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Conserved domains on  [gi|515240656|ref|WP_016822223|]
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MULTISPECIES: glycerol-3-phosphate 1-O-acyltransferase PlsY [Paenibacillus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK00220 super family cl42189
glycerol-3-phosphate 1-O-acyltransferase PlsY;
1-198 7.40e-86

glycerol-3-phosphate 1-O-acyltransferase PlsY;


The actual alignment was detected with superfamily member PRK14405:

Pssm-ID: 478012  Cd Length: 202  Bit Score: 251.95  E-value: 7.40e-86
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515240656   1 MILQIVAIVLSYLLGSVSFSLLYGK-LKGIDIRQHGSGNAGATNTLRVLGKGPAILVLLLDVLKGVIAVLIGHWLGGE-S 78
Cdd:PRK14405   1 MILLLLAVVLSYLLGSVSFSYLIAKkIKGIDIRQHGSGNAGATNTLRVLGKGPAILVLLLDVVKGIAAVWIGRLLTGDgA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515240656  79 SWLPGLCGIAAIAGHNWPVYFHFRGGKGIATAIGVLASLALLPALYAGIIAILAIVITRYVSLGSLIFVILTPWILLVLG 158
Cdd:PRK14405  81 AWFPALAGLAAIIGHNWPIYFGFRGGKGIATTIGVVATLVFLPALIAGVIAIISIVITRYVSLGSLLFVTLTPVLLYIFD 160

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|
gi 515240656 159 FAWPLFWTALIICLFAVWRHRTNIVKLARGNENKLGSKGG 198
Cdd:PRK14405 161 YPIPYIWLSLIIAIFAFWRHRTNIVRLLSGTENKLGKKKG 200
 
Name Accession Description Interval E-value
PRK14405 PRK14405
membrane protein; Provisional
 1-198 7.40e-86

membrane protein; Provisional


Pssm-ID: 237706  Cd Length: 202  Bit Score: 251.95  E-value: 7.40e-86
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515240656   1 MILQIVAIVLSYLLGSVSFSLLYGK-LKGIDIRQHGSGNAGATNTLRVLGKGPAILVLLLDVLKGVIAVLIGHWLGGE-S 78
Cdd:PRK14405   1 MILLLLAVVLSYLLGSVSFSYLIAKkIKGIDIRQHGSGNAGATNTLRVLGKGPAILVLLLDVVKGIAAVWIGRLLTGDgA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515240656  79 SWLPGLCGIAAIAGHNWPVYFHFRGGKGIATAIGVLASLALLPALYAGIIAILAIVITRYVSLGSLIFVILTPWILLVLG 158
Cdd:PRK14405  81 AWFPALAGLAAIIGHNWPIYFGFRGGKGIATTIGVVATLVFLPALIAGVIAIISIVITRYVSLGSLLFVTLTPVLLYIFD 160

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|
gi 515240656 159 FAWPLFWTALIICLFAVWRHRTNIVKLARGNENKLGSKGG 198
Cdd:PRK14405 161 YPIPYIWLSLIIAIFAFWRHRTNIVRLLSGTENKLGKKKG 200
PlsY COG0344
Phospholipid biosynthesis protein PlsY, probable glycerol-3-phosphate acyltransferase [Lipid ...
 1-194 6.81e-69

Phospholipid biosynthesis protein PlsY, probable glycerol-3-phosphate acyltransferase [Lipid transport and metabolism];


Pssm-ID: 440113 [Multi-domain]  Cd Length: 194  Bit Score: 208.40  E-value: 6.81e-69
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515240656   1 MILQIVAIVLSYLLGSVSFSLLYGKL-KGIDIRQHGSGNAGATNTLRVLGKGPAILVLLLDVLKGVIAVLIGHWLGGeSS 79
Cdd:COG0344    1 MMLLLLLLLLAYLLGSIPFGYLVGKLfGGIDIREHGSGNIGATNVLRVLGKKAGLLVLLLDALKGALAVLLARLLGG-GP 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515240656  80 WLPGLCGIAAIAGHNWPVYFHFRGGKGIATAIGVLASLALLPALYAGIIAILAIVITRYVSLGSLIFVILTPWILLVLGF 159
Cdd:COG0344   80 LLLLLAGLAAVLGHNFPVFLGFKGGKGVATALGVLLALSPLVGLIALAVWLLVLLLTRYVSLGSLVAALAAPILALLLGG 159

                        170       180       190
                 ....*....|....*....|....*....|....*
gi 515240656 160 AWPLFWTALIICLFAVWRHRTNIVKLARGNENKLG 194
Cdd:COG0344  160 PLALLLLALLLALLVIYRHRSNIKRLLAGTESKIG 194
G3P_acyltransf pfam02660
Glycerol-3-phosphate acyltransferase; This family of enzymes catalyzes the transfer of an acyl ...
 10-185 2.57e-59

Glycerol-3-phosphate acyltransferase; This family of enzymes catalyzes the transfer of an acyl group from acyl-ACP to glycerol-3-phosphate to form lysophosphatidic acid.


Pssm-ID: 460641 [Multi-domain]  Cd Length: 174  Bit Score: 183.46  E-value: 2.57e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515240656   10 LSYLLGSVSFSLLYGKL-KGIDIRQHGSGNAGATNTLRVLGKGPAILVLLLDVLKGVIAVLIGHWLGGESSWLPgLCGIA 88
Cdd:pfam02660   1 IAYLLGSIPFGYLIGKLlKGIDIREYGSGNPGATNVLRVLGKKAGILVLLLDALKGVLAVLLARLLFGGLLLEL-LAGLA 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515240656   89 AIAGHNWPVYFHFRGGKGIATAIGVLASLALLPALYAGIIAILAIVITRYVSLGSLIFVILTPwiLLVLGFAWPLFWTAL 168
Cdd:pfam02660  80 AVLGHNFPVFLGFKGGKGVATTLGVLLALSPWDALIALAVFLLVLALTRYVSLGSLVAALLLP--ILLLLFGLPLVIFAL 157

                         170
                  ....*....|....*..
gi 515240656  169 IICLFAVWRHRTNIVKL 185
Cdd:pfam02660 158 LLALLVIWRHRENIKRL 174
TIGR00023 TIGR00023
acyl-phosphate glycerol 3-phosphate acyltransferase; This model represents the full length of ...
 2-196 5.69e-44

acyl-phosphate glycerol 3-phosphate acyltransferase; This model represents the full length of acylphosphate:glycerol 3-phosphate acyltransferase, and integral membrane protein about 200 amino acids in length, called PlsY in Streptococcus pneumoniae, YneS in Bacillus subtilis, and YgiH in E. coli. It is found in a single copy in a large number of bacteria, including the Mycoplasmas but not Mycobacteria or spirochetes, for example. Its partner is PlsX (see TIGR00182), and the pair can replace PlsB for synthesizing 1-acylglycerol-3-phosphate. [Fatty acid and phospholipid metabolism, Biosynthesis]


Pssm-ID: 272860 [Multi-domain]  Cd Length: 196  Bit Score: 145.19  E-value: 5.69e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515240656    2 ILQIVAIVLSYLLGSVSFSLLYGKL-KGIDIRQHGSGNAGATNTLRVLGKGPAILVLLLDVLKGVIAVLIGhWLGGESSW 80
Cdd:TIGR00023   3 LLIVFLLLIGYLIGSIPFAYLVGKIlKGIDIREHGSGNPGATNVLRTLGVKAALLVLIFDILKGMLAVALS-FLLGLFDF 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515240656   81 LPGLCGIAAIAGHNWPVYFHFRGGKGIATAIGVLASLALLPALYAGIIAILAIVITRYVSLGSLIFVILTPWILLVLGFA 160
Cdd:TIGR00023  82 LPGLVAIAAVLGHIFPIFFKFKGGKGVATSGGSLLPISPWLFLIMLATWLFVTLVTKYVSLSSIVTAIVLPFYVLWFHLP 161

                         170       180       190
                  ....*....|....*....|....*....|....*.
gi 515240656  161 WPLFWTALIIClFAVWRHRTNIVKLARGNENKLGSK 196
Cdd:TIGR00023 162 YLYIPVTLLLI-FVIYRHRANIQRLLNGTEPKVWQK 196
 
Name Accession Description Interval E-value
PRK14405 PRK14405
membrane protein; Provisional
 1-198 7.40e-86

membrane protein; Provisional


Pssm-ID: 237706  Cd Length: 202  Bit Score: 251.95  E-value: 7.40e-86
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515240656   1 MILQIVAIVLSYLLGSVSFSLLYGK-LKGIDIRQHGSGNAGATNTLRVLGKGPAILVLLLDVLKGVIAVLIGHWLGGE-S 78
Cdd:PRK14405   1 MILLLLAVVLSYLLGSVSFSYLIAKkIKGIDIRQHGSGNAGATNTLRVLGKGPAILVLLLDVVKGIAAVWIGRLLTGDgA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515240656  79 SWLPGLCGIAAIAGHNWPVYFHFRGGKGIATAIGVLASLALLPALYAGIIAILAIVITRYVSLGSLIFVILTPWILLVLG 158
Cdd:PRK14405  81 AWFPALAGLAAIIGHNWPIYFGFRGGKGIATTIGVVATLVFLPALIAGVIAIISIVITRYVSLGSLLFVTLTPVLLYIFD 160

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|
gi 515240656 159 FAWPLFWTALIICLFAVWRHRTNIVKLARGNENKLGSKGG 198
Cdd:PRK14405 161 YPIPYIWLSLIIAIFAFWRHRTNIVRLLSGTENKLGKKKG 200
PlsY COG0344
Phospholipid biosynthesis protein PlsY, probable glycerol-3-phosphate acyltransferase [Lipid ...
 1-194 6.81e-69

Phospholipid biosynthesis protein PlsY, probable glycerol-3-phosphate acyltransferase [Lipid transport and metabolism];


Pssm-ID: 440113 [Multi-domain]  Cd Length: 194  Bit Score: 208.40  E-value: 6.81e-69
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515240656   1 MILQIVAIVLSYLLGSVSFSLLYGKL-KGIDIRQHGSGNAGATNTLRVLGKGPAILVLLLDVLKGVIAVLIGHWLGGeSS 79
Cdd:COG0344    1 MMLLLLLLLLAYLLGSIPFGYLVGKLfGGIDIREHGSGNIGATNVLRVLGKKAGLLVLLLDALKGALAVLLARLLGG-GP 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515240656  80 WLPGLCGIAAIAGHNWPVYFHFRGGKGIATAIGVLASLALLPALYAGIIAILAIVITRYVSLGSLIFVILTPWILLVLGF 159
Cdd:COG0344   80 LLLLLAGLAAVLGHNFPVFLGFKGGKGVATALGVLLALSPLVGLIALAVWLLVLLLTRYVSLGSLVAALAAPILALLLGG 159

                        170       180       190
                 ....*....|....*....|....*....|....*
gi 515240656 160 AWPLFWTALIICLFAVWRHRTNIVKLARGNENKLG 194
Cdd:COG0344  160 PLALLLLALLLALLVIYRHRSNIKRLLAGTESKIG 194
G3P_acyltransf pfam02660
Glycerol-3-phosphate acyltransferase; This family of enzymes catalyzes the transfer of an acyl ...
 10-185 2.57e-59

Glycerol-3-phosphate acyltransferase; This family of enzymes catalyzes the transfer of an acyl group from acyl-ACP to glycerol-3-phosphate to form lysophosphatidic acid.


Pssm-ID: 460641 [Multi-domain]  Cd Length: 174  Bit Score: 183.46  E-value: 2.57e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515240656   10 LSYLLGSVSFSLLYGKL-KGIDIRQHGSGNAGATNTLRVLGKGPAILVLLLDVLKGVIAVLIGHWLGGESSWLPgLCGIA 88
Cdd:pfam02660   1 IAYLLGSIPFGYLIGKLlKGIDIREYGSGNPGATNVLRVLGKKAGILVLLLDALKGVLAVLLARLLFGGLLLEL-LAGLA 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515240656   89 AIAGHNWPVYFHFRGGKGIATAIGVLASLALLPALYAGIIAILAIVITRYVSLGSLIFVILTPwiLLVLGFAWPLFWTAL 168
Cdd:pfam02660  80 AVLGHNFPVFLGFKGGKGVATTLGVLLALSPWDALIALAVFLLVLALTRYVSLGSLVAALLLP--ILLLLFGLPLVIFAL 157

                         170
                  ....*....|....*..
gi 515240656  169 IICLFAVWRHRTNIVKL 185
Cdd:pfam02660 158 LLALLVIWRHRENIKRL 174
PRK00220 PRK00220
glycerol-3-phosphate 1-O-acyltransferase PlsY;
1-197 5.44e-56

glycerol-3-phosphate 1-O-acyltransferase PlsY;


Pssm-ID: 234691 [Multi-domain]  Cd Length: 198  Bit Score: 175.74  E-value: 5.44e-56
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515240656   1 MILQIVAIVLSYLLGSVSFSLLYGKL-KGIDIRQHGSGNAGATNTLRVLGKGPAILVLLLDVLKGVIAVLIGHWLGGESS 79
Cdd:PRK00220   2 SMIALLLILLAYLLGSIPFALLVGKLfGLPDPREHGSGNPGATNVLRIGGKKAAIATLLGDALKGTLAVLLAYLFGLDPI 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515240656  80 WlPGLCGIAAIAGHNWPVYFHFRGGKGIATAIGVLASLALLPALYAGIIAILAIVITRYVSLGSLIFVILTPWILLVLGF 159
Cdd:PRK00220  82 S-LGLIALAAVLGHIFPVFFKFKGGKGVATAAGVLLGIGPLLALILAATWLLVALLTRYSSLAALVAALIAPIYVWWFPP 160

                        170       180       190
                 ....*....|....*....|....*....|....*...
gi 515240656 160 AWPLFWTALIICLFAVWRHRTNIVKLARGNENKLGSKG 197
Cdd:PRK00220 161 DWQFTIPVALLSVLIIYRHRDNIQRLLAGTESKIGWKK 198
PRK14419 PRK14419
membrane protein; Provisional
 1-198 9.00e-51

membrane protein; Provisional


Pssm-ID: 237709 [Multi-domain]  Cd Length: 199  Bit Score: 162.84  E-value: 9.00e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515240656   1 MILQIVAIVLSYLLGSVSFSLLYGK-LKGIDIRQHGSGNAGATNTLRVLGKGPAILVLLLDVLKGVIAVLIGHWLGgESS 79
Cdd:PRK14419   1 LLMALLIILLAYLLGSFPSGYLAGRwLKGIDLREIGSGSTGATNVLRNVGKGPALFVFIIDVGKGVLAVLLAYALG-LQP 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515240656  80 WLPGLCGIAAIAGHNWPVYFHFRGGKGIATAIGVLASLALLPALYAGIIAILAIVITRYVSLGSLIFVILTPWILLVLGF 159
Cdd:PRK14419  80 WLQVLAGLAALLGHIWPVWLGFKGGKAVATGLGMLLALSWPVGLASLGIFLIVLALSRIVSLSSISAAIALPLLMFLLNI 159

                        170       180       190
                 ....*....|....*....|....*....|....*....
gi 515240656 160 AWPLFWTALIICLFAVWRHRTNIVKLARGNENKLGSKGG 198
Cdd:PRK14419 160 PLPYILFSLAAGLLVIWRHRSNIERLLAGTEPKIGQKNK 198
TIGR00023 TIGR00023
acyl-phosphate glycerol 3-phosphate acyltransferase; This model represents the full length of ...
 2-196 5.69e-44

acyl-phosphate glycerol 3-phosphate acyltransferase; This model represents the full length of acylphosphate:glycerol 3-phosphate acyltransferase, and integral membrane protein about 200 amino acids in length, called PlsY in Streptococcus pneumoniae, YneS in Bacillus subtilis, and YgiH in E. coli. It is found in a single copy in a large number of bacteria, including the Mycoplasmas but not Mycobacteria or spirochetes, for example. Its partner is PlsX (see TIGR00182), and the pair can replace PlsB for synthesizing 1-acylglycerol-3-phosphate. [Fatty acid and phospholipid metabolism, Biosynthesis]


Pssm-ID: 272860 [Multi-domain]  Cd Length: 196  Bit Score: 145.19  E-value: 5.69e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515240656    2 ILQIVAIVLSYLLGSVSFSLLYGKL-KGIDIRQHGSGNAGATNTLRVLGKGPAILVLLLDVLKGVIAVLIGhWLGGESSW 80
Cdd:TIGR00023   3 LLIVFLLLIGYLIGSIPFAYLVGKIlKGIDIREHGSGNPGATNVLRTLGVKAALLVLIFDILKGMLAVALS-FLLGLFDF 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515240656   81 LPGLCGIAAIAGHNWPVYFHFRGGKGIATAIGVLASLALLPALYAGIIAILAIVITRYVSLGSLIFVILTPWILLVLGFA 160
Cdd:TIGR00023  82 LPGLVAIAAVLGHIFPIFFKFKGGKGVATSGGSLLPISPWLFLIMLATWLFVTLVTKYVSLSSIVTAIVLPFYVLWFHLP 161

                         170       180       190
                  ....*....|....*....|....*....|....*.
gi 515240656  161 WPLFWTALIIClFAVWRHRTNIVKLARGNENKLGSK 196
Cdd:TIGR00023 162 YLYIPVTLLLI-FVIYRHRANIQRLLNGTEPKVWQK 196
PRK14397 PRK14397
membrane protein; Provisional
 2-190 5.46e-36

membrane protein; Provisional


Pssm-ID: 237700  Cd Length: 222  Bit Score: 125.74  E-value: 5.46e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515240656   2 ILQIVAIVLSYLLGSVSFSLLYGKL-KGIDIRQHGSGNAGATNTLRVLGKGPAILVLLLDVLKGVIAVLIGHWLGgESSW 80
Cdd:PRK14397   1 MGSLLWIATAYVMGSIPFGLVFARTfCGIDPRTGGSRNVGATNVARLCGTKWGVLTLVCDVLKGAVPVAVAMSIS-DSPV 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515240656  81 LPGLCGIAAIAGHNWPVYFHFRGGKGIATAIGVLASLALLPALYAGIIAILAIVITRYVSLGSLIFVILTPWILLVLGfA 160
Cdd:PRK14397  80 FHSLTALAALLGHLYSCFLGFRGGKAVATTIGVFIPLAFWQLLLSGILCLLVIWRSGFVSLGSLTLVTALPVMLLITG-K 158

                        170       180       190
                 ....*....|....*....|....*....|
gi 515240656 161 WPLFWTALIICLFAVWRHRTNIVKLARGNE 190
Cdd:PRK14397 159 WKLIPLALVVMALVYWSHRENIGRLARGEE 188
PRK14417 PRK14417
membrane protein; Provisional
 1-113 4.67e-24

membrane protein; Provisional


Pssm-ID: 184668  Cd Length: 232  Bit Score: 94.87  E-value: 4.67e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515240656   1 MILQIVAIVLSYLLGSVSFSLLYGK-LKGIDIRQHGSGNAGATNTLRVLGKGPAILVLLLDVLKGVIAVLIGHWLGGESs 79
Cdd:PRK14417   2 SPVFLIMIPAGYLVGAIPMAYLLSRwRRGIDIRRYGSGNVGASNVIKTAGKRLGLAVFVFDVSKGALMILLAGWLGLEL- 80

                         90       100       110
                 ....*....|....*....|....*....|....
gi 515240656  80 WLPGLCGIAAIAGHNWPVYFHFRGGKGIATAIGV 113
Cdd:PRK14417  81 WQQIVVGLATIAGHNWPVFLRFNGGRGIATSLGV 114
PRK14414 PRK14414
glycerol-3-phosphate acyltransferase;
1-153 2.90e-22

glycerol-3-phosphate acyltransferase;


Pssm-ID: 184665  Cd Length: 210  Bit Score: 89.56  E-value: 2.90e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515240656   1 MILQIVAIVLSYLLGSVSFSLLYGK-LKGIDIRQHGSGNAGATNTLRVLGKGPAILVLLLDVLKGVIAVLIGHWLGgESS 79
Cdd:PRK14414   4 LIMVIIALIAAYFIGSTPAPYLAGRiFKGIDIRTVGSKNMGSMNVFYNVGFWPGILVLAVDIGKGALAMAVANWLG-EGL 82

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 515240656  80 WLPGLCGIAAIAGHNWPVYFHFRGGKGIATAIGVLASLALLPALYAGIIAILAIVITRYVSLG---SLIFVILTPWI 153
Cdd:PRK14414  83 GIQMLCALMAIAGHNYPVWLKFKGGKGGATAIGILAYMMPEGIPIYIACFLILMAITRFPTLSygiSFISFILVAWL 159
PRK14401 PRK14401
membrane protein; Provisional
 5-112 3.38e-19

membrane protein; Provisional


Pssm-ID: 184658  Cd Length: 187  Bit Score: 80.94  E-value: 3.38e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515240656   5 IVAIVLSYLLGSVSFSLLYGKLKGIDIRqhGSGNAGATNTLRVLGKGPAILVLLLDVLKGVIAVLIGHWLGGESSWLPGL 84
Cdd:PRK14401   3 LLVAVLAYLLGSLVAGVLYSRARGEDIR--ERDLPGGSGTYRQFGPGAALLVAAADILKGVAAALLARWLAPPATWLAGA 80

                         90       100
                 ....*....|....*....|....*...
gi 515240656  85 cgiAAIAGHNWPVYFHFRGGKGIATAIG 112
Cdd:PRK14401  81 ---AVVAGHCWPVFFRFRGGGGIAPTLG 105
PRK14416 PRK14416
membrane protein; Provisional
 13-153 4.38e-19

membrane protein; Provisional


Pssm-ID: 184667  Cd Length: 200  Bit Score: 81.07  E-value: 4.38e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515240656  13 LLGSV-SFSLLYGKLKGIDIRQHGSGNAGATNTLRVLGKGPAILVLLLDVLKGVIAVLIGHWLGGESSWLPGLCGIAAIA 91
Cdd:PRK14416   1 LLGSIpSAYLVTRRLTGRDIRQMGGGNVGGLNTFREVGTGAGIAVVFIDLVKGALAVSVSYYLLTQNAQWVILTGFAAVI 80

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 515240656  92 GHNWPVYFHFRGGKGIATAIGVLASLALLPALYAGIIAILAIV-----ITRYVSLGSLIFVILTPWI 153
Cdd:PRK14416  81 GHNWSVWLDFKGGKGLGPAFGAMLFLLPVYGLPQQLGILALLVfiplaLTRNIALATGIALFSLPFL 147
PRK14399 PRK14399
membrane protein; Provisional
 5-161 4.33e-18

membrane protein; Provisional


Pssm-ID: 237702  Cd Length: 258  Bit Score: 79.53  E-value: 4.33e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515240656   5 IVAIVLSYLLGSVSFSL-LYGKLKGIDIRQHGSGNAGATNTLRVLGKGPAILVLLLDVLKGVIAV-------LIGHWLGG 76
Cdd:PRK14399  12 ILASVFGYFLGSISWSIiIVKKVGNIDIRTVGSGNPGATNTVRILGKKWGLVVAFLDALKVLFTAifaillsMIPNELFS 91

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515240656  77 ESSWLpgLCGIAAIAGHNWPVYFHFRGGKGIATAIGVLASLALLPALYAGIIAILAIVITRYVSLGSLI------FVILT 150
Cdd:PRK14399  92 QTSYF--IPCIFALIGHCWPIYYKFKGGKAVSCFLGLLFVVNYLYLIIFLIVWFISVAISRKVSVASIFsaatilLIMWI 169

                        170
                 ....*....|.
gi 515240656 151 PWILLVLGFAW 161
Cdd:PRK14399 170 PYLYGVSYFIW 180
PRK14411 PRK14411
membrane protein; Provisional
 4-149 4.05e-10

membrane protein; Provisional


Pssm-ID: 184663  Cd Length: 204  Bit Score: 56.71  E-value: 4.05e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515240656   4 QIVAIVLSYLLGSVSFSLLYGKL-KGIDIRQHGSGNAGATNTLRVLGKGPAILVLLLDVLKGVIAVLIGHWLGgESSWLP 82
Cdd:PRK14411   3 RFWATLIGYVFGNFLTAMIVGKIfLHKDPTKYGSGNPGTANMGAVFGKKWGILTCIGDLLKTLIALFIVYFIY-HGHLNI 81

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 515240656  83 GLCGIAAIAGHNWPVYFHFRGGKGIATAIGVLASLALLPALYAGIIAILAIVITRYVSLGSLIFVIL 149
Cdd:PRK14411  82 AYAGLGVVLGHCFPIWNHFKGGKGVAVTAQVAVFYDWRAGLITLLIALVLTAIMQNLTIPPLVFMLL 148
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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