|
Name |
Accession |
Description |
Interval |
E-value |
| AnsP |
COG1113 |
L-asparagine transporter or related permease [Amino acid transport and metabolism]; |
2-446 |
0e+00 |
|
L-asparagine transporter or related permease [Amino acid transport and metabolism];
Pssm-ID: 440730 [Multi-domain] Cd Length: 458 Bit Score: 598.26 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 2 AENLQRELSNRHVQLIAIGGAIGTGLFLGAGQTIAMTGPSILLTYIFIGFMLFMFMRGLGEIIIQNTNFKSFADVTNKYI 81
Cdd:COG1113 10 EEGLKRGLKNRHIQMIALGGAIGTGLFLGSGKAIALAGPAVLLSYLIAGLIVFLVMRALGEMAVANPVSGSFSDYAREYL 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 82 GPFAGFVTGWTYWLCWIITGMAEVTAVAKYVSFWFPAVPNWISALFCVLVLMSFNLLSAKLFGELEFWFSIIKIVTILGL 161
Cdd:COG1113 90 GPWAGFVTGWLYWFFWVLVGMAEATAVGIYLQFWFPDVPQWVWALVFLVLLTAINLLSVKLFGEFEFWFALIKVVAIVAF 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 162 IVVGAVMILFAYKTQFGH-ASLTNLYSH-GIFPKGASGFFMSFQMAVFSFVGIEMIGVTAGETKDPESTIPKAINSVPIR 239
Cdd:COG1113 170 IVVGLLLIFFGFGLPGGPpAGLSNLWDHgGFFPNGIGGVLAALQIVVFAFGGIELVGIAAAEAKDPEKTIPKAINSVIWR 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 240 ILVFYVGALAVIMSIIPWDKVDPDNSPFVKLFTLIGIPFAAGLINFVVLTAAASSCNSGIFSNSRMLFGLSDKKQAPPAF 319
Cdd:COG1113 250 ILLFYVGSLFVILALVPWNQIGAGGSPFVTVFSLLGIPAAAGIMNFVVLTAALSSLNSGLYSTSRMLYSLAERGDAPKFF 329
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 320 SKTNKNGVPHVAIIGSSALLLIAALLNYIFPDAtlVFTYVTTLSTVLFLIVWALIIVAYINYSRKNPKLH-KESIYKLPG 398
Cdd:COG1113 330 GKLSKRGVPVRAILLSAVVLLIGVVLNYLLPEK--AFTFLLSISGFGALFVWLMILVSQLKFRRRLPREGaAALKFKMPG 407
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 516234253 399 GKYMGYVILIFFILVFGLLFVNETTRRAIYLTPLWFILLGFMYWRYKK 446
Cdd:COG1113 408 FPYTSYLTLAFLAAVLVLMAFDPDTRIALIVGPVWLALLVVGYFLVRR 455
|
|
| PRK11049 |
PRK11049 |
D-alanine/D-serine/glycine permease; Provisional |
3-451 |
0e+00 |
|
D-alanine/D-serine/glycine permease; Provisional
Pssm-ID: 236830 Cd Length: 469 Bit Score: 559.74 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 3 ENLQRELSNRHVQLIAIGGAIGTGLFLGAGQTIAMTGPSILLTYIFIGFMLFMFMRGLGEIIIQNTNFKSFADVTNKYIG 82
Cdd:PRK11049 16 QSLRRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGPSIIFVYMIIGFMLFFVMRAMGELLLSNLEYKSFSDFASDLLG 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 83 PFAGFVTGWTYWLCWIITGMAEVTAVAKYVSFWFPAVPNWISALFCVLVLMSFNLLSAKLFGELEFWFSIIKIVTILGLI 162
Cdd:PRK11049 96 PWAGYFTGWTYWFCWVVTGIADVVAITAYAQFWFPDLSDWVASLAVVLLLLSLNLATVKMFGEMEFWFAMIKIVAIVALI 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 163 VVGAVMILFAYKTQFGH-ASLTNLYSH-GIFPKGASGFFMSFQMAVFSFVGIEMIGVTAGETKDPESTIPKAINSVPIRI 240
Cdd:PRK11049 176 VVGLVMVAMHFQSPTGVeASFAHLWNDgGMFPKGLSGFFAGFQIAVFAFVGIELVGTTAAETKDPEKSLPRAINSIPIRI 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 241 LVFYVGALAVIMSIIPWDKVDPDNSPFVKLFTLIGIPFAAGLINFVVLTAAASSCNSGIFSNSRMLFGLSDKKQAPPAFS 320
Cdd:PRK11049 256 IMFYVFALIVIMSVTPWSSVVPDKSPFVELFVLVGLPAAASVINFVVLTSAASSANSGVFSTSRMLFGLAQEGVAPKAFA 335
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 321 KTNKNGVPHVAIIGSSALLLIAALLNYIFPDATLVFTYVTTLSTVLFLIVWALIIVAYINYSRKNPKLHKESIYKLPGGK 400
Cdd:PRK11049 336 KLSKRAVPAKGLTFSCICLLGGVVLLYVNPSVIGAFTLVTTVSAILFMFVWTIILCSYLVYRKQRPHLHEKSIYKMPLGK 415
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 516234253 401 YMGYVILIFFILVFGLLFVNETTRRAIYLTPLWFILLGFMYWRYKKESQKL 451
Cdd:PRK11049 416 LMCWVCMAFFAFVLVLLTLEDDTRQALIVTPLWFIALGLGYLFIGKKRAAE 466
|
|
| AA_permease |
pfam00324 |
Amino acid permease; |
13-446 |
7.21e-88 |
|
Amino acid permease;
Pssm-ID: 366028 [Multi-domain] Cd Length: 467 Bit Score: 275.74 E-value: 7.21e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 13 HVQLIAIGGAIGTGLFLGAGQTIAMTGP-SILLTYIFIGFMLFMFMRGLGEIIIQNTNFKSFADVTNKYIGPFAGFVTGW 91
Cdd:pfam00324 1 HVQMIALGGVIGTGLFVGSGSVLGQAGPaGALLGYLISGVVIFLVMLSLGEISTNGPVSGGFYTYASRFLGPSLGFATGW 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 92 TYWLCWIITGMAEVTAVAKYVSFW--FPAVPN-WISALFCVLVLMSFNLLSAKLFGELEFWFSIIKIVTILGLIVVGAVM 168
Cdd:pfam00324 81 NYWLSWITVLALELTAASILIQFWelVPDIPYlWVWGAVFLVLLTIINLVGVKWYGEAEFWFALIKIIAIIGFIIVGIIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 169 ILFAYKTQF-GHASLTNLYSHGIFPKG-ASGFFMSFQMAVFSFVGIEMIGVTAGETKDPESTIPKAINSVPIRILVFYVG 246
Cdd:pfam00324 161 LSGGNPNDGaIFRYLGDNGGKNNFPPGfGKGFISVFVIAFFAFTGIELVGIAAGEVKNPEKSIPKAILQVIWRITIFYIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 247 ALAVIMSIIPWDKVDPDN------SPFVKLFTLIGIPFAAGLINFVVLTAAASSCNSGIFSNSRMLFGLSDKKQAPPAFS 320
Cdd:pfam00324 241 SLLAIGLLVPWNDPGLLNdsasaaSPFVIFFKFLGISGLAPLINAVILTAALSAANSSLYSGSRMLYSLARDGLAPKFLK 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 321 KTNKNGVPHVAIIGSSALLLIAALLNYIFPDatLVFTYVTTLSTVLFLIVWALIIVAYINYSR---KNPKLHKESIYKLP 397
Cdd:pfam00324 321 KVDKRGVPLRAILVSMVISLLALLLASLNPA--IVFNFLLAISGLSGLIVWGLISLSHLRFRKafkYQGRSIDELPFKAP 398
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 516234253 398 GGKYMGYVILIFFILVFGLLF-------------VNETTRRAIYLTPLWFILLGFMYWRYKK 446
Cdd:pfam00324 399 LGPLGVILGLAAIIIILIIQFlyaflpvpggpknWGAGSFAAAYLIVLLFLIILIGVKLHVK 460
|
|
| GABAperm |
TIGR01773 |
gamma-aminobutyrate permease; GABA permease (gabP) catalyzes the translocation of ... |
2-432 |
8.77e-87 |
|
gamma-aminobutyrate permease; GABA permease (gabP) catalyzes the translocation of 4-aminobutyrate (GABA) across the plasma membrane, with homologues expressed in Gram-negative and Gram-positive organisms. This permease is a highly hydrophobic transmembrane protein consisting of 12 transmembrane domains with hydrophilic N- and C-terminal ends. Induced by nitrogen-limited culture conditions in both Escherichia coli and Bacillus subtilis, gabP is an energy dependent transport system stimulated by membrane potential and has been observed adjacent and distant from other GABA degradation proteins. GabP is highly homologous to amino acid permeases from B. subtilis, E. coli, as well as to other members of the amino acid permease family (pfam00324). A member of the APC (amine-polyamine-choline) transporter superfamily, GABA permease possesses a "consensus amphiphatic region" (CAR) found to be evolutionarily conserved within this transport family. This amphiphatic region is located between helix 8 and cytoplasmic loop 8-9, forming a potential channel domain and suggested to play a significant role in ligand recognition and translocation. Unique to GABA permeases, a conserved cysteine residue (CYS-300, E.coli) located at the beginning of the amphiphatic domain, has been determined to be critical for catalytic specificity. [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273797 Cd Length: 452 Bit Score: 272.51 E-value: 8.77e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 2 AENLQRELSNRHVQLIAIGGAIGTGLFLGAGQTIAMTGPSILLTYIFIGFMLFMFMRGLGEIIIQNTNFKSFADVTNKYI 81
Cdd:TIGR01773 7 GLKLPNGLKTRHVTMLSIAGVIGAGLFVGSGSAIASAGPAALLAYLLAGLLVVFIMRMLGEMAVANPDTGSFSTYADDAI 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 82 GPFAGFVTGWTYWLCWIITGMAEVTAVAKYVSFWFPAVPNWISALFCVLVLMSFNLLSAKLFGELEFWFSIIKIVTILGL 161
Cdd:TIGR01773 87 GRWAGFTIGWLYWWFWVLVIPLEAIAAAGILQYWFPDIPLWLFSLILTIVLTLTNLYSVKSYGEFEFWFALIKVIAIIAF 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 162 IVVGAVMIlFAYKTQFGHASLTNLYSH-GIFPKGASGFFMSFQMAVFSFVGIEMIGVTAGETKDPESTIPKAINSVPIRI 240
Cdd:TIGR01773 167 IILGAVAI-FGFAPGSEVSGFSNLTGKgGFFPNGIGAVLLAILVTMFSFMGTEIVTIAAAESSNPIKSITRATNSVIWRI 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 241 LVFYVGALAVIMSIIPWDKVDPDNS-PFVKLFTLIGIPFAAGLINFVVLTAAASSCNSGIFSNSRMLFGLSDKKQAPPAF 319
Cdd:TIGR01773 246 IVFYLGSIFIVVALLPWNSPNLLEVgSYVAVLELLGIPHAKLIMDFVVLTAVLSCLNSALYTTSRMLYSLAERGDAPRVF 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 320 SKTNKNGVPHVAIIGSSALLLIAALLNYIFPDAtlVFTYVTTLSTVLFLIVWALIIVAYINYSRK---NPKLHKESIYKL 396
Cdd:TIGR01773 326 MKLNKKGVPVQAVLASTFFSFLTVVVNYFAPDK--VFLFLVNSSGAIALLVYLVIAVSQLRMRKKlkaNGEAIKIRMWLY 403
|
410 420 430
....*....|....*....|....*....|....*.
gi 516234253 397 PggkYMGYVILIFFILVFGLLFVNETTRRAIYLTPL 432
Cdd:TIGR01773 404 P---WLTWLVIIFICGILVSMLFIPSMRDEVLLTGL 436
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| AnsP |
COG1113 |
L-asparagine transporter or related permease [Amino acid transport and metabolism]; |
2-446 |
0e+00 |
|
L-asparagine transporter or related permease [Amino acid transport and metabolism];
Pssm-ID: 440730 [Multi-domain] Cd Length: 458 Bit Score: 598.26 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 2 AENLQRELSNRHVQLIAIGGAIGTGLFLGAGQTIAMTGPSILLTYIFIGFMLFMFMRGLGEIIIQNTNFKSFADVTNKYI 81
Cdd:COG1113 10 EEGLKRGLKNRHIQMIALGGAIGTGLFLGSGKAIALAGPAVLLSYLIAGLIVFLVMRALGEMAVANPVSGSFSDYAREYL 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 82 GPFAGFVTGWTYWLCWIITGMAEVTAVAKYVSFWFPAVPNWISALFCVLVLMSFNLLSAKLFGELEFWFSIIKIVTILGL 161
Cdd:COG1113 90 GPWAGFVTGWLYWFFWVLVGMAEATAVGIYLQFWFPDVPQWVWALVFLVLLTAINLLSVKLFGEFEFWFALIKVVAIVAF 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 162 IVVGAVMILFAYKTQFGH-ASLTNLYSH-GIFPKGASGFFMSFQMAVFSFVGIEMIGVTAGETKDPESTIPKAINSVPIR 239
Cdd:COG1113 170 IVVGLLLIFFGFGLPGGPpAGLSNLWDHgGFFPNGIGGVLAALQIVVFAFGGIELVGIAAAEAKDPEKTIPKAINSVIWR 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 240 ILVFYVGALAVIMSIIPWDKVDPDNSPFVKLFTLIGIPFAAGLINFVVLTAAASSCNSGIFSNSRMLFGLSDKKQAPPAF 319
Cdd:COG1113 250 ILLFYVGSLFVILALVPWNQIGAGGSPFVTVFSLLGIPAAAGIMNFVVLTAALSSLNSGLYSTSRMLYSLAERGDAPKFF 329
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 320 SKTNKNGVPHVAIIGSSALLLIAALLNYIFPDAtlVFTYVTTLSTVLFLIVWALIIVAYINYSRKNPKLH-KESIYKLPG 398
Cdd:COG1113 330 GKLSKRGVPVRAILLSAVVLLIGVVLNYLLPEK--AFTFLLSISGFGALFVWLMILVSQLKFRRRLPREGaAALKFKMPG 407
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 516234253 399 GKYMGYVILIFFILVFGLLFVNETTRRAIYLTPLWFILLGFMYWRYKK 446
Cdd:COG1113 408 FPYTSYLTLAFLAAVLVLMAFDPDTRIALIVGPVWLALLVVGYFLVRR 455
|
|
| PRK11049 |
PRK11049 |
D-alanine/D-serine/glycine permease; Provisional |
3-451 |
0e+00 |
|
D-alanine/D-serine/glycine permease; Provisional
Pssm-ID: 236830 Cd Length: 469 Bit Score: 559.74 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 3 ENLQRELSNRHVQLIAIGGAIGTGLFLGAGQTIAMTGPSILLTYIFIGFMLFMFMRGLGEIIIQNTNFKSFADVTNKYIG 82
Cdd:PRK11049 16 QSLRRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGPSIIFVYMIIGFMLFFVMRAMGELLLSNLEYKSFSDFASDLLG 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 83 PFAGFVTGWTYWLCWIITGMAEVTAVAKYVSFWFPAVPNWISALFCVLVLMSFNLLSAKLFGELEFWFSIIKIVTILGLI 162
Cdd:PRK11049 96 PWAGYFTGWTYWFCWVVTGIADVVAITAYAQFWFPDLSDWVASLAVVLLLLSLNLATVKMFGEMEFWFAMIKIVAIVALI 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 163 VVGAVMILFAYKTQFGH-ASLTNLYSH-GIFPKGASGFFMSFQMAVFSFVGIEMIGVTAGETKDPESTIPKAINSVPIRI 240
Cdd:PRK11049 176 VVGLVMVAMHFQSPTGVeASFAHLWNDgGMFPKGLSGFFAGFQIAVFAFVGIELVGTTAAETKDPEKSLPRAINSIPIRI 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 241 LVFYVGALAVIMSIIPWDKVDPDNSPFVKLFTLIGIPFAAGLINFVVLTAAASSCNSGIFSNSRMLFGLSDKKQAPPAFS 320
Cdd:PRK11049 256 IMFYVFALIVIMSVTPWSSVVPDKSPFVELFVLVGLPAAASVINFVVLTSAASSANSGVFSTSRMLFGLAQEGVAPKAFA 335
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 321 KTNKNGVPHVAIIGSSALLLIAALLNYIFPDATLVFTYVTTLSTVLFLIVWALIIVAYINYSRKNPKLHKESIYKLPGGK 400
Cdd:PRK11049 336 KLSKRAVPAKGLTFSCICLLGGVVLLYVNPSVIGAFTLVTTVSAILFMFVWTIILCSYLVYRKQRPHLHEKSIYKMPLGK 415
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 516234253 401 YMGYVILIFFILVFGLLFVNETTRRAIYLTPLWFILLGFMYWRYKKESQKL 451
Cdd:PRK11049 416 LMCWVCMAFFAFVLVLLTLEDDTRQALIVTPLWFIALGLGYLFIGKKRAAE 466
|
|
| LysP |
COG0833 |
Amino acid permease [Amino acid transport and metabolism]; |
3-453 |
8.43e-127 |
|
Amino acid permease [Amino acid transport and metabolism];
Pssm-ID: 440595 [Multi-domain] Cd Length: 467 Bit Score: 375.66 E-value: 8.43e-127
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 3 ENLQRELSNRHVQLIAIGGAIGTGLFLGAGQTIAMTGP-SILLTYIFIGFMLFMFMRGLGEIIIQNTNFKSFADVTNKYI 81
Cdd:COG0833 8 NKLKRGLKSRHLSMIALGGVIGTGLFLASGYTISQAGPgGALLAYLLGGLMVYFLMTSLGELAVAMPVSGSFQTYATRFI 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 82 GPFAGFVTGWTYWLCWIITGMAEVTAVAKYVSFWFPAVPNWISALFCVLVLMSFNLLSAKLFGELEFWFSIIKIVTILGL 161
Cdd:COG0833 88 DPAFGFAVGWNYWLNWAITVAAELTAAGIIMQYWFPDVPVWIWSLLFLALIFLLNALSVKAFGESEFWFSLIKVITVIAF 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 162 IVVGAVMIL-FAYKTQFGHASLTnlYSHGIFPKGASGFFMSFQMAVFSFVGIEMIGVTAGETKDPESTIPKAINSVPIRI 240
Cdd:COG0833 168 IIVGLLMIFgIIGGHAPGFSNFT--TGDGPFPGGFLAILGVMMIVGFSFQGTELIGIAAGESENPEKTIPKAIRQVFWRI 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 241 LVFYVGALAVIMSIIPWDKVDPDNSPFVKLFTLIGIPFAAGLINFVVLTAAASSCNSGIFSNSRMLFGLSDKKQAPPAFS 320
Cdd:COG0833 246 LLFYILAIFVIAALIPYTDAGVAESPFTLVFERAGIPYAADIMNAVILTAVLSAGNSGLYASTRMLWSLAKEGMAPKIFA 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 321 KTNKNGVPHVAIIGSSALLLIAALLNYIFPDAtlVFTYVTTLSTVLFLIVWALIIVAYINYSR---KNPKLHKESIYKLP 397
Cdd:COG0833 326 KLNKRGVPLNALLATMAVGLLALLSSFFGAGT--VYLWLLSISGLTGFIAWLGIAISHYRFRRayvAQGGDLEDLKYKAP 403
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 516234253 398 GGKYMGYVILIFFILVFGLLFVNETTRRAIYLT-PLWFILLGFMYWRYKKESQKLND 453
Cdd:COG0833 404 LFPFGPIFAFILCLIVIIGQAFDPEQRIALYIGiPFFLACYLGYKLKKKTKLVPLEE 460
|
|
| PRK10238 |
PRK10238 |
aromatic amino acid transporter AroP; |
2-450 |
2.79e-118 |
|
aromatic amino acid transporter AroP;
Pssm-ID: 182324 [Multi-domain] Cd Length: 456 Bit Score: 353.49 E-value: 2.79e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 2 AENLQRELSNRHVQLIAIGGAIGTGLFLGAGQTIAMTGPSILLTYIFIGFMLFMFMRGLGEIIIQNTNFKSFADVTNKYI 81
Cdd:PRK10238 7 GEQLKRGLKNRHIQLIALGGAIGTGLFLGSASVIQSAGPGIILGYAIAGFIAFLIMRQLGEMVVEEPVAGSFSHFAYKYW 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 82 GPFAGFVTGWTYWLCWIITGMAEVTAVAKYVSFWFPAVPNWISALFCVLVLMSFNLLSAKLFGELEFWFSIIKIVTILGL 161
Cdd:PRK10238 87 GSFAGFASGWNYWVLYVLVAMAELTAVGKYIQFWYPEIPTWVSAAVFFVVINAINLTNVKVFGEMEFWFAIIKVIAVVAM 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 162 IVVGAvMILFAyKTQFGHASLTNLYSHGIF-PKGASGFFMSFQMAVFSFVGIEMIGVTAGETKDPESTIPKAINSVPIRI 240
Cdd:PRK10238 167 IIFGG-WLLFS-GNGGPQATVSNLWDQGGFlPHGFTGLVMMMAIIMFSFGGLELVGITAAEADNPEQSIPKATNQVIYRI 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 241 LVFYVGALAVIMSIIPWDKVDPDNSPFVKLFTLIGIPFAAGLINFVVLTAAASSCNSGIFSNSRMLFGLSDKKQAPPAFS 320
Cdd:PRK10238 245 LIFYIGSLAVLLSLMPWTRVTADTSPFVLIFHELGDTFVANALNIVVLTAALSVYNSCVYCNSRMLFGLAQQGNAPKALA 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 321 KTNKNGVPHVAIIGSSALLLIAALLNYIFPDATlvFTYVTTLSTVLFLIVWALIIVAYINYSRKnpKLHKESIYKLPGGK 400
Cdd:PRK10238 325 SVDKRGVPVNTILVSALVTALCVLINYLAPESA--FGLLMALVVSALVINWAMISLAHMKFRRA--KQEQGVVTRFPALL 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 516234253 401 YM--GYVILIFFILVFGLLFVNETTRRAIYLTPLWFILLGFMYWrYKKESQK 450
Cdd:PRK10238 401 YPlgNWICLLFMAAVLVIMLMTPGMAISVYLIPVWLIVLGIGYL-FKEKTAK 451
|
|
| proY |
PRK10580 |
putative proline-specific permease; Provisional |
5-452 |
4.96e-113 |
|
putative proline-specific permease; Provisional
Pssm-ID: 182566 [Multi-domain] Cd Length: 457 Bit Score: 340.26 E-value: 4.96e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 5 LQRELSNRHVQLIAIGGAIGTGLFLGAGQTIAMTGPSILLTYIFIGFMLFMFMRGLGEIIIQNTNFKSFADVTNKYIGPF 84
Cdd:PRK10580 7 LKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSVLLAYIIGGVAAYIIMRALGEMSVHNPAASSFSRYAQENLGPL 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 85 AGFVTGWTYWLCWIITGMAEVTAVAKYVSFWFPAVPNWISALFCVLVLMSFNLLSAKLFGELEFWFSIIKIVTILGLIVV 164
Cdd:PRK10580 87 AGYITGWTYCFEILIVAIADVTAFGIYMGVWFPTVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATIIIMIVA 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 165 GAVMILFAYKTQFGHASLTNLYSHG-IFPKGASGFFMSFQMAVFSFVGIEMIGVTAGETKDPESTIPKAINSVPIRILVF 243
Cdd:PRK10580 167 GIGIIIWGIGNGGQPTGIHNLWSNGgFFSNGWLGMVMSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAINSVPMRILVF 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 244 YVGALAVIMSIIPWDKVDPDNSPFVKLFTLIGIPFAAGLINFVVLTAAASSCNSGIFSNSRMLFGLSDKKQAPPAFSKTN 323
Cdd:PRK10580 247 YVGTLFVIMSIYPWNQVGTNGSPFVLTFQHMGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPKIFSKTS 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 324 KNGVPHVAIIGSSALLLIAALLNYIFPDAtlVFTYVTTLSTVLFLIVWALIIVAYINYSRKNPKLHKESI-YKLPGGKYM 402
Cdd:PRK10580 327 RRGIPWVTVLVMTTALLFAVYLNYIMPEN--VFLVIASLATFATVWVWIMILLSQIAFRRRLPPEEVKALkFKVPGGVAT 404
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 516234253 403 GYVILIFFILVFGLLFVNETTRRAIYLTPLWFILLgFMYWRYKKESQKLN 452
Cdd:PRK10580 405 TIGGLIFLVFIIGLIGYHPDTRISLYVGFAWIVLL-LIGWMFKRRHDRQL 453
|
|
| PRK10249 |
PRK10249 |
phenylalanine transporter; Provisional |
5-437 |
4.67e-108 |
|
phenylalanine transporter; Provisional
Pssm-ID: 236667 Cd Length: 458 Bit Score: 327.33 E-value: 4.67e-108
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 5 LQRELSNRHVQLIAIGGAIGTGLFLGAGQTIAMTGPSILLTYIFIGFMLFMFMRGLGEIIIQNTNFKSFADVTNKYIGPF 84
Cdd:PRK10249 19 LHRGLHNRHIQLIALGGAIGTGLFLGIGPAIQMAGPAVLLGYGVAGIIAFLIMRQLGEMVVEEPVSGSFAHFAYKYWGPF 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 85 AGFVTGWTYWLCWIITGMAEVTAVAKYVSFWFPAVPNWISALFCVLVLMSFNLLSAKLFGELEFWFSIIKIVTILGLIVV 164
Cdd:PRK10249 99 AGFLSGWNYWVMFVLVGMAELTAAGIYMQYWFPDVPTWIWAAAFFIIINAVNLVNVRLYGETEFWFALIKVLAIIGMIGF 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 165 GAVMILFAYKTQfgHASLTNLYSH-GIFPKGASGFFMSFQMAVFSFVGIEMIGVTAGETKDPESTIPKAINSVPIRILVF 243
Cdd:PRK10249 179 GLWLLFSGHGGE--KASIDNLWRYgGFFATGWNGLILSLAVIMFSFGGLELIGITAAEARDPEKSIPKAVNQVVYRILLF 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 244 YVGALAVIMSIIPWDKVDPDNSPFVKLFTLIGIPFAAGLINFVVLTAAASSCNSGIFSNSRMLFGLSDKKQAPPAFSKTN 323
Cdd:PRK10249 257 YIGSLVVLLALYPWVEVKSNSSPFVMIFHNLDSNVVASALNFVILVASLSVYNSGVYSNSRMLFGLSVQGNAPKFLTRVS 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 324 KNGVPHVAIIGSSALLLIAALLNYIFPDATlvFTYVTTLSTVLFLIVWALIIVAYINYSRKNPKLHKESIYKLPGGKYMG 403
Cdd:PRK10249 337 RRGVPINSLMLSGAITSLVVLINYLLPQKA--FGLLMALVVATLLLNWIMICLAHLRFRAAMRRQGRETQFKALLYPFGN 414
|
410 420 430
....*....|....*....|....*....|....
gi 516234253 404 YVILIFFILVFGLLFVNETTRRAIYLTPLWFILL 437
Cdd:PRK10249 415 YLCIAFLGMILLLMCTMDDMRLSAILLPVWIVFL 448
|
|
| PRK10746 |
PRK10746 |
putative transport protein YifK; Provisional |
1-442 |
6.14e-108 |
|
putative transport protein YifK; Provisional
Pssm-ID: 182694 Cd Length: 461 Bit Score: 327.16 E-value: 6.14e-108
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 1 MAEN---LQRELSNRHVQLIAIGGAIGTGLFLGAGQTIAMTGPSILLTYIFIGFMLFMFMRGLGEIIIQNTNFKSFADVT 77
Cdd:PRK10746 1 MADNkpeLQRGLEARHIELIALGGTIGVGLFMGAASTLKWAGPSVLLAYIIAGLFVFFIMRSMGEMLFLEPVTGSFAVYA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 78 NKYIGPFAGFVTGWTYWLCWIITGMAEVTAVAKYVSFWFPAVPNWISALFCVLVLMSFNLLSAKLFGELEFWFSIIKIVT 157
Cdd:PRK10746 81 HRYMSPFFGYLTAWSYWFMWMAVGISEITAIGVYVQFWFPEMAQWIPALIAVALVALANLAAVRLYGEIEFWFAMIKVTT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 158 ILGLIVVGAVMILFAYKTQFGHASLTNLYSHG-IFPKGASGFFMSFQMAVFSFVGIEMIGVTAGETKDPESTIPKAINSV 236
Cdd:PRK10746 161 IIVMIVIGLGVIFFGFGNGGQSIGFSNLTEHGgFFAGGWKGFLTALCIVVASYQGVELIGITAGEAKNPQVTLRSAVGKV 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 237 PIRILVFYVGALAVIMSIIPWDKVDPDNSPFVKLFTLIGIPFAAGLINFVVLTAAASSCNSGIFSNSRMLFGLSDKKQAP 316
Cdd:PRK10746 241 LWRILIFYVGAIFVIVTIFPWNEIGSNGSPFVLTFAKIGITAAAGIINFVVLTAALSGCNSGMYSCGRMLYALAKNRQLP 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 317 PAFSKTNKNGVPHVAIIGSSALLLIAALLNYIFPDATLVFTYVTTLSTVLFLIVWALIIVAYINYSRKNPKLHKESIYKL 396
Cdd:PRK10746 321 AAMAKVSRHGVPVAGVAVSILILLVGSCLNYIIPNPQRVFVYVYSASVLPGMVPWFVILISQLRFRRAHKAAIASHPFRS 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 516234253 397 PGGKYMGYVILIFFILVFGLLFVNETTRRAIYLTPLWFILLGFMYW 442
Cdd:PRK10746 401 ILFPWANYLTMAFLICVLIGMYFNEDTRMSLFVGIIFLLAVTLIYK 446
|
|
| AA_permease |
pfam00324 |
Amino acid permease; |
13-446 |
7.21e-88 |
|
Amino acid permease;
Pssm-ID: 366028 [Multi-domain] Cd Length: 467 Bit Score: 275.74 E-value: 7.21e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 13 HVQLIAIGGAIGTGLFLGAGQTIAMTGP-SILLTYIFIGFMLFMFMRGLGEIIIQNTNFKSFADVTNKYIGPFAGFVTGW 91
Cdd:pfam00324 1 HVQMIALGGVIGTGLFVGSGSVLGQAGPaGALLGYLISGVVIFLVMLSLGEISTNGPVSGGFYTYASRFLGPSLGFATGW 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 92 TYWLCWIITGMAEVTAVAKYVSFW--FPAVPN-WISALFCVLVLMSFNLLSAKLFGELEFWFSIIKIVTILGLIVVGAVM 168
Cdd:pfam00324 81 NYWLSWITVLALELTAASILIQFWelVPDIPYlWVWGAVFLVLLTIINLVGVKWYGEAEFWFALIKIIAIIGFIIVGIIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 169 ILFAYKTQF-GHASLTNLYSHGIFPKG-ASGFFMSFQMAVFSFVGIEMIGVTAGETKDPESTIPKAINSVPIRILVFYVG 246
Cdd:pfam00324 161 LSGGNPNDGaIFRYLGDNGGKNNFPPGfGKGFISVFVIAFFAFTGIELVGIAAGEVKNPEKSIPKAILQVIWRITIFYIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 247 ALAVIMSIIPWDKVDPDN------SPFVKLFTLIGIPFAAGLINFVVLTAAASSCNSGIFSNSRMLFGLSDKKQAPPAFS 320
Cdd:pfam00324 241 SLLAIGLLVPWNDPGLLNdsasaaSPFVIFFKFLGISGLAPLINAVILTAALSAANSSLYSGSRMLYSLARDGLAPKFLK 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 321 KTNKNGVPHVAIIGSSALLLIAALLNYIFPDatLVFTYVTTLSTVLFLIVWALIIVAYINYSR---KNPKLHKESIYKLP 397
Cdd:pfam00324 321 KVDKRGVPLRAILVSMVISLLALLLASLNPA--IVFNFLLAISGLSGLIVWGLISLSHLRFRKafkYQGRSIDELPFKAP 398
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 516234253 398 GGKYMGYVILIFFILVFGLLF-------------VNETTRRAIYLTPLWFILLGFMYWRYKK 446
Cdd:pfam00324 399 LGPLGVILGLAAIIIILIIQFlyaflpvpggpknWGAGSFAAAYLIVLLFLIILIGVKLHVK 460
|
|
| GABAperm |
TIGR01773 |
gamma-aminobutyrate permease; GABA permease (gabP) catalyzes the translocation of ... |
2-432 |
8.77e-87 |
|
gamma-aminobutyrate permease; GABA permease (gabP) catalyzes the translocation of 4-aminobutyrate (GABA) across the plasma membrane, with homologues expressed in Gram-negative and Gram-positive organisms. This permease is a highly hydrophobic transmembrane protein consisting of 12 transmembrane domains with hydrophilic N- and C-terminal ends. Induced by nitrogen-limited culture conditions in both Escherichia coli and Bacillus subtilis, gabP is an energy dependent transport system stimulated by membrane potential and has been observed adjacent and distant from other GABA degradation proteins. GabP is highly homologous to amino acid permeases from B. subtilis, E. coli, as well as to other members of the amino acid permease family (pfam00324). A member of the APC (amine-polyamine-choline) transporter superfamily, GABA permease possesses a "consensus amphiphatic region" (CAR) found to be evolutionarily conserved within this transport family. This amphiphatic region is located between helix 8 and cytoplasmic loop 8-9, forming a potential channel domain and suggested to play a significant role in ligand recognition and translocation. Unique to GABA permeases, a conserved cysteine residue (CYS-300, E.coli) located at the beginning of the amphiphatic domain, has been determined to be critical for catalytic specificity. [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273797 Cd Length: 452 Bit Score: 272.51 E-value: 8.77e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 2 AENLQRELSNRHVQLIAIGGAIGTGLFLGAGQTIAMTGPSILLTYIFIGFMLFMFMRGLGEIIIQNTNFKSFADVTNKYI 81
Cdd:TIGR01773 7 GLKLPNGLKTRHVTMLSIAGVIGAGLFVGSGSAIASAGPAALLAYLLAGLLVVFIMRMLGEMAVANPDTGSFSTYADDAI 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 82 GPFAGFVTGWTYWLCWIITGMAEVTAVAKYVSFWFPAVPNWISALFCVLVLMSFNLLSAKLFGELEFWFSIIKIVTILGL 161
Cdd:TIGR01773 87 GRWAGFTIGWLYWWFWVLVIPLEAIAAAGILQYWFPDIPLWLFSLILTIVLTLTNLYSVKSYGEFEFWFALIKVIAIIAF 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 162 IVVGAVMIlFAYKTQFGHASLTNLYSH-GIFPKGASGFFMSFQMAVFSFVGIEMIGVTAGETKDPESTIPKAINSVPIRI 240
Cdd:TIGR01773 167 IILGAVAI-FGFAPGSEVSGFSNLTGKgGFFPNGIGAVLLAILVTMFSFMGTEIVTIAAAESSNPIKSITRATNSVIWRI 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 241 LVFYVGALAVIMSIIPWDKVDPDNS-PFVKLFTLIGIPFAAGLINFVVLTAAASSCNSGIFSNSRMLFGLSDKKQAPPAF 319
Cdd:TIGR01773 246 IVFYLGSIFIVVALLPWNSPNLLEVgSYVAVLELLGIPHAKLIMDFVVLTAVLSCLNSALYTTSRMLYSLAERGDAPRVF 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 320 SKTNKNGVPHVAIIGSSALLLIAALLNYIFPDAtlVFTYVTTLSTVLFLIVWALIIVAYINYSRK---NPKLHKESIYKL 396
Cdd:TIGR01773 326 MKLNKKGVPVQAVLASTFFSFLTVVVNYFAPDK--VFLFLVNSSGAIALLVYLVIAVSQLRMRKKlkaNGEAIKIRMWLY 403
|
410 420 430
....*....|....*....|....*....|....*.
gi 516234253 397 PggkYMGYVILIFFILVFGLLFVNETTRRAIYLTPL 432
Cdd:TIGR01773 404 P---WLTWLVIIFICGILVSMLFIPSMRDEVLLTGL 436
|
|
| PRK15049 |
PRK15049 |
L-asparagine permease; |
3-417 |
8.41e-81 |
|
L-asparagine permease;
Pssm-ID: 185009 Cd Length: 499 Bit Score: 258.40 E-value: 8.41e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 3 ENLQRELSNRHVQLIAIGGAIGTGLFLGAGQTIAMTGPSILLTYIFIGFMLFMFMRGLGEIIIQNTNFKSFADVTNKYIG 82
Cdd:PRK15049 24 EGYHKAMGNRQVQMIAIGGAIGTGLFLGAGARLQMAGPALALVYLICGLFSFFILRALGELVLHRPSSGSFVSYAREFLG 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 83 PFAGFVTGWTYWLCWIITGMAEVTAVAKYVSFW--FPAVPNWISALFCVLVLMSFNLLSAKLFGELEFWFSIIKIVTILG 160
Cdd:PRK15049 104 EKAAYVAGWMYFINWAMTGIVDITAVALYMHYWgaFGGVPQWVFALAALTIVGTMNMIGVKWFAEMEFWFALIKVLAIVT 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 161 LIVVGAVMiLFAYKTQFGHASLTNLYSH--GIFPKGASGFFMSFQMAVFSFVGIEMIGVTAGETKDPESTIPKAINSVPI 238
Cdd:PRK15049 184 FLVVGTVF-LGSGQPLDGNTTGFHLITDngGFFPHGLLPALVLIQGVVFAFASIEMVGTAAGECKDPQTMVPKAINSVIW 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 239 RILVFYVGALAVIMSIIPWDKVDPDNSPFVKLFTLIGIPFAAGLINFVVLTAAASSCNSGIFSNSRMLFGLSDKKQAPPA 318
Cdd:PRK15049 263 RIGLFYVGSVVLLVMLLPWSAYQAGQSPFVTFFSKLGVPYIGSIMNIVVLTAALSSLNSGLYCTGRILRSMAMGGSAPSF 342
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 319 FSKTNKNGVPHVAIIGSSALLLIAALLNYIFPdaTLVFTYVTTLSTVLFLIVWALIIVAYINYsRKNPKLHKES--IYKL 396
Cdd:PRK15049 343 MAKMSRQHVPYAGILATLVVYVVGVFLNYLVP--SRVFEIVLNFASLGIIASWAFIIVCQMRL-RKAIKEGKAAdvSFKL 419
|
410 420
....*....|....*....|.
gi 516234253 397 PGGKYMGYVILIFFILVFGLL 417
Cdd:PRK15049 420 PGAPFTSWLTLLFLLSVLVLM 440
|
|
| PRK11387 |
PRK11387 |
S-methylmethionine permease; |
2-384 |
4.35e-76 |
|
S-methylmethionine permease;
Pssm-ID: 236904 Cd Length: 471 Bit Score: 245.53 E-value: 4.35e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 2 AENLQRELSNRHVQLIAIGGAIGTGLFLGAGQTIAMTGPS-ILLTYIFIGFMLFMFMRGLGEIIIQNTNFKSFADVTNKY 80
Cdd:PRK11387 9 AGQFKRTMKVRHLVMLSLGGVIGTGLFFNTGYIISTTGAAgTLLAYLIGALVVYLVMQCLGELSVAMPETGAFHVYAARY 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 81 IGPFAGFVTGWTYWLCWIITGMAEVTAVAKYVSFWFPAVPNWI-SALFCVLVLMsFNLLSAKLFGELEFWFSIIKIVTIL 159
Cdd:PRK11387 89 LGPATGYTVAWLYWLTWTVALGSSLTAAGFCMQYWFPQVPVWPwCLLFCALIFG-LNVVSTRFFAEGEFWFSLIKVVTIL 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 160 GLIVVGAVMILFAYKTQFGHAS--LTNLYSHGIFPKGASGFFMSFQMAVFSFVGIEMIGVTAGETKDPESTIPKAINSVP 237
Cdd:PRK11387 168 AFIVLGGAAIFGFIPMQDGSPApgLRNLTAEGWFPHGGLPILMTMVAVNFAFSGTELIGIAAGETENPAKVIPVAIRTTI 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 238 IRILVFYVGALAVIMSIIPWDKVDPDNSPFVKLFTLIGIPFAAGLINFVVLTAAASSCNSGIFSNSRMLFGLSDKKQAPP 317
Cdd:PRK11387 248 ARLVIFFVGTVLVLAALIPMQQAGVEKSPFVLVFEKVGIPYAADIFNFVILTAILSAANSGLYASGRMLWSLSNEGTLPA 327
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 516234253 318 AFSKTNKNGVPHVAIIGSSALLLIAALLNYIFPDAtlVFTYVTTLSTVLFLIVWALIIVAYINYSRK 384
Cdd:PRK11387 328 CFARLTKRGIPLTALSVSMLGGLLALFSSVVAPDT--VFVALSAISGFAVVAVWLSICASHFMFRRR 392
|
|
| 2A0310 |
TIGR00913 |
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines] |
6-414 |
3.21e-75 |
|
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273334 Cd Length: 478 Bit Score: 243.34 E-value: 3.21e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 6 QRELSNRHVQLIAIGGAIGTGLFLGAGQTIAMTGP-SILLTYIFIGFMLFMFMRGLGEIIIQ-NTNFKSFADVTNKYIGP 83
Cdd:TIGR00913 1 KKSLKQRHIQMIALGGTIGTGLLVGSGTALATGGPaGLLIGYAIMGSIIYCVMQSLGEMATFyPVVSGSFATYASRFVDP 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 84 FAGFVTGWTYWLCWIITGMAEVTAVAKYVSFWFPAVPN--WISALFCVLVLMsfNLLSAKLFGELEFWFSIIKIVTILGL 161
Cdd:TIGR00913 81 AFGFAVGWNYWLQWLIVLPLELVTASMTIQYWTDKVNPavWIAIFYVFIVII--NLFGVKGYGEAEFWFSSIKILAIIGF 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 162 IVVGAVMIL----------FAYKTQFGhaSLTNLYSHGIFPkgasGFFMSFQMAVFSFVGIEMIGVTAGETKDPESTIPK 231
Cdd:TIGR00913 159 IILSIILNCgggpnhgyigFRYWHDPG--AFAGGTIGGRFK----GVCSVFVTAAFSFGGTELVALTAGEAANPRKSIPR 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 232 AINSVPIRILVFYVGALAVIMSIIPWD---------KVDPDNSPFVKLFTLIGIPFAAGLINFVVLTAAASSCNSGIFSN 302
Cdd:TIGR00913 233 AAKRTFWRILVFYILTLFLIGFLVPYNdprllssssSSDSAASPFVIAIQNHGIKVLPHIFNAVILISVLSAANSSLYAS 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 303 SRMLFGLSDKKQAPPAFSKTNKNGVPHVAIIGSSALLLIAALLnyIFPDATLVFTYVTTLSTVLFLIVWALIIVAYINYS 382
Cdd:TIGR00913 313 SRTLYALAHQGLAPKIFAYVDRRGVPYVAVIVSSLFGLLAFLA--VSKKEAEVFTWLLNISGLSGFFTWMCICLSHIRFR 390
|
410 420 430
....*....|....*....|....*....|....*
gi 516234253 383 ---RKNPKLHKESIYKLPGGKYMGYVILIFFILVF 414
Cdd:TIGR00913 391 kamKAQGRSLDELPYKSQTGPYGSYYALFFNILIL 425
|
|
| PRK10836 |
PRK10836 |
lysine transporter; Provisional |
5-332 |
3.54e-72 |
|
lysine transporter; Provisional
Pssm-ID: 182767 Cd Length: 489 Bit Score: 235.87 E-value: 3.54e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 5 LQRELSNRHVQLIAIGGAIGTGLFLGAGQTIAMTGPS-ILLTYIFIGFMLFMFMRGLGEIIIQNTNFKSFADVTNKYIGP 83
Cdd:PRK10836 13 LRRELKARHLTMIAIGGSIGTGLFVASGATISQAGPGgALLSYMLIGLMVYFLMTSLGELAAYMPVSGSFATYGQNYVEE 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 84 FAGFVTGWTYWLCWIITGMAEVTAVAKYVSFWFPAVPNWI-SALFCVLVLMsFNLLSAKLFGELEFWFSIIKIVTILGLI 162
Cdd:PRK10836 93 GFGFALGWNYWYNWAVTIAVDLVAAQLVMSWWFPDTPGWIwSALFLGVIFL-LNYISVRGFGEAEYWFSLIKVTTVIVFI 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 163 VVGAVMILFAYKTQFGHASLTNLYSHGIFPKGASGFFMSFQMAVFSFVGIEMIGVTAGETKDPESTIPKAINSVPIRILV 242
Cdd:PRK10836 172 IVGVLMIIGIFKGAEPAGWSNWTIGDAPFAGGFAAMIGVAMIVGFSFQGTELIGIAAGESEDPAKNIPRAVRQVFWRILL 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 243 FYVGALAVIMSIIPW--------DKVDPDNSPFVKLFTLIGIPFAAGLINFVVLTAAASSCNSGIFSNSRMLFGLSDKKQ 314
Cdd:PRK10836 252 FYVFAILIISLIIPYtdpsllrnDVKDISVSPFTLVFQHAGLLSAAAVMNAVILTAVLSAGNSGMYASTRMLYTLACDGK 331
|
330
....*....|....*...
gi 516234253 315 APPAFSKTNKNGVPHVAI 332
Cdd:PRK10836 332 APRIFAKLSRGGVPRNAL 349
|
|
| PRK10197 |
PRK10197 |
GABA permease; |
16-377 |
2.05e-58 |
|
GABA permease;
Pssm-ID: 182297 Cd Length: 446 Bit Score: 198.31 E-value: 2.05e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 16 LIAIGGAIGTGLFLGAGQTIAMTGPSILLTYIFIGFMLFMFMRGLGEIIIQNTNFKSFADVTNKYIGPFAGFVTGWTYWL 95
Cdd:PRK10197 1 MLSIAGVIGASLFVGSSVAIAEAGPAVLLAYLFAGLLVVMIMRMLAEMAVATPDTGSFSTYADKAIGRWAGYTIGWLYWW 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 96 CWIITGMAEVTAVAKYVSFWFPAVPNWISALFCVLVLMSFNLLSAKLFGELEFWFSIIKIVTILGLIVVGAVMI--LFAY 173
Cdd:PRK10197 81 FWVLVIPLEANIAAMILHSWVPGIPIWLFSLVITLALTGSNLLSVKNYGEFEFWLALCKVIAILAFIFLGAVAIsgFYPY 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 174 KTQFGhasLTNLYSHGIF-PKGASGFFMSFQMAVFSFVGIEMIGVTAGETKDPESTIPKAINSVPIRILVFYVGALAVIM 252
Cdd:PRK10197 161 AEVSG---ISRLWDSGGFmPNGFGAVLSAMLITMFSFMGAEIVTIAAAESDTPEKHIVRATNSVIWRISIFYLCSIFVVV 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 253 SIIPWDKVD-PDNSPFVKLFTLIGIPFAAGLINFVVLTAAASSCNSGIFSNSRMLFGLSDKKQAPPAFSKTNKNGVPHVA 331
Cdd:PRK10197 238 ALIPWNMPGlKAVGSYRSVLELLNIPHAKLIMDCVILLSVTSCLNSALYTASRMLYSLSRRGDAPAVMGKINRSKTPYVA 317
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 516234253 332 IIGSSALLLIAALLNYIFPdaTLVFTYVTTLSTVLFLIVWALIIVA 377
Cdd:PRK10197 318 VLLSTGAAFLTVVVNYYAP--AKVFKFLIDSSGAIALLVYLVIAVS 361
|
|
| PotE |
COG0531 |
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism]; |
5-447 |
1.29e-53 |
|
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
Pssm-ID: 440297 [Multi-domain] Cd Length: 438 Bit Score: 185.49 E-value: 1.29e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 5 LQRELSNRHVQLIAIGGAIGTGLFLGAGQTIAMTGPSILLTYIFIGFMLFMFMRGLGEIIIQNTNFKSFADVTNKYIGPF 84
Cdd:COG0531 9 LKRKLGLFDLVALGVGAIIGAGIFVLPGLAAGLAGPAAILAWLIAGLLALLVALSYAELASAFPRAGGAYTYARRALGPL 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 85 AGFVTGWTYWLCWIITGMAEVTAVAKYVSFWFPAVPNWISALFCVLVLMSFNLLSAKLFGELEFWFSIIKIVTILGLIVV 164
Cdd:COG0531 89 LGFLAGWALLLSYVLAVAAVAVAFGGYLSSLFPAGGSVLIALVLILLLTLLNLRGVKESAKVNNILTVLKLLVLLLFIVV 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 165 GAVMilfayktqFGHASLTNLYSHGifpKGASGFFMSFQMAVFSFVGIEMIGVTAGETKDPESTIPKAINSVPIRILVFY 244
Cdd:COG0531 169 GLFA--------FDPANFTPFLPAG---GGLSGVLAALALAFFAFTGFEAIANLAEEAKNPKRNIPRAIILSLLIVGVLY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 245 VGALAVIMSIIPWDKVDPDNSPFVKLFTLIGIPFAAGLINFVVLTAAASSCNSGIFSNSRMLFGLSDKKQAPPAFSKTN- 323
Cdd:COG0531 238 ILVSLALTGVVPYDELAASGAPLADAAEAVFGPWGAILIALGALLSLLGALNASILGASRLLYAMARDGLLPKVFAKVHp 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 324 KNGVPHVAIIGSSALLLIAALLNYifpdatLVFTYVTTLSTVLFLIVWALIIVAYINYSRKNPKLHKEsiYKLPggkymG 403
Cdd:COG0531 318 RFGTPVNAILLTGVIALLLLLLGA------ASFTALASLASVGVLLAYLLVALAVIVLRRRRPDLPRP--FRVP-----L 384
|
410 420 430 440
....*....|....*....|....*....|....*....|....
gi 516234253 404 YVILIFFILVFGLLFVNeTTRRAIYLTPLWFILLGFMYWRYKKE 447
Cdd:COG0531 385 PLIPILGILLCLFLLYL-LGPGALLIGLVLLAIGLLLYLLYRRR 427
|
|
| AA_permease_2 |
pfam13520 |
Amino acid permease; |
17-439 |
2.90e-26 |
|
Amino acid permease;
Pssm-ID: 404414 [Multi-domain] Cd Length: 427 Bit Score: 110.09 E-value: 2.90e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 17 IAIGGAIGTGLFLGAGqtIAMTGPSILLtYIFIGFMLFMFMRGLGEIIIQNTNFKSFAD--VTNKYIGPFAGFVTGWTYW 94
Cdd:pfam13520 9 LVIGSVIGSGIFVAPL--VASGGPALIV-WGWIAAIIFSLAVGLVYAELSSALPRSGGIyvYLENAFGKFVAFLAGWSNW 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 95 LCWIITGMAEVTAVAKY-VSFWFPAVPNWIS-----ALFCVLVLMSFNLLSAKLFGELEFWFSIIKIVTILGLIVvgavm 168
Cdd:pfam13520 86 FAYVLGLASSASVAASYlLSALGPDLVPTTWltygiAIAILIIFAIINIRGVRESAKIQNILGILKLLLPLILII----- 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 169 ILFAYKTQFGHASLTNLYSHGIFPKGASGFFMSFQMAVFSFVGIEMIGVTAGETKDPesTIPKAINSVPIRILVFYVGAL 248
Cdd:pfam13520 161 ILGLVTADGGGFNLLSGEWHTFFPDGWPGVFAGFLGVLWSFTGFESAANVSEEVKKR--NVPKAIFIGVIIVGVLYILVN 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 249 AVIMSIIPWD---KVDPDNSPFVKLFTLIGIPFAAGLINFVVLTAAASSCNSGIFSNSRMLFGLSDKKQAPPA--FSKTN 323
Cdd:pfam13520 239 IAFFGVVPDDeiaLSSGLGQVAALLFQAVGGKWGAIIVVILLALSLLGAVNTAIVGASRLLYALARDGVLPFSrfFAKVN 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 324 KNGVPHVAIIGSSALLLIAALlnyIFPDATLVFTYVTTLSTVLFLIVWALIIVAYINYSRKNPKLHkesiyKLPGGKYMG 403
Cdd:pfam13520 319 KFGSPIRAIILTAILSLILLL---LFLLSPAAYNALLSLSAYGYLLSYLLPIIGLLILRKKRPDLG-----RIPGRWPVA 390
|
410 420 430
....*....|....*....|....*....|....*.
gi 516234253 404 YVILIFFILVFGLLFVNETTRRAIYLTPLWFILLGF 439
Cdd:pfam13520 391 IFGILFSLFLIVALFFPPVGPATGSSLNYAIILIVA 426
|
|
| 2A0303 |
TIGR00906 |
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ... |
5-451 |
9.89e-19 |
|
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273330 [Multi-domain] Cd Length: 557 Bit Score: 88.72 E-value: 9.89e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 5 LQRELSNRHVQLIAIGGAIGTGLFLGAGQTI-AMTGPSILLTYIFIGFMLFMFMRGLGEIIIQNTNFKSFADVTNKYIGP 83
Cdd:TIGR00906 26 MKRCLTTWDLMALGIGSTIGAGIYVLTGEVArNDSGPAIVLSFLISGLAAVLSGFCYAEFGARVPKAGSAYLYSYVTVGE 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 84 FAGFVTGWTYWLCWIITGMAEVTA--------VAKYVSFWFPAV-----------PNWIsALFCVLVLMSFNLLSAKLFG 144
Cdd:TIGR00906 106 LWAFITGWNLILEYVIGTAAVARSwsayfdelLNKQIGQFRRTYfklnydglaeyPDFF-AVCLILLLAVLLSFGVKESA 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 145 ELEFWFSIIKIVTILGLIVVGAVmilfayKTQFGHASLT-NLYSHGIFPKGASGFFMSFQMAVFSFVGIEMIGVTAGETK 223
Cdd:TIGR00906 185 WVNKIFTAINILVLLFVIIAGFT------KADVANWSITeEKGAGGFMPYGFTGVLSGAATCFFAFIGFDAIATTGEEVK 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 224 DPESTIPKAINSVPIRILVFYVGALAVIMSIIPWDKVDPDnSPFVKLFTLIGIPFAAGLINFVVLTAAASSCNSGIFSNS 303
Cdd:TIGR00906 259 NPQRAIPIGIVTSLLVCFVAYFLMSAALTLMMPYYLLDPD-APFPVAFEYVGWDPAKYIVAVGALCGMSTSLLGGMFPLP 337
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 304 RMLFGLSDKKQAPPAFSKTN-KNGVPhvaIIGSSALLLIAALLNYIFPDATLV-FTYVTTLSTVLFLIVWALIIVAYINY 381
Cdd:TIGR00906 338 RVIYAMARDGLLFKWLAQINsKTKTP---INATVVSGAIAALMAFLFDLKALVdLLSIGTLLAYSLVAACVLILRYQPGL 414
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 382 SRKNPKLHKE-----------SIYKLPGGKYMGYVI---LIFFILVFGLLFVNETTRRA---IYLT--PLWFILLGFMYW 442
Cdd:TIGR00906 415 VYDQAKDTDEkdtldswvpftSKSESQSEGFSLRTLfsgLILGLSILTTYGRAAIAEEAwsiALLTlfLVLFLLVVLTIW 494
|
....*....
gi 516234253 443 RYKKESQKL 451
Cdd:TIGR00906 495 RQPQNKQKV 503
|
|
| PRK10644 |
PRK10644 |
arginine/agmatine antiporter; |
79-369 |
6.40e-14 |
|
arginine/agmatine antiporter;
Pssm-ID: 182613 [Multi-domain] Cd Length: 445 Bit Score: 73.29 E-value: 6.40e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 79 KYIGPFAGFVTGWTYWLCWIITGMAEVTAVAKYVSFWFPAVPN-WISALFCVLVLMSF---NLLSAKLFGELEFWFSIIK 154
Cdd:PRK10644 79 RCFGPFLGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPILKDpLVLTITCVVVLWIFvllNIVGPKMITRVQAVATVLA 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 155 IVTILGLIVVGavMILFAYKTQFGHASLTNLYSHGIFPKGASgffmsfqMAVFSFVGIEMIGVTAGETKDPESTIPKAIN 234
Cdd:PRK10644 159 LIPIVGIAVFG--WFWFRGETYMAAWNVSGLGTFGAIQSTLN-------VTLWSFIGVESASVAAGVVKNPKRNVPIATI 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 235 SVPIRILVFYVGALAVIMSIIPWDKVDPDNSPFVKLFTLIGIPFAAGLINFVVLTAAASSCNSGIFSNSRMLFGLSDKKQ 314
Cdd:PRK10644 230 GGVLIAAVCYVLSSTAIMGMIPNAALRVSASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGL 309
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 516234253 315 APPAFSKTNKNGVP--HVAIIGssaLLLIAALLNYIFPDATLVFTYVTTLSTVLFLI 369
Cdd:PRK10644 310 FPPIFARVNKAGTPvaGLLIVG---VLMTIFQLSSISPNASKEFGLVSSVSVIFTLV 363
|
|
| 2A0302 |
TIGR00905 |
transporter, basic amino acid/polyamine antiporter (APA) family; This family includes several ... |
81-379 |
1.78e-11 |
|
transporter, basic amino acid/polyamine antiporter (APA) family; This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions. [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 129983 Cd Length: 473 Bit Score: 65.85 E-value: 1.78e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 81 IGPFAGFVTGWTYWLCWIITGMAEVTAVAKYVSFWFPA------VPNWISALFCVLVLMSFNLLSAKLFGELEFWFSIIK 154
Cdd:TIGR00905 83 FGPYIGFMSGWGYWLSAWIGNVAYAVLLFSALGYFFPLfgsgnpVPSILGASVLLWVFTFLVLRGVRQAAFINTITTIAK 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 155 IVTILGLIVVGAVMILFA-YKTQFGHASLTNLYSHGIFPKGasgffmSFQMAVFSFVGIEMIGVTAGETKDpESTIPKAI 233
Cdd:TIGR00905 163 LIPLFLFIIIGWFWFKLDlFTADFWGHDVPSLGSVFSQVKN------TMLVTLWVFIGIEGAVVSSGRAKN-KSDVGKAT 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 234 NSVPIRILVFYVGALAVIMSIIPWDKVDPDNSPFVKLF--TLIGiPFAAGLINFVVLTAAASSCNSGIFSNSRMLFGLSD 311
Cdd:TIGR00905 236 VLGTLGALVIYILITLLSLGVLPQQELANLPNPSMAAVleMIVG-KWGAVLISLGLIISVLGSLLSWTMLAAEVPFSAAK 314
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 516234253 312 KKQAPPAFSKTNKNGVPHVAIIgssallliaaLLNYIFPDATLVFTYVTTLSTVLFLIVWALIIVAYI 379
Cdd:TIGR00905 315 DGLFPKIFGRVNKNGAPSVALL----------LTNILIQLFLLLTLLTSSAYNVLVSLAVVMILVPYL 372
|
|
| frlA |
PRK11357 |
amino acid permease; |
2-295 |
1.56e-10 |
|
amino acid permease;
Pssm-ID: 183096 [Multi-domain] Cd Length: 445 Bit Score: 62.95 E-value: 1.56e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 2 AENLQRELSNRHVQLIAIGGAIGTGLFLGAGQTIAMTGPSILLTYIFIgfmlfmfmrgLGEIIIQNTNFkSFADVTNKYI 81
Cdd:PRK11357 3 SQELQRKLGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGTPWLTVLAFV----------IGGLIVIPQMC-VYAELSTAYP 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 82 -------------GPFAGFVTGWTYWLCWIITGMAEVT-AVAKYVSFWFPAVPNWISALFCVLVL--MSFNLLSAKLFGE 145
Cdd:PRK11357 72 engadyvylknagSRPLAFLSGWASFWANDAPSLSIMAlAIVSNLGFLTPIDPLLGKFIAAGLIIafMLLHLRSVEGGAA 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 146 LEFWFSIIKIVTILGLIVVGavmILFAYKTQFGHASLTNLyshgifpkGASGFFMSFQMAV----FSFVGIEMIGVTAGE 221
Cdd:PRK11357 152 FQTLITIAKIIPFTIVIGLG---IFWFKAENFAAPTTTAI--------GATGSFMALLAGIsatsWSYTGMASICYMTGE 220
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 516234253 222 TKDPESTIPKAINSVPIRILVFYVGALAVIMSIIPWDKVDPDNSPFVKLFTLI-GIPFAAGLI----NFVVLTAAASSC 295
Cdd:PRK11357 221 IKNPGKTMPRALIGSCLLVLVLYTLLALVISGLMPFDKLANSETPISDALTWIpALGSTAGIFvaitAMIVILGSLSSC 299
|
|
| cadB |
PRK10435 |
cadaverine/lysine antiporter; |
81-336 |
3.65e-06 |
|
cadaverine/lysine antiporter;
Pssm-ID: 182458 Cd Length: 435 Bit Score: 48.98 E-value: 3.65e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 81 IGPFAGFVTGWTYWLC-WIITGMAEVTAVAkYVSFWFPA----VPNWISALFCVLVLMSFNLLSAKLFGELefwfSIIKI 155
Cdd:PRK10435 77 ISPAFGFQTGVLYYHAnWIGNLAIGITAVS-YLSTFFPVlndpIPAGIACIAIVWVFTFVNMLGGTWVSRL----TTIGL 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 156 VTILGLIVVGAVMILFAYKTQFGHASLTNLYSHGifpkgASGFFMSFQMAVFSFVGIEMIGVTAGETKDPESTIPKAINS 235
Cdd:PRK10435 152 VLVLIPVVGTAIVGWHWFDAATYAANWNTSDTTD-----GHAIIKSILLCLWAFVGVESAAVSTGMVKNPKRTVPLATML 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 236 VPIRILVFYVGALAVIMSIIPWDKVDPDNSPFVKLFTLIGIPFAAGLINFVVLTAAASSCNSGIfsnsrMLFGLSDKKQA 315
Cdd:PRK10435 227 GTGLAGIIYIAATQVISGMFPASVMAASGAPFAISASTILGNWAAPLVSAFTAFACLTSLGSWM-----MLVGQAGVRAA 301
|
250 260
....*....|....*....|....*.
gi 516234253 316 -----PPAFSKTNKNGVPHVAIIGSS 336
Cdd:PRK10435 302 ndgnfPKVYGEVDKNGIPKKGLLLAA 327
|
|
| 2A0308 |
TIGR00911 |
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ... |
5-316 |
7.62e-06 |
|
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273332 [Multi-domain] Cd Length: 501 Bit Score: 48.20 E-value: 7.62e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 5 LQRELSNRHVQLIAIGGAIGTGLFLGAGQTIAMTGPSIL------LTYIFIGFMLFMFMRgLGEIIIQNTNFKSFADVTn 78
Cdd:TIGR00911 40 LKKEITLLSGVGIIVGTIIGSGIFVSPKGVLKNAGSVGLalimwaVCGIFSIVGALVYAE-LGTTIPKSGGEYNYILEV- 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 79 kyIGPFAGFVTGWtYWLCWIITGMAEVTAVAKYVSFWFPA-----VPNW---ISALFCVLVLMSFNLLSAKLFGELEFWF 150
Cdd:TIGR00911 118 --FGPLLAFLRLW-IELLVIRPGSQAVNALNFAIYILTPVfpdceVPEWairLVAVLCVLLLTLVNCLSVKWATRVQDIF 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 151 SIIKIVTILGLIVVGAVMILfayKTQFGHASLTNLYSHgiFPKGASGFFMSFQMAVFSFVGIEMIGVTAGETKDPESTIP 230
Cdd:TIGR00911 195 TACKLLALLLIIITGWVQLG---KGGVESLNPKNAFEG--TETSAGGIVLAFYSGIWAYGGWNYLNFVTEEVKNPYRTLP 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516234253 231 KAI-NSVPIRILVFYVGALAVIMSIIPwDKVDPDNSPFVKLFTLIGIPFAAGLINFVVLTAAAsSCNSGIFSNSRMLFGL 309
Cdd:TIGR00911 270 IAIiISMPIVTFIYVLTNIAYFTVLSP-EELLASLAVAVDFGERLLGVMSWAMPALVGLSCFG-SVNGSLFSSSRLFFVG 347
|
....*..
gi 516234253 310 SDKKQAP 316
Cdd:TIGR00911 348 GREGHLP 354
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