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Conserved domains on  [gi|517055227|ref|WP_018244045|]
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aldose epimerase family protein [Rhizobium leguminosarum]

Protein Classification

aldose epimerase family protein( domain architecture ID 10173257)

aldose epimerase family protein similar to Homo sapiens galactose mutarotase, which catalyzes the interconversion of beta-D-galactose and alpha-D-galactose during galactose metabolism

CATH:  2.70.98.10
EC:  5.1.3.-
Gene Ontology:  GO:0016857|GO:0030246|GO:0005975
PubMed:  12717027
SCOP:  4000040

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
galactose_mutarotase_like cd09019
galactose mutarotase_like; Galactose mutarotase catalyzes the conversion of beta-D-galactose ...
25-337 9.05e-142

galactose mutarotase_like; Galactose mutarotase catalyzes the conversion of beta-D-galactose to alpha-D-galactose. Beta-D-galactose is produced by the degradation of lactose, a disaccharide composed of beta-D-glucose and beta-D-galactose. This epimerization reaction is the first step in the four-step Leloir pathway, which converts galactose into metabolically important glucose. This epimerization step is followed by the phosophorylation of alpha-D-galactose by galactokinase, an enzyme which can only act on the alpha anomer. A glutamate and a histidine residue of the galactose mutarotase have been shown to be critical for catalysis, the glutamate serves as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen. Galactose mutarotase is a member of the aldose-1-epimerase superfamily.


:

Pssm-ID: 185696  Cd Length: 326  Bit Score: 404.20  E-value: 9.05e-142
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517055227  25 KGGGLTAKIISWGAVIQDLRL---EGHDAPLQLGFDDFDSYPLYSSYFGATPGRCANRVGGGRFTLDDKDYQLELNeNGV 101
Cdd:cd09019    6 NGNGLRVSILNYGATIQSLKVpdkNGKLRDVVLGFDDLEDYLKNSPYFGATVGRVANRIANGRFTLDGKTYQLEAN-EGP 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517055227 102 THLHGGSDNIAKRNWTIVEHDVDRVVLKIVDPDGRAGYPGNCTIQATFWVHGNGELSITYESTSDQPTLANVCQHAYFNL 181
Cdd:cd09019   85 NHLHGGPKGFDKRVWDVEEVEENSVTFSLVSPDGEEGFPGNLTVTVTYTLTDDNELTIEYEATTDKPTPVNLTNHSYFNL 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517055227 182 DGRD--DALGHDIMIAADHYLPTDEKQVPTGEIRSVEGTEFDFREMAPMKRFVGSEQA-----FYDHNFCLSAERTAKRS 254
Cdd:cd09019  165 AGEGsgDILDHELQINADRYLPVDEELIPTGEILPVAGTPFDFRKPKPIGRIDLDDEQlklggGYDHNFVLDKGGGKLRP 244
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517055227 255 VALARSLYSGVSLEVRSTEPGVQFYAGFKLDtGAPGIGGRKYGPFAGFCLETQVWPDSINHQGFPNAVLRPGEVLRQETD 334
Cdd:cd09019  245 AARLTSPESGRKLEVYTTQPGVQFYTGNFLD-GTPGGGGKVYGKRSGFCLETQHFPDAPNHPNFPSIILRPGETYRHTTV 323

                 ...
gi 517055227 335 YIF 337
Cdd:cd09019  324 YRF 326
 
Name Accession Description Interval E-value
galactose_mutarotase_like cd09019
galactose mutarotase_like; Galactose mutarotase catalyzes the conversion of beta-D-galactose ...
25-337 9.05e-142

galactose mutarotase_like; Galactose mutarotase catalyzes the conversion of beta-D-galactose to alpha-D-galactose. Beta-D-galactose is produced by the degradation of lactose, a disaccharide composed of beta-D-glucose and beta-D-galactose. This epimerization reaction is the first step in the four-step Leloir pathway, which converts galactose into metabolically important glucose. This epimerization step is followed by the phosophorylation of alpha-D-galactose by galactokinase, an enzyme which can only act on the alpha anomer. A glutamate and a histidine residue of the galactose mutarotase have been shown to be critical for catalysis, the glutamate serves as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen. Galactose mutarotase is a member of the aldose-1-epimerase superfamily.


Pssm-ID: 185696  Cd Length: 326  Bit Score: 404.20  E-value: 9.05e-142
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517055227  25 KGGGLTAKIISWGAVIQDLRL---EGHDAPLQLGFDDFDSYPLYSSYFGATPGRCANRVGGGRFTLDDKDYQLELNeNGV 101
Cdd:cd09019    6 NGNGLRVSILNYGATIQSLKVpdkNGKLRDVVLGFDDLEDYLKNSPYFGATVGRVANRIANGRFTLDGKTYQLEAN-EGP 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517055227 102 THLHGGSDNIAKRNWTIVEHDVDRVVLKIVDPDGRAGYPGNCTIQATFWVHGNGELSITYESTSDQPTLANVCQHAYFNL 181
Cdd:cd09019   85 NHLHGGPKGFDKRVWDVEEVEENSVTFSLVSPDGEEGFPGNLTVTVTYTLTDDNELTIEYEATTDKPTPVNLTNHSYFNL 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517055227 182 DGRD--DALGHDIMIAADHYLPTDEKQVPTGEIRSVEGTEFDFREMAPMKRFVGSEQA-----FYDHNFCLSAERTAKRS 254
Cdd:cd09019  165 AGEGsgDILDHELQINADRYLPVDEELIPTGEILPVAGTPFDFRKPKPIGRIDLDDEQlklggGYDHNFVLDKGGGKLRP 244
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517055227 255 VALARSLYSGVSLEVRSTEPGVQFYAGFKLDtGAPGIGGRKYGPFAGFCLETQVWPDSINHQGFPNAVLRPGEVLRQETD 334
Cdd:cd09019  245 AARLTSPESGRKLEVYTTQPGVQFYTGNFLD-GTPGGGGKVYGKRSGFCLETQHFPDAPNHPNFPSIILRPGETYRHTTV 323

                 ...
gi 517055227 335 YIF 337
Cdd:cd09019  324 YRF 326
GalM COG2017
Galactose mutarotase or related enzyme [Carbohydrate transport and metabolism];
21-338 1.30e-94

Galactose mutarotase or related enzyme [Carbohydrate transport and metabolism];


Pssm-ID: 441620 [Multi-domain]  Cd Length: 309  Bit Score: 283.71  E-value: 1.30e-94
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517055227  21 RVVIKGGGLTAKIISWGAVIQDLRLEGHD-APLQLGFDDFDSYPLySSYFGATPGRCANRVGGGRFTLDDKDYQLELNEN 99
Cdd:COG2017    9 LYTLENGGLRAVIPEYGATLTSLRVPDKDgRDVLLGFDDLEDDPP-WAYGGAILGPYANRIADGRFTLDGKTYQLPINEG 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517055227 100 GvTHLHGGSDniaKRNWTIVEHDVDRVVLKIVDPDGrAGYPGNCTIQATFWVHGNGeLSITYE--STSDQPTLANVCQHA 177
Cdd:COG2017   88 P-NALHGGAR---DRPWEVEEQSEDSVTLSLTSPDE-EGYPGNLELTVTYTLTDNG-LTITYTatNLGDKPTPFNLGNHP 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517055227 178 YFNLDGRD--DALGHDIMIAADHYLPTDEKQVPTGEIRSVEGTEFDFREMAPMKrfvgseQAFYDHNFC-LSAERtakRS 254
Cdd:COG2017  162 YFNLPGEGggDIDDHRLQIPADEYLPVDEGLIPTGELAPVAGTPFDFREPRPLG------DGGFDHAFVgLDSDG---RP 232
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517055227 255 VALARSLYSGVSLEVRSTE-PGVQFYAGFKLDTGAPgiggrkygpfaGFCLETQVWP-DSINHQGF-PNAVLRPGEVLRQ 331
Cdd:COG2017  233 AARLTDPDSGRRLEVSTDEfPGLQVYTGNFLDPGRD-----------GVCLEPQTGPpDAPNHPGFeGLIVLAPGETYSA 301

                 ....*..
gi 517055227 332 ETDYIFT 338
Cdd:COG2017  302 TTRIRFS 308
galM_Leloir TIGR02636
galactose mutarotase; Members of this protein family act as galactose mutarotase (D-galactose ...
28-337 2.38e-92

galactose mutarotase; Members of this protein family act as galactose mutarotase (D-galactose 1-epimerase) and participate in the Leloir pathway for galactose/glucose interconversion. All members of the seed alignment for this model are found in gene clusters with other enzymes of the Leloir pathway. This enzyme family belongs to the aldose 1-epimerase family, described by pfam01263. However, the enzyme described as aldose 1-epimerase itself (EC 5.1.3.3) is called broadly specific for D-glucose, L-arabinose, D-xylose, D-galactose, maltose and lactose. The restricted genome context for genes in this family suggests members should act primarily on D-galactose.


Pssm-ID: 274240  Cd Length: 336  Bit Score: 278.86  E-value: 2.38e-92
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517055227   28 GLTAKIISWGAVIQDLR--LEGHDAPLQLGFDDFDSYPLYSSYFGATPGRCANRVGGGRFTLDDKDYQLELNEnGVTHLH 105
Cdd:TIGR02636  14 GMTISFMDIGATWLSCQvpLAGELREVLLGFASAEEYLKQDAYLGATVGRYANRIANGSFEIDGKTYQLSINQ-GPNCLH 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517055227  106 GGSDNIAKRNWTIVEH--DVDRVVLKIVDPDGRAGYPGNCTIQATFWVHGNGELSITYESTSDQPTLANVCQHAYFNLDG 183
Cdd:TIGR02636  93 GGPEGFDKRRWTIETLeqAEVQVKFSLESPDGDQGFPGNLTVSVTYTLTDDNELKIDYEATTDKATPFNLTNHVYFNLDG 172
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517055227  184 RD---DALGHDIMIAADHYLPTDEKQVPTGEIRSVEGTEFDFREMAPMK-RFVGSEQ----AFYDHNFCLSAERTAKRSV 255
Cdd:TIGR02636 173 ADagsDVLNHELQLNADRYLPLDEEGIPLGQLKPVDGTSFDFRKEKAIGqDFLANDQqqlaKGYDHAFLLNGERLDGKEA 252
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517055227  256 ALARSLYSGVSLEVRSTEPGVQFYAGFKLDtGAPGIGGRKYGPFAGFCLETQVWPDSINHQGF--PNAVLRPGEVLRQET 333
Cdd:TIGR02636 253 ARLTSPDEDLSLEVFTNQPALQIYTGNFLA-GTPNRGGKKYVDHAGIALETQFLPDSPNHPEWgdISCILSPGQEYQHQT 331

                  ....
gi 517055227  334 DYIF 337
Cdd:TIGR02636 332 RYQF 335
galM PRK11055
galactose-1-epimerase; Provisional
28-337 4.02e-86

galactose-1-epimerase; Provisional


Pssm-ID: 182931  Cd Length: 342  Bit Score: 262.94  E-value: 4.02e-86
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517055227  28 GLTAKIISWGAVIQDLRLEGHDAPLQ---LGFDDFDSYPLYSSYFGATPGRCANRVGGGRFTLDDKDYQLELNEnGVTHL 104
Cdd:PRK11055  19 GMVVTLMDWGATWLSCRVPLSDGSVRevlLGCASPEDYPDQAAYLGASVGRYANRIANSRFTLDGETYQLSPNQ-GGNQL 97
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517055227 105 HGGSDNIAKRNWTIVEHDVDRVVLKIVDPDGRAGYPGNCTIQATFWVHGNGELSITYESTSDQPTLANVCQHAYFNLDGR 184
Cdd:PRK11055  98 HGGPEGFDKRRWQIVNQNDRQVTFSLSSPDGDQGFPGNLGATVTYRLTDDNRVSITYRATVDKPCPVNLTNHAYFNLDGA 177
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517055227 185 D---DALGHDIMIAADHYLPTDEKQVPTGEIRSVEGTEFDFREMAPMKR-FVGSEQ----AFYDHNFCLSAERTAKRSVA 256
Cdd:PRK11055 178 EegsDVRNHKLQINADEYLPVDEGGIPNGGLKSVAGTSFDFRQPKTIAQdFLADDDqqkvKGYDHAFLLQAKGDGKKPAA 257
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517055227 257 LARSLYSGVSLEVRSTEPGVQFYAGFKLdTGAPGIGGRKYGPFAGFCLETQVWPDSINHQ--GFPNAVLRPGEVLRQETD 334
Cdd:PRK11055 258 HLWSPDEKLQMKVYTTAPALQFYSGNFL-AGTPSRGGGPYADYAGLALESQFLPDSPNHPewPQPDCILKPGEEYRSLTE 336

                 ...
gi 517055227 335 YIF 337
Cdd:PRK11055 337 YQF 339
Aldose_epim pfam01263
Aldose 1-epimerase;
20-335 1.80e-82

Aldose 1-epimerase;


Pssm-ID: 396013  Cd Length: 300  Bit Score: 252.32  E-value: 1.80e-82
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517055227   20 YRVVIK-GGGLTAKIISWGAVIQDLRLEGHDAPLQLGFDDFDSYPLYSSYFGATPGRCANRVGGGRFTLDDKDYQLELNE 98
Cdd:pfam01263   1 DLITLTnGNGLSATISLYGATLLSLKVPGKLREVLLGSDDAEGYLKDSNYFGATLGPYANRIANGRFELDGIPYCLPQNG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517055227   99 NGVTHLHGGsdnIAKRNWTIVEH--DVDRVVLKIVDPDGRAGYPGNCTIQATFWVHGNGELSITYESTSD-QPTLANVCQ 175
Cdd:pfam01263  81 PGKNPLHGG---ARGRIWEVEEVkpDDGVTVTLVLDPDGEEGYPGDLEARVTYTLNEDNELTIEYEATNDgKPTPFNLGN 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517055227  176 HAYFNLDGrdDALGHDIMIAADHYLPTDEKQVPTGEIRSVEGTEFDFREMAPmkrfVGSEQAFYDHNFCLsaerTAKRSV 255
Cdd:pfam01263 158 HPYFNLSG--DIDIHELQIEADEYLEVDDDLIPTGELKDVKGTPFDFRQPTP----IGEDILGYDHVYLL----DPLKAV 227
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517055227  256 ALARSLYSGVSLEVRSTEPGVQFYagfkldtgAPGIGGRKYGPFAGFCLETQVWPDSINHQGFPNAVLRPGEVLRQETDY 335
Cdd:pfam01263 228 IIDPDPGSGIVLEVSTTQPGLVVY--------TPNFLKGKYLSDEGFALETQFLPDEPNHPEFPSIILKPGESYTAETSY 299
 
Name Accession Description Interval E-value
galactose_mutarotase_like cd09019
galactose mutarotase_like; Galactose mutarotase catalyzes the conversion of beta-D-galactose ...
25-337 9.05e-142

galactose mutarotase_like; Galactose mutarotase catalyzes the conversion of beta-D-galactose to alpha-D-galactose. Beta-D-galactose is produced by the degradation of lactose, a disaccharide composed of beta-D-glucose and beta-D-galactose. This epimerization reaction is the first step in the four-step Leloir pathway, which converts galactose into metabolically important glucose. This epimerization step is followed by the phosophorylation of alpha-D-galactose by galactokinase, an enzyme which can only act on the alpha anomer. A glutamate and a histidine residue of the galactose mutarotase have been shown to be critical for catalysis, the glutamate serves as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen. Galactose mutarotase is a member of the aldose-1-epimerase superfamily.


Pssm-ID: 185696  Cd Length: 326  Bit Score: 404.20  E-value: 9.05e-142
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517055227  25 KGGGLTAKIISWGAVIQDLRL---EGHDAPLQLGFDDFDSYPLYSSYFGATPGRCANRVGGGRFTLDDKDYQLELNeNGV 101
Cdd:cd09019    6 NGNGLRVSILNYGATIQSLKVpdkNGKLRDVVLGFDDLEDYLKNSPYFGATVGRVANRIANGRFTLDGKTYQLEAN-EGP 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517055227 102 THLHGGSDNIAKRNWTIVEHDVDRVVLKIVDPDGRAGYPGNCTIQATFWVHGNGELSITYESTSDQPTLANVCQHAYFNL 181
Cdd:cd09019   85 NHLHGGPKGFDKRVWDVEEVEENSVTFSLVSPDGEEGFPGNLTVTVTYTLTDDNELTIEYEATTDKPTPVNLTNHSYFNL 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517055227 182 DGRD--DALGHDIMIAADHYLPTDEKQVPTGEIRSVEGTEFDFREMAPMKRFVGSEQA-----FYDHNFCLSAERTAKRS 254
Cdd:cd09019  165 AGEGsgDILDHELQINADRYLPVDEELIPTGEILPVAGTPFDFRKPKPIGRIDLDDEQlklggGYDHNFVLDKGGGKLRP 244
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517055227 255 VALARSLYSGVSLEVRSTEPGVQFYAGFKLDtGAPGIGGRKYGPFAGFCLETQVWPDSINHQGFPNAVLRPGEVLRQETD 334
Cdd:cd09019  245 AARLTSPESGRKLEVYTTQPGVQFYTGNFLD-GTPGGGGKVYGKRSGFCLETQHFPDAPNHPNFPSIILRPGETYRHTTV 323

                 ...
gi 517055227 335 YIF 337
Cdd:cd09019  324 YRF 326
GalM COG2017
Galactose mutarotase or related enzyme [Carbohydrate transport and metabolism];
21-338 1.30e-94

Galactose mutarotase or related enzyme [Carbohydrate transport and metabolism];


Pssm-ID: 441620 [Multi-domain]  Cd Length: 309  Bit Score: 283.71  E-value: 1.30e-94
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517055227  21 RVVIKGGGLTAKIISWGAVIQDLRLEGHD-APLQLGFDDFDSYPLySSYFGATPGRCANRVGGGRFTLDDKDYQLELNEN 99
Cdd:COG2017    9 LYTLENGGLRAVIPEYGATLTSLRVPDKDgRDVLLGFDDLEDDPP-WAYGGAILGPYANRIADGRFTLDGKTYQLPINEG 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517055227 100 GvTHLHGGSDniaKRNWTIVEHDVDRVVLKIVDPDGrAGYPGNCTIQATFWVHGNGeLSITYE--STSDQPTLANVCQHA 177
Cdd:COG2017   88 P-NALHGGAR---DRPWEVEEQSEDSVTLSLTSPDE-EGYPGNLELTVTYTLTDNG-LTITYTatNLGDKPTPFNLGNHP 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517055227 178 YFNLDGRD--DALGHDIMIAADHYLPTDEKQVPTGEIRSVEGTEFDFREMAPMKrfvgseQAFYDHNFC-LSAERtakRS 254
Cdd:COG2017  162 YFNLPGEGggDIDDHRLQIPADEYLPVDEGLIPTGELAPVAGTPFDFREPRPLG------DGGFDHAFVgLDSDG---RP 232
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517055227 255 VALARSLYSGVSLEVRSTE-PGVQFYAGFKLDTGAPgiggrkygpfaGFCLETQVWP-DSINHQGF-PNAVLRPGEVLRQ 331
Cdd:COG2017  233 AARLTDPDSGRRLEVSTDEfPGLQVYTGNFLDPGRD-----------GVCLEPQTGPpDAPNHPGFeGLIVLAPGETYSA 301

                 ....*..
gi 517055227 332 ETDYIFT 338
Cdd:COG2017  302 TTRIRFS 308
galM_Leloir TIGR02636
galactose mutarotase; Members of this protein family act as galactose mutarotase (D-galactose ...
28-337 2.38e-92

galactose mutarotase; Members of this protein family act as galactose mutarotase (D-galactose 1-epimerase) and participate in the Leloir pathway for galactose/glucose interconversion. All members of the seed alignment for this model are found in gene clusters with other enzymes of the Leloir pathway. This enzyme family belongs to the aldose 1-epimerase family, described by pfam01263. However, the enzyme described as aldose 1-epimerase itself (EC 5.1.3.3) is called broadly specific for D-glucose, L-arabinose, D-xylose, D-galactose, maltose and lactose. The restricted genome context for genes in this family suggests members should act primarily on D-galactose.


Pssm-ID: 274240  Cd Length: 336  Bit Score: 278.86  E-value: 2.38e-92
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517055227   28 GLTAKIISWGAVIQDLR--LEGHDAPLQLGFDDFDSYPLYSSYFGATPGRCANRVGGGRFTLDDKDYQLELNEnGVTHLH 105
Cdd:TIGR02636  14 GMTISFMDIGATWLSCQvpLAGELREVLLGFASAEEYLKQDAYLGATVGRYANRIANGSFEIDGKTYQLSINQ-GPNCLH 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517055227  106 GGSDNIAKRNWTIVEH--DVDRVVLKIVDPDGRAGYPGNCTIQATFWVHGNGELSITYESTSDQPTLANVCQHAYFNLDG 183
Cdd:TIGR02636  93 GGPEGFDKRRWTIETLeqAEVQVKFSLESPDGDQGFPGNLTVSVTYTLTDDNELKIDYEATTDKATPFNLTNHVYFNLDG 172
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517055227  184 RD---DALGHDIMIAADHYLPTDEKQVPTGEIRSVEGTEFDFREMAPMK-RFVGSEQ----AFYDHNFCLSAERTAKRSV 255
Cdd:TIGR02636 173 ADagsDVLNHELQLNADRYLPLDEEGIPLGQLKPVDGTSFDFRKEKAIGqDFLANDQqqlaKGYDHAFLLNGERLDGKEA 252
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517055227  256 ALARSLYSGVSLEVRSTEPGVQFYAGFKLDtGAPGIGGRKYGPFAGFCLETQVWPDSINHQGF--PNAVLRPGEVLRQET 333
Cdd:TIGR02636 253 ARLTSPDEDLSLEVFTNQPALQIYTGNFLA-GTPNRGGKKYVDHAGIALETQFLPDSPNHPEWgdISCILSPGQEYQHQT 331

                  ....
gi 517055227  334 DYIF 337
Cdd:TIGR02636 332 RYQF 335
galM PRK11055
galactose-1-epimerase; Provisional
28-337 4.02e-86

galactose-1-epimerase; Provisional


Pssm-ID: 182931  Cd Length: 342  Bit Score: 262.94  E-value: 4.02e-86
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517055227  28 GLTAKIISWGAVIQDLRLEGHDAPLQ---LGFDDFDSYPLYSSYFGATPGRCANRVGGGRFTLDDKDYQLELNEnGVTHL 104
Cdd:PRK11055  19 GMVVTLMDWGATWLSCRVPLSDGSVRevlLGCASPEDYPDQAAYLGASVGRYANRIANSRFTLDGETYQLSPNQ-GGNQL 97
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517055227 105 HGGSDNIAKRNWTIVEHDVDRVVLKIVDPDGRAGYPGNCTIQATFWVHGNGELSITYESTSDQPTLANVCQHAYFNLDGR 184
Cdd:PRK11055  98 HGGPEGFDKRRWQIVNQNDRQVTFSLSSPDGDQGFPGNLGATVTYRLTDDNRVSITYRATVDKPCPVNLTNHAYFNLDGA 177
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517055227 185 D---DALGHDIMIAADHYLPTDEKQVPTGEIRSVEGTEFDFREMAPMKR-FVGSEQ----AFYDHNFCLSAERTAKRSVA 256
Cdd:PRK11055 178 EegsDVRNHKLQINADEYLPVDEGGIPNGGLKSVAGTSFDFRQPKTIAQdFLADDDqqkvKGYDHAFLLQAKGDGKKPAA 257
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517055227 257 LARSLYSGVSLEVRSTEPGVQFYAGFKLdTGAPGIGGRKYGPFAGFCLETQVWPDSINHQ--GFPNAVLRPGEVLRQETD 334
Cdd:PRK11055 258 HLWSPDEKLQMKVYTTAPALQFYSGNFL-AGTPSRGGGPYADYAGLALESQFLPDSPNHPewPQPDCILKPGEEYRSLTE 336

                 ...
gi 517055227 335 YIF 337
Cdd:PRK11055 337 YQF 339
Aldose_epim pfam01263
Aldose 1-epimerase;
20-335 1.80e-82

Aldose 1-epimerase;


Pssm-ID: 396013  Cd Length: 300  Bit Score: 252.32  E-value: 1.80e-82
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517055227   20 YRVVIK-GGGLTAKIISWGAVIQDLRLEGHDAPLQLGFDDFDSYPLYSSYFGATPGRCANRVGGGRFTLDDKDYQLELNE 98
Cdd:pfam01263   1 DLITLTnGNGLSATISLYGATLLSLKVPGKLREVLLGSDDAEGYLKDSNYFGATLGPYANRIANGRFELDGIPYCLPQNG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517055227   99 NGVTHLHGGsdnIAKRNWTIVEH--DVDRVVLKIVDPDGRAGYPGNCTIQATFWVHGNGELSITYESTSD-QPTLANVCQ 175
Cdd:pfam01263  81 PGKNPLHGG---ARGRIWEVEEVkpDDGVTVTLVLDPDGEEGYPGDLEARVTYTLNEDNELTIEYEATNDgKPTPFNLGN 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517055227  176 HAYFNLDGrdDALGHDIMIAADHYLPTDEKQVPTGEIRSVEGTEFDFREMAPmkrfVGSEQAFYDHNFCLsaerTAKRSV 255
Cdd:pfam01263 158 HPYFNLSG--DIDIHELQIEADEYLEVDDDLIPTGELKDVKGTPFDFRQPTP----IGEDILGYDHVYLL----DPLKAV 227
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517055227  256 ALARSLYSGVSLEVRSTEPGVQFYagfkldtgAPGIGGRKYGPFAGFCLETQVWPDSINHQGFPNAVLRPGEVLRQETDY 335
Cdd:pfam01263 228 IIDPDPGSGIVLEVSTTQPGLVVY--------TPNFLKGKYLSDEGFALETQFLPDEPNHPEFPSIILKPGESYTAETSY 299
PLN00194 PLN00194
aldose 1-epimerase; Provisional
24-338 1.21e-79

aldose 1-epimerase; Provisional


Pssm-ID: 215098 [Multi-domain]  Cd Length: 337  Bit Score: 246.51  E-value: 1.21e-79
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517055227  24 IKGGGLTAKIISWGAVIQDLRL---EGHDAPLQLGFDDFDSYPLYSSYFGATPGRCANRVGGGRFTLDDKDYQLELNeNG 100
Cdd:PLN00194  14 LKNGNISVKLTNYGATITSLILpdkNGKLADVVLGFDSVEPYKNDSPYFGAIVGRVANRIKGAKFTLNGVTYKLPPN-NG 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517055227 101 VTHLHGGSDNIAKRNWTIVEHDVDR---VVLKIVDPDGRAGYPGNCTIQATFWVHGNGELSITYESTS-DQPTLANVCQH 176
Cdd:PLN00194  93 PNSLHGGPKGFSKVVWEVAKYKKGEkpsITFKYHSFDGEEGFPGDLSVTVTYTLLSSNTLRLDMEAKPlNKATPVNLAQH 172
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517055227 177 AYFNLDGRD--DALGHDIMIAADHYLPTDEKQVPTGEIRSVEGTEFDFREMAPMKRFVGSEQAFYDHNFCLSAERTAK-R 253
Cdd:PLN00194 173 TYWNLAGHNsgDILSHKIQIFGSHITPVDENLIPTGEILPVKGTPFDFTTPKKIGSRINELPKGYDHNYVLDGEEKEGlK 252
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517055227 254 SVALARSLYSGVSLEVRSTEPGVQFYAGFKLDtGAPGIGGRKYGPFAGFCLETQVWPDSINHQGFPNAVLRPGEVLRQET 333
Cdd:PLN00194 253 KAAKVKDPKSGRVLELWTNAPGMQFYTSNYVN-GVKGKGGAVYGKHAGLCLETQGFPDAVNQPNFPSVVVNPGEKYKHTM 331

                 ....*
gi 517055227 334 DYIFT 338
Cdd:PLN00194 332 LFEFS 336
Aldose_epim cd01081
aldose 1-epimerase superfamily; Aldose 1-epimerases or mutarotases are key enzymes of ...
29-331 2.75e-32

aldose 1-epimerase superfamily; Aldose 1-epimerases or mutarotases are key enzymes of carbohydrate metabolism; they catalyze the interconversion of the alpha- and beta-anomers of hexose sugars such as glucose and galactose. This interconversion is an important step that allows anomer specific metabolic conversion of sugars. Studies of the catalytic mechanism of the best known member of the family, galactose mutarotase, have shown a glutamate and a histidine residue to be critical for catalysis; the glutamate serves as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate and the histidine as the active site acid to protonate the C-5 ring oxygen.


Pssm-ID: 185695 [Multi-domain]  Cd Length: 284  Bit Score: 121.80  E-value: 2.75e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517055227  29 LTAKIISWGAVIQDLRLeGHDAPLQLGFDDFDSYPLYSS-YFGATPGRCANRVGGGRFTLDDKDYQLELNENGVtHLHGG 107
Cdd:cd01081    1 AVAVIAPRGANIISLKV-KGDVDLLWGYPDAEEYPLAPTgGGGAILFPFANRISDGRYTFDGKQYPLNEDEGGN-AIHGF 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517055227 108 sdnIAKRNWTIVEHDVD--RVVLKIVDPDGRAGYPGNCTIQATFWVHGNG-ELSITYESTSDQPTLANVCQHAYFNLDGR 184
Cdd:cd01081   79 ---VRNLPWRVVATDEEeaSVTLSYDLNDGPGGYPFPLELTVTYTLDADTlTITFTVTNLGDEPMPFGLGWHPYFGLPGV 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517055227 185 DDAlGHDIMIAADHYLPTDEKQVPTGEIRSVEGTEFDFRemapmkRFVGSEQafYDHNFCLSaERTAKRSVALARSLYSG 264
Cdd:cd01081  156 AIE-DLRLRVPASKVLPLDDLLPPTGELEVPGEEDFRLG------RPLGGGE--LDDCFLLL-GNDAGTAEARLEDPDSR 225
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 517055227 265 VSLEVRSTEPGVQFYAGfkldtgapgiggrKYGPFAGFCLETQVWPdsinhqgfPNAVLRPGEVLRQ 331
Cdd:cd01081  226 ISVEFETGWPFWQVYTG-------------DGGRRGSVAIEPMTSA--------PDAFFNNNGGLIT 271
PTZ00485 PTZ00485
aldolase 1-epimerase; Provisional
68-333 5.57e-29

aldolase 1-epimerase; Provisional


Pssm-ID: 240435  Cd Length: 376  Bit Score: 114.71  E-value: 5.57e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517055227  68 YFGATPGRCANRVGGGRFTLDDKDYQLELNEnGVTHLHGGSDNIAKRNW---TIVEHDVDRVVLKIVDPDGRAGYPGNCT 144
Cdd:PTZ00485  67 YMGATVGRCAGRVAGGVFTLDGVKYYTQKNR-GENTCHCGDDAYHKKHWgmkLIETANVIGVRFNYTSPHMENGFPGELV 145
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517055227 145 IQATFWVHGNGE--LSITYES--TSDQP---TLANVCQHAYFNL------DGRDDAL--------GHDIMIAADHYLPTD 203
Cdd:PTZ00485 146 SKVTYSIERSKPnvLKTIYDSyiPETSPadaTPVNIFNHAYWNLngiperNGKKNAVwvqpesvrNHWLRVPASRVAEAD 225
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517055227 204 EKQVPTGEIRSVEGTEFDFREmapmKRFVGS----------EQAFYDHNFCLSAERTAKRSV-ALARSLYSGVSLEVRST 272
Cdd:PTZ00485 226 RMAIPTGEFLSVEGTGLDFRQ----GRVIGDciddvalldrDPCGYDHPLAIDGWEKGKLMLhAEAKSPVTNICMKVYST 301
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 517055227 273 EPGVQFYAGFKLDTGAPGIGGRKYGPFAGFCLETQVWPDSINH-QGFPNAVLRPGEVLRQET 333
Cdd:PTZ00485 302 FPCMWVYTANNKPLPASGGPGQRYARWTGMGLEPQYFPDVANHyPKYPSCIVRRGERRFTET 363
Aldose_epim_Ec_YihR cd09022
Aldose 1-epimerase, similar to Escherichia coli YihR; Proteins similar to Escherichia coli ...
30-294 6.88e-21

Aldose 1-epimerase, similar to Escherichia coli YihR; Proteins similar to Escherichia coli YihR are uncharacterized members of aldose-1-epimerase superfamily. Aldose 1-epimerases or mutarotases are key enzymes of carbohydrate metabolism, catalyzing the interconversion of the alpha- and beta-anomers of hexose sugars such as glucose and galactose. This interconversion is an important step that allows anomer specific metabolic conversion of sugars. Studies of the catalytic mechanism of the best known member of the family, galactose mutarotase, have shown a glutamate and a histidine residue to be critical for catalysis; the glutamate serves as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen.


Pssm-ID: 185699  Cd Length: 284  Bit Score: 90.71  E-value: 6.88e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517055227  30 TAKIISWGAVIQDLRLEGHdaPLQLGFDDFDSYPLYSsyfGAT----PgrcaNRVGGGRFTLDDKDYQLELNE--NGvTH 103
Cdd:cd09022    2 RAVVTEVGAGLRSLTVGGR--DLVEPYPADEVPPGAA---GQVlapwP----NRIADGRYTFDGVEHQLPITEpeRG-NA 71
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517055227 104 LHG-GSDniakRNWTIVEHDVDRVVLKiVDPDGRAGYPGNCTIQATFWVHGNGeLSITYEST--SDQPTLANVCQHAYFN 180
Cdd:cd09022   72 IHGlVRW----ADWQLVEHTDSSVTLR-TRIPPQPGYPFTLELTVTYELDDDG-LTVTLTATnvGDEPAPFGVGFHPYLS 145
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517055227 181 LDGR--DDALGHdimIAADHYLPTDEKQVPTGEiRSVEGTEFDFREMAPMkrfvgsEQAFYDHNFCLSAERTAKRSVA-L 257
Cdd:cd09022  146 AGGAplDECTLT---LPADTWLPVDERLLPTGT-EPVAGTPYDFRTGRRL------GGTALDTAFTDLTRDADGRARArL 215
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 517055227 258 ARSLYSGVSLEVRSTEPGVQFYAGfklDTGAPGIGGR 294
Cdd:cd09022  216 TGPDGRGVELWADESFPWVQVFTA---DTLPPPGRRR 249
Aldose_epim_Ec_YphB cd09021
aldose 1-epimerase, similar to Escherichia coli YphB; Proteins similar to Escherichia coli ...
35-243 2.36e-12

aldose 1-epimerase, similar to Escherichia coli YphB; Proteins similar to Escherichia coli YphB are uncharacterized members of the aldose-1-epimerase superfamily. Aldose 1-epimerases or mutarotases are key enzymes of carbohydrate metabolism, catalyzing the interconversion of the alpha- and beta-anomers of hexose sugars such as glucose and galactose. This interconversion is an important step that allows anomer specific metabolic conversion of sugars. Studies of the catalytic mechanism of the best known member of the family, galactose mutarotase, have shown a glutamate and a histidine residue to be critical for catalysis; the glutamate serves as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen.


Pssm-ID: 185698  Cd Length: 273  Bit Score: 66.16  E-value: 2.36e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517055227  35 SWGAVIQDLRLEGHDAPL--QLGFDDFD-----SYPL--YSsyfgatpgrcaNRVGGGRFTLDDKDYQLELNENGVTH-L 104
Cdd:cd09021    7 ELGGSIAALTSRGDPTPLlrPADPDAADalamaCFPLvpFS-----------NRIRGGRFLFAGREVALPPNTADEPHpL 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517055227 105 HGgsdNIAKRNWTIVEHDVDRVVLKIVDPDGRAGYPGNCTIqaTFWVHGNG---ELSITYESTSDQPtlANVCQHAYFNL 181
Cdd:cd09021   76 HG---DGWRRPWQVVAASADSAELQLDHEADDPPWAYRAEQ--RFHLAGDGlsiTLSVTNRGDRPMP--AGLGFHPYFPR 148
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 517055227 182 DGRDdalghDIMIAADHYLPTDEKQVPTGEIRSVEgtEFDFREMAPMKRfvgseqAFYDHNF 243
Cdd:cd09021  149 TPDT-----RLQADADGVWLEDEDHLPTGLRPHPP--DWDFSQPRPLPD------RWIDNCF 197
PRK15172 PRK15172
aldose-1-epimerase;
78-284 2.21e-11

aldose-1-epimerase;


Pssm-ID: 237918  Cd Length: 300  Bit Score: 63.68  E-value: 2.21e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517055227  78 NRVGGGRFTLDDKDYQLELNEN-GVTHLHGgsdNIAKRNWTIVEHDVDRVVLKIVDPDGRaGYPGNCTIQATFWVHGNGE 156
Cdd:PRK15172  64 NRIANGCYRYQGQEYQLPINEHvSKAAIHG---LLAWRDWQISELTATSVTLTAFLPPSY-GYPFMLASQVIYSLDAATG 139
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517055227 157 LS--ITYESTSDQPTLANVCQHAYF--NLDGRDDALghdIMIAADHYLPTDEKQVPTGEIRSVEgTEFDFRemapMKRFV 232
Cdd:PRK15172 140 LSveIASQNIGDVPAPYGVGIHPYLtcNLTSVDEYL---LQLPANQVLAVDEHANPTTLHHVDE-LDLDFS----QAKKI 211
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|..
gi 517055227 233 GSEQafYDHNFCLSAERTAKRSVALARSLysgvSLEVRSTEPGVQFYAGFKL 284
Cdd:PRK15172 212 AATK--IDHTFKTANDLWEVRITHPQQAL----SVSLCSDQPWLQIYSGEKL 257
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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