View
Concise Results
Standard Results
Full Results
type I glutamate--ammonia ligase [Sandarakinorhabdus sp. AAP62]
Protein Classification
glutamine synthetase family protein ( domain architecture ID 1000788 )
glutamine synthetase family protein such as glutamine synthetase that catalyzes the condensation of glutamate and ammonia to form glutamine
List of domain hits
Name
Accession
Description
Interval
E-value
glnA super family
cl32375 glutamate--ammonia ligase;
3-468
0e+00
glutamate--ammonia ligase;
PRK09469 :Pssm-ID: 181884 [Multi-domain]
Cd Length: 469
Bit Score: 722.71
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516263541 3 T A ADI L A M IK E K E IEW VDLRFTD P KGK W QH L T MVSSVIDE D MLND G F MFDGSSI A GWK A INESDM I LMPD LDATYI DPF S 82
Cdd:PRK09469 2 S A EHV L T M LN E H E VKF VDLRFTD T KGK E QH V T IPAHQVNA D FFEE G K MFDGSSI G GWK G INESDM V LMPD ASTAVL DPF F 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516263541 83 ATPMM I LV CDI V EP S T G Q L Y G RDPRS T AKR G E A YL KAS GI G DTV YV GPE A EFF V FDD V RFG LGYNEGFFHL DDIE LPT NS 162
Cdd:PRK09469 82 EDSTL I IR CDI L EP G T M Q G Y D RDPRS I AKR A E D YL RST GI A DTV LF GPE P EFF L FDD I RFG SSISGSHVAI DDIE AAW NS 161
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516263541 163 G RQ YE Q GN MA HRP RA KGGYFP CA PVDS AV D L R AE M VAT M L EMGL PCDK HHHEVA S A - Q H E LGLT F GKLVET AD RM Q V YKY 241
Cdd:PRK09469 162 G TK YE G GN KG HRP GV KGGYFP VP PVDS SQ D I R SA M CLV M E EMGL VVEA HHHEVA T A g Q N E VATR F NTMTKK AD EI Q I YKY 241
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516263541 242 VVH Q VAHA Y GKTATFMPKP IKD DNGSGMH T H L S IWNGKTP LFAGD Q YAGLSE M AL FF IGGIIKHAKA C NA FT NP G TNSYK 321
Cdd:PRK09469 242 VVH N VAHA F GKTATFMPKP MFG DNGSGMH C H M S LSKNGVN LFAGD K YAGLSE Q AL YY IGGIIKHAKA I NA LA NP T TNSYK 321
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516263541 322 RLVPG F EAPV L LAYS S RNRSAS C RIP YGTGA K SK R V EVRFPD AL ANPYL AYT ALLMAGLDGI E N R IHPG P AMDKNLYDLP 401
Cdd:PRK09469 322 RLVPG Y EAPV M LAYS A RNRSAS I RIP VVASP K AR R I EVRFPD PA ANPYL CFA ALLMAGLDGI K N K IHPG E AMDKNLYDLP 401
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 516263541 402 P R E LKKV P T V CA SL R EAL A ALD KS R AVF T K GGVFTDD Q ID S YI E L KM EEV L R WE MTP A PVEF DM YYS 468
Cdd:PRK09469 402 P E E AAEI P Q V AG SL E EAL N ALD AD R EFL T A GGVFTDD A ID A YI A L RR EEV D R VR MTP H PVEF EL YYS 468
Name
Accession
Description
Interval
E-value
glnA
PRK09469 glutamate--ammonia ligase;
3-468
0e+00
glutamate--ammonia ligase;
Pssm-ID: 181884 [Multi-domain]
Cd Length: 469
Bit Score: 722.71
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516263541 3 T A ADI L A M IK E K E IEW VDLRFTD P KGK W QH L T MVSSVIDE D MLND G F MFDGSSI A GWK A INESDM I LMPD LDATYI DPF S 82
Cdd:PRK09469 2 S A EHV L T M LN E H E VKF VDLRFTD T KGK E QH V T IPAHQVNA D FFEE G K MFDGSSI G GWK G INESDM V LMPD ASTAVL DPF F 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516263541 83 ATPMM I LV CDI V EP S T G Q L Y G RDPRS T AKR G E A YL KAS GI G DTV YV GPE A EFF V FDD V RFG LGYNEGFFHL DDIE LPT NS 162
Cdd:PRK09469 82 EDSTL I IR CDI L EP G T M Q G Y D RDPRS I AKR A E D YL RST GI A DTV LF GPE P EFF L FDD I RFG SSISGSHVAI DDIE AAW NS 161
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516263541 163 G RQ YE Q GN MA HRP RA KGGYFP CA PVDS AV D L R AE M VAT M L EMGL PCDK HHHEVA S A - Q H E LGLT F GKLVET AD RM Q V YKY 241
Cdd:PRK09469 162 G TK YE G GN KG HRP GV KGGYFP VP PVDS SQ D I R SA M CLV M E EMGL VVEA HHHEVA T A g Q N E VATR F NTMTKK AD EI Q I YKY 241
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516263541 242 VVH Q VAHA Y GKTATFMPKP IKD DNGSGMH T H L S IWNGKTP LFAGD Q YAGLSE M AL FF IGGIIKHAKA C NA FT NP G TNSYK 321
Cdd:PRK09469 242 VVH N VAHA F GKTATFMPKP MFG DNGSGMH C H M S LSKNGVN LFAGD K YAGLSE Q AL YY IGGIIKHAKA I NA LA NP T TNSYK 321
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516263541 322 RLVPG F EAPV L LAYS S RNRSAS C RIP YGTGA K SK R V EVRFPD AL ANPYL AYT ALLMAGLDGI E N R IHPG P AMDKNLYDLP 401
Cdd:PRK09469 322 RLVPG Y EAPV M LAYS A RNRSAS I RIP VVASP K AR R I EVRFPD PA ANPYL CFA ALLMAGLDGI K N K IHPG E AMDKNLYDLP 401
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 516263541 402 P R E LKKV P T V CA SL R EAL A ALD KS R AVF T K GGVFTDD Q ID S YI E L KM EEV L R WE MTP A PVEF DM YYS 468
Cdd:PRK09469 402 P E E AAEI P Q V AG SL E EAL N ALD AD R EFL T A GGVFTDD A ID A YI A L RR EEV D R VR MTP H PVEF EL YYS 468
GlnA
TIGR00653 glutamine synthetase, type I; Alternate name: glutamate--ammonia ligase. This model represents ...
6-468
0e+00
glutamine synthetase, type I; Alternate name: glutamate--ammonia ligase. This model represents the dodecameric form, which can be subdivided into 1-alpha and 1-beta forms. The phylogeny of the 1-alpha and 1-beta forms appears polyphyletic. E. coli, Synechocystis PCC6803, Aquifex aeolicus, and the crenarcheon Sulfolobus acidocaldarius have form 1-beta, while Bacillus subtilis, Thermotoga maritima, and various euryarchaea has form 1-alpha. The 1-beta dodecamer from the crenarcheon Sulfolobus acidocaldarius differs from that in E. coli in that it is not regulated by adenylylation. [Amino acid biosynthesis, Glutamate family]
Pssm-ID: 273198 [Multi-domain]
Cd Length: 459
Bit Score: 651.35
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516263541 6 DILAM IKE KEIEW VDLRFTD P KGK W QH LTMVS S VI D EDMLND G F MFDGSSI A G WKA I N ESDM I L M PD LDATY IDP FS A TP 85
Cdd:TIGR00653 2 EVFKL IKE ENVKF VDLRFTD I KGK P QH VEIPA S AL D KEAFEE G I MFDGSSI R G FQG I E ESDM L L K PD PSTAV IDP WR A EK 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516263541 86 MMILV CD IV EP S TG QL Y G RDPRS T AKR G E A YLK a SGIGDT V Y V GPE A EFF V FD D V R FG LGY N EG F FHL D DI E LPT N S grq 165
Cdd:TIGR00653 82 TLRVI CD VY EP F TG EP Y E RDPRS I AKR A E E YLK - SGIGDT A Y F GPE P EFF L FD S V E FG SLA N GS F YEV D SE E GRW N E --- 157
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516263541 166 y E Q GN MAHR PR A KGGYFP C AP V D S AVD L R A EMV ATMLEM G LPCDK HHHEVA SA QHE LGLT F GK L VE TAD RM Q V YKYVV HQ 245
Cdd:TIGR00653 158 - E S GN RGYK PR D KGGYFP V AP T D T AVD I R R EMV LYLEQL G FDVEV HHHEVA TG QHE IDFK F DT L LK TAD DI Q T YKYVV KN 236
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516263541 246 VA HAY GKTATFMPKP IKD DNGSGMH T H L S I W NGKTP LFAG DQ YAGLSE M AL FF IGGI I KHAKA CN AFTNP GT NSYKRLVP 325
Cdd:TIGR00653 237 VA RKH GKTATFMPKP LFG DNGSGMH C H Q S L W KDGEN LFAG EE YAGLSE T AL YY IGGI L KHAKA LA AFTNP TV NSYKRLVP 316
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516263541 326 G F EAPV L LAYS S RNRSA SC RIP YGTGA K S KR V E V RFPD AL ANPYLA YT A L LMAGLDGI E N R I H PG PAM DKNLY D L P P R EL 405
Cdd:TIGR00653 317 G Y EAPV Y LAYS A RNRSA LI RIP ASGNP K A KR I E F RFPD PS ANPYLA FA A M LMAGLDGI K N K I D PG EPV DKNLY E L S P E EL 396
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 516263541 406 KK -- V P TVCA SL R EAL AA L DKSRA V ft K GGVF TDDQ I DSY IELK ME E VLRWEMT P A P V EF DM YY S 468
Cdd:TIGR00653 397 RE kg I P QLPG SL E EAL DE L ESDHL V -- E GGVF GEEF I EAF IELK RK E WDPYRLR P H P W EF EL YY D 459
GlnA
COG0174 Glutamine synthetase [Amino acid transport and metabolism]; Glutamine synthetase is part of ...
1-468
0e+00
Glutamine synthetase [Amino acid transport and metabolism]; Glutamine synthetase is part of the Pathway/BioSystem: Glutamine biosynthesis
Pssm-ID: 439944 [Multi-domain]
Cd Length: 440
Bit Score: 616.34
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516263541 1 M T -- T AADI LA MI KE KEIEW VDL R FTD PK G KWQHLTMVS S VI d E DM L ND G FM FDGSSI A G WKA I N ESDM I L M PD LDATY I 78
Cdd:COG0174 1 M S kl T VEEV LA FL KE RGVKF VDL Q FTD IN G VLRGKRVPA S EL - E KA L EE G IG FDGSSI E G FVE I G ESDM V L V PD PSTLR I 79
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516263541 79 D P FSAT P MMILV CD IVE P s T G QL Y GR DPR STA KR GE A Y L KAS G I gd T V YVGPE A EFF V FDD vrfglgy NEG ffhlddiel 158
Cdd:COG0174 80 L P WRPE P TARVI CD VYD P - D G EP Y EG DPR NVL KR VL A R L AET G L -- T P YVGPE L EFF L FDD ------- DSD --------- 140
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516263541 159 ptnsgrqy E Q GN MAH RPR A KGGY FPC AP V D SAV D L R A E M V ATMLE MG L P CDKH HHEVA SA QHE LG L TFGKLVET ADR MQV 238
Cdd:COG0174 141 -------- E K GN RGL RPR D KGGY YDL AP L D RFE D F R R E I V LALEA MG I P VETS HHEVA PG QHE IN L RYADALTA ADR VVL 212
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516263541 239 Y KYVV HQ VA HAY G K TATFMPKP IKD DNGSGMH T H L S I W N - GKTP LFA G - D Q YAGLSE M A LF FIGG II KHA K A CN AFT N P G 316
Cdd:COG0174 213 F KYVV KE VA RRH G L TATFMPKP FAG DNGSGMH V H Q S L W D a DGKN LFA D p D G YAGLSE L A RH FIGG LL KHA P A LT AFT A P T 292
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516263541 317 T NSYKRLVPG F EAPV LL A YSSR NRSA SC RIP y G TGA K SK R V E V R F PDA L ANPYLA YT ALL M AGLDGIEN RIH PG PAM D K N 396
Cdd:COG0174 293 V NSYKRLVPG Y EAPV NI A WGYD NRSA AI RIP - G GSP K AT R I E Y R V PDA D ANPYLA FA ALL A AGLDGIEN KLE PG EPV D G N 371
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 516263541 397 L Y D L P P R E LKKV P TVCA SL R EAL A AL DKSRAV ftk GG V FTD D QI D S YI E LK ME E VLRWEMTPA P V E FDM Y YS 468
Cdd:COG0174 372 A Y E L S P E E RAGI P RLPR SL E EAL D AL EADEFL --- RE V LGE D FV D H YI A LK RA E WEEFRRRVT P W E RER Y LE 440
Gln-synt_C
pfam00120 Glutamine synthetase, catalytic domain;
104-466
5.34e-178
Glutamine synthetase, catalytic domain;
Pssm-ID: 425473 [Multi-domain]
Cd Length: 343
Bit Score: 501.73
E-value: 5.34e-178
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516263541 104 RDPRS TA KR GE A Y L KAS G I gd T V YVGPE A EFF V FD D V RF G l GY N EG F FHL D dielptnsgrqyeq GNMAH RP RA KGGYF P 183
Cdd:pfam00120 1 RDPRS IL KR AL A R L ASL G L -- T A YVGPE L EFF L FD R V ED G - NP N GP F YPP D -------------- SEGGY RP AD KGGYF D 63
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516263541 184 C APVDSA V DLR A E M V ATMLE MG LPCDKH HHEVA SA QHE LGLT F GKLVET AD RM Q VY KYVV HQ VA HAY G K TATFMPKP IKD 263
Cdd:pfam00120 64 V APVDSA Q DLR R E I V DALEA MG IEVEAS HHEVA PG QHE IDFR F DDALKA AD NA Q TF KYVV KN VA RKH G L TATFMPKP FFG 143
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516263541 264 DNGSGMH T H L S I W NGKTP LFA G - D QYA GLSE M A LF FI G GI I KHA K A CN A F TNP GT NSYKRLVPG F EAPV L LA YSS RNRSA 342
Cdd:pfam00120 144 DNGSGMH V H Q S L W KDGKN LFA D p D GEY GLSE T A RH FI A GI L KHA P A LT A L TNP TV NSYKRLVPG Y EAPV Y LA WGA RNRSA 223
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516263541 343 SC RIP Y G t GA K SK RVEVR F PD AL ANPYLA YT ALL M AGLDGIEN R I H PG PAM D K NLY D L P P R E L K KV PT VCA SL R EAL A AL 422
Cdd:pfam00120 224 AL RIP A G - SP K AR RVEVR S PD PD ANPYLA FA ALL A AGLDGIEN K I D PG EPV D G NLY E L T P E E R K GI PT LPS SL E EAL D AL 302
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 516263541 423 DKS r AVFTK gg VFTDDQ I DS YI EL K ME E VLRWEMTPA P V EF DM Y 466
Cdd:pfam00120 303 EED - ELLKE -- ALGEHF I EA YI AV K RA E WEEFRTAVH P W EF ER Y 343
Name
Accession
Description
Interval
E-value
glnA
PRK09469 glutamate--ammonia ligase;
3-468
0e+00
glutamate--ammonia ligase;
Pssm-ID: 181884 [Multi-domain]
Cd Length: 469
Bit Score: 722.71
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516263541 3 T A ADI L A M IK E K E IEW VDLRFTD P KGK W QH L T MVSSVIDE D MLND G F MFDGSSI A GWK A INESDM I LMPD LDATYI DPF S 82
Cdd:PRK09469 2 S A EHV L T M LN E H E VKF VDLRFTD T KGK E QH V T IPAHQVNA D FFEE G K MFDGSSI G GWK G INESDM V LMPD ASTAVL DPF F 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516263541 83 ATPMM I LV CDI V EP S T G Q L Y G RDPRS T AKR G E A YL KAS GI G DTV YV GPE A EFF V FDD V RFG LGYNEGFFHL DDIE LPT NS 162
Cdd:PRK09469 82 EDSTL I IR CDI L EP G T M Q G Y D RDPRS I AKR A E D YL RST GI A DTV LF GPE P EFF L FDD I RFG SSISGSHVAI DDIE AAW NS 161
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516263541 163 G RQ YE Q GN MA HRP RA KGGYFP CA PVDS AV D L R AE M VAT M L EMGL PCDK HHHEVA S A - Q H E LGLT F GKLVET AD RM Q V YKY 241
Cdd:PRK09469 162 G TK YE G GN KG HRP GV KGGYFP VP PVDS SQ D I R SA M CLV M E EMGL VVEA HHHEVA T A g Q N E VATR F NTMTKK AD EI Q I YKY 241
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516263541 242 VVH Q VAHA Y GKTATFMPKP IKD DNGSGMH T H L S IWNGKTP LFAGD Q YAGLSE M AL FF IGGIIKHAKA C NA FT NP G TNSYK 321
Cdd:PRK09469 242 VVH N VAHA F GKTATFMPKP MFG DNGSGMH C H M S LSKNGVN LFAGD K YAGLSE Q AL YY IGGIIKHAKA I NA LA NP T TNSYK 321
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516263541 322 RLVPG F EAPV L LAYS S RNRSAS C RIP YGTGA K SK R V EVRFPD AL ANPYL AYT ALLMAGLDGI E N R IHPG P AMDKNLYDLP 401
Cdd:PRK09469 322 RLVPG Y EAPV M LAYS A RNRSAS I RIP VVASP K AR R I EVRFPD PA ANPYL CFA ALLMAGLDGI K N K IHPG E AMDKNLYDLP 401
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 516263541 402 P R E LKKV P T V CA SL R EAL A ALD KS R AVF T K GGVFTDD Q ID S YI E L KM EEV L R WE MTP A PVEF DM YYS 468
Cdd:PRK09469 402 P E E AAEI P Q V AG SL E EAL N ALD AD R EFL T A GGVFTDD A ID A YI A L RR EEV D R VR MTP H PVEF EL YYS 468
GlnA
TIGR00653 glutamine synthetase, type I; Alternate name: glutamate--ammonia ligase. This model represents ...
6-468
0e+00
glutamine synthetase, type I; Alternate name: glutamate--ammonia ligase. This model represents the dodecameric form, which can be subdivided into 1-alpha and 1-beta forms. The phylogeny of the 1-alpha and 1-beta forms appears polyphyletic. E. coli, Synechocystis PCC6803, Aquifex aeolicus, and the crenarcheon Sulfolobus acidocaldarius have form 1-beta, while Bacillus subtilis, Thermotoga maritima, and various euryarchaea has form 1-alpha. The 1-beta dodecamer from the crenarcheon Sulfolobus acidocaldarius differs from that in E. coli in that it is not regulated by adenylylation. [Amino acid biosynthesis, Glutamate family]
Pssm-ID: 273198 [Multi-domain]
Cd Length: 459
Bit Score: 651.35
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516263541 6 DILAM IKE KEIEW VDLRFTD P KGK W QH LTMVS S VI D EDMLND G F MFDGSSI A G WKA I N ESDM I L M PD LDATY IDP FS A TP 85
Cdd:TIGR00653 2 EVFKL IKE ENVKF VDLRFTD I KGK P QH VEIPA S AL D KEAFEE G I MFDGSSI R G FQG I E ESDM L L K PD PSTAV IDP WR A EK 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516263541 86 MMILV CD IV EP S TG QL Y G RDPRS T AKR G E A YLK a SGIGDT V Y V GPE A EFF V FD D V R FG LGY N EG F FHL D DI E LPT N S grq 165
Cdd:TIGR00653 82 TLRVI CD VY EP F TG EP Y E RDPRS I AKR A E E YLK - SGIGDT A Y F GPE P EFF L FD S V E FG SLA N GS F YEV D SE E GRW N E --- 157
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516263541 166 y E Q GN MAHR PR A KGGYFP C AP V D S AVD L R A EMV ATMLEM G LPCDK HHHEVA SA QHE LGLT F GK L VE TAD RM Q V YKYVV HQ 245
Cdd:TIGR00653 158 - E S GN RGYK PR D KGGYFP V AP T D T AVD I R R EMV LYLEQL G FDVEV HHHEVA TG QHE IDFK F DT L LK TAD DI Q T YKYVV KN 236
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516263541 246 VA HAY GKTATFMPKP IKD DNGSGMH T H L S I W NGKTP LFAG DQ YAGLSE M AL FF IGGI I KHAKA CN AFTNP GT NSYKRLVP 325
Cdd:TIGR00653 237 VA RKH GKTATFMPKP LFG DNGSGMH C H Q S L W KDGEN LFAG EE YAGLSE T AL YY IGGI L KHAKA LA AFTNP TV NSYKRLVP 316
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516263541 326 G F EAPV L LAYS S RNRSA SC RIP YGTGA K S KR V E V RFPD AL ANPYLA YT A L LMAGLDGI E N R I H PG PAM DKNLY D L P P R EL 405
Cdd:TIGR00653 317 G Y EAPV Y LAYS A RNRSA LI RIP ASGNP K A KR I E F RFPD PS ANPYLA FA A M LMAGLDGI K N K I D PG EPV DKNLY E L S P E EL 396
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 516263541 406 KK -- V P TVCA SL R EAL AA L DKSRA V ft K GGVF TDDQ I DSY IELK ME E VLRWEMT P A P V EF DM YY S 468
Cdd:TIGR00653 397 RE kg I P QLPG SL E EAL DE L ESDHL V -- E GGVF GEEF I EAF IELK RK E WDPYRLR P H P W EF EL YY D 459
GlnA
COG0174 Glutamine synthetase [Amino acid transport and metabolism]; Glutamine synthetase is part of ...
1-468
0e+00
Glutamine synthetase [Amino acid transport and metabolism]; Glutamine synthetase is part of the Pathway/BioSystem: Glutamine biosynthesis
Pssm-ID: 439944 [Multi-domain]
Cd Length: 440
Bit Score: 616.34
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516263541 1 M T -- T AADI LA MI KE KEIEW VDL R FTD PK G KWQHLTMVS S VI d E DM L ND G FM FDGSSI A G WKA I N ESDM I L M PD LDATY I 78
Cdd:COG0174 1 M S kl T VEEV LA FL KE RGVKF VDL Q FTD IN G VLRGKRVPA S EL - E KA L EE G IG FDGSSI E G FVE I G ESDM V L V PD PSTLR I 79
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516263541 79 D P FSAT P MMILV CD IVE P s T G QL Y GR DPR STA KR GE A Y L KAS G I gd T V YVGPE A EFF V FDD vrfglgy NEG ffhlddiel 158
Cdd:COG0174 80 L P WRPE P TARVI CD VYD P - D G EP Y EG DPR NVL KR VL A R L AET G L -- T P YVGPE L EFF L FDD ------- DSD --------- 140
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516263541 159 ptnsgrqy E Q GN MAH RPR A KGGY FPC AP V D SAV D L R A E M V ATMLE MG L P CDKH HHEVA SA QHE LG L TFGKLVET ADR MQV 238
Cdd:COG0174 141 -------- E K GN RGL RPR D KGGY YDL AP L D RFE D F R R E I V LALEA MG I P VETS HHEVA PG QHE IN L RYADALTA ADR VVL 212
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516263541 239 Y KYVV HQ VA HAY G K TATFMPKP IKD DNGSGMH T H L S I W N - GKTP LFA G - D Q YAGLSE M A LF FIGG II KHA K A CN AFT N P G 316
Cdd:COG0174 213 F KYVV KE VA RRH G L TATFMPKP FAG DNGSGMH V H Q S L W D a DGKN LFA D p D G YAGLSE L A RH FIGG LL KHA P A LT AFT A P T 292
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516263541 317 T NSYKRLVPG F EAPV LL A YSSR NRSA SC RIP y G TGA K SK R V E V R F PDA L ANPYLA YT ALL M AGLDGIEN RIH PG PAM D K N 396
Cdd:COG0174 293 V NSYKRLVPG Y EAPV NI A WGYD NRSA AI RIP - G GSP K AT R I E Y R V PDA D ANPYLA FA ALL A AGLDGIEN KLE PG EPV D G N 371
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 516263541 397 L Y D L P P R E LKKV P TVCA SL R EAL A AL DKSRAV ftk GG V FTD D QI D S YI E LK ME E VLRWEMTPA P V E FDM Y YS 468
Cdd:COG0174 372 A Y E L S P E E RAGI P RLPR SL E EAL D AL EADEFL --- RE V LGE D FV D H YI A LK RA E WEEFRRRVT P W E RER Y LE 440
Gln-synt_C
pfam00120 Glutamine synthetase, catalytic domain;
104-466
5.34e-178
Glutamine synthetase, catalytic domain;
Pssm-ID: 425473 [Multi-domain]
Cd Length: 343
Bit Score: 501.73
E-value: 5.34e-178
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516263541 104 RDPRS TA KR GE A Y L KAS G I gd T V YVGPE A EFF V FD D V RF G l GY N EG F FHL D dielptnsgrqyeq GNMAH RP RA KGGYF P 183
Cdd:pfam00120 1 RDPRS IL KR AL A R L ASL G L -- T A YVGPE L EFF L FD R V ED G - NP N GP F YPP D -------------- SEGGY RP AD KGGYF D 63
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516263541 184 C APVDSA V DLR A E M V ATMLE MG LPCDKH HHEVA SA QHE LGLT F GKLVET AD RM Q VY KYVV HQ VA HAY G K TATFMPKP IKD 263
Cdd:pfam00120 64 V APVDSA Q DLR R E I V DALEA MG IEVEAS HHEVA PG QHE IDFR F DDALKA AD NA Q TF KYVV KN VA RKH G L TATFMPKP FFG 143
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516263541 264 DNGSGMH T H L S I W NGKTP LFA G - D QYA GLSE M A LF FI G GI I KHA K A CN A F TNP GT NSYKRLVPG F EAPV L LA YSS RNRSA 342
Cdd:pfam00120 144 DNGSGMH V H Q S L W KDGKN LFA D p D GEY GLSE T A RH FI A GI L KHA P A LT A L TNP TV NSYKRLVPG Y EAPV Y LA WGA RNRSA 223
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516263541 343 SC RIP Y G t GA K SK RVEVR F PD AL ANPYLA YT ALL M AGLDGIEN R I H PG PAM D K NLY D L P P R E L K KV PT VCA SL R EAL A AL 422
Cdd:pfam00120 224 AL RIP A G - SP K AR RVEVR S PD PD ANPYLA FA ALL A AGLDGIEN K I D PG EPV D G NLY E L T P E E R K GI PT LPS SL E EAL D AL 302
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 516263541 423 DKS r AVFTK gg VFTDDQ I DS YI EL K ME E VLRWEMTPA P V EF DM Y 466
Cdd:pfam00120 303 EED - ELLKE -- ALGEHF I EA YI AV K RA E WEEFRTAVH P W EF ER Y 343
gln_synth_III
TIGR03105 glutamine synthetase, type III; This family consists of the type III isozyme of glutamine ...
9-466
1.08e-77
glutamine synthetase, type III; This family consists of the type III isozyme of glutamine synthetase, originally described in Rhizobium meliloti, where types I and II also occur.
Pssm-ID: 274431 [Multi-domain]
Cd Length: 435
Bit Score: 248.82
E-value: 1.08e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516263541 9 A MIKE K E I EWVDLR F T D ---- P K G K wqh L TMVSSV id ED M LND G FM F D G SSIA G W - KAINES D MILM PDLD ATYID P FS a 83
Cdd:TIGR03105 3 A LARD K G I KYFLAS F V D lhgv Q K A K --- L VPAEAI -- DH M ATG G AG F A G FAAW G L g QSPADP D LMAI PDLD SLTQL P WQ - 76
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516263541 84 t P MMIL V - C D IV ep ST G QL Y GRD PR STA KR GE A yl K A SGI G D T VYV G P E A EFF VFD dv R FGL G YNEGFFHL D DIEL P T ns 162
Cdd:TIGR03105 77 - P GVAW V a A D LH -- VN G KP Y PQA PR VVL KR QL A -- E A AEL G L T LNT G V E C EFF LLR -- R DED G SLSIADRA D TLAK P C -- 147
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516263541 163 grq Y E Q GNMAH R prakggyfpcapvdsa V D LRA E MVAT M LEM G LPCDKHH HE V A SA Q H E LGL T FGKLVE TADR MQVYK Y V 242
Cdd:TIGR03105 148 --- Y D Q RGLMR R ---------------- Y D VLT E ISDA M NAL G WDPYQND HE D A NG Q F E MNF T YADALT TADR HAFFR Y M 208
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516263541 243 V HQV A HAY G KT ATFMPKP IK D DN G S G M H T HLS I W NGK - TP LFA G D QY --- A GLS EM A LF FIGGI IK HA K A CN A FTN P GT N 318
Cdd:TIGR03105 209 V KEI A EKH G MR ATFMPKP FA D LT G N G C H F HLS L W DED g RN LFA D D SD png L GLS KL A YH FIGGI LH HA P A LC A VLA P TV N 288
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516263541 319 SYKRL V ----- P G FE - AP VLLA Y SSR NR SASC RIP - Y G tgaksk R V E V R FP D AL ANPYLA YT A L L M AGLDGIE NRIH PGP 391
Cdd:TIGR03105 289 SYKRL N aprtt S G AT w AP NFIS Y GGN NR THMV RIP d P G ------ R F E L R LA D GA ANPYLA QA A I L A AGLDGIE RKLD PGP 362
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 516263541 392 AM D K NLY -- D L PP R ELKKV P tvc AS L R EAL A AL DKS r AVFT kg GVFTDDQI D SYIE LK ME E VLRWEMTPAPV E F D M Y 466
Cdd:TIGR03105 363 PR D I NLY ae E L AA R GVETL P --- QN L L EAL R AL EAD - PLLA -- EALGAEFV D EFLK LK RQ E WEEYHRHVSDW E I D R Y 433
Gln-synt_N
pfam03951 Glutamine synthetase, beta-Grasp domain;
15-96
2.27e-39
Glutamine synthetase, beta-Grasp domain;
Pssm-ID: 427610 [Multi-domain]
Cd Length: 82
Bit Score: 136.88
E-value: 2.27e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516263541 15 EIEW VDLRFTD PK GK WQ H L T MVS S VI DED MLND G FM FDGSSI A G WKA I N ESDM I L M PD LDATY IDPF SAT P MMILV CD IV 94
Cdd:pfam03951 1 NVKF VDLRFTD IL GK LK H V T IPA S EL DED AFEE G IG FDGSSI E G FAR I E ESDM L L K PD PSTAF IDPF RPE P TARVI CD VY 80
..
gi 516263541 95 E P 96
Cdd:pfam03951 81 D P 82
PLN02284
PLN02284 glutamine synthetase
51-376
5.69e-13
glutamine synthetase
Pssm-ID: 177922 [Multi-domain]
Cd Length: 354
Bit Score: 70.11
E-value: 5.69e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516263541 51 F DGSS i A G WKAINE S DM IL M P D ld A TYI DPF SATPMMILV CD IVE P ST gqlygr D P RS T A KR --- GEAYLKASGIGDTVY 127
Cdd:PLN02284 55 Y DGSS - T G QAPGED S EV IL Y P Q -- A IFK DPF RGGNNILVM CD AYT P AG ------ E P IP T N KR aka AKIFSHPDVAAEEPW 125
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516263541 128 V G P E A E FFVFD - DV RFG LG YNE G FF hlddielptnsgrqyeqgnmahr P RAK G G Y FPCAPV D S A V -- D LRAEMVATM L EM 204
Cdd:PLN02284 126 Y G I E Q E YTLLQ k DV KWP LG WPV G GY ----------------------- P GPQ G P Y YCGVGA D K A F gr D IVDAHYKAC L YA 182
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516263541 205 G LPCDKHHH EV ASA Q H E -- L G LTF G kl VETA D RMQ V YK Y VVHQVAHAY G KTAT F M PKPI KD D - NG S G M HT HL S IWNGKTP 281
Cdd:PLN02284 183 G INISGING EV MPG Q W E fq V G PVV G -- ISAG D QLW V AR Y ILERITEIA G VVVS F D PKPI PG D w NG A G A HT NY S TKSMRED 260
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516263541 282 lfagdqy A G LSEM -- A LFFI G gi IK H AKACN A F tnp G TNSYK RL VPGF E APVLLAY S S -- R NR S AS C R IPYG T GAKS K - R 356
Cdd:PLN02284 261 ------- G G YEVI kk A IEKL G -- LR H KEHIA A Y --- G EGNER RL TGKH E TADINTF S W gv A NR G AS I R VGRD T EKEG K g Y 328
330 340
....*....|....*....|....*
gi 516263541 357 V E V R F P DALAN PY ----- L A Y T AL L 376
Cdd:PLN02284 329 F E D R R P ASNMD PY vvtsm I A E T TI L 353
PLN03036
PLN03036 glutamine synthetase; Provisional
51-376
4.85e-10
glutamine synthetase; Provisional
Pssm-ID: 178603 [Multi-domain]
Cd Length: 432
Bit Score: 61.53
E-value: 4.85e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516263541 51 F DGSS i A G WKAINE S DM IL M P D ld A TYI DPF SATPMMILV CD IVE P ST gqlygr D P RS T A KR --- G E AYLKASGIGDTVY 127
Cdd:PLN03036 115 Y DGSS - T G QAPGED S EV IL Y P Q -- A IFK DPF RGGNNILVI CD TYT P AG ------ E P IP T N KR hra A E IFSNKKVVDEVPW 185
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516263541 128 V G P E A E FFVFD - D V RFG LG YNE G FF hlddielptnsgrqyeqgnmahr P RAK G G Y FPC A PV D SAV -- D LRAEMVATM L EM 204
Cdd:PLN03036 186 F G I E Q E YTLLQ q N V KWP LG WPV G AY ----------------------- P GPQ G P Y YCG A GA D KSF gr D ISDAHYKAC L YA 242
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516263541 205 G LPCDKHHH EV ASA Q H E -- L G LTF G kl VETA D RMQVYK Y VVHQVAHAY G KTA T FM PKPI KD D - NG S G M HT HL S IWNGK tp 281
Cdd:PLN03036 243 G INISGTNG EV MPG Q W E yq V G PSV G -- IDAG D HIWCSR Y ILERITEQA G VVL T LD PKPI EG D w NG A G C HT NY S TKSMR -- 318
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516263541 282 lfagd QYA G LSEMALFFIGGIIK H AKACN A F tnp G TNSYK RL VPGF E APVLLAY S -- SR NR SA S C R IPYG T GA K S K - RV E 358
Cdd:PLN03036 319 ----- EEG G FEVIKKAILNLSLR H KEHIS A Y --- G EGNER RL TGKH E TASIDTF S wg VA NR GC S I R VGRD T EK K G K g YL E 390
330
....*....|....*...
gi 516263541 359 V R F P DALAN PY LA y T A LL 376
Cdd:PLN03036 391 D R R P ASNMD PY IV - T S LL 407
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
