|
Name |
Accession |
Description |
Interval |
E-value |
| FepA |
COG4771 |
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ... |
70-808 |
1.90e-71 |
|
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];
Pssm-ID: 443803 [Multi-domain] Cd Length: 612 Bit Score: 247.08 E-value: 1.90e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 70 IEVNSASAAIVFKLDPNNSLDEVVVTGNRSKvRSVLNSAVPIDKLYAEDLKSSGQVTFDKMLAYkIPSFNSSSqaiSDAT 149
Cdd:COG4771 8 LLLALAAQAADALAEDATELEEVVVTATRTE-QSLSDAPASVSVITAEEIEKLGATDLADALRL-LPGVSVTR---SGGR 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 150 AHFDPADLRGLGPSRTLVLVNGKRKNQSALVYindtpgkgevGTDMKSIPFSAIERVEVLRDGASAQYGSDAIAGVVNII 229
Cdd:COG4771 83 GGSSGISIRGLGGDRVLVLIDGVPVNNPALGG----------GGDLSYIPPDDIERIEVIRGPASALYGSDAIGGVINII 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 230 LKKQTNFTEVSLTSGVTSQGDGfNFGADLNSGFKIaDKGFVNFNISYLAQNKTnragkpgkddlfgvaaddaqwgdwlsR 309
Cdd:COG4771 153 TKKPTDELEGSVSLGYGSNGNG-TYSGSLSLGGPG-DKLSFLLSGSYRDRDGY--------------------------L 204
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 310 NPDLGMTIGLPDSKMGAFVVNAEYPLSEVTTVYAFGDVNIRKGTSYALYrapywvsdpnnllheAGTTYNGFQPTFETDI 389
Cdd:COG4771 205 DYRNGGFVGNSGYERYNLNAKLGYRLSDNHRLSLSGGYSRQDRDGGPPT---------------LGDTEISSDNAGDRDT 269
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 390 FDNLGSIGLRSN-VFGFNADFSLTAGSNKVDYTVGnSLNVSLGANSPTQfeaggytFSQLVGNADFSRTF-DKVTFGFGT 467
Cdd:COG4771 270 TTDRGNYSLRYNgDLGDNLDLSLYYSRTDRDSTNG-SLGGSTGSFSDSD-------DTTYGLELDLTYPLgGNHTLTLGA 341
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 468 EIRREQFEaragqEESYVGGGaqsfpglqpanalKETRSNVGVYTTLDYDMSEAFLIGGSIRYENYSDFG----DNISWK 543
Cdd:COG4771 342 EYRYDDLD-----SSSFLGGA-------------DASRDTYGLFAQDEWKLTDKLTLTAGLRYDYYSTFGasnyTAFSPR 403
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 544 VSSRYKLTNDVAIRASFSTGFRAPALHQIYLSNIQTlvsggrisnqgtfnnvdPAVIGLGVPKLDAEESQNIATGITFR- 622
Cdd:COG4771 404 LGLRYDLSDNLTLRASYGRGFRAPSLAELYGSGTGT-----------------PGRYVLGNPDLKPETSDNYELGLEYRl 466
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 623 SGANFSASLDFYHIKVRNRVLFSGEVGFDGDDTTtnpveevlldnditsmkfFINAVNTITKGVDVVLNYKNLEIGTGRL 702
Cdd:COG4771 467 GNGGLSLSLTGFYTDIKDLIVLVPVGPGPGDVLQ------------------YENVGKARTYGLELELKYRLGKGLTLTA 528
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 703 GLNLasniantkIDGKIgtpailsangydifNRKEQGRILSARPNTKVLLGMNYDLNKTTFIFNNTYFGEVTWQHATDVA 782
Cdd:COG4771 529 SYTY--------LDSKI--------------DDGDTGEPLPNVPPHKANLGLDYRLPKWWLLLLLTRYYGGRYVTPPSGR 586
|
730 740
....*....|....*....|....*.
gi 515558517 783 KDQTFAGKVITDLGVAYNFTSTLSAN 808
Cdd:COG4771 587 LEGYTPGYTLLDLRASYKLTKNLTLS 612
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
116-860 |
4.55e-52 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 193.05 E-value: 4.55e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 116 AEDLKSSGQVTFDKMLAYkIPSFNSSSQAISDAtahfDPADLRGLGPSRTLVLVNGKRKNQSALVYINDTPgkgevgtdm 195
Cdd:cd01347 7 AEDIEKQPATSLADLLRR-IPGVSVTRGGGGGG----STISIRGFGPDRTLVLVDGLPLASSNYGRGVDLN--------- 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 196 kSIPFSAIERVEVLRDGASAQYGSDAIAGVVNIILKKQTNFTEVSLTSGVTSQGDGFNFGA--DLNSGFKIADKGFVNFN 273
Cdd:cd01347 73 -TIPPELIERVEVLKGPSSALYGSGAIGGVVNIITKRPTDEFGGSVTAGYGSDNSGSSGGGgfDVSGALADDGAFGARLY 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 274 ISYLAQNktnragkpgkddlfGVAADDAQWGDWLSRNPDLgmtiglpdskMGAFvvnaEYPLSEVTTVYAFGDVNIRK-- 351
Cdd:cd01347 152 GAYRDGD--------------GTIDGDGQADDSDEERYNV----------AGKL----DWRPDDDTRLTLDAGYQDQDad 203
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 352 GTSYALYRAPYWVSDPNNLLHEAGTTYNGFQPTFETDIFDNLGSIGLRSNVFGFNADFSLTAGSNKVDYTVGNSLNVSLG 431
Cdd:cd01347 204 GPGGTLPANGTGSSLGGGPSSNTNGDRDWDYRDRYRKRASLGLEHDLNDTGWTLRANLSYSYTDNDGDPLILNGGNNAAG 283
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 432 ANSPTQFEAGGYTFSQLVGNADFSRTFD----KVTFGFGTEIRREQFEARagqeesyvgggaqsfpglqpanalketrsN 507
Cdd:cd01347 284 GDLGRSGYSSERDTTQLGFDAGLNAPFGtgpvAHTLTLGVEYRREELDEK-----------------------------Q 334
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 508 VGVYTTLDYDMSEAFLIGGSIRYENY--------------SDFGDNISWKVSSRYKLTNDVAIRASFSTGFRAPALHQIY 573
Cdd:cd01347 335 TALYAQDTIELTDDLTLTLGLRYDHYdqdskdtiaggttaKKSYSHWSPSLGLVYKLTDGLSLYASYSQGFRAPSLGELY 414
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 574 lsniqtlvsggrisnqgtFNNVDPAVIGLGVPKLDAEESQNIATGITFRSGANFSASLDFYHIKVRNRVLFSGEVgfdgd 653
Cdd:cd01347 415 ------------------GGGSHGGTAAVGNPNLKPEKSKQYELGLKYDPGDGLTLSAALFRIDIKNEIVSTPTN----- 471
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 654 dtttnpveevlldNDITSMKFFINAVNTITKGVDVVLNYkNLEIGTGrLGLNLASNIANTKIDgkigtpailsangydif 733
Cdd:cd01347 472 -------------TGLGLVTVYVNGGKARIRGVELEASY-DLTDGLG-LTGSYTYTDTEVKRT----------------- 519
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 734 NRKEQGRILSARPNTKVLLGMNYDLNKT--TFIFNNTYFGEvTWQHATDVAKDQTFAGKVITDLGVAYNFTSTLSANVMV 811
Cdd:cd01347 520 DGATTGNRLPGIPKHTANLGLDYELPDEglTAGGGVRYRGK-QYADTANGNNTVKVPGYTLVDLSASYQFTKNLTLRLGV 598
|
730 740 750 760
....*....|....*....|....*....|....*....|....*....
gi 515558517 812 NNLLNvypdlldtkGDVVTDLGGRFKYAWEVNQfgfSGTTFTAGLNFKF 860
Cdd:cd01347 599 NNLFD---------KDYYTSLSVRGSGLYGYYG---PGRTYYLSVSYKF 635
|
|
| OMP_RagA_SusC |
TIGR04056 |
TonB-linked outer membrane protein, SusC/RagA family; This model describes a distinctive clade ... |
11-695 |
5.82e-25 |
|
TonB-linked outer membrane protein, SusC/RagA family; This model describes a distinctive clade among the TonB-linked outer membrane proteins (OMP). Members of this family are restricted to the Bacteriodetes lineage (except for Gemmatimonas aurantiaca T-27 from the novel phylum Gemmatimonadetes) and occur in high copy numbers, with over 100 members from Bacteroides thetaiotaomicron VPI-5482 alone. Published descriptions of members of this family are available for RagA from Porphyromonas gingivalis, SusC from Bacteroides thetaiotaomicron, and OmpW from Bacteroides caccae. Members form pairs with members of the SusD/RagB family (pfam07980). Transporter complexes including these outer membrane proteins are likely to import large degradation products of proteins (e.g. RagA) or carbohydrates (e.g. SusC) as nutrients, rather than siderophores. [Transport and binding proteins, Unknown substrate]
Pssm-ID: 274948 [Multi-domain] Cd Length: 981 Bit Score: 111.91 E-value: 5.82e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 11 QTIKGIVTDENGQPLPYSNVIEKETSNGVTTDGNGNFEIKVkgfPV--TLIAKYVGFQNKSIEVNSASaAIVFKLDP-NN 87
Cdd:TIGR04056 1 ITVTGVVVDETGEPLIGASVVVKGTTNGTITDIDGNFSLKV---PPgaVLVFSYIGYKTQEVKVKGQK-NLNITLKEdTQ 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 88 SLDEVVVT--GNRSKvRSVLNSAVPIDklyAEDLKSSGQVTFDKMLAYKIPSFN---SSSQAISDATAHfdpadLRGlgp 162
Cdd:TIGR04056 77 ELDEVVVVgyGTQKK-KSLTGAVSTVK---AKELKKVPVSNLSNALQGKVAGVIitqSSGEPGGDAEIW-----IRG--- 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 163 SRTLvlvNGkrkNQSALVYINDTPGkgevGTDMKSIPFSAIERVEVLRDGAS-AQYGSDAIAGVVNIILKK-QTNFTEVS 240
Cdd:TIGR04056 145 ISSF---GG---NNSPLYVIDGVPR----DNGLSDLNPEDIESISVLKDASAtAIYGSRGANGVILITTKRgKEGKPKIS 214
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 241 LTSGVTSQG--------DGFNFGADLNSGFKIADKGFVN-FNISYLAQNKTNRAGKPG-----KDDLFGVAA-------- 298
Cdd:TIGR04056 215 YNAEFGFSTptrlpemlNAYEYAELYNEALLNRGSSPPDiYTDEEIEAYRNGLDPDLYpntdwQDEIFKRTAfnqrhnls 294
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 299 -----DDAQWGDWLSRNPDLGMTIGLpDSKMGAFVVNAEYPLSEVTTV-----YAFGDVNIRKGTSYALYRA-------- 360
Cdd:TIGR04056 295 vsggtEKARYYVSLGYYNEEGILKNS-DYKRYNFRANIDAKLTKTLKLslnvsGSLSKYNNPGGSTSNIWGAlmlfprgt 373
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 361 PYWV-------------SDPNNLLHEAGTTYNGFQPTFETDIFDNLGSI-----GLRsnvfgFNADFSLTAGSNK-VDYT 421
Cdd:TIGR04056 374 PYSTppvysdgyypaynSGNTSLQNPYALLNRGYNENERNRLNGNASLEqkitkGLK-----LKGTFSYDYSNYKnKKYY 448
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 422 VGNSLNVSLGANSPTQFEAGGYTFSQLVGNA--DFSRTFDKVTFG--FGTEIRREQFEARAGQEESYVGGGAQSfpGLQP 497
Cdd:TIGR04056 449 KNPYYYNATGGANNGYYSESNSRSRNYYLEAtlNYNRTFGKHNVSalLGYSQQENKSSSYGGLLDDLPSLDAGT--SDAS 526
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 498 ANALKETRSNVGVYTTLDYDMSEAFLIGGSIRYENYSDFGDN----------ISWKVsSRYKLTNDVA-------IRASF 560
Cdd:TIGR04056 527 VSGSDSEYRLQSLFGRATYSYKDRYLLEFNFRYDGSSRFAKGnrwgffpsvsLGWRI-SEEKFMKKLKkwlsflkLRASY 605
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 561 -STGFRAPALHQIYLSNIqTLVSGGRISNQGTFNNVDPAVIG-LGVPKLDAE--ESQNIATGITFRSGaNFSASLDFYHI 636
Cdd:TIGR04056 606 gIVGNDNIGDRYPYLSLY-NLGDGGYNFGTNNGTSVTGITESrYGNPNLKWEktKKWNLGLDLGFFNN-RLSLTVDYYYK 683
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 515558517 637 KVRNrVLFS----GEVGFdgddttTNPveevlldnditsmkfFINAVNTITKGVDVVLNYKNL 695
Cdd:TIGR04056 684 KTKD-ILQSrslpSVTGY------SSP---------------YANIGKVKNKGVELSLNYRNK 724
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
339-819 |
3.55e-22 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 101.00 E-value: 3.55e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 339 TTVYAFGDVNIRKGTSYALYRAPYWVSDPNNLLHEAGTTYNGFQPTFETDIFD---NLGSIGLR---SNVFGFNADFSLT 412
Cdd:pfam00593 5 SLDLLGDDTLLTLGYDYSRYTDGLDLGLTLDGYGNDGGYLGDRPLYYGRDYSDtdrKRLSLGYDydlGDGLSWLSTLRLG 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 413 AGSNKVDYTVGNSLNvSLGANSPTQFEAGGYTFSQLVGNADFSRTFD-KVTFGFGTEIRREQFEARAGQEESYVGGgaqs 491
Cdd:pfam00593 85 LRYSSLDGDYTSNSS-GLSGAGDYLSDDRLYGLYGLDGDLELSLDLShDLLLGVELRTAGLDYRRLDDDAYDPYDP---- 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 492 fPGLQPANALKETRSNVGVYTTLDYDMSEAFLIGGSIRYENYSDFGDN--------------ISWKVSSRYKLTNDVAIR 557
Cdd:pfam00593 160 -ANPSSSSYSDTTTDSYGLYLQDNIKLTDRLTLTLGLRYDHYSTDGDDgngggdnfsrsysaFSPRLGLVYKPTDNLSLY 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 558 ASFSTGFRAPALHQIYlsniqtlvsggrisnqGTFNNVDPAVIGLGVPKLDAEESQNIATGITFRSGaNFSASLDFYHIK 637
Cdd:pfam00593 239 ASYSRGFRAPSLGELY----------------GSGSGGGGGAVAGGNPDLKPETSDNYELGLKYDDG-RLSLSLALFYID 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 638 VRNRVLFSGEVGFDGDDTTTnpveevlldnditsmkfFINAVNTITKGVDVVLNYKNLEIGTGRLGLNLASNIANTKIDG 717
Cdd:pfam00593 302 IKNLITSDPDGPGLGGTVYT-----------------YTNVGKARIRGVELELSGRLWGLGLSGGGYTYTDADDDADADD 364
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 718 KigtpailsangydifnrkeqGRILSARPNTKVLLGMNYDLNKTTFIFNN----TYFGEVTWqhaTDVAKDQTFAGKVIT 793
Cdd:pfam00593 365 T--------------------GNPLPNVPRHTANLGLTYDFPLGGWGARLgaryVGSGERRY---GDAANTFKTPGYTLV 421
|
490 500
....*....|....*....|....*.
gi 515558517 794 DLGVAYNFTSTLSANVMVNNLLNVYP 819
Cdd:pfam00593 422 DLSAGYRLNKNLTLRLGVNNLFDKYY 447
|
|
| PRK13484 |
PRK13484 |
IreA family TonB-dependent siderophore receptor; |
157-860 |
3.74e-22 |
|
IreA family TonB-dependent siderophore receptor;
Pssm-ID: 139605 [Multi-domain] Cd Length: 682 Bit Score: 102.01 E-value: 3.74e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 157 LRGLGPSRTLVLVNGKRKNQsalvyiNDTPGKGEVGTDMKSIP-FSAIERVEVLRDGASAQYGSDAIAGVVNIILKKQTN 235
Cdd:PRK13484 90 IRGLSGDYTLILVDGRRQSG------RESRPNGSGGFEAGFIPpVEAIERIEVIRGPMSSLYGSDAIGGVINIITKPVNN 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 236 FT-EVSLTSGVTSQGDGfNFGADLN-----SGFKIADK-GFVNFNISYLAQNKTNRAGKPGKDdlfgvaaddaqwgdwls 308
Cdd:PRK13484 164 QTwDGVLGLGGIIQEHG-KFGNSTTndfylSGPLIKDKlGLQLYGGMNYRKEDSISQGTPAKD----------------- 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 309 rNPDLGMTIglpdskmgAFVvnaeyPLSEVTTVYAFGDVNIRK----GTSYALYRAPYWVSDPNNLLhEAGTTYNGFQPT 384
Cdd:PRK13484 226 -NKNITATL--------QFT-----PTESQKFVFEYGKNNQVHtltpGESLDAWTMRGNLKQPNSKR-ETHNSRSHWVAA 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 385 fetdiFDNLGSIgLRSNVFGFNADFSLTAGSNKVDYTVGNSLNvslgansptqFEAGGYTFSQLVGNADFSRTFDKVTFG 464
Cdd:PRK13484 291 -----WNAQGEI-LHPEIAVYQEKVIREVKSGKKDKYNHWDLN----------YESRKPEITNTIIDAKVTAFLPENVLT 354
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 465 FGTeirreQFEARAGQEESYVGGG---AQSFPGLQPAnalketrsnvgVYTTLDYDMSEAFLIGGSIRYENYSDFGDNIS 541
Cdd:PRK13484 355 IGG-----QFQHAELRDDSATGKKtteTQSVSIKQKA-----------VFIENEYAATDSLALTGGLRLDNHEIYGSYWN 418
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 542 WKVSSRYKLTNDVAIRASFSTGFRAPALHQIYlSNIQTLVSGGRisnqgtfnnvdpaVIGLGVPKLDAEESQNIATGITF 621
Cdd:PRK13484 419 PRLYAVYNLTDNLTLKGGIAKAFRAPSIREVS-PGFGTLTQGGA-------------SIMYGNRDLKPETSVTEEIGIIY 484
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 622 RSGANFSASLDFYHIKVRNRvLFSGEVGfdgddtTTNPveevlldndITSMKFFI--NAVNTITKGVDVVLN---YKNLE 696
Cdd:PRK13484 485 SNDSGFSASATLFNTDFKNK-LTSYDIG------TKDP---------VTGLNTFIydNVGEANIRGVELATQipvYDKWH 548
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 697 IGTGRLGLNLASNIANTKIDGKigtpailSANGYDIfnrkeqgrILSARPNTKVLLGMNYDlNKTTFIFNNTYFGEVTWQ 776
Cdd:PRK13484 549 VSANYTFTDSRRKSDDESLNGK-------SLKGEPL--------ERTPRHAANAKLEWDYT-QDITFYSSLNYTGKQIWA 612
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 777 HATDVAKDQTF-AGKVITDLGVAYNFTStlsaNVMVN-NLLNVypdlLDTKGDVVTDLGGRfkyaWEVNQfgfsGTTFTA 854
Cdd:PRK13484 613 AQRNGAKVPRVrNGFTSMDIGLNYQILP----DTLINfAVLNV----TDRKSEDIDTIDGN----WQVDE----GRRYWA 676
|
....*.
gi 515558517 855 GLNFKF 860
Cdd:PRK13484 677 NVRVSF 682
|
|
| CarbopepD_reg_2 |
pfam13715 |
CarboxypepD_reg-like domain; This domain family is found in bacteria, archaea and eukaryotes, ... |
13-94 |
1.86e-17 |
|
CarboxypepD_reg-like domain; This domain family is found in bacteria, archaea and eukaryotes, and is approximately 90 amino acids in length. The family is found in association with pfam07715 and pfam00593.
Pssm-ID: 433425 [Multi-domain] Cd Length: 88 Bit Score: 78.02 E-value: 1.86e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 13 IKGIVTDEN-GQPLPYSNVIEKETSNGVTTDGNGNFEIK-VKGFPVTLIAKYVGFQNKSIEVNSA---SAAIVFKLDP-N 86
Cdd:pfam13715 1 ISGTVVDENtGEPLPGATVYVKGTTKGTVTDADGNFELKnLPAGTYTLVVSFVGYKTQEKKVTVSndnTLDVNFLLKEdA 80
|
....*...
gi 515558517 87 NSLDEVVV 94
Cdd:pfam13715 81 LLLDEVVV 88
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| FepA |
COG4771 |
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ... |
70-808 |
1.90e-71 |
|
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];
Pssm-ID: 443803 [Multi-domain] Cd Length: 612 Bit Score: 247.08 E-value: 1.90e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 70 IEVNSASAAIVFKLDPNNSLDEVVVTGNRSKvRSVLNSAVPIDKLYAEDLKSSGQVTFDKMLAYkIPSFNSSSqaiSDAT 149
Cdd:COG4771 8 LLLALAAQAADALAEDATELEEVVVTATRTE-QSLSDAPASVSVITAEEIEKLGATDLADALRL-LPGVSVTR---SGGR 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 150 AHFDPADLRGLGPSRTLVLVNGKRKNQSALVYindtpgkgevGTDMKSIPFSAIERVEVLRDGASAQYGSDAIAGVVNII 229
Cdd:COG4771 83 GGSSGISIRGLGGDRVLVLIDGVPVNNPALGG----------GGDLSYIPPDDIERIEVIRGPASALYGSDAIGGVINII 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 230 LKKQTNFTEVSLTSGVTSQGDGfNFGADLNSGFKIaDKGFVNFNISYLAQNKTnragkpgkddlfgvaaddaqwgdwlsR 309
Cdd:COG4771 153 TKKPTDELEGSVSLGYGSNGNG-TYSGSLSLGGPG-DKLSFLLSGSYRDRDGY--------------------------L 204
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 310 NPDLGMTIGLPDSKMGAFVVNAEYPLSEVTTVYAFGDVNIRKGTSYALYrapywvsdpnnllheAGTTYNGFQPTFETDI 389
Cdd:COG4771 205 DYRNGGFVGNSGYERYNLNAKLGYRLSDNHRLSLSGGYSRQDRDGGPPT---------------LGDTEISSDNAGDRDT 269
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 390 FDNLGSIGLRSN-VFGFNADFSLTAGSNKVDYTVGnSLNVSLGANSPTQfeaggytFSQLVGNADFSRTF-DKVTFGFGT 467
Cdd:COG4771 270 TTDRGNYSLRYNgDLGDNLDLSLYYSRTDRDSTNG-SLGGSTGSFSDSD-------DTTYGLELDLTYPLgGNHTLTLGA 341
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 468 EIRREQFEaragqEESYVGGGaqsfpglqpanalKETRSNVGVYTTLDYDMSEAFLIGGSIRYENYSDFG----DNISWK 543
Cdd:COG4771 342 EYRYDDLD-----SSSFLGGA-------------DASRDTYGLFAQDEWKLTDKLTLTAGLRYDYYSTFGasnyTAFSPR 403
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 544 VSSRYKLTNDVAIRASFSTGFRAPALHQIYLSNIQTlvsggrisnqgtfnnvdPAVIGLGVPKLDAEESQNIATGITFR- 622
Cdd:COG4771 404 LGLRYDLSDNLTLRASYGRGFRAPSLAELYGSGTGT-----------------PGRYVLGNPDLKPETSDNYELGLEYRl 466
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 623 SGANFSASLDFYHIKVRNRVLFSGEVGFDGDDTTtnpveevlldnditsmkfFINAVNTITKGVDVVLNYKNLEIGTGRL 702
Cdd:COG4771 467 GNGGLSLSLTGFYTDIKDLIVLVPVGPGPGDVLQ------------------YENVGKARTYGLELELKYRLGKGLTLTA 528
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 703 GLNLasniantkIDGKIgtpailsangydifNRKEQGRILSARPNTKVLLGMNYDLNKTTFIFNNTYFGEVTWQHATDVA 782
Cdd:COG4771 529 SYTY--------LDSKI--------------DDGDTGEPLPNVPPHKANLGLDYRLPKWWLLLLLTRYYGGRYVTPPSGR 586
|
730 740
....*....|....*....|....*.
gi 515558517 783 KDQTFAGKVITDLGVAYNFTSTLSAN 808
Cdd:COG4771 587 LEGYTPGYTLLDLRASYKLTKNLTLS 612
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
116-860 |
4.55e-52 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 193.05 E-value: 4.55e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 116 AEDLKSSGQVTFDKMLAYkIPSFNSSSQAISDAtahfDPADLRGLGPSRTLVLVNGKRKNQSALVYINDTPgkgevgtdm 195
Cdd:cd01347 7 AEDIEKQPATSLADLLRR-IPGVSVTRGGGGGG----STISIRGFGPDRTLVLVDGLPLASSNYGRGVDLN--------- 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 196 kSIPFSAIERVEVLRDGASAQYGSDAIAGVVNIILKKQTNFTEVSLTSGVTSQGDGFNFGA--DLNSGFKIADKGFVNFN 273
Cdd:cd01347 73 -TIPPELIERVEVLKGPSSALYGSGAIGGVVNIITKRPTDEFGGSVTAGYGSDNSGSSGGGgfDVSGALADDGAFGARLY 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 274 ISYLAQNktnragkpgkddlfGVAADDAQWGDWLSRNPDLgmtiglpdskMGAFvvnaEYPLSEVTTVYAFGDVNIRK-- 351
Cdd:cd01347 152 GAYRDGD--------------GTIDGDGQADDSDEERYNV----------AGKL----DWRPDDDTRLTLDAGYQDQDad 203
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 352 GTSYALYRAPYWVSDPNNLLHEAGTTYNGFQPTFETDIFDNLGSIGLRSNVFGFNADFSLTAGSNKVDYTVGNSLNVSLG 431
Cdd:cd01347 204 GPGGTLPANGTGSSLGGGPSSNTNGDRDWDYRDRYRKRASLGLEHDLNDTGWTLRANLSYSYTDNDGDPLILNGGNNAAG 283
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 432 ANSPTQFEAGGYTFSQLVGNADFSRTFD----KVTFGFGTEIRREQFEARagqeesyvgggaqsfpglqpanalketrsN 507
Cdd:cd01347 284 GDLGRSGYSSERDTTQLGFDAGLNAPFGtgpvAHTLTLGVEYRREELDEK-----------------------------Q 334
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 508 VGVYTTLDYDMSEAFLIGGSIRYENY--------------SDFGDNISWKVSSRYKLTNDVAIRASFSTGFRAPALHQIY 573
Cdd:cd01347 335 TALYAQDTIELTDDLTLTLGLRYDHYdqdskdtiaggttaKKSYSHWSPSLGLVYKLTDGLSLYASYSQGFRAPSLGELY 414
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 574 lsniqtlvsggrisnqgtFNNVDPAVIGLGVPKLDAEESQNIATGITFRSGANFSASLDFYHIKVRNRVLFSGEVgfdgd 653
Cdd:cd01347 415 ------------------GGGSHGGTAAVGNPNLKPEKSKQYELGLKYDPGDGLTLSAALFRIDIKNEIVSTPTN----- 471
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 654 dtttnpveevlldNDITSMKFFINAVNTITKGVDVVLNYkNLEIGTGrLGLNLASNIANTKIDgkigtpailsangydif 733
Cdd:cd01347 472 -------------TGLGLVTVYVNGGKARIRGVELEASY-DLTDGLG-LTGSYTYTDTEVKRT----------------- 519
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 734 NRKEQGRILSARPNTKVLLGMNYDLNKT--TFIFNNTYFGEvTWQHATDVAKDQTFAGKVITDLGVAYNFTSTLSANVMV 811
Cdd:cd01347 520 DGATTGNRLPGIPKHTANLGLDYELPDEglTAGGGVRYRGK-QYADTANGNNTVKVPGYTLVDLSASYQFTKNLTLRLGV 598
|
730 740 750 760
....*....|....*....|....*....|....*....|....*....
gi 515558517 812 NNLLNvypdlldtkGDVVTDLGGRFKYAWEVNQfgfSGTTFTAGLNFKF 860
Cdd:cd01347 599 NNLFD---------KDYYTSLSVRGSGLYGYYG---PGRTYYLSVSYKF 635
|
|
| CirA |
COG1629 |
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism]; |
89-816 |
5.26e-43 |
|
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
Pssm-ID: 441236 [Multi-domain] Cd Length: 644 Bit Score: 166.54 E-value: 5.26e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 89 LDEVVVTGNRSkVRSVLNSAVPIDKLYAEDLKSSGQVTFDKMLAYkIPSFNSSSQAISDATAHfdpadLRGLG--PSRTL 166
Cdd:COG1629 1 LEEVVVTATRT-DESLQDVPGSVSVISREQLEDQPATDLGDLLRR-VPGVSVTSAGGGAGQIS-----IRGFGggGNRVL 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 167 VLVNGkrknqsalVYINDTPGkgeVGTDMKSIPFSAIERVEVLRDGASAQYGSDAIAGVVNIILKKQTNFTEVSLTSGVT 246
Cdd:COG1629 74 VLVDG--------VPLNDPSG---GDGGLSYIDPEDIERVEVLRGPSSALYGSGALGGVINIVTKKPKDGKGGEVSASYG 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 247 SQGDgFNFGADLNSGfkiADKGFVNFNISYLAQNktnragkpgkddlfgvaaddaqwgDWLSRNpdlgmtiglpDSKMGA 326
Cdd:COG1629 143 SYGT-YRASLSLSGG---NGKLAYRLSASYRDSD------------------------GYRDNS----------DSDRYN 184
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 327 FVVNAEYPLSEVTTVYAFGDVNIRKGTSYALYrapywvsdPNNLLHEAGTTYNGFQPTFE--TDIFDNLGSIGLRSNVFG 404
Cdd:COG1629 185 LRAKLGYQLGDDTRLTLSASYSDSDQDSPGYL--------TLAALRPRGAMDDGTNPYSNdtDDNTRDRYSLSLEYEHLG 256
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 405 FNADFSLTAGSNKVDYTVGNSLNVSLGANSPTQFEAGGYTFSQLVGNADFSRTF-DKVTFGFGTEIRREQFEARagqeES 483
Cdd:COG1629 257 DGLKLSASAYYRYDDTDLDSDFTPTPADGGTLEQTDFDNRTYGLELRLTYDLGFgGKHTLLVGLDYQRQDLDGS----GY 332
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 484 YVGGGAQSFPGLQPANALKETRSNVGVYTTLDYDMSEAFLIGGSIRYENYSDFGD----------------NISWKVSSR 547
Cdd:COG1629 333 PLDLGSGSLPTLTSGADDDGTTTSLALYAQDTYKLTDKLTLTAGLRYDYVSYDVDdtvtgtdsasgsrsysAFSPSLGLT 412
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 548 YKLTNDVAIRASFSTGFRAPALHQIYLSNIQTLVsggrisnqgtfnnvdpavigLGVPKLDAEESQNIATGITFRS-GAN 626
Cdd:COG1629 413 YQLSPNLSLYASYSRGFRAPTFGELYANGTDPYS--------------------VGNPDLKPETSTNYELGLRYRLlDGR 472
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 627 FSASLDFYHIKVRNRVLFSGEVGFDGDDTttnpveevlldnditsmkFFINAVNTITKGVDVVLNYKNleigTGRLGLNL 706
Cdd:COG1629 473 LSLSLALFYSDVDNEILSVPLPNDSGFST------------------YYTNAGKARSYGVELELSYQL----TPGLSLNA 530
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 707 ASNIANTKIDGKIGTPAILSangydifnrkeqGRILSARPNTKVLLGMNYDLNKT-TFIFNNTYFGEvtwQHATDVAKDQ 785
Cdd:COG1629 531 SYSYTDAKFDDDTDGSADLD------------GNRLPGVPPLTANLGLTYEFPGGwSLGLGVRYVGD---RYLDDANTQG 595
|
730 740 750
....*....|....*....|....*....|.
gi 515558517 786 TFAGKVITDLGVAYNFTSTLSANVMVNNLLN 816
Cdd:COG1629 596 APGGYTLVDLGAGYRFGDNLTLSLGVDNLFD 626
|
|
| OMP_RagA_SusC |
TIGR04056 |
TonB-linked outer membrane protein, SusC/RagA family; This model describes a distinctive clade ... |
11-695 |
5.82e-25 |
|
TonB-linked outer membrane protein, SusC/RagA family; This model describes a distinctive clade among the TonB-linked outer membrane proteins (OMP). Members of this family are restricted to the Bacteriodetes lineage (except for Gemmatimonas aurantiaca T-27 from the novel phylum Gemmatimonadetes) and occur in high copy numbers, with over 100 members from Bacteroides thetaiotaomicron VPI-5482 alone. Published descriptions of members of this family are available for RagA from Porphyromonas gingivalis, SusC from Bacteroides thetaiotaomicron, and OmpW from Bacteroides caccae. Members form pairs with members of the SusD/RagB family (pfam07980). Transporter complexes including these outer membrane proteins are likely to import large degradation products of proteins (e.g. RagA) or carbohydrates (e.g. SusC) as nutrients, rather than siderophores. [Transport and binding proteins, Unknown substrate]
Pssm-ID: 274948 [Multi-domain] Cd Length: 981 Bit Score: 111.91 E-value: 5.82e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 11 QTIKGIVTDENGQPLPYSNVIEKETSNGVTTDGNGNFEIKVkgfPV--TLIAKYVGFQNKSIEVNSASaAIVFKLDP-NN 87
Cdd:TIGR04056 1 ITVTGVVVDETGEPLIGASVVVKGTTNGTITDIDGNFSLKV---PPgaVLVFSYIGYKTQEVKVKGQK-NLNITLKEdTQ 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 88 SLDEVVVT--GNRSKvRSVLNSAVPIDklyAEDLKSSGQVTFDKMLAYKIPSFN---SSSQAISDATAHfdpadLRGlgp 162
Cdd:TIGR04056 77 ELDEVVVVgyGTQKK-KSLTGAVSTVK---AKELKKVPVSNLSNALQGKVAGVIitqSSGEPGGDAEIW-----IRG--- 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 163 SRTLvlvNGkrkNQSALVYINDTPGkgevGTDMKSIPFSAIERVEVLRDGAS-AQYGSDAIAGVVNIILKK-QTNFTEVS 240
Cdd:TIGR04056 145 ISSF---GG---NNSPLYVIDGVPR----DNGLSDLNPEDIESISVLKDASAtAIYGSRGANGVILITTKRgKEGKPKIS 214
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 241 LTSGVTSQG--------DGFNFGADLNSGFKIADKGFVN-FNISYLAQNKTNRAGKPG-----KDDLFGVAA-------- 298
Cdd:TIGR04056 215 YNAEFGFSTptrlpemlNAYEYAELYNEALLNRGSSPPDiYTDEEIEAYRNGLDPDLYpntdwQDEIFKRTAfnqrhnls 294
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 299 -----DDAQWGDWLSRNPDLGMTIGLpDSKMGAFVVNAEYPLSEVTTV-----YAFGDVNIRKGTSYALYRA-------- 360
Cdd:TIGR04056 295 vsggtEKARYYVSLGYYNEEGILKNS-DYKRYNFRANIDAKLTKTLKLslnvsGSLSKYNNPGGSTSNIWGAlmlfprgt 373
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 361 PYWV-------------SDPNNLLHEAGTTYNGFQPTFETDIFDNLGSI-----GLRsnvfgFNADFSLTAGSNK-VDYT 421
Cdd:TIGR04056 374 PYSTppvysdgyypaynSGNTSLQNPYALLNRGYNENERNRLNGNASLEqkitkGLK-----LKGTFSYDYSNYKnKKYY 448
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 422 VGNSLNVSLGANSPTQFEAGGYTFSQLVGNA--DFSRTFDKVTFG--FGTEIRREQFEARAGQEESYVGGGAQSfpGLQP 497
Cdd:TIGR04056 449 KNPYYYNATGGANNGYYSESNSRSRNYYLEAtlNYNRTFGKHNVSalLGYSQQENKSSSYGGLLDDLPSLDAGT--SDAS 526
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 498 ANALKETRSNVGVYTTLDYDMSEAFLIGGSIRYENYSDFGDN----------ISWKVsSRYKLTNDVA-------IRASF 560
Cdd:TIGR04056 527 VSGSDSEYRLQSLFGRATYSYKDRYLLEFNFRYDGSSRFAKGnrwgffpsvsLGWRI-SEEKFMKKLKkwlsflkLRASY 605
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 561 -STGFRAPALHQIYLSNIqTLVSGGRISNQGTFNNVDPAVIG-LGVPKLDAE--ESQNIATGITFRSGaNFSASLDFYHI 636
Cdd:TIGR04056 606 gIVGNDNIGDRYPYLSLY-NLGDGGYNFGTNNGTSVTGITESrYGNPNLKWEktKKWNLGLDLGFFNN-RLSLTVDYYYK 683
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 515558517 637 KVRNrVLFS----GEVGFdgddttTNPveevlldnditsmkfFINAVNTITKGVDVVLNYKNL 695
Cdd:TIGR04056 684 KTKD-ILQSrslpSVTGY------SSP---------------YANIGKVKNKGVELSLNYRNK 724
|
|
| BtuB |
COG4206 |
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism]; |
92-386 |
1.51e-22 |
|
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];
Pssm-ID: 443355 [Multi-domain] Cd Length: 276 Bit Score: 98.41 E-value: 1.51e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 92 VVVTGNRSKvRSVLNSAVPIDKLYAEDLKSSGQVTFDKMLAyKIPSFNSSSQAISDATAHFDpadLRGLGPSRTLVLVNG 171
Cdd:COG4206 1 VVVTATRLE-QSKSDLTGSVTVIDAEELERSGATSLADALR-RVPGVQVSSSGGPGSAASIS---IRGLGSNQTLVLIDG 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 172 krknqsalVYINDtPGKGevGTDMKSIPFSAIERVEVLRDGASAQYGSDAIAGVVNIILKKQTNFTEVSLTSGVTSQGdG 251
Cdd:COG4206 76 --------VPLND-PSLG--GVDLSLIPPDDIERIEVLKGAASALYGSDAIGGVINITTKKGKKGFKGSVSASYGSFG-T 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 252 FNFGADLNSGfkiADKGFVNFNISYL-AQNKTNRAGKPGKDDLFGVAADDAQWGDWLSRNPDLGMTIGLPDSKMGaFVVN 330
Cdd:COG4206 144 RRLSASLSGG---AGKFSYSLSASYRrSDGYRYNDPDLRNNDGYENTSLNARLGYKLGDNGSLSLSGGYSDSERG-YPGA 219
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 515558517 331 AEYPLSEVTTVYAFGDVNIRKGTSYALYRAPYWVSDPNNLLHEAGTTYNGFQPTFE 386
Cdd:COG4206 220 VGSDRNLRLSLSLEYKLSDGWSLLLLAYYYYDRDYEDGGGDSAGTSNTDGARAGLS 275
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
339-819 |
3.55e-22 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 101.00 E-value: 3.55e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 339 TTVYAFGDVNIRKGTSYALYRAPYWVSDPNNLLHEAGTTYNGFQPTFETDIFD---NLGSIGLR---SNVFGFNADFSLT 412
Cdd:pfam00593 5 SLDLLGDDTLLTLGYDYSRYTDGLDLGLTLDGYGNDGGYLGDRPLYYGRDYSDtdrKRLSLGYDydlGDGLSWLSTLRLG 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 413 AGSNKVDYTVGNSLNvSLGANSPTQFEAGGYTFSQLVGNADFSRTFD-KVTFGFGTEIRREQFEARAGQEESYVGGgaqs 491
Cdd:pfam00593 85 LRYSSLDGDYTSNSS-GLSGAGDYLSDDRLYGLYGLDGDLELSLDLShDLLLGVELRTAGLDYRRLDDDAYDPYDP---- 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 492 fPGLQPANALKETRSNVGVYTTLDYDMSEAFLIGGSIRYENYSDFGDN--------------ISWKVSSRYKLTNDVAIR 557
Cdd:pfam00593 160 -ANPSSSSYSDTTTDSYGLYLQDNIKLTDRLTLTLGLRYDHYSTDGDDgngggdnfsrsysaFSPRLGLVYKPTDNLSLY 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 558 ASFSTGFRAPALHQIYlsniqtlvsggrisnqGTFNNVDPAVIGLGVPKLDAEESQNIATGITFRSGaNFSASLDFYHIK 637
Cdd:pfam00593 239 ASYSRGFRAPSLGELY----------------GSGSGGGGGAVAGGNPDLKPETSDNYELGLKYDDG-RLSLSLALFYID 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 638 VRNRVLFSGEVGFDGDDTTTnpveevlldnditsmkfFINAVNTITKGVDVVLNYKNLEIGTGRLGLNLASNIANTKIDG 717
Cdd:pfam00593 302 IKNLITSDPDGPGLGGTVYT-----------------YTNVGKARIRGVELELSGRLWGLGLSGGGYTYTDADDDADADD 364
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 718 KigtpailsangydifnrkeqGRILSARPNTKVLLGMNYDLNKTTFIFNN----TYFGEVTWqhaTDVAKDQTFAGKVIT 793
Cdd:pfam00593 365 T--------------------GNPLPNVPRHTANLGLTYDFPLGGWGARLgaryVGSGERRY---GDAANTFKTPGYTLV 421
|
490 500
....*....|....*....|....*.
gi 515558517 794 DLGVAYNFTSTLSANVMVNNLLNVYP 819
Cdd:pfam00593 422 DLSAGYRLNKNLTLRLGVNNLFDKYY 447
|
|
| PRK13484 |
PRK13484 |
IreA family TonB-dependent siderophore receptor; |
157-860 |
3.74e-22 |
|
IreA family TonB-dependent siderophore receptor;
Pssm-ID: 139605 [Multi-domain] Cd Length: 682 Bit Score: 102.01 E-value: 3.74e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 157 LRGLGPSRTLVLVNGKRKNQsalvyiNDTPGKGEVGTDMKSIP-FSAIERVEVLRDGASAQYGSDAIAGVVNIILKKQTN 235
Cdd:PRK13484 90 IRGLSGDYTLILVDGRRQSG------RESRPNGSGGFEAGFIPpVEAIERIEVIRGPMSSLYGSDAIGGVINIITKPVNN 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 236 FT-EVSLTSGVTSQGDGfNFGADLN-----SGFKIADK-GFVNFNISYLAQNKTNRAGKPGKDdlfgvaaddaqwgdwls 308
Cdd:PRK13484 164 QTwDGVLGLGGIIQEHG-KFGNSTTndfylSGPLIKDKlGLQLYGGMNYRKEDSISQGTPAKD----------------- 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 309 rNPDLGMTIglpdskmgAFVvnaeyPLSEVTTVYAFGDVNIRK----GTSYALYRAPYWVSDPNNLLhEAGTTYNGFQPT 384
Cdd:PRK13484 226 -NKNITATL--------QFT-----PTESQKFVFEYGKNNQVHtltpGESLDAWTMRGNLKQPNSKR-ETHNSRSHWVAA 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 385 fetdiFDNLGSIgLRSNVFGFNADFSLTAGSNKVDYTVGNSLNvslgansptqFEAGGYTFSQLVGNADFSRTFDKVTFG 464
Cdd:PRK13484 291 -----WNAQGEI-LHPEIAVYQEKVIREVKSGKKDKYNHWDLN----------YESRKPEITNTIIDAKVTAFLPENVLT 354
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 465 FGTeirreQFEARAGQEESYVGGG---AQSFPGLQPAnalketrsnvgVYTTLDYDMSEAFLIGGSIRYENYSDFGDNIS 541
Cdd:PRK13484 355 IGG-----QFQHAELRDDSATGKKtteTQSVSIKQKA-----------VFIENEYAATDSLALTGGLRLDNHEIYGSYWN 418
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 542 WKVSSRYKLTNDVAIRASFSTGFRAPALHQIYlSNIQTLVSGGRisnqgtfnnvdpaVIGLGVPKLDAEESQNIATGITF 621
Cdd:PRK13484 419 PRLYAVYNLTDNLTLKGGIAKAFRAPSIREVS-PGFGTLTQGGA-------------SIMYGNRDLKPETSVTEEIGIIY 484
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 622 RSGANFSASLDFYHIKVRNRvLFSGEVGfdgddtTTNPveevlldndITSMKFFI--NAVNTITKGVDVVLN---YKNLE 696
Cdd:PRK13484 485 SNDSGFSASATLFNTDFKNK-LTSYDIG------TKDP---------VTGLNTFIydNVGEANIRGVELATQipvYDKWH 548
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 697 IGTGRLGLNLASNIANTKIDGKigtpailSANGYDIfnrkeqgrILSARPNTKVLLGMNYDlNKTTFIFNNTYFGEVTWQ 776
Cdd:PRK13484 549 VSANYTFTDSRRKSDDESLNGK-------SLKGEPL--------ERTPRHAANAKLEWDYT-QDITFYSSLNYTGKQIWA 612
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 777 HATDVAKDQTF-AGKVITDLGVAYNFTStlsaNVMVN-NLLNVypdlLDTKGDVVTDLGGRfkyaWEVNQfgfsGTTFTA 854
Cdd:PRK13484 613 AQRNGAKVPRVrNGFTSMDIGLNYQILP----DTLINfAVLNV----TDRKSEDIDTIDGN----WQVDE----GRRYWA 676
|
....*.
gi 515558517 855 GLNFKF 860
Cdd:PRK13484 677 NVRVSF 682
|
|
| TonB-hemlactrns |
TIGR01786 |
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model ... |
90-816 |
4.69e-21 |
|
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model represents a family of TonB-dependent outer membrane receptor/transporters acting on iron-containing proteins such as hemoglobin, transferrin and lactoferrin. Two subfamily models with a narrower scope are contained within this model, the heme/hemoglobin receptor family protein model (TIGR01785) and the transferrin/lactoferrin receptor family model (TIGR01776). Accessions which score above trusted to this model while not scoring above trusted to the more specific models are most likely to be hemoglobin transporters. Nearly all of the species containing trusted hits to this model have access to hemoglobin, transferrin or lactoferrin or related proteins in their biological niche. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273808 [Multi-domain] Cd Length: 715 Bit Score: 98.64 E-value: 4.69e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 90 DEVVVTGNRSKVRSVL-NSAVPIDK--LYAEDLKSSGQVTFDKMLAYkIP--SFNSSSQAISDATAhfdpadLRGLGPSR 164
Cdd:TIGR01786 1 DTITVTATRTADPQRRdLSVTPASVsvISREQLKSQQVRNLRDLLRY-EPgvSVVEGGRGGSQGIN------IRGLDKNR 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 165 TLVLVNGKRKNQSalvyindTPGKGEVGTDMKSIPFSAIERVEVLRDGASAQYGSDAIAGVVNIILKKQTNFtevsLTSG 244
Cdd:TIGR01786 74 VAVLVDGIRQNTS-------YGGQGSTFYAINSIDPELIKSIEIVKGASSSLYGSGALGGVVAFRTKDAADL----LKPG 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 245 VtsqgdgfNFGADLNSGFKIADKGFVNfNISYLAQNktnragkpgkDDLFGVAADDAQWGDWLSRNPDLGMTIGLPDSKM 324
Cdd:TIGR01786 143 K-------DLGGLSKLGYSSANNRFTQ-SVAAAGRN----------DDVDALVQATYRRGHELKNGNKANIGNESKRSKP 204
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 325 G--AFVVNA-----EYPLS-----EVTTVYAFGDVNIRKGTSYALYRAPYWVSDPN---------NLLHEAGTTY--NGF 381
Cdd:TIGR01786 205 NpsDYKSQSflaklGWQLNdahrlGLSLEYTQTDYDEPEMTNTSYLTKPLGAPLLSstvvlgdskTRDRRTGLDYelNPD 284
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 382 QPTFETDIFD-NLGSIGLRSNVFGFNAdfsltAGSNKVDYTVGNslnvslgaNSPTQFEAGGYTFSqlvgnadFSRTFDK 460
Cdd:TIGR01786 285 NSWLDTVKLAlDKQYIQLYNYLNATSA-----SDYPGVDKNGRY--------KDKYDYYTLGFDTN-------NKIEFSV 344
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 461 V--TFGFGTEIRREQFEARAGQEESYVggGAQSFPGLQPANAlKETRSNVGVYTTLDYDMSEAFLIGGSIRYENY----- 533
Cdd:TIGR01786 345 HslSLTYGLDRFKDKVSTGDSRRNLPT--AAYNLYGYEGENR-PVKGSNFGLFLQDNIKLGDWLSLSAGLRYDHYktdpk 421
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 534 ----------SDFGDNISWKVSSRYKLTNDVAIRASFSTGFRAPALHQIYlsniqtlVSGGRISnqgtfnnvDPAVIGLG 603
Cdd:TIGR01786 422 adeskdygaiSKTYSRWSPSLGLTYKPTPWLTLYYSYSQGFRAPSFDELY-------GTGAHPG--------GGPYTFLP 486
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 604 VPKLDAEESQNIATGITFRSG-ANFSASLdfYHIKVRNRVLfsgevgfdgddtTTNPVEEVLLDNDITSMKF--FINAVN 680
Cdd:TIGR01786 487 NPNLKPETSKNWEIGINLHFDqLDFKVSY--FRNDYKDFID------------LGIGVTAKGNMAQVGSNTItnYVNIDN 552
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 681 TITKGVDVVLNYKNLEIGTGRLGLNLASNIANTKidGKigtpailsangydifnRKEQGRILSARPNTKVLLGMNYDLNK 760
Cdd:TIGR01786 553 ARIRGIELSGRYDLGSFFSGPDGWTTTLKYGYTK--GK----------------DSDTNPWLNAITPLKVVLGLGYDHPD 614
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 515558517 761 TTFIF--NNTYFGE-------VTWQHATDVAKDQTF--AGKVITDLGVAYNFTSTLSANVMVNNLLN 816
Cdd:TIGR01786 615 EKWGVglTLTFSGAkdavdayATYYENGEAAKAGPLrtPSYTVVDLYGYYKPNKNLTLRFGVYNLLD 681
|
|
| FecA |
COG4772 |
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism]; |
75-816 |
1.52e-19 |
|
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
Pssm-ID: 443804 [Multi-domain] Cd Length: 681 Bit Score: 93.84 E-value: 1.52e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 75 ASAAIVFKLDPNNSLDEVVVTGNRSKVRSVLNSAVPIDKLYAEDLKSSGQVTFDKMLAY----KIPSFNSSSQA--ISda 148
Cdd:COG4772 9 LLLAAAAAAEAATTLETVVVTGSRAAEARLKDVPGSVSVVDREELENQAATSLREVLRRvpgvNVQEEDGFGLRpnIG-- 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 149 tahfdpadLRGLGPSRT---LVLVNGkrknqsalVYINDTP-GKGEVGTDMksiPFSAIERVEVLRDGASAQYGSDAIAG 224
Cdd:COG4772 87 --------IRGLGPRRSrgiTLLEDG--------IPIAPAPyGDPAAYYFP---DLERMERIEVLRGAAALRYGPQTVGG 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 225 VVNIILKkqTNFTEVSLTSGVTSQGDGFnFGADLNSGFKIADkgfVNFNISYlaqnkTNRAGKPGKDDlfgvaaddaqwg 304
Cdd:COG4772 148 AINFVTR--TIPTAFGGELRVTGGSFGY-RRTHASVGGTVGN---FGYLVEY-----SRKRGDGFRDN------------ 204
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 305 dwlsrnpdlgmtiglPDSKMGAFVVNAEYPLSEVTTVYA-FGDVNIRKGT----SYALYRA-PYWVSDPNNllhEAGTTY 378
Cdd:COG4772 205 ---------------SGFDINDFNAKLGYRLSDRQELTLkFQYYDEDANTpgglTDAQFDAdPRQSYRPAD---QFDTRR 266
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 379 NGFQPTFETDIFDNLgsiglRSNVFGFNADFSLTaGSNKVDYTVGNSLNVSLGANsPTQFEAGGytfsqlvGNADFSRTF 458
Cdd:COG4772 267 TQLSLRYEHQLSDNT-----TLTTTAYYNDFSRN-WYIRQNTADPNTPGLGLRGN-PRGYRSYG-------IEPRLTHRF 332
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 459 D----KVTFGFGTEIRREQFEARagqeeSYVGGGAQSFPGLQPANALKETRSNVGVYTTLDYDMSEAFLIGGSIRYENYS 534
Cdd:COG4772 333 ElggvPHTLEVGLRYHREEEDRK-----QYVNTYGQGRSGAGLRRDRRFSADALAAYAQNRFELTGRLTLTPGLRYEHIR 407
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 535 ---------DFGDNISWKVSS---------RYKLTNDVAIRASFSTGFRAPalhqiylsniqtlvsggrisnqgTFNnvD 596
Cdd:COG4772 408 rdrtdrystRTGGDDSGSNSYseflpglglLYQLTDNLQLYANVSRGFEPP-----------------------TFG--D 462
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 597 PAVIGLGVPKLDAEESQNIATGITFRSGANFSASLDFYHIKVRNRVLFSGEVGFDGDDTTtnpveevlldnditsmkffi 676
Cdd:COG4772 463 LAYGNGGNPDLKPEKSWNYELGTRGRIGNGLSAEVALFYIDYDNELGSCSAAGGDRSTFT-------------------- 522
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 677 NAVNTITKGVDVVLNYKNLEIGTGRLGLNLASNIANTKIDGKIGTPailsangydifnrkEQGRILSARPNTKVLLGMNY 756
Cdd:COG4772 523 NAGETRHQGLELALDYDLLKGGGLGLPLFAAYTYTDAEFTSDFGPV--------------FAGNRLPYVPRHQLTAGLGY 588
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 515558517 757 DLNKTTFIFNNTYFGEVTWQHATDVAKDQTfaGKV----ITDLGVAYNFTSTLSANVMVNNLLN 816
Cdd:COG4772 589 EHGGWTANLNGRYVSEQFTDAANTVADGSF--GKIpsytVLDLSASYDFGKNLSLFAGVNNLFD 650
|
|
| TonB-hemin |
TIGR01785 |
TonB-dependent heme/hemoglobin receptor family protein; This model represents the ... |
89-816 |
1.75e-19 |
|
TonB-dependent heme/hemoglobin receptor family protein; This model represents the TonB-dependent outer membrane heme/hemoglobin receptor/transporter found in bacteria which live in contact with animals (which contain hemoglobin or other heme-bearing globins) or legumes (which contain leghemoglobin). Some species having hits to this model such as Nostoc, Caulobacter and Chlorobium do not have an obvious source of hemoglobin-like proteins in their biological niche and so the possibility exists that they act on some other substance. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273807 [Multi-domain] Cd Length: 665 Bit Score: 93.61 E-value: 1.75e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 89 LDEVVVTGNRSKVRSVLnSAVPIDKLYAEDLKSSGQVTFDKMLAYkIP------SFNSSSQAISdatahfdpadLRGLGP 162
Cdd:TIGR01785 1 LDTVTVTATRTRQVLSE-APASVSVISGEQIESKQANNLADALNT-VPgvdvtgGGRPPGQSIN----------IRGLQD 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 163 SRTLVLVNGKRKNqsalvyinDTPGKGEVGTDmkSIPFSAIERVEVLRDGASAQYGSDAIAGVVNIILKKQTNF------ 236
Cdd:TIGR01785 69 NRVLVVVDGARQN--------YQRGGAHNGSL--FVDPELLKRIEIVKGPSSSLYGSGALGGVVAFRTKDAADLlrpgql 138
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 237 --TEVSLTSGVTSQGDGFNFGAD---------LNSGFKIADKGFVNFNISYLAQNKTNRAGKPGKddlFGVAADDAQWGD 305
Cdd:TIGR01785 139 fgGLAKLSYGSNNNSFGGSVAVAgrlddnldaLVAATYRDGGNYRNGNKEEATNSAYVQKNLLAK---LGWQLDDAQRLE 215
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 306 WLSRNPDLGMTIglPDSKMGafvvNAEYPLSEVTTVYAfgDVNIRKGTSYALYRAPywvsdPNNLLHEAgttynGFQPTF 385
Cdd:TIGR01785 216 FSYFTTEGSLDE--AQNSGP----GTEYVLGSSSTLLA--SSTRDRSATLTYNWTP-----EDNPWLDA-----TASLYY 277
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 386 ETDIFDNlgsigLRSNVFGFNadfsltagSNKVDYTvgnslnvSLGANSPTQFEAGGYTFSQLVGNADFSRtfDKVTfgf 465
Cdd:TIGR01785 278 NRTENDN-----DRSARGVGR--------EEGYQYT-------TYGATLQNTSRFDVASWSTLTYGVDWMK--DKRR--- 332
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 466 gTEIRREqfearagqeesyvgggaqSFPGLQPANALKETRSNVGVYTTLDYDM-SEAFLIGGSIRYENYS---------- 534
Cdd:TIGR01785 333 -TESFDP------------------NSVTTIVPNPPSAKEYFFGLFLQDNIPLlDDRLTLSAGLRYDHYKlspkttadte 393
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 535 --DFGDN-ISWKVSSRYKLTNDVAIRASFSTGFRAPALHQIYlsniqtlVSGGRISNQGTFNNVdpaviglGVPKLDAEE 611
Cdd:TIGR01785 394 avDRSYSrWSPSLGLSYKPVDWLTLYASYSQGFRAPSIDELY-------GTGDHPGTPGGYTFA-------PNPNLKPET 459
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 612 SQNIATGITFRSGANFSA--SLDFYHIKVRNRVLFSGEVGFDGDDTTTNPVeevlldNDITSmkfFINAVNTITKGVDVV 689
Cdd:TIGR01785 460 SKTWELGANLSFDNLLLDndQLQFKVAYFYNDVKDFIDLTIGVTDNVTAGM------NNITQ---YVNIDGARIRGIEAS 530
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 690 LNYKnleigTGRLGLNLASniantkidgkigtpailsanGYDIFNRKEQGRILSARPNTKVLLGMNYDLNKTTFIFN--- 766
Cdd:TIGR01785 531 ASYD-----AGLWATGLSY--------------------GYTIGKDQNTNQWLSNIPPLKLVVTVGYRFPDRRLDLGaka 585
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....
gi 515558517 767 NTYFGEVTWQHATDVAKDQTF--AGKVITDLGVAYNFTST--LSANVMVNNLLN 816
Cdd:TIGR01785 586 AYYERQSESPTTEDVAANGLLttPGYTVVDLYATYQPNAVkgLTVRFGVNNLTD 639
|
|
| PRK13486 |
PRK13486 |
TonB-dependent receptor; |
157-860 |
3.04e-19 |
|
TonB-dependent receptor;
Pssm-ID: 139606 [Multi-domain] Cd Length: 696 Bit Score: 92.78 E-value: 3.04e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 157 LRGLGPSRTLVLVNGKRKNQSALVYINdtpGKGEVGTDMKSiPFSAIERVEVLRDGASAQYGSDAIAGVVNIILKKQTNF 236
Cdd:PRK13486 88 IRGMPASYTLILIDGVRQGGSSDVTPN---GFSAMNTGFMP-PLAAIERIEVIRGPMSTLYGSDAMGGVVNIITRKNADK 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 237 TEVSLTSGVTSQgdgfnfgadlnsgfkiadkgfvnfnisylaqnKTNRAGkpgkddlfgvaaDDAQWGDWlSRNPDlgmt 316
Cdd:PRK13486 164 WLSSVNAGLNLQ--------------------------------ESNKWG------------NSSQFNFW-SSGPL---- 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 317 igLPDSkmgafvvnaeyplsevTTVYAFGDVNIRKGTSY------ALYRAPYWVSDPNnllHEAGTTYNgFQPTFETDIF 390
Cdd:PRK13486 195 --VDDS----------------VSLQVRGSTQQRQGSSVtslsdtAATRIPYPTESQN---YNLGARLD-WKASEQDVLW 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 391 DNLGSIGLRSNvfgfNADFSLTAGSNKVDYTVGNSLN-VSLGANSptqfeagGYTFSQLVGNADFSRTFDKVTFGFGTEI 469
Cdd:PRK13486 253 FDMDTTRQRYD----NRDGQLGSLTGGYDRTLRYERNkISAGYDH-------TFTFGTWKSYLNWNETENKGRELVRSVL 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 470 RREQFeARAGQE-------------------ESY---VGGGAQSfPGLQPANALKET-----RSNVGVYTTLDYDMSEAF 522
Cdd:PRK13486 322 KRDKW-GLAGQPrelkesnlilnsllltplgESHlvtVGGEFQS-SSMKDGVVLASTgetfrQKSWSVFAEDEWHLTDAL 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 523 LIGGSIRYENYSDFGDNISWKVSSRYKLTNDVAIRASFSTGFRAPALHQIYLSniqtlVSGgrISNQGTFNNvdpavigL 602
Cdd:PRK13486 400 ALTAGSRYEHHEQFGGHFSPRAYLVWDVADAWTLKGGVTTGYKAPRMGQLHKG-----ISG--VSGQGKTNL-------L 465
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 603 GVPKLDAEESQNIATGITFRSGANFSASLDFYHIKVRNRVlfsgeVGFDGDDTTTNpveevlldnditsmkfFINAVNTI 682
Cdd:PRK13486 466 GNPDLKPEESVSYEAGVYYDNPAGLNANVTGFMTDFSNKI-----VSYSINDNTNS----------------YVNSGKAR 524
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 683 TKGVDVVLNYKnLEIGTGRLGLNLASNIANTKIDGKIGTPaiLSANGYDIFNRKEQGRILSarpNTKVLLGMNYdlNKTT 762
Cdd:PRK13486 525 LHGVEFAGTLP-LWSEDVTLSLNYTWTRSEQRDGDNKGAP--LSYTPEHMVNAKLNWQITE---EVASWLGARY--RGKT 596
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 763 FIFNNTYFGEVTWQHATDVAKDQTFAGKVITDLGVAYNFTSTLSANVMVNNLLNV-YPDL-LDTKGDVVTDLGGRFKYAW 840
Cdd:PRK13486 597 PRFTQNYSSLSAVQKKVYDEKGEYLKAWTVVDAGLSWKMTDALTLNAAVNNLLNKdYSDVsLYSAGKSTLYAGDYFQTGS 676
|
730 740
....*....|....*....|
gi 515558517 841 EVNQFGFSGTTFTAGLNFKF 860
Cdd:PRK13486 677 STTGYVIPERNYWMSLNYQF 696
|
|
| PRK13528 |
PRK13528 |
outer membrane receptor FepA; Provisional |
156-642 |
1.42e-18 |
|
outer membrane receptor FepA; Provisional
Pssm-ID: 237413 [Multi-domain] Cd Length: 727 Bit Score: 90.97 E-value: 1.42e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 156 DLRGLGPSRTLVLVNGKR-KNQSALVYindtPGKGEVGT--DMKSIPFSAIERVEVLRDGASAQYGSDAIAGVVNIILKK 232
Cdd:PRK13528 98 DIRGMGPENTLILIDGVPvTSRNSVRY----SWRGERDTrgDTNWVPPEMVERIEVIRGPAAARYGSGAAGGVVNIITKR 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 233 QTNFTEVSLTSgVTSQGDGFNFGADLNsgfkiadkgfVNFNISylaqnktnragkpgkddlfGVAADDA----QWGDWLS 308
Cdd:PRK13528 174 PTNDWHGSLSL-YTNQPESSKEGATRR----------ANFSLS-------------------GPLAGDAltmrLYGNLNK 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 309 RNPDlgmtiglpdskmgAFVVNAEYPlsevtTVYAFGDVNIRKGTSYALYRapyWVSDPNNLLH-EAGTTYNG------F 381
Cdd:PRK13528 224 TDAD-------------SWDINSSAG-----TKNAAGREGVRNKDINGVLS---WKMTPQQILDfEAGYSRQGniyagdT 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 382 QPTFETDIFDNLGSIGLRSNVFgFNADFSLTA------GSNKV----DYTVGNSLNVSLGANSPTQFEAG-GYTFSQLVG 450
Cdd:PRK13528 283 QNSNSSAVTESLAKSGKETNRL-YRQNYGLTHngiwdwGQSRLgfyyEKTNNTRMNEGLAGGGEGRITADqTFTTSRLES 361
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 451 -------NADFSRTFDKvTFGFGTEIRREQFEARAGQEESYVGGGAQSFPGLQPANALKETRSNVGVYTTLDYDMSEAFL 523
Cdd:PRK13528 362 yrtsgelNVPLNWLFEQ-TLTVGAEWNRDELNDPSSTSLTVKDGDIGGISGSAADRSSKNKSEISALYVEDNIEPVPGTN 440
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 524 IGGSIRYENYSDFGDNISWKVSSRYKLTNDVAIRASFSTGFRAPALHQI---YLsniqtLVSGGrisNQGTFNNVDPAVI 600
Cdd:PRK13528 441 LIPGLRFDYHSEFGSNWSPSLNLSQELGDYFKVKAGIARAFKAPNLYQSsegYL-----LYSRG---NGCPKDITSGGCY 512
|
490 500 510 520
....*....|....*....|....*....|....*....|..
gi 515558517 601 GLGVPKLDAEESQNIATGITFRSGaNFSASLDFYHIKVRNRV 642
Cdd:PRK13528 513 LVGNKNLDPEISVNKEIGLEFTVD-DYHASVTYFRNDYQNKI 553
|
|
| CarbopepD_reg_2 |
pfam13715 |
CarboxypepD_reg-like domain; This domain family is found in bacteria, archaea and eukaryotes, ... |
13-94 |
1.86e-17 |
|
CarboxypepD_reg-like domain; This domain family is found in bacteria, archaea and eukaryotes, and is approximately 90 amino acids in length. The family is found in association with pfam07715 and pfam00593.
Pssm-ID: 433425 [Multi-domain] Cd Length: 88 Bit Score: 78.02 E-value: 1.86e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 13 IKGIVTDEN-GQPLPYSNVIEKETSNGVTTDGNGNFEIK-VKGFPVTLIAKYVGFQNKSIEVNSA---SAAIVFKLDP-N 86
Cdd:pfam13715 1 ISGTVVDENtGEPLPGATVYVKGTTKGTVTDADGNFELKnLPAGTYTLVVSFVGYKTQEKKVTVSndnTLDVNFLLKEdA 80
|
....*...
gi 515558517 87 NSLDEVVV 94
Cdd:pfam13715 81 LLLDEVVV 88
|
|
| PRK13483 |
PRK13483 |
ligand-gated channel protein; |
157-816 |
9.49e-17 |
|
ligand-gated channel protein;
Pssm-ID: 184080 [Multi-domain] Cd Length: 660 Bit Score: 84.83 E-value: 9.49e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 157 LRGLGPSRTLVLVNGKRKNQSALVYINDTPGKGEVGTDmksiPFSAIERVEVLRDGASAQYGSDAIAGVVNIILKKQTNF 236
Cdd:PRK13483 93 LRGMGSQYTLILVDGKRQSSRETRPNSDGPGVEQAWTP----PLAAIERIEVIRGPMSSLYGSDAIGGVINIITRKVPNE 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 237 TEVSLTSGVTSQGDgfNFGADLNSGfkiadkgfvNFnisYLAqnktnragKPGKDDLFGVAAddaqWGDWLSRNPDlgmt 316
Cdd:PRK13483 169 WQGEVRLDTTLQEN--SDSGNVYQA---------NF---FVN--------GPLIKDLLGLQL----YGQYTQREED---- 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 317 iglpdskmgafvvnaeyplsevTTVYAFGDVNIRKGTSyalyRAPYWVSDPNNLLHEAGTTyngfqptfetdifdnlgsi 396
Cdd:PRK13483 219 ----------------------DIEGGYRDKDARSLTA----KLALTPNEDHDIMLEVGTS------------------- 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 397 glrsnvfgfNADFSLTAGSNKVDYTVGNSLNVSLG-ANSPTQFEAGGYTFSQlVGNADF--SRTFdkvtfgfgteIRREQ 473
Cdd:PRK13483 254 ---------NQERDSTVGKTVAPLAPGESCGRRGCpESSTTEYERSTVSLSH-TGRWDFgtSDTY----------IQHEE 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 474 FEARA------------------GQEESYVGGGA------QSFPGLQPANALKETRSNVGVYTTLDYDMSEAFLIGGSIR 529
Cdd:PRK13483 314 FDNKSremkikntdfqsslvaplGQEHTLTFGAAynhqdlTDETSNQISDLTDISRTQWAVFSEDEWRIADDFALTGGLR 393
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 530 YENYSDFGDNISWKVSSRYKLTNDVAIRASFSTGFRAPALHQIylsniqtlVSG-GRISNQGtfnNVdpavigLGVPKLD 608
Cdd:PRK13483 394 LDHDENFGGHVSPRVYGVWNLAPSWTVKGGVSTGFRAPSLRQT--------TPDwGQVSRGG---NI------YGNPDLK 456
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 609 AEESQNIATGITFRSGANFSASLDFYHIKVRN---RVLFSGEVGFD-----GDDTTTNpveevlldnditsmkffINAVN 680
Cdd:PRK13483 457 PETSLNKELGLYYDLGSGLTASLTVFYNEFKDkitRVACPATQCTDgpnqfGADPTTY-----------------VNIDE 519
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 681 TITKGVDVVLNYKNLEigtgrlGLNLASNIANTKIDGKIGtpailsangydifnrKEQGRILSARPNTKVLLGMNYdlnK 760
Cdd:PRK13483 520 AVTQGVEASLSYPITS------TLSLSGNYTYTDSEQKSG---------------AYKGSPLNQLPKHLFQASLNW---E 575
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 515558517 761 TTFIFNN----TYFGE----VTWQHATD-VAKDQTFAgkvitDLGVAYNFTSTLSANVMVNNLLN 816
Cdd:PRK13483 576 PTDRLNSwarvNYRGEesqpTTGPSSSSfIAPSYTFL-----DLGANYQLTDNLKLSAGIYNLFD 635
|
|
| PRK13524 |
PRK13524 |
FepA family TonB-dependent siderophore receptor; |
156-815 |
3.39e-16 |
|
FepA family TonB-dependent siderophore receptor;
Pssm-ID: 237410 [Multi-domain] Cd Length: 744 Bit Score: 83.16 E-value: 3.39e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 156 DLRGLGPSRTLVLVNGKRKNQSALVyindTPG-KGEVGT--DMKSIPFSAIERVEVLRDGASAQYGSDAIAGVVNIILKK 232
Cdd:PRK13524 100 DIRGMGPENTLILIDGKPVSSRNSV----RYGwRGERDTrgDTNWVPPEMIERIEVLRGPAAARYGNGAAGGVVNIITKK 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 233 QTNFTEVSLTSgvtsqgdGFNFGADLNSGfkiADKGfVNFNISylaqnktnragKPGKDDLfgvaaddaqwgdwlsrnpD 312
Cdd:PRK13524 176 PTGEWHGSWNT-------YFNAPEHKAEG---ATKR-TNFSLS-----------GPLGDEL------------------S 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 313 LGMTIGLPDSKMGAFVVNAEYPlSEVTTVYAFGDVNIRKGTS----YALYRapyWVSDPNN-LLHEAGTTYNG------F 381
Cdd:PRK13524 216 FRLYGNLNKTQADAWDINQGHQ-SARTGSYAGTLPAGREGVInkdiNGLLR---WDFAPLQsLELEAGYSRQGnlyagdT 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 382 QPTFETDIFDNLgsIGLRSNVFgFNADFSLTAGSN-----------KVDYTVGNSLNVSLGANSPTQFEAGGYTFS---- 446
Cdd:PRK13524 292 QNTNSDALVKSL--YGKETNRM-YRQNYALTHRGGwdngvstsnyaQYEHTRNSRLPEGLAGGTEGIFNEKATQFStidl 368
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 447 -QLVGNADFSRTFD---KVTFGFGTEIRREQFEARAGQEESYVGGGaqSFPGLQPANALKETRS-NVGVYTTLDYDMSEA 521
Cdd:PRK13524 369 dDVMLHSEVNLPFDllvNQTLTLGTEWNQQRMKDPSSNTQALTSGG--AIPGVSATGRSPYSKAeIFSLFAEDNMELTDS 446
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 522 FLIGGSIRYENYSDFGDNISWKVSSRYKLTNDVAIRASFSTGFRAPALHQI---YLsniqtLVSGGrisnQGTFNNVDPA 598
Cdd:PRK13524 447 TMLTPGLRFDHHSIVGNNWSPSLNLSQGLGDDFTLKMGIARAYKAPNLYQTnpnYI-----LYSKG----QGCYASAGNG 517
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 599 VIGLGVPKLDAEESQNIATGITF-RSGANfsASLDFYHIKVRNRVlfsgEVGfdgddtttnpveevlldnditsmkffIN 677
Cdd:PRK13524 518 CYLQGNDDLKAETSVNKEIGLEFkRDGWL--AGLTWFRNDYRNKI----EAG--------------------------YV 565
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 678 AVNTITKGVDVVLNYKN--------LEigtGRLGLNLASNIA-NTKIdgkigTPAILSANgydifnrKEQGRILSARPNT 748
Cdd:PRK13524 566 PVGTNSVGKTDIYQWENvpkavvegLE---GTLNVPVSETVNwTNNL-----TYMLQSKN-------KTTGDPLSIIPEY 630
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 515558517 749 KVLLGMNYDL-NKTTFIFNNTYFGE-------VTWQHATDVAKdQTFAGKVITDLGVAYNFTSTLSANVMVNNLL 815
Cdd:PRK13524 631 TLNSTLSWQAtEDLSLQSTFTWYGKqkpkkynYKGQPVTGSAT-KEVSPYSIVGLSATYDVTKNVSLTGGVDNLF 704
|
|
| Plug |
pfam07715 |
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently ... |
103-225 |
7.17e-16 |
|
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors. It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens the channel.
Pssm-ID: 462243 [Multi-domain] Cd Length: 107 Bit Score: 74.23 E-value: 7.17e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 103 SVLNSAVPIDKLYAEDLKSSGQVTFDKMLAYkIPSFNSSSQAISDATAhfdpADLRGLGPSRTLVLVNGKRKNqsalvyi 182
Cdd:pfam07715 1 DLRDTPGSVSVVTAEDIEDQGATNLADALRG-VPGVSVSSGGGGGGSS----ISIRGFGSNRVLVLVDGVPLN------- 68
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 515558517 183 ndTPGKGEVGTDMksIPFSAIERVEVLRDGASAQYGSDAIAGV 225
Cdd:pfam07715 69 --SGGGGSVDLNS--IDPEDIERVEVLKGPASALYGSGAIGGV 107
|
|
| Fiu |
COG4774 |
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism]; |
197-816 |
5.99e-14 |
|
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];
Pssm-ID: 443806 [Multi-domain] Cd Length: 639 Bit Score: 75.68 E-value: 5.99e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 197 SIPFSAIERVEVLRDGASAQYGSDAIAGVVNIILKK--QTNFTEVSLTSGvtsQGDGFNFGADLNsgFKIADKGFVNFNI 274
Cdd:COG4774 75 RRDTFNLERVEVLKGPASVLYGRGSPGGVINLVTKRptDEPFTEVTLTYG---SDGQRRATLDVN--GPLGDDLAYRLNG 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 275 SYlAQNKTNRAGkpGKDDLFGVAAD-DAQWGDWLSrnpdlgmtiglpdskmgaFVVNAEYplSEVTTVYAFGDVNIRKGT 353
Cdd:COG4774 150 MY-RDSDSYRDG--VDNDRWGIAPSlTWRLGDRTR------------------LTLDYEY--QDDDRTPDYGVPAVANGR 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 354 SYALYRAPYWvSDPNNLLHeagTTYNGFQPTFETDifdnlgsiglrsnvfgFNADFSLTAGSNKVDYTVGNSLNVSLGAN 433
Cdd:COG4774 207 PVDVDRSTFY-GQPDDYSD---SETDSATLRLEHD----------------FNDNWTLRNALRYSDYDRDYRNTYPTGGN 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 434 SPTQFEAGGYTFSQ----LVGNADFSRTFD----KVTFGFGTEIRREQFEARAGQEESYVGGG-------AQSFPGLQPA 498
Cdd:COG4774 267 ATGTVTRSAYRRDQdndtLSNQTDLTGKFDtggvKHTLLAGVEYSREDSDNARYSGGGTAPTVnlynpvyGAPVTGPTLG 346
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 499 NALKETRSN-VGVYTTLDYDMSEAFLIGGSIRYENY-SDFGDNI-------------SWKVSSRYKLTNDVAIRASFSTG 563
Cdd:COG4774 347 GADNDSRTDtTGLYLQDTISLTDRWSLLAGLRYDRFdTDYTDRTtgattssyddsafSPRAGLVYKPTPNLSLYASYSTS 426
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 564 FRAPAlhqiylsniqtlvsggrISNQGTFNNVDpaviglgvpkLDAEESQNIATGI--TFRSGaNFSASLDFYHIKVRNR 641
Cdd:COG4774 427 FNPGG-----------------GAPSLSNAGQA----------LDPEKSRQYEVGVkwDLLDG-RLSLTAALFRIEKTNV 478
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 642 VLfsgevgfdGDDTTTNpveevlldnditsmkFFINAVNTITKGVDVVLnyknleigTGRL--GLNLASNIANTkiDGKi 719
Cdd:COG4774 479 RT--------TDPANPG---------------VYVQTGEQRSRGVELEA--------TGELtpGWSVLAGYTYL--DAE- 524
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 720 gtpaILSANGYDifnrkEQGRILSARPNTKVLLGMNYDLNKT--TFIFNNTYFGEVtwqhATDVAKDQTFAGKVITDLGV 797
Cdd:COG4774 525 ----ITKSANAA-----NVGNRLPNVPRHSASLWTTYDLPLPglTLGGGVRYVGSR----YADAANTVKLPSYTRFDAGA 591
|
650
....*....|....*....
gi 515558517 798 AYNFTSTLSANVMVNNLLN 816
Cdd:COG4774 592 SYRLNKNLTLRLNVNNLTD 610
|
|
| PRK10064 |
PRK10064 |
catecholate siderophore receptor CirA; Provisional |
157-255 |
2.76e-13 |
|
catecholate siderophore receptor CirA; Provisional
Pssm-ID: 236646 [Multi-domain] Cd Length: 663 Bit Score: 73.77 E-value: 2.76e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 157 LRGLGPSRTLVLVNGKRKN-QSALVYINDTpgkgevgtDMKSIPFSAIERVEVLRDGASAQYGSDAIAGVVNIILKKQTN 235
Cdd:PRK10064 91 IRGLDSSYTLILIDGKRVNsRNAVFRHNDF--------DLNWIPVDAIERIEVVRGPMSSLYGSDALGGVVNIITKKIGQ 162
|
90 100
....*....|....*....|....*
gi 515558517 236 FTEVSLTSGVTSQ-----GDGFNFG 255
Cdd:PRK10064 163 KWHGTVTVDTTIQehrdrGDTYNGQ 187
|
|
| PRK13513 |
PRK13513 |
ligand-gated channel protein; |
157-720 |
3.60e-13 |
|
ligand-gated channel protein;
Pssm-ID: 184104 [Multi-domain] Cd Length: 659 Bit Score: 73.26 E-value: 3.60e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 157 LRGLGPSRTLVLVNGKRKNQSALVYINDTPGKgEVGTdmkSIPFSAIERVEVLRDGASAQYGSDAIAGVVNIILKK---- 232
Cdd:PRK13513 95 IRGMAAKYTLILVDGKRVDTRSTRPNSDGSGI-EQGW---LPPLAAIERIEVVRGPMSSLYGSDAMGGVINIITRKvqke 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 233 -------QTNFTEVSlTSGVTSQGDGFNFGADLNS--GFKIA--------DKgFVNfniSYLAQNKTNRAGK----PGKD 291
Cdd:PRK13513 171 whgslraDATLQEDS-KSGDIFQTNAYASGPLIDGllGLKVSgllshrseDK-IID---GYNEQRMRNGTATfsltPDDN 245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 292 DLFGV-AADDAQwgdwlSRNPDLGMTIGLPDSKmgafvvnaeyplsevttvyafgDVNIRKGTSYALYRAPYWvsDPNNL 370
Cdd:PRK13513 246 NEFDFeIGRYVQ-----DRNSTPGRTLALNGTN----------------------SDTQYDRNNYAITHNGYY--DFGNS 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 371 lheagTTYngfqptFETDIFDNLG-SIGLRSNVFgfnadfsltagsnkvdytvgnslnvslgaNSPTQFEAGGYTFSqlv 449
Cdd:PRK13513 297 -----TSY------IQRDETRNPSrQMKSVDTIF-----------------------------NTQTSFLLDDHTLS--- 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 450 gnadfsrtfdkvtfgFGTEIRREQFEARAGQEESYvgggaqsfpglqpANALKETRSNVGVYTTLDYDMSEAFLIGGSIR 529
Cdd:PRK13513 334 ---------------LGGQYRYEELYDKGNQLPSA-------------SDLNKLTRWSWALFAEDEWQMTNDFALTGGIR 385
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 530 YENYSDFGDNISWKVSSRYKLTNDVAIRASFSTGFRAPALHQIYlsniqtlVSGGRISNQGTfnnvDPAVIgLGVPKLDA 609
Cdd:PRK13513 386 MDQDQNYGTHWTPRLYGVWHLADQWTLKGGVSTGYRSPDLRQAT-------DNWGQLTGGGG----LPALI-LGNSDLKP 453
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 610 EESQNIATGITFRSGANFSASLDFYHIKVRNRVLfsgEVGFDGDDTTTNPVEEVLLDNDITSMKFFINAVNtiTKGVDVV 689
Cdd:PRK13513 454 EKSISQEIGILWDNQENLNASVTLFNTDFKDKIT---EVRNCDTTNTDGQCVFNGINYDFISDRINVDKAN--MRGVEAT 528
|
570 580 590
....*....|....*....|....*....|.
gi 515558517 690 LNYKNLEigtgrlGLNLASNIANTKIDGKIG 720
Cdd:PRK13513 529 FNWDINQ------AWSLATNYTFTQSEQKSG 553
|
|
| btuB |
PRK10641 |
TonB-dependent vitamin B12 receptor BtuB; |
157-249 |
5.22e-11 |
|
TonB-dependent vitamin B12 receptor BtuB;
Pssm-ID: 236730 [Multi-domain] Cd Length: 614 Bit Score: 66.17 E-value: 5.22e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 157 LRGLGPSRTLVLVNGKRKNQSALVYindtpgkgevGTDMKSIPFSAIERVEVLRDGASAQYGSDAIAGVVNIILKKQTNF 236
Cdd:PRK10641 88 IRGTNSSHVLVLIDGVRLNQAGISG----------SADLSQIPISLVQRIEYIRGPRSAVYGSDAIGGVVNIITTRDKPG 157
|
90
....*....|...
gi 515558517 237 TEvsLTSGVTSQG 249
Cdd:PRK10641 158 TT--LSAGWGSNG 168
|
|
| FhuE |
COG4773 |
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ... |
197-816 |
1.13e-09 |
|
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];
Pssm-ID: 443805 [Multi-domain] Cd Length: 692 Bit Score: 62.22 E-value: 1.13e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 197 SIPFSAIERVEVLRDGASAQYGSDAIAGVVNIILKK--QTNFTEVSLTSGvtsQGDGFNFGADLNSgfKIADKGFVNFNI 274
Cdd:COG4773 132 QPDTANLERVEVLKGPAGLLYGAGSPGGLVNLVTKRptAEPQGEVSLSAG---SWDTYRATADVGG--PLNEDGTLRYRL 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 275 SYLAQNK-TNRAGkpGKDDLFGVAAD-DAQWGDWLSrnpdlgmtiglpdskmgaFVVNAEYPLSEVTTVYAF-----GDV 347
Cdd:COG4773 207 NAAYEDGdSFRDG--VDNRRTLIAPSlDWDLTDDTT------------------LTLGAEYQDDDSTGDRGFlpldgTLL 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 348 NIRKGTSYAlyrAPYwvsDPNNllheagTTYNGFQPTFETDifdnlgsiglrsnvfgFNADFSLTAGSNKVDYTV-GNSL 426
Cdd:COG4773 267 DLPRSTNLG---EPW---DYYD------TETTTLFAELEHR----------------FNDDWSLRANARYSDSDRdGRSA 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 427 NVSLGANSPT-----QFEAGGYTFSQLVGNADFSRTFD------KVTFGFGTEIRREQFEARAGQEESYVGGGAQSFPGL 495
Cdd:COG4773 319 YAYGAPDAATgtltrYASARDGDSRSDSLDANLNGKFEtgglehTLLVGADYSRYDSDSDSATAGTINIYNPVYGNLPEP 398
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 496 QPANALKETRSN-VGVYTTLDYDMSEAFLIGGSIRYENYSDFGDNISWKVSSR-------------YKLTNDVAIRASFS 561
Cdd:COG4773 399 DFDASDTDTTTRqTGLYAQDQISLTDRLSLLLGGRYDWYETDSTNRLGGSTTSyddsaftpraglvYDLTPGLSLYASYS 478
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 562 TGFRApalhqiylsniqtlvsGGRISNQGTFnnvdpaviglgvpkLDAEESQNIATGI---TFRSGANFSASLdfYHIKV 638
Cdd:COG4773 479 ESFEP----------------QSGADNNGNP--------------LDPETGKQYEAGVkgeLFDGRLNATLAV--FDITQ 526
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 639 RNRVLFsgevgfDGDDTTtnpveevlldnditsmkFFINAVNTITKGVDvvlnyknLEIgTGRL--GLNLASNIANTKID 716
Cdd:COG4773 527 KNVATT------DPDNPN-----------------FYVQVGEVRSRGVE-------LEL-SGELtpGLNLIAGYTYTDAK 575
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 717 gkigtpailsangYDIFNRKEQGRILSARPNTKVLLGMNYDLnkTTFIFNNTYFG-EVTWQ--HATDVAKDQTFAGKVIT 793
Cdd:COG4773 576 -------------ITKDADALEGKRLTNVPRHTASLWTTYRF--PSGALKGLGLGgGVRYVgeRYGDAANTFTLPSYTLV 640
|
650 660
....*....|....*....|...
gi 515558517 794 DLGVAYNFTSTLSANVMVNNLLN 816
Cdd:COG4773 641 DAGARYDLGKNWTLQLNVNNLFD 663
|
|
| TonB-siderophor |
TIGR01783 |
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ... |
116-816 |
7.64e-07 |
|
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273805 [Multi-domain] Cd Length: 651 Bit Score: 52.80 E-value: 7.64e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 116 AEDLKSSGQVTFDKMLAYKIPSFNSSSQAISDatahFDPADLRGLGPSrtlVLVNGkrknqsalVYINDTPGKGEVGTDm 195
Cdd:TIGR01783 11 RQELEDQQAGSLSEALQRVPGVVVGGSGGTTQ----FGNITIRGFGLE---VDIDN--------VYLDGVPLLSRGNLA- 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 196 kSIPFSAIERVEVLRDGASAQYGSDAIAGVVNIILKK--QTNFTEVSLTSGVtsqGDGFNFGADLNSgfKIADKGFVNFN 273
Cdd:TIGR01783 75 -IVDPAMVERVEVLRGPASLLYGGSAPGGVINIVTKRpqDEPKGSVTFGAGT---RSGYRTAFDLGG--PLGADGTFRGR 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 274 ISYLAQnktnragkpgkddlfgvaaDDAQWGDWLSRNPDLGMT-IGLPDSKMGAFVVNAEYPLSEVTTVYafGDVNIRKG 352
Cdd:TIGR01783 149 LNGARQ-------------------DGDSFYDGAGEETRLGATaTDWQLDDRTLLRLGAYYQKERDRGGY--GGLPASGG 207
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 353 TSYALYRAPYWVSDPNN-------LLHEAGTTYNGFQPTF---ETDIFDNLGSIGLRSNVFGFNADFSLTAGSNKVDYTV 422
Cdd:TIGR01783 208 TSGRDLSSDRYLGTSSNrnyddreYLSYGLSLEYQFNDVWtgkQNLRYSYFDTDSNQVQASGYSSDGGLFGRSLTVVNVK 287
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 423 GNSLNVSLGANSPtqFEAGGYTFSQLVGNADFSRTFDK--VTFGFGTEIRREqfearagqeesyvggGAQSFPGLQPANA 500
Cdd:TIGR01783 288 QDRVQIDAGLDGE--FETGPIEHDLLLGVSYGQRTTNRfnNTGYPSDNIYSL---------------TATSSARTDIGDS 350
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 501 LKE------TRSNVGVYTTLDYDMSEAFLIGG----SIRYEN--------YSDFGDNISWKVSSRYKLTNDVAIRASFST 562
Cdd:TIGR01783 351 PKDralsstTKALNGVALQRILLADKWTLTLGgrydSVDVKSnngvagstGKRDDSQFTPSLGVAYKPTDDWSLYASYAE 430
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 563 GFRAPALHQIylsniqtlvsgGRISNQGtfnnvdpaviglgvpKLDAEESQNIATGITFRSGANFSASLDFYHIKVRNrv 642
Cdd:TIGR01783 431 SFKPGGYYPK-----------GAGNSGD---------------ILEPEKGKNYELGVRYDLGDSLLATAALFRITKDN-- 482
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 643 lfsgevgfdgddtttnpveevLLDNDitsmkffiNAVNTITKGVDVVLNYkNLEIGT-GRL--GLNLASNIANTKidgki 719
Cdd:TIGR01783 483 ---------------------QLVQD--------PVNGTFSVNAGKTRNR-GVELEArGYLtpGLSLSAGYTYTD----- 527
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 720 gtpailsANGYDIFNRKEQGRILSARPNTKVLLGMNYDLNktTFIFNNTYFGEVTWQHATDVAKDQTF--AGKVITDLGV 797
Cdd:TIGR01783 528 -------AEFTEDTNGDTQGNTVPFVPKHTASLWASYAPP--VGDNGLTLGGGVQYTGKAYVDGGNTGkvPSYTVVDLSV 598
|
730 740
....*....|....*....|.
gi 515558517 798 AYNFTS--TLSANVMVNNLLN 816
Cdd:TIGR01783 599 RYDLTKkkNLTLALNVNNLFD 619
|
|
| CarboxypepD_reg |
pfam13620 |
Carboxypeptidase regulatory-like domain; |
12-66 |
2.07e-05 |
|
Carboxypeptidase regulatory-like domain;
Pssm-ID: 433354 [Multi-domain] Cd Length: 81 Bit Score: 43.42 E-value: 2.07e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 515558517 12 TIKGIVTDENGQPLPYSNV----IEKETSNGVTTDGNGNFEIK-VKGFPVTLIAKYVGFQ 66
Cdd:pfam13620 1 TISGTVTDPSGAPVPGATVtvtnTDTGTVRTTTTDADGRYRFPgLPPGTYTVTVSAPGFK 60
|
|
| PRK14050 |
PRK14050 |
TonB-dependent siderophore receptor; |
199-275 |
2.79e-04 |
|
TonB-dependent siderophore receptor;
Pssm-ID: 237595 [Multi-domain] Cd Length: 728 Bit Score: 44.79 E-value: 2.79e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 515558517 199 PFsAIERVEVLRDGASAQYGSDAIAGVVNIILKKQTNFTEVSLTSGVTSQGDGFnFGADLNSgfKIADKGFVNFNIS 275
Cdd:PRK14050 155 PF-MLERVEVLKGPASVLYGGSNPGGIVNMVSKRPLDEPLYYTEIGINSYGNAF-TGFDVGD--KLSDDGTVRYRVT 227
|
|
| |
