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Conserved domains on  [gi|516238931|ref|WP_017642894|]
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MULTISPECIES: nitroreductase family protein [Pseudomonas]

Protein Classification

nitroreductase family protein( domain architecture ID 10790284)

nitroreductase family protein similar to nitroreductase, which catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and nitroimidazoles

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
FMR2 COG3560
Fatty acid repression mutant protein (predicted oxidoreductase) [General function prediction ...
4-199 3.67e-133

Fatty acid repression mutant protein (predicted oxidoreductase) [General function prediction only];


:

Pssm-ID: 442781  Cd Length: 196  Bit Score: 371.06  E-value: 3.67e-133
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516238931   4 AFIDTIKRRRSQYALGKNLPLAQDQVTALIQEAVKLSPSAFNSQSSRAVILFGAESDKFWGFVMQALRQIVPADAFAATE 83
Cdd:COG3560    1 DFLEAIKNRRSIYALGKNLPISDEEIEEIIKEAVKHTPSAFNSQSSRVVVLFGEEHDKLWDITKETLRKIVPAEAFAPTE 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516238931  84 GKINSFAAGAGTVLFYEDRHVVAGLQDKYPAYADNFPIWSEQASGIAQFSVWTALANAGIGASLQHYNPLPDALAAAEWQ 163
Cdd:COG3560   81 EKINSFAAGYGTVLFFEDQDVVKGLQEQFPLYADNFPVWSEQSSGMAQYAVWTALAEEGIGASLQHYNPLIDEAVAKEWN 160
                        170       180       190
                 ....*....|....*....|....*....|....*.
gi 516238931 164 LPETWHLRAQMPFGSNEGDFPEKGFMDDAERFRVFG 199
Cdd:COG3560  161 IPASWKLRAQMPFGSIEAPAGEKEFIPDEERFKVFK 196
 
Name Accession Description Interval E-value
FMR2 COG3560
Fatty acid repression mutant protein (predicted oxidoreductase) [General function prediction ...
4-199 3.67e-133

Fatty acid repression mutant protein (predicted oxidoreductase) [General function prediction only];


Pssm-ID: 442781  Cd Length: 196  Bit Score: 371.06  E-value: 3.67e-133
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516238931   4 AFIDTIKRRRSQYALGKNLPLAQDQVTALIQEAVKLSPSAFNSQSSRAVILFGAESDKFWGFVMQALRQIVPADAFAATE 83
Cdd:COG3560    1 DFLEAIKNRRSIYALGKNLPISDEEIEEIIKEAVKHTPSAFNSQSSRVVVLFGEEHDKLWDITKETLRKIVPAEAFAPTE 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516238931  84 GKINSFAAGAGTVLFYEDRHVVAGLQDKYPAYADNFPIWSEQASGIAQFSVWTALANAGIGASLQHYNPLPDALAAAEWQ 163
Cdd:COG3560   81 EKINSFAAGYGTVLFFEDQDVVKGLQEQFPLYADNFPVWSEQSSGMAQYAVWTALAEEGIGASLQHYNPLIDEAVAKEWN 160
                        170       180       190
                 ....*....|....*....|....*....|....*.
gi 516238931 164 LPETWHLRAQMPFGSNEGDFPEKGFMDDAERFRVFG 199
Cdd:COG3560  161 IPASWKLRAQMPFGSIEAPAGEKEFIPDEERFKVFK 196
Frm2-like cd02140
nitroreductase family protein; A subfamily of the nitroreductase family containing ...
5-196 9.96e-104

nitroreductase family protein; A subfamily of the nitroreductase family containing uncharacterized proteins that are similar to nitroreductase. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and nitroimidazoles. This process requires NAD(P)H as electron donor in an obligatory two-electron transfer and uses FMN as cofactor. The enzyme is typically a homodimer. Members of this family are also called NADH dehydrogenase, oxygen-insensitive NAD(P)H nitrogenase or dihydropteridine reductase.


Pssm-ID: 380317  Cd Length: 192  Bit Score: 296.52  E-value: 9.96e-104
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516238931   5 FIDTIKRRRSQYALGKNLPLAQDQVTALIQEAVKLSPSAFNSQSSRAVILFGAESDKFWGFVMQALRQIVPADAFAATEG 84
Cdd:cd02140    1 FLEAAKARRTIYALGKNSPVSDEEIEEIVKEAVKHVPSSFNSQSSRAVILLGDEHKKLWDIVKDTLRPLVPAEAFEATKE 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516238931  85 KINSFAAGAGTVLFYEDRHVVAGLQDKYPAYADNFPIWSEQASGIAQFSVWTALANAGIGASLQHYNPLPDALAAAEWQL 164
Cdd:cd02140   81 KLNGFKAGYGTVLFFEDQDVVKGLQEQFPAYADNFPVWSEQSSGMAQIAVWTALALEGIGANLQHYNPLIDAAVAKKWNI 160
                        170       180       190
                 ....*....|....*....|....*....|..
gi 516238931 165 PETWHLRAQMPFGSNEGDFPEKGFMDDAERFR 196
Cdd:cd02140  161 PSNWKLRAQLVFGSPEAPPGEKTFIPDEDRVK 192
Nitroreductase pfam00881
Nitroreductase family; The nitroreductase family comprises a group of FMN- or FAD-dependent ...
9-177 5.23e-16

Nitroreductase family; The nitroreductase family comprises a group of FMN- or FAD-dependent and NAD(P)H-dependent enzymes able to metabolize nitrosubstituted compounds.


Pssm-ID: 425926 [Multi-domain]  Cd Length: 168  Bit Score: 72.04  E-value: 5.23e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516238931    9 IKRRRSQYALGKNlPLAQDQVTALIqEAVKLSPSAFNSQSSRAVILFGAES-DKFWGFVMQALRQIVPADAF------AA 81
Cdd:pfam00881   1 IRQRRSVRKFDPE-PVPKEVLEEIL-EAARRAPSAGNLQPWRFYVVTDGELrYRLAEAALELLLVEPAAALLlllrrdAN 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516238931   82 TEGKINSFAAGAGTVLFyedrhVVAGLQDKYPAYADNFPIWSEQASGIAQFSVWTALANAGIGASLQHYnpLPDALAAAE 161
Cdd:pfam00881  79 LKLLLQDFLRGAPVLIV-----ITASLSTYLRKAAERAYREALLDAGAAAQNLLLAATSLGLGSCPIGG--FDAAAVREL 151
                         170
                  ....*....|....*.
gi 516238931  162 WQLPETWHLRAQMPFG 177
Cdd:pfam00881 152 LGLPDDERLVGLIAVG 167
 
Name Accession Description Interval E-value
FMR2 COG3560
Fatty acid repression mutant protein (predicted oxidoreductase) [General function prediction ...
4-199 3.67e-133

Fatty acid repression mutant protein (predicted oxidoreductase) [General function prediction only];


Pssm-ID: 442781  Cd Length: 196  Bit Score: 371.06  E-value: 3.67e-133
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516238931   4 AFIDTIKRRRSQYALGKNLPLAQDQVTALIQEAVKLSPSAFNSQSSRAVILFGAESDKFWGFVMQALRQIVPADAFAATE 83
Cdd:COG3560    1 DFLEAIKNRRSIYALGKNLPISDEEIEEIIKEAVKHTPSAFNSQSSRVVVLFGEEHDKLWDITKETLRKIVPAEAFAPTE 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516238931  84 GKINSFAAGAGTVLFYEDRHVVAGLQDKYPAYADNFPIWSEQASGIAQFSVWTALANAGIGASLQHYNPLPDALAAAEWQ 163
Cdd:COG3560   81 EKINSFAAGYGTVLFFEDQDVVKGLQEQFPLYADNFPVWSEQSSGMAQYAVWTALAEEGIGASLQHYNPLIDEAVAKEWN 160
                        170       180       190
                 ....*....|....*....|....*....|....*.
gi 516238931 164 LPETWHLRAQMPFGSNEGDFPEKGFMDDAERFRVFG 199
Cdd:COG3560  161 IPASWKLRAQMPFGSIEAPAGEKEFIPDEERFKVFK 196
Frm2-like cd02140
nitroreductase family protein; A subfamily of the nitroreductase family containing ...
5-196 9.96e-104

nitroreductase family protein; A subfamily of the nitroreductase family containing uncharacterized proteins that are similar to nitroreductase. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and nitroimidazoles. This process requires NAD(P)H as electron donor in an obligatory two-electron transfer and uses FMN as cofactor. The enzyme is typically a homodimer. Members of this family are also called NADH dehydrogenase, oxygen-insensitive NAD(P)H nitrogenase or dihydropteridine reductase.


Pssm-ID: 380317  Cd Length: 192  Bit Score: 296.52  E-value: 9.96e-104
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516238931   5 FIDTIKRRRSQYALGKNLPLAQDQVTALIQEAVKLSPSAFNSQSSRAVILFGAESDKFWGFVMQALRQIVPADAFAATEG 84
Cdd:cd02140    1 FLEAAKARRTIYALGKNSPVSDEEIEEIVKEAVKHVPSSFNSQSSRAVILLGDEHKKLWDIVKDTLRPLVPAEAFEATKE 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516238931  85 KINSFAAGAGTVLFYEDRHVVAGLQDKYPAYADNFPIWSEQASGIAQFSVWTALANAGIGASLQHYNPLPDALAAAEWQL 164
Cdd:cd02140   81 KLNGFKAGYGTVLFFEDQDVVKGLQEQFPAYADNFPVWSEQSSGMAQIAVWTALALEGIGANLQHYNPLIDAAVAKKWNI 160
                        170       180       190
                 ....*....|....*....|....*....|..
gi 516238931 165 PETWHLRAQMPFGSNEGDFPEKGFMDDAERFR 196
Cdd:cd02140  161 PSNWKLRAQLVFGSPEAPPGEKTFIPDEDRVK 192
Nitroreductase pfam00881
Nitroreductase family; The nitroreductase family comprises a group of FMN- or FAD-dependent ...
9-177 5.23e-16

Nitroreductase family; The nitroreductase family comprises a group of FMN- or FAD-dependent and NAD(P)H-dependent enzymes able to metabolize nitrosubstituted compounds.


Pssm-ID: 425926 [Multi-domain]  Cd Length: 168  Bit Score: 72.04  E-value: 5.23e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516238931    9 IKRRRSQYALGKNlPLAQDQVTALIqEAVKLSPSAFNSQSSRAVILFGAES-DKFWGFVMQALRQIVPADAF------AA 81
Cdd:pfam00881   1 IRQRRSVRKFDPE-PVPKEVLEEIL-EAARRAPSAGNLQPWRFYVVTDGELrYRLAEAALELLLVEPAAALLlllrrdAN 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516238931   82 TEGKINSFAAGAGTVLFyedrhVVAGLQDKYPAYADNFPIWSEQASGIAQFSVWTALANAGIGASLQHYnpLPDALAAAE 161
Cdd:pfam00881  79 LKLLLQDFLRGAPVLIV-----ITASLSTYLRKAAERAYREALLDAGAAAQNLLLAATSLGLGSCPIGG--FDAAAVREL 151
                         170
                  ....*....|....*.
gi 516238931  162 WQLPETWHLRAQMPFG 177
Cdd:pfam00881 152 LGLPDDERLVGLIAVG 167
Nitro_FMN_reductase cd02062
nitroreductase family protein; Proteins of this family catalyze the reduction of flavin or ...
9-177 4.81e-09

nitroreductase family protein; Proteins of this family catalyze the reduction of flavin or nitrocompounds using NAD(P)H as electron donor in a obligatory two-electron transfer, utilizing FMN or FAD as cofactor. They are often found to be homodimers. Enzymes of this family are described as NAD(P)H:FMN oxidoreductases, oxygen-insensitive nitroreductase, flavin reductase P, dihydropteridine reductase, NADH oxidase or NADH dehydrogenase.


Pssm-ID: 380311 [Multi-domain]  Cd Length: 139  Bit Score: 52.68  E-value: 4.81e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516238931   9 IKRRRS--QYalgKNLPLAQDQVTALIqEAVKLSPSAFNSQSSRAVILFGAESDKfwgfvmqalrqivpadAFAATEGKI 86
Cdd:cd02062    1 IKTRRSirKF---TDKPVPEEKLRKIL-EAARLAPSAGNLQPWRFIVVRDREKKE----------------KLAKLAAPN 60
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516238931  87 NSFAAGAGTVLfyedrhVVAGLQDKYPAyadnfpiWSEQASGIAQFSVWTALANAGIGASLQHYNPLPDALAAAEWQLPE 166
Cdd:cd02062   61 QKFIAGAPVVI------VVVADPDKSRP-------WALEDAGAAAQNLLLAAAALGLGSCWIGGFDFREDKVRELLGIPE 127
                        170
                 ....*....|.
gi 516238931 167 TWHLRAQMPFG 177
Cdd:cd02062  128 NLRPVALIAIG 138
NfnB COG0778
Nitroreductase [Energy production and conversion]; Nitroreductase is part of the Pathway ...
5-177 1.03e-07

Nitroreductase [Energy production and conversion]; Nitroreductase is part of the Pathway/BioSystem: Pyrimidine degradation


Pssm-ID: 440541 [Multi-domain]  Cd Length: 163  Bit Score: 49.47  E-value: 1.03e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516238931   5 FIDTIKRRRSQYALgKNLPLAQDQVTALIqEAVKLSPSAFNSQSSRAVILFGAEsdkfwgfvmqALRQIVPADAFAATEg 84
Cdd:COG0778    1 LLELLLTRRSVRKF-TDKPVSDEELEELL-EAARLAPSAGNLQPWRFVVVRDPE----------LRERLAEALAEANQE- 67
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516238931  85 kinsFAAGAGTVLFyedrhVVAglqDKYPAYADNFPIWSEQASGIAQfSVWTALANAGIGASLQhyNPLPDALAAAEWQL 164
Cdd:COG0778   68 ----WVADAPVLIV-----VCA---DPDRSEKVPERYALLDAGIAAQ-NLLLAARALGLGTCWI--GGFDPEKVRELLGL 132
                        170
                 ....*....|...
gi 516238931 165 PETWHLRAQMPFG 177
Cdd:COG0778  133 PEGEEPVALLALG 145
TdsD-like cd02138
nitroreductase similar to Burkholderia pseudomallei TdsD; A subfamily of the nitroreductase ...
9-70 2.50e-03

nitroreductase similar to Burkholderia pseudomallei TdsD; A subfamily of the nitroreductase family containing uncharacterized proteins that are similar to Burkholderia pseudomallei TdsD, may be involved in the processing of organosulfur compounds. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and nitroimidazoles. This process requires NAD(P)H as electron donor in an obligatory two-electron transfer and uses FMN as cofactor. The enzyme is typically a homodimer.


Pssm-ID: 380315 [Multi-domain]  Cd Length: 174  Bit Score: 37.14  E-value: 2.50e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 516238931   9 IKRRRSQYALgKNLPLAQDQVTALIqEAVKLSPSAFNSQSSRavILFGAESDKFWGFVMQAL 70
Cdd:cd02138    2 IAERWSPRAF-SPEPISEEDLLSLF-EAARWAPSCFNEQPWR--FVVARRDTEAFEKLLDLL 59
nitroreductase cd02139
nitroreductase family protein; A subfamily of the nitroreductase family containing ...
5-53 3.98e-03

nitroreductase family protein; A subfamily of the nitroreductase family containing uncharacterized proteins. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and nitroimidazoles. This process requires NAD(P)H as electron donor in an obligatory two-electron transfer and uses FMN as cofactor. The enzyme is typically a homodimer.


Pssm-ID: 380316 [Multi-domain]  Cd Length: 165  Bit Score: 36.29  E-value: 3.98e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|.
gi 516238931   5 FIDTIKRRRS--QYalgKNLPLAQDQVtALIQEAVKLSPSAFNSQSSRAVI 53
Cdd:cd02139    1 VYEAIKKRRSirKY---KPTPVEEEKL-LRILEAARLAPSAKNRQPWRFIV 47
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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