfam00213).


Pssm-ID: 460714 [Multi-domain]  Cd Length: 80  Bit Score: 107.14  E-value: 1.77e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518292796    5 FNLELVSPEKLLLSRPVEMVTIPAWEGEMGILPKHAPMIVALRGGLIKVREGGRDTESLFVAGGFAEITPDRVTVLADEA 84
Cdd:pfam02823   1 LKLEIVTPERVVFSGEVEMVVAPGAEGELGILPGHAPLLTALKPGVLRIKTEDGEEEYIAVSGGFLEVQPNKVTILADSA 80
ATP_synt_epsi TIGR01216
ATP synthase, F1 epsilon subunit (delta in mitochondria); This model describes one of the five ...
 4-101 2.53e-29

ATP synthase, F1 epsilon subunit (delta in mitochondria); This model describes one of the five types of subunits in the F1 part of F1/F0 ATP synthases. Members of this family are designated epsilon in bacterial and chloroplast systems but designated delta in mitochondria, where the counterpart of the bacterial delta subunit is designated OSCP. In a few cases (Propionigenium modestum, Acetobacterium woodii) scoring above the trusted cutoff and designated here as exceptions, Na+ replaces H+ for translocation. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273506 [Multi-domain]  Cd Length: 130  Bit Score: 103.10  E-value: 2.53e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518292796    4 TFNLELVSPEKLLLSRPVEMVTIPAWEGEMGILPKHAPMIVALRGGLIKVREGGRDTESLFVAGGFAEITPDRVTVLADE 83
Cdd:TIGR01216   1 TLKLEIVTPEGEIYSGEVESVILPGSEGELGILPGHAPLITALKPGVVRIRKLGDDWEHIAVSGGFAEVQPDKVTILADG 80

                          90
                  ....*....|....*...
gi 518292796   84 ATPVAELSRADAESRLTQ 101
Cdd:TIGR01216  81 AVFADDIDEAEAEKALEA 98
 
Name Accession Description Interval E-value
AtpC COG0355
FoF1-type ATP synthase, epsilon subunit [Energy production and conversion]; FoF1-type ATP ...
 5-101 3.42e-34

FoF1-type ATP synthase, epsilon subunit [Energy production and conversion]; FoF1-type ATP synthase, epsilon subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440124 [Multi-domain]  Cd Length: 131  Bit Score: 115.67  E-value: 3.42e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518292796   5 FNLELVSPEKLLLSRPVEMVTIPAWEGEMGILPKHAPMIVALRGGLIKVREGGRDTESLFVAGGFAEITPDRVTVLADEA 84
Cdd:COG0355    1 LKLEIVTPERVLFSGEVESVVAPGAEGEFGILPGHAPLLTALKPGVVRIRTEDGEEEYFAVSGGFLEVQPNKVTILADTA 80

                         90
                 ....*....|....*..
gi 518292796  85 TPVAELSRADAESRLTQ 101
Cdd:COG0355   81 ERAEDIDVERAEEAKER 97
atpC PRK00571
F0F1 ATP synthase subunit epsilon; Validated
 2-99 4.32e-34

F0F1 ATP synthase subunit epsilon; Validated


Pssm-ID: 234796 [Multi-domain]  Cd Length: 135  Bit Score: 115.63  E-value: 4.32e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518292796   2 ADTFNLELVSPEKLLLSRPVEMVTIPAWEGEMGILPKHAPMIVALRGGLIKVREGGRDTESLFVAGGFAEITPDRVTVLA 81
Cdd:PRK00571   1 MATLTVDIVSPEGLIYSGEVEEVVVPGTEGELGILPGHAPLLTALKPGVVRIKKDDGEEEVIAVSGGFLEVQPDKVTVLA 80

                         90
                 ....*....|....*...
gi 518292796  82 DEATPVAELSRADAESRL 99
Cdd:PRK00571  81 DSAERADDIDEARAEEAK 98
F1-ATPase_delta cd12152
mitochondrial ATP synthase delta subunit; The F-ATPase is found in bacterial plasma membranes, ...
 5-99 6.13e-33

mitochondrial ATP synthase delta subunit; The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to drive ATP synthesis and hydrolyzes ATP to build the proton gradient. The extrinisic membrane domain, F1, is composed of alpha, beta, gamma, delta, and epsilon subunits with a stoichiometry of 3:3:1:1:1. Alpha and beta subunit form the globular catalytic moiety, a hexameric ring of alternating subunits. Gamma, delta and epsilon subunits form a stalk, connecting F1 to F0, the integral membrane proton translocating domain. In bacteria, which is lacking a eukaryotic epsilon subunit homolog, this subunit is called the epsilon subunit.


Pssm-ID: 213395 [Multi-domain]  Cd Length: 123  Bit Score: 112.22  E-value: 6.13e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518292796   5 FNLELVSPEKLLLSRPVEMVTIPAWEGEMGILPKHAPMIVALRGGLIKVREGGRDTESLFVAGGFAEITPDRVTVLADEA 84
Cdd:cd12152    1 LKLEIVTPERVFFSGEVESVVLPGTEGEFGILPGHAPLVTALKPGVLRIRDEDGEEKYFAVSGGFLEVTPNRVTILADEA 80

                         90
                 ....*....|....*
gi 518292796  85 TPVAELSRADAESRL 99
Cdd:cd12152   81 ERPEDIDVERAEEAL 95
ATP-synt_DE_N pfam02823
ATP synthase, Delta/Epsilon chain, beta-sandwich domain; Part of the ATP synthase CF(1). These ...
 5-84 1.77e-31

ATP synthase, Delta/Epsilon chain, beta-sandwich domain; Part of the ATP synthase CF(1). These subunits are part of the head unit of the ATP synthase. The subunit is called epsilon in bacteria and delta in mitochondria. In bacteria the delta (D) subunit is equivalent to the mitochondrial Oligomycin sensitive subunit, OSCP (pfam00213).


Pssm-ID: 460714 [Multi-domain]  Cd Length: 80  Bit Score: 107.14  E-value: 1.77e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518292796    5 FNLELVSPEKLLLSRPVEMVTIPAWEGEMGILPKHAPMIVALRGGLIKVREGGRDTESLFVAGGFAEITPDRVTVLADEA 84
Cdd:pfam02823   1 LKLEIVTPERVVFSGEVEMVVAPGAEGELGILPGHAPLLTALKPGVLRIKTEDGEEEYIAVSGGFLEVQPNKVTILADSA 80
ATP_synt_epsi TIGR01216
ATP synthase, F1 epsilon subunit (delta in mitochondria); This model describes one of the five ...
 4-101 2.53e-29

ATP synthase, F1 epsilon subunit (delta in mitochondria); This model describes one of the five types of subunits in the F1 part of F1/F0 ATP synthases. Members of this family are designated epsilon in bacterial and chloroplast systems but designated delta in mitochondria, where the counterpart of the bacterial delta subunit is designated OSCP. In a few cases (Propionigenium modestum, Acetobacterium woodii) scoring above the trusted cutoff and designated here as exceptions, Na+ replaces H+ for translocation. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273506 [Multi-domain]  Cd Length: 130  Bit Score: 103.10  E-value: 2.53e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518292796    4 TFNLELVSPEKLLLSRPVEMVTIPAWEGEMGILPKHAPMIVALRGGLIKVREGGRDTESLFVAGGFAEITPDRVTVLADE 83
Cdd:TIGR01216   1 TLKLEIVTPEGEIYSGEVESVILPGSEGELGILPGHAPLITALKPGVVRIRKLGDDWEHIAVSGGFAEVQPDKVTILADG 80

                          90
                  ....*....|....*...
gi 518292796   84 ATPVAELSRADAESRLTQ 101
Cdd:TIGR01216  81 AVFADDIDEAEAEKALEA 98
atpC PRK14736
F0F1 ATP synthase subunit epsilon; Provisional
 1-96 7.11e-25

F0F1 ATP synthase subunit epsilon; Provisional


Pssm-ID: 173198 [Multi-domain]  Cd Length: 133  Bit Score: 92.16  E-value: 7.11e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518292796   1 MAdTFNLELVSPEKLLLSRPVEMVTIPAWEGEMGILPKHAPMIVALRGGLIKVREGGRDTESLFVAGGFAEITPDRVTVL 80
Cdd:PRK14736   1 MA-TFHFDLVGPERTLYSGEVEAVQLPGSEGEMTVLPGHAPVLTTLKVGVITVTETTGNGKRIYVRGGFAEIGPTSVTVL 79

                         90
                 ....*....|....*...
gi 518292796  81 ADEATPVAELSRA--DAE 96
Cdd:PRK14736  80 AERAAPVEELTPEmiDRE 97
atpC PRK13446
F0F1 ATP synthase subunit epsilon; Provisional
 1-101 9.04e-24

F0F1 ATP synthase subunit epsilon; Provisional


Pssm-ID: 184056 [Multi-domain]  Cd Length: 136  Bit Score: 89.25  E-value: 9.04e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518292796   1 MADTFNLELVSPEKLLLSRPVEMVTIPAWEGEMGILPKHAPMIVALRGGLIKVREGGRdTESLFVAGGFAEITPDRVTVL 80
Cdd:PRK13446   1 MAKKLKLEIVTPEKKVLSEEVDEVGAPGVLGEFGVLPGHAPFLTALKIGELTYKKGGK-THYVAVNGGFAEVSNNKVTVL 79

                         90       100
                 ....*....|....*....|....*...
gi 518292796  81 ADEATPV-------AELSRADAESRLTQ 101
Cdd:PRK13446  80 AETAERAeeidverARAALERAEQRLKK 107
atpC PRK13448
F0F1 ATP synthase subunit epsilon; Provisional
 1-94 1.48e-23

F0F1 ATP synthase subunit epsilon; Provisional


Pssm-ID: 139579 [Multi-domain]  Cd Length: 135  Bit Score: 88.68  E-value: 1.48e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518292796   1 MAdTFNLELVSPEKLLLSRPVEMVTIPAWEGEMGILPKHAPMIVALRGGLIKVREGGRDtESLFVAGGFAEITPDRVTVL 80
Cdd:PRK13448   1 MA-TFHFDLVSPEKLAFSGEVDQVDIPGVEGDFGVLAGHAPVVAVIRPGILTVTAGGNQ-QKIVVLGGLAEVSEKGLTVL 78

                         90
                 ....*....|....
gi 518292796  81 ADEATPVAELSRAD 94
Cdd:PRK13448  79 ADVATSVADLDLAQ 92
atpC PRK13443
F0F1 ATP synthase subunit epsilon; Provisional
 1-94 4.93e-22

F0F1 ATP synthase subunit epsilon; Provisional


Pssm-ID: 237388 [Multi-domain]  Cd Length: 136  Bit Score: 84.97  E-value: 4.93e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518292796   1 MADTFNLELVSPEKLLLSRPVEMVTIPAWEGEMGILPKHAPMIVALRGGLIKVrEGGRDTESLFVAGGFAEITPDRVTVL 80
Cdd:PRK13443   1 MAGTLQFDLVSPERRLASFQATAVQIPGADGDMTAMEGHAPTITTLRPGILRA-HGPSGTQEYAVTGGFAEINATSISVL 79

                         90
                 ....*....|....
gi 518292796  81 ADEATPVAELSRAD 94
Cdd:PRK13443  80 AEKAIPVEELTGAV 93
atpC PRK13449
ATP synthase F1 subunit epsilon;
2-88 8.25e-19

ATP synthase F1 subunit epsilon;


Pssm-ID: 184058 [Multi-domain]  Cd Length: 88  Bit Score: 75.19  E-value: 8.25e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518292796   2 ADTFNLELVSPEKLLLSRPVEMVTIPAWEGEMGILPKHAPMIVALRGGLIKVREG-GRDTESLFVAGGFAEITPDRVTVL 80
Cdd:PRK13449   1 MAKLHFELVTPERLLRSGEVDMVVVPGTEGDFGVLAGHAPFMTTLREGEVTVYSSdGAAPEVFHVQGGFAEVNEKGLTIL 80


                 ....*...
gi 518292796  81 ADEATPVA 88
Cdd:PRK13449  81 AEHAVEAA 88
atpC PRK01474
F0F1 ATP synthase subunit epsilon; Validated
 1-101 9.29e-17

F0F1 ATP synthase subunit epsilon; Validated


Pssm-ID: 100879  Cd Length: 112  Bit Score: 70.67  E-value: 9.29e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518292796   1 MADTFNLELVSPEKLLLSRPVEMVTIPAWEGEMGILPKHAPMIVALRGGLIKV--REGGRDTESLFVAGGFAEITPDRVT 78
Cdd:PRK01474   1 MNETILVKIITPLSIAFEKQAKMVTMPGEEGMFGVLPSHVPMIVSLKAGLVQVyiDDMHKSENTYLISGGVTEVTGNYIN 80

                         90       100
                 ....*....|....*....|...
gi 518292796  79 VLADEATPVAELSRADAESRLTQ 101
Cdd:PRK01474  81 IATETAINVTNLSEAEIATKLLD 103
atpC PRK14735
F0F1 ATP synthase subunit epsilon; Provisional
 6-97 3.31e-16

F0F1 ATP synthase subunit epsilon; Provisional


Pssm-ID: 173197 [Multi-domain]  Cd Length: 139  Bit Score: 70.03  E-value: 3.31e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518292796   6 NLELVSPEKLLLSRPVEMVTIPAWEGEMGILPKHAPMIVALRGGLIKVREGGRDTeSLFVAGGFAEITPDRVTVLADEAT 85
Cdd:PRK14735   4 HLEIVTAERVVLSDDVDMISAPTKDGRVGILPRHAPLLTILEPGELDIVKNGVRT-PFAISGGFMEVLPHRVTILADTAE 82

                         90
                 ....*....|..
gi 518292796  86 PVAELSRADAES 97
Cdd:PRK14735  83 RADEIDEARAEQ 94
atpC PRK13444
F0F1 ATP synthase subunit epsilon; Provisional
 1-82 2.09e-15

F0F1 ATP synthase subunit epsilon; Provisional


Pssm-ID: 139576 [Multi-domain]  Cd Length: 127  Bit Score: 67.60  E-value: 2.09e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518292796   1 MADTFNLELVSPEKLLLSRPVEMVTIPAWEGEMGILPKHAPMIVALRGGLIKVREGGRDtESLFVAGGFAEITPDRVTVL 80
Cdd:PRK13444   2 MAKKLTVSVISPEKILYKGEVDSLIVPGSEGFFGILPNHAPLVATLGIGLLEIRKGEKL-KRISVEGGFCEVKDNQISIL 80


                 ..
gi 518292796  81 AD 82
Cdd:PRK13444  81 TD 82
atpE CHL00063
ATP synthase CF1 epsilon subunit
 4-84 2.72e-14

ATP synthase CF1 epsilon subunit


Pssm-ID: 214351 [Multi-domain]  Cd Length: 134  Bit Score: 64.89  E-value: 2.72e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518292796   4 TFNLELVSPEKLLLSRPVEMVTIPAWEGEMGILPKHAPMIVALRGGLIKVREGGRDTeSLFVAGGFAEITPDRVTVLADE 83
Cdd:CHL00063   2 TLNLRVLTPNRIVWDSEVEEIILPTNSGQIGVLPNHAPIATALDIGVLRIRLNDQWL-TMALMGGFARIGNNEITILVND 80


                 .
gi 518292796  84 A 84
Cdd:CHL00063  81 A 81
atpC PRK13442
F0F1 ATP synthase subunit epsilon; Provisional
 1-88 4.57e-14

F0F1 ATP synthase subunit epsilon; Provisional


Pssm-ID: 184055 [Multi-domain]  Cd Length: 89  Bit Score: 63.11  E-value: 4.57e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518292796   1 MADTFNLELVSPEKLLLSRPVEMVTIPAWEGEMGILPKHAPMIVALRGGLIKVREGGRDTESLFVAGGFAEITPDRVTVL 80
Cdd:PRK13442   2 AGATLHVNIVAADRPVWSGEATMVVARTTEGDIGILPGHEPLLGVLESGTVTVVTPGGERISAAVDGGFISFDSNKLTVL 81


                 ....*...
gi 518292796  81 ADEATPVA 88
Cdd:PRK13442  82 AERAELVA 89
atpC PRK13451
F0F1 ATP synthase subunit epsilon; Provisional
 7-91 9.10e-12

F0F1 ATP synthase subunit epsilon; Provisional


Pssm-ID: 172059  Cd Length: 101  Bit Score: 57.49  E-value: 9.10e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518292796   7 LELVSPEKLLLSRPVEMVTIPAWEGEMGILPKHAPMIVALRGGLIKVREgGRDTESLFVAGGFAEITPDRVTVLADEATP 86
Cdd:PRK13451   3 VKIVTPYGIVYDRESDFVSFRTVEGEMGILPRRAPIIAKLSVCDVKIKS-GDDEYEYKVADGFLHCDGKNVIIITEEAGR 81


                 ....*
gi 518292796  87 VAELS 91
Cdd:PRK13451  82 EEEIS 86
atpC PRK13452
F0F1 ATP synthase subunit epsilon; Provisional
 5-96 3.67e-11

F0F1 ATP synthase subunit epsilon; Provisional


Pssm-ID: 106409 [Multi-domain]  Cd Length: 145  Bit Score: 57.06  E-value: 3.67e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518292796   5 FNLELVSPEKLLLSRPVEMVTIPAWEGEMGILPKHAPMIVALRGGLIKVREGgRDTESLFVAGGFAEITPDRVTVLADEA 84
Cdd:PRK13452   6 LKVDVVSPLGSVFKGEADMVSLRGSAGEMGIAYGHTELLSTLPAGVVNVRKD-QHTDVLYVSGGIVEVTPTRVTIMVDDM 84

                         90
                 ....*....|..
gi 518292796  85 TPVAELSRADAE 96
Cdd:PRK13452  85 ERAENLNQAEAE 96
atpC PRK13450
F0F1 ATP synthase subunit epsilon; Provisional
 2-101 3.27e-08

F0F1 ATP synthase subunit epsilon; Provisional


Pssm-ID: 184059 [Multi-domain]  Cd Length: 132  Bit Score: 48.99  E-value: 3.27e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518292796   2 ADTFNLELVSPEKLLLSRPVEMVTIPAWEGEMGILPKHAPMIVALRGGLIKVREGGRDTESLFVAGGFAEITPDRVTVLA 81
Cdd:PRK13450   1 ANNIKLTILTPEKNFYIGEVKEVITEGLDGDIAILPNHVPLITYLKPTITKIIDENGEKKKIFTSSGVLKVENNEVYILC 80

                         90       100
                 ....*....|....*....|....*..
gi 518292796  82 DEA-------TPVAELSRADAESRLTQ 101
Cdd:PRK13450  81 DASewpeeidIKRAENAKKRAEERLRK 107
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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