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Conserved domains on  [gi|510997058|ref|WP_016264910|]
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phospho-N-acetylmuramoyl-pentapeptide-transferase [Latilactobacillus sakei]

Protein Classification

phospho-N-acetylmuramoyl-pentapeptide-transferase( domain architecture ID 10160594)

phospho-N-acetylmuramoyl-pentapeptide-transferase catalyzes the initial step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; it transfers peptidoglycan precursor phospho-MurNAc-pentapeptide from UDP-MurNAc-pentapeptide onto the lipid carrier undecaprenyl phosphate, to produce undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide, known as lipid I

EC:  2.7.8.13
Gene Ontology:  GO:0046872|GO:0008963|GO:0009252
PubMed:  7734839|11024259
SCOP:  3002333

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
GT_MraY cd06852
Phospho-N-acetylmuramoyl-pentapeptide-transferase (mraY) is an enzyme responsible for the ...
41-319 2.74e-112

Phospho-N-acetylmuramoyl-pentapeptide-transferase (mraY) is an enzyme responsible for the formation of the first lipid intermediate in the synthesis of bacterial cell wall peptidoglycan. It catalyzes the formation of undecaprenyl-pyrophosphoryl-N-acetylmuramoyl-pentapeptide from UDP-MurNAc-pentapeptide and undecaprenyl-phosphate. It is an integral membrane protein with possibly ten transmembrane domains.


:

Pssm-ID: 133462  Cd Length: 280  Bit Score: 326.75  E-value: 2.74e-112
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 510997058  41 GPKWHAKKNGTPTMGGLVFIVAAVISSIwvaIWLQQLTNSLWIALFILVLYGLLGFSDDFIKVFKKQNLGLRAWQKLAGQ 120
Cdd:cd06852    1 GPKSHLKKAGTPTMGGILFILAILISTL---LWADLDSPEVLLLLLLTLGFGLIGFLDDYLKVVKKRNLGLSARQKLLLQ 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 510997058 121 ILGGAVFLAVYFHEGFSHALNIPLI---GTISSSWFFSLFIIVWLVGFSNAVNLADGIDGLVAGLAIVSFATYTIIAF-R 196
Cdd:cd06852   78 FLIAIVFALLLYYFNGSGTLITLPFfknGLIDLGILYIPFAIFVIVGSSNAVNLTDGLDGLAAGVSIIVALALAIIAYlA 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 510997058 197 QNQIDVAIFGLTIIGGLIGFLIFNHKPAQIFMGDVGSLALGGALAAMSILLHREFSLLLIGLVYVIETASVMLQVASFKL 276
Cdd:cd06852  158 GNAVFLAVFCAALVGACLGFLWFNAYPAKVFMGDTGSLALGGALAALAILTKQELLLLIIGGVFVIEALSVILQVGSFKL 237
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|...
gi 510997058 277 FHKRIFKMSPIHHHFEMSGWSEWRIDISFWVFSIICSTIYLLI 319
Cdd:cd06852  238 TGKRIFKMAPLHHHFELKGWSETKVVVRFWIISLILALIGLLL 280
 
Name Accession Description Interval E-value
GT_MraY cd06852
Phospho-N-acetylmuramoyl-pentapeptide-transferase (mraY) is an enzyme responsible for the ...
41-319 2.74e-112

Phospho-N-acetylmuramoyl-pentapeptide-transferase (mraY) is an enzyme responsible for the formation of the first lipid intermediate in the synthesis of bacterial cell wall peptidoglycan. It catalyzes the formation of undecaprenyl-pyrophosphoryl-N-acetylmuramoyl-pentapeptide from UDP-MurNAc-pentapeptide and undecaprenyl-phosphate. It is an integral membrane protein with possibly ten transmembrane domains.


Pssm-ID: 133462  Cd Length: 280  Bit Score: 326.75  E-value: 2.74e-112
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 510997058  41 GPKWHAKKNGTPTMGGLVFIVAAVISSIwvaIWLQQLTNSLWIALFILVLYGLLGFSDDFIKVFKKQNLGLRAWQKLAGQ 120
Cdd:cd06852    1 GPKSHLKKAGTPTMGGILFILAILISTL---LWADLDSPEVLLLLLLTLGFGLIGFLDDYLKVVKKRNLGLSARQKLLLQ 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 510997058 121 ILGGAVFLAVYFHEGFSHALNIPLI---GTISSSWFFSLFIIVWLVGFSNAVNLADGIDGLVAGLAIVSFATYTIIAF-R 196
Cdd:cd06852   78 FLIAIVFALLLYYFNGSGTLITLPFfknGLIDLGILYIPFAIFVIVGSSNAVNLTDGLDGLAAGVSIIVALALAIIAYlA 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 510997058 197 QNQIDVAIFGLTIIGGLIGFLIFNHKPAQIFMGDVGSLALGGALAAMSILLHREFSLLLIGLVYVIETASVMLQVASFKL 276
Cdd:cd06852  158 GNAVFLAVFCAALVGACLGFLWFNAYPAKVFMGDTGSLALGGALAALAILTKQELLLLIIGGVFVIEALSVILQVGSFKL 237
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|...
gi 510997058 277 FHKRIFKMSPIHHHFEMSGWSEWRIDISFWVFSIICSTIYLLI 319
Cdd:cd06852  238 TGKRIFKMAPLHHHFELKGWSETKVVVRFWIISLILALIGLLL 280
mraY TIGR00445
phospho-N-acetylmuramoyl-pentapeptide-transferase; Involved in peptidoglycan biosynthesis, the ...
17-318 5.93e-87

phospho-N-acetylmuramoyl-pentapeptide-transferase; Involved in peptidoglycan biosynthesis, the enzyme catalyzes the first of the lipid cycle reactions. Also known as Muramoyl-Pentapeptide Transferase (murX). [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]


Pssm-ID: 161884  Cd Length: 321  Bit Score: 263.92  E-value: 5.93e-87
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 510997058   17 TVIFMPLFIGYLRFKKEGQTIRDEGPKWHAKKNGTPTMGGLVFIVAAVISSIwvaIWLQQLTNSLWIALFILVLYGLLGF 96
Cdd:TIGR00445   1 SLLLGPKVIPMLKKLKAGQVIRSDGPKSHLKKKGTPTMGGIMIVFAIIVSTV---LWAQLGNPYVLLVLFVLLGYGFIGF 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 510997058   97 SDDFIKVFKKQNLGLRAWQKLAGQILGGAVFLAVYFHEGFSHALNIPLIGTISSS--WFFSLFIIVWLVGFSNAVNLADG 174
Cdd:TIGR00445  78 VDDYRKIKRKSNKGLTAKQKLFGQIIIALIFCTWLYYYGPDTFIYIPFIKDFMFDlgLFYILLAYFVLVGTSNAVNLTDG 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 510997058  175 IDGLVAGLAIVSFATYTIIAFRQNQID---------------VAIFGLTIIGGLIGFLIFNHKPAQIFMGDVGSLALGGA 239
Cdd:TIGR00445 158 LDGLAIGPSAIAFGALAILAWATGNANfakylhipylkdsgeLVIFCTALVGASLGFLWFNAYPAKVFMGDTGSLALGGA 237
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 510997058  240 LAAMSILLHREFSLLLIGLVYVIETASVMLQVASFKLFHKRIFKMSPIHHHFEMSGWSEWRIDISFWVFSIICSTIYLL 318
Cdd:TIGR00445 238 LGAVAILTKNEILLVIMGGVFVIETLSVILQVGSYKTTKKRIFKMAPIHHHFELKGWSEPRVVVRFWIISLLLALVALA 316
Rfe COG0472
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate ...
5-306 7.48e-78

UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase [Cell wall/membrane/envelope biogenesis]; UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase is part of the Pathway/BioSystem: Mureine biosynthesis


Pssm-ID: 440240  Cd Length: 288  Bit Score: 239.26  E-value: 7.48e-78
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 510997058   5 QFLIPLMSGFVITVIFMPLFIGYLRFKKegqtIRDEGPKWHAKKNGTPTMGGLVFIVAAVISsiwVAIWLQQLTNSLWIA 84
Cdd:COG0472    2 RLLLAFLLAFLLSLLLTPLLIRLARRLG----LVDDPNERKSHKRPTPRMGGIAIFLGFLLA---LLLLALLSNPELLLL 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 510997058  85 LFILVLYGLLGFSDDFIkvfkkqnlGLRAWQKLAGQILGGAVFLAVYFHEGFshaLNIPLIGTISSSWFFSLFIIVWLVG 164
Cdd:COG0472   75 LLGALLLGLIGFLDDLL--------GLSARQKLLGQLLAALLLVLLLLRITS---LTIPFFGLLDLGWLYIPLTVFWIVG 143
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 510997058 165 FSNAVNLADGIDGLVAGLAIVSFATYTIIAFRQNQIDVAIFGLTIIGGLIGFLIFNHKPAQIFMGDVGSLALGGALAAMS 244
Cdd:COG0472  144 VSNAVNLTDGLDGLAAGVSLIAALALAIIAYLAGQGELALLAAALAGALLGFLWFNFPPAKIFMGDTGSLFLGFALAALA 223
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 510997058 245 ILLHRE----FSLLLIGLVYVIETASVMLQVasfKLFHKRIFK--MSPIHHHFEMSGWSEWRIDISFW 306
Cdd:COG0472  224 ILGRQEgaslLLLLLILGVPVVDTLSVILQR---VLRGKRIFKadRAHLHHHLELLGWSERQVVLRFW 288
Glycos_transf_4 pfam00953
Glycosyl transferase family 4;
82-247 8.45e-29

Glycosyl transferase family 4;


Pssm-ID: 460008  Cd Length: 158  Bit Score: 108.46  E-value: 8.45e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 510997058   82 WIALFILVLYGLLGFSDDFikvfkkqnLGLRAWQKLAGQILGGAVFLAVYFHegFSHALNIPLIGTIS--SSWFFSLFII 159
Cdd:pfam00953   1 LGLLLGALLIGLIGLIDDL--------LGLSARIKLLLQALAALILLVLGGI--GLTSLGLPFGGGSLelGPWLSILLTL 70
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 510997058  160 VWLVGFSNAVNLADGIDGLVAGLAIVSFATYTIIAFRQNQIDVAIFGLTIIGGLIGFLIFNHKPAQIFMGDVGSLALGGA 239
Cdd:pfam00953  71 FAIVGLTNAVNFIDGLDGLAGGVAIIAALALGIIAYLLGNLELALLSLALLGALLGFLPFNFYPAKIFMGDSGSLFLGFL 150

                  ....*...
gi 510997058  240 LAAMSILL 247
Cdd:pfam00953 151 LAVLAIIG 158
 
Name Accession Description Interval E-value
GT_MraY cd06852
Phospho-N-acetylmuramoyl-pentapeptide-transferase (mraY) is an enzyme responsible for the ...
41-319 2.74e-112

Phospho-N-acetylmuramoyl-pentapeptide-transferase (mraY) is an enzyme responsible for the formation of the first lipid intermediate in the synthesis of bacterial cell wall peptidoglycan. It catalyzes the formation of undecaprenyl-pyrophosphoryl-N-acetylmuramoyl-pentapeptide from UDP-MurNAc-pentapeptide and undecaprenyl-phosphate. It is an integral membrane protein with possibly ten transmembrane domains.


Pssm-ID: 133462  Cd Length: 280  Bit Score: 326.75  E-value: 2.74e-112
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 510997058  41 GPKWHAKKNGTPTMGGLVFIVAAVISSIwvaIWLQQLTNSLWIALFILVLYGLLGFSDDFIKVFKKQNLGLRAWQKLAGQ 120
Cdd:cd06852    1 GPKSHLKKAGTPTMGGILFILAILISTL---LWADLDSPEVLLLLLLTLGFGLIGFLDDYLKVVKKRNLGLSARQKLLLQ 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 510997058 121 ILGGAVFLAVYFHEGFSHALNIPLI---GTISSSWFFSLFIIVWLVGFSNAVNLADGIDGLVAGLAIVSFATYTIIAF-R 196
Cdd:cd06852   78 FLIAIVFALLLYYFNGSGTLITLPFfknGLIDLGILYIPFAIFVIVGSSNAVNLTDGLDGLAAGVSIIVALALAIIAYlA 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 510997058 197 QNQIDVAIFGLTIIGGLIGFLIFNHKPAQIFMGDVGSLALGGALAAMSILLHREFSLLLIGLVYVIETASVMLQVASFKL 276
Cdd:cd06852  158 GNAVFLAVFCAALVGACLGFLWFNAYPAKVFMGDTGSLALGGALAALAILTKQELLLLIIGGVFVIEALSVILQVGSFKL 237
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|...
gi 510997058 277 FHKRIFKMSPIHHHFEMSGWSEWRIDISFWVFSIICSTIYLLI 319
Cdd:cd06852  238 TGKRIFKMAPLHHHFELKGWSETKVVVRFWIISLILALIGLLL 280
mraY TIGR00445
phospho-N-acetylmuramoyl-pentapeptide-transferase; Involved in peptidoglycan biosynthesis, the ...
17-318 5.93e-87

phospho-N-acetylmuramoyl-pentapeptide-transferase; Involved in peptidoglycan biosynthesis, the enzyme catalyzes the first of the lipid cycle reactions. Also known as Muramoyl-Pentapeptide Transferase (murX). [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]


Pssm-ID: 161884  Cd Length: 321  Bit Score: 263.92  E-value: 5.93e-87
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 510997058   17 TVIFMPLFIGYLRFKKEGQTIRDEGPKWHAKKNGTPTMGGLVFIVAAVISSIwvaIWLQQLTNSLWIALFILVLYGLLGF 96
Cdd:TIGR00445   1 SLLLGPKVIPMLKKLKAGQVIRSDGPKSHLKKKGTPTMGGIMIVFAIIVSTV---LWAQLGNPYVLLVLFVLLGYGFIGF 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 510997058   97 SDDFIKVFKKQNLGLRAWQKLAGQILGGAVFLAVYFHEGFSHALNIPLIGTISSS--WFFSLFIIVWLVGFSNAVNLADG 174
Cdd:TIGR00445  78 VDDYRKIKRKSNKGLTAKQKLFGQIIIALIFCTWLYYYGPDTFIYIPFIKDFMFDlgLFYILLAYFVLVGTSNAVNLTDG 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 510997058  175 IDGLVAGLAIVSFATYTIIAFRQNQID---------------VAIFGLTIIGGLIGFLIFNHKPAQIFMGDVGSLALGGA 239
Cdd:TIGR00445 158 LDGLAIGPSAIAFGALAILAWATGNANfakylhipylkdsgeLVIFCTALVGASLGFLWFNAYPAKVFMGDTGSLALGGA 237
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 510997058  240 LAAMSILLHREFSLLLIGLVYVIETASVMLQVASFKLFHKRIFKMSPIHHHFEMSGWSEWRIDISFWVFSIICSTIYLL 318
Cdd:TIGR00445 238 LGAVAILTKNEILLVIMGGVFVIETLSVILQVGSYKTTKKRIFKMAPIHHHFELKGWSEPRVVVRFWIISLLLALVALA 316
Rfe COG0472
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate ...
5-306 7.48e-78

UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase [Cell wall/membrane/envelope biogenesis]; UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase is part of the Pathway/BioSystem: Mureine biosynthesis


Pssm-ID: 440240  Cd Length: 288  Bit Score: 239.26  E-value: 7.48e-78
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 510997058   5 QFLIPLMSGFVITVIFMPLFIGYLRFKKegqtIRDEGPKWHAKKNGTPTMGGLVFIVAAVISsiwVAIWLQQLTNSLWIA 84
Cdd:COG0472    2 RLLLAFLLAFLLSLLLTPLLIRLARRLG----LVDDPNERKSHKRPTPRMGGIAIFLGFLLA---LLLLALLSNPELLLL 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 510997058  85 LFILVLYGLLGFSDDFIkvfkkqnlGLRAWQKLAGQILGGAVFLAVYFHEGFshaLNIPLIGTISSSWFFSLFIIVWLVG 164
Cdd:COG0472   75 LLGALLLGLIGFLDDLL--------GLSARQKLLGQLLAALLLVLLLLRITS---LTIPFFGLLDLGWLYIPLTVFWIVG 143
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 510997058 165 FSNAVNLADGIDGLVAGLAIVSFATYTIIAFRQNQIDVAIFGLTIIGGLIGFLIFNHKPAQIFMGDVGSLALGGALAAMS 244
Cdd:COG0472  144 VSNAVNLTDGLDGLAAGVSLIAALALAIIAYLAGQGELALLAAALAGALLGFLWFNFPPAKIFMGDTGSLFLGFALAALA 223
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 510997058 245 ILLHRE----FSLLLIGLVYVIETASVMLQVasfKLFHKRIFK--MSPIHHHFEMSGWSEWRIDISFW 306
Cdd:COG0472  224 ILGRQEgaslLLLLLILGVPVVDTLSVILQR---VLRGKRIFKadRAHLHHHLELLGWSERQVVLRFW 288
GT_WecA_like cd06853
This subfamily contains Escherichia coli WecA, Bacillus subtilis TagO and related proteins. ...
43-269 2.50e-39

This subfamily contains Escherichia coli WecA, Bacillus subtilis TagO and related proteins. WecA is an UDP-N-acetylglucosamine (GlcNAc):undecaprenyl-phosphate (Und-P) GlcNAc-1-phosphate transferase that catalyzes the formation of a phosphodiester bond between a membrane-associated undecaprenyl-phosphate molecule and N-acetylglucosamine 1-phosphate, which is usually donated by a soluble UDP-N-acetylglucosamine precursor. WecA participates in the biosynthesis of O antigen LPS in many enteric bacteria and is also involved in the biosynthesis of enterobacterial common antigen. A conserved short sequence motif and a conserved arginine at a cytosolic loop of this integral membrane protein were shown to be critical in recognition of substrate UDP-N-acetylglucosamine.


Pssm-ID: 133463  Cd Length: 249  Bit Score: 138.78  E-value: 2.50e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 510997058  43 KWHAKKngTPTMGGLVFIVAAVISSIWVAIWLQQLTNSLWIALFILVLYGLLGFSDDFIkvfkkqnlGLRAWQKLAGQIL 122
Cdd:cd06853    2 KVHKGP--IPRLGGLAIFLGFLLALLLALLFPFFLLPELLGLLAGATIIVLLGLLDDLF--------DLSPKVKLLGQIL 71
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 510997058 123 ggAVFLAVYFHEGFSHALNIPLIGTISSSWFFSLFIIVWLVGFSNAVNLADGIDGLVAGLAIVSFATYTIIAFRQNQIDV 202
Cdd:cd06853   72 --AALIVVFGGGVILSLLGPFGGGIILLGWLSIPLTVLWIVGIINAINLIDGLDGLAGGVALIASLALAILALLNGQVLV 149
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 510997058 203 AIFGLTIIGGLIGFLIFNHKPAQIFMGDVGSLALGGALAAMSILLHRE-------FSLLLIGLVYVIETASVML 269
Cdd:cd06853  150 ALLALALAGALLGFLPYNFHPARIFMGDAGSLFLGFLLAVLSILGTQKsstaispVVPLLILAVPLFDTLFVII 223
GT_MraY-like cd06499
Glycosyltransferase 4 (GT4) includes both eukaryotic and prokaryotic UDP-D-N-acetylhexosamine: ...
50-242 1.06e-30

Glycosyltransferase 4 (GT4) includes both eukaryotic and prokaryotic UDP-D-N-acetylhexosamine:polyprenol phosphate D-N-acetylhexosamine-1-phosphate transferases. They catalyze the transfer of a D-N-acetylhexosamine 1-phosphate to a membrane-bound polyprenol phosphate, which is the initiation step of protein N-glycosylation in eukaryotes and peptidoglycan biosynthesis in bacteria. One member, D-N-acetylhexosamine 1-phosphate transferase (GPT) is a eukaryotic enzyme, which is specific for UDP-GlcNAc as donor substrate and dolichol-phosphate as the membrane bound acceptor. The bacterial members MraY, WecA, and WbpL/WbcO utilize undecaprenol phosphate as the acceptor substrate, but use different UDP-sugar donor substrates. MraY-type transferases are highly specific for UDP-N-acetylmuramate-pentapeptide, whereas WecA proteins are selective for UDP-N-acetylglucosamine (UDP-GlcNAc). The WbcO/WbpL substrate specificity has not yet been determined, but the structure of their biosynthetic endproducts implies that UDP-N-acetyl-D-fucosamine (UDP-FucNAc) and/or UDPN-acetyl-D-quinosamine (UDP-QuiNAc) are used. The eukaryotic reaction is the first step in the assembly of dolichol-linked oligosaccharide intermediates and is essential for N-glycosylation. The prokaryotic reactions lead to the formation of polyprenol-linked oligosaccharides involved in bacterial cell wall and peptidoglycan assembly. Archaeal and eukaryotic enzymes may use the same substrates and are evolutionarily closer than the bacterial enzyme. Archaea possess the same N-glycosylation pathway as eukaryotes. A glycosyl transferase gene Mv1751 in M. voltae encodes for the enzyme that carries out the first step in the pathway, the attachment of GlcNAc to a dolichol lipid carrier in the membrane. A lethal mutation in the alg7 (GPT) gene in Saccharomyces cerevisiae was successfully complemented with Mv1751, the archaea gene.


Pssm-ID: 133460  Cd Length: 185  Bit Score: 114.32  E-value: 1.06e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 510997058  50 GTPTMGGLVFIVAAVISsiwVAIWLQQLTNSLWIALFILVLYGLLGFSDDFIKVFKkqnlGLRAWQKLAGQILGGavfLA 129
Cdd:cd06499    1 PTPTMGGLAILLGFLLG---VLLYIPHSNTLILLALLSGLVAGIVGFIDDLLGLKV----ELSEREKLLLQILAA---LF 70
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 510997058 130 VYFHEGFSHALNIPLIGTISSSWFFSLFIIVWLVGFSNAVNLADGIDGLVAGLAIVSFATYTIIAFRQNQIDVAIFGLTI 209
Cdd:cd06499   71 LLLIGGGHTTVTTPLGFVLDLGIFYIPFAIIAIVGATNAVNLIDGMDGLAAGISVIASIACALFALLSGQTTSALLFIIL 150
                        170       180       190
                 ....*....|....*....|....*....|...
gi 510997058 210 IGGLIGFLIFNHKPAQIFMGDVGSLALGGALAA 242
Cdd:cd06499  151 AGACLGFLYFNFYPAKIFMGDTGSYFLGAAYAA 183
GT_WbpL_WbcO_like cd06854
The members of this subfamily catalyze the formation of a phosphodiester bond between a ...
51-264 8.93e-30

The members of this subfamily catalyze the formation of a phosphodiester bond between a membrane-associated undecaprenyl-phosphate (Und-P) molecule and N-acetylhexosamine 1-phosphate, which is usually donated by a soluble UDP-N-acetylhexosamine precursor. The WbcO/WbpL substrate specificity has not yet been determined, but the structure of their biosynthetic end products implies that UDP-N-acetyl-D-fucosamine (UDP-FucNAc) and/or UDPN-acetyl-D-quinosamine (UDP-QuiNAc) are used. The subgroup of bacterial UDP-HexNAc:polyprenol-P HexNAc-1-P transferases includes the WbcO protein from Yersinia enterocolitica and the WbpL protein from Pseudomonas aeruginosa. These transferases initiate LPS O-antigen biosynthesis. Similar to other GlcNAc/MurNAc-1-P transferase family members, WbpL is a highly hydrophobic protein possessing 11 predicted transmembrane segments.


Pssm-ID: 133464  Cd Length: 253  Bit Score: 113.88  E-value: 8.93e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 510997058  51 TPTMGGLVFIVAAVISSIWVAIWLQQLTNSLWIALFILVLYGLLGFSDDFIkvfkkqnlGLRAWQKLAGQILggAVFLAV 130
Cdd:cd06854   15 TPRGGGIAFVLAFLLALLLAAAAGPLNDLSYLLLLIGLLLLAAVGFIDDLR--------SLSPKIRLLVQLL--AAALAL 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 510997058 131 YFHEGFSHALNIPLIGtisssWFFSLFIIVWLVGFSNAVNLADGIDGLVAGLAIVSFATYTIIAFRQNQIDVAIFGLTII 210
Cdd:cd06854   85 YALGPLTSLLLNFLPP-----WLIALLLLLAIVWIINLYNFMDGIDGLAGGEALVVFLALALLGYLAGEPALALLALALA 159
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 510997058 211 GGLIGFLIFNHKPAQIFMGDVGSLALGGALAAMSILLHRE----FSLLLIGLVYVIET 264
Cdd:cd06854  160 GALLGFLPFNWPPAKIFMGDVGSTFLGFLLAALLLLLALSgqspWAWLLLLSPFLVDA 217
Glycos_transf_4 pfam00953
Glycosyl transferase family 4;
82-247 8.45e-29

Glycosyl transferase family 4;


Pssm-ID: 460008  Cd Length: 158  Bit Score: 108.46  E-value: 8.45e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 510997058   82 WIALFILVLYGLLGFSDDFikvfkkqnLGLRAWQKLAGQILGGAVFLAVYFHegFSHALNIPLIGTIS--SSWFFSLFII 159
Cdd:pfam00953   1 LGLLLGALLIGLIGLIDDL--------LGLSARIKLLLQALAALILLVLGGI--GLTSLGLPFGGGSLelGPWLSILLTL 70
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 510997058  160 VWLVGFSNAVNLADGIDGLVAGLAIVSFATYTIIAFRQNQIDVAIFGLTIIGGLIGFLIFNHKPAQIFMGDVGSLALGGA 239
Cdd:pfam00953  71 FAIVGLTNAVNFIDGLDGLAGGVAIIAALALGIIAYLLGNLELALLSLALLGALLGFLPFNFYPAKIFMGDSGSLFLGFL 150

                  ....*...
gi 510997058  240 LAAMSILL 247
Cdd:pfam00953 151 LAVLAIIG 158
GT_GPT_archaea cd06856
UDP-GlcNAc:dolichol-P GlcNAc-1-P transferase (GPT)-like proteins in archaea. Eukaryotic GPT ...
52-263 3.26e-25

UDP-GlcNAc:dolichol-P GlcNAc-1-P transferase (GPT)-like proteins in archaea. Eukaryotic GPT catalyzes the transfer of GlcNAc-1-P from UDP-GlcNAc to dolichol-P to form GlcNAc-P-P-dolichol. The reaction is the first step in the assembly of dolichol-linked oligosaccharide intermediates and is essential for eukaryotic N-linked glycosylation. Evidence for the existence of the N-glycosylation pathway in archaea has emerged and genes responsible for the pathway have been identified. A glycosyl transferase gene Mv1751 in M. voltae encodes for the enzyme that carries out the first step in the pathway, the attachment of GlcNAc to a dolichol lipid carrier in the membrane. A lethal mutation in the alg7 (GPT) gene in Saccharomyces cerevisiae was successfully complemented with Mv1751, the archaea gene, indicating that eukaryotic and archaeal enzymes may use the same substrates and are evolutionarily closer than the bacterial enzyme, which uses a different substrate.


Pssm-ID: 133466  Cd Length: 280  Bit Score: 102.33  E-value: 3.26e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 510997058  52 PTMGGLVFIVAAVISSIwVAIWLQQLTNSLWIALFILvLYGLLGFSDDFikvfkkqnLGLRAWQKLAGQILGGAVFLAVY 131
Cdd:cd06856   14 PEMGGIAVLLGFSLGLL-FLSALTHSVEALALLITSL-LAGLIGLLDDI--------LGLSQSEKVLLTALPAIPLLVLK 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 510997058 132 fheGFSHALNIPLIGTISSSWFFSLFIIVWLVGFSNAVNLADGIDGLVAGLAIVSFATYTIIAFRQNQIDVAIFGLTIIG 211
Cdd:cd06856   84 ---AGNPLTSLPIGGRVLGILYYLLIVPLGITGASNAFNMLAGFNGLEAGMGIIILLALAIILLINGDYDALIIALILVA 160
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|..
gi 510997058 212 GLIGFLIFNHKPAQIFMGDVGSLALGGALAAMSILLHREFSLLLIGLVYVIE 263
Cdd:cd06856  161 ALLAFLLYNKYPAKVFPGDVGTLPIGALIGTIAVLGGLEIILLILLLPYVID 212
GT_MraY_like cd06912
This subfamily is composed of uncharacterized bacterial glycosyltransferases in the MraY-like ...
51-244 1.04e-20

This subfamily is composed of uncharacterized bacterial glycosyltransferases in the MraY-like family. This family contains both eukaryotic and prokaryotic UDP-D-N-acetylhexosamine:polyprenol phosphate D-N-acetylhexosamine-1-phosphate transferases, which catalyze the transfer of a D-N-acetylhexosamine 1-phosphate to a membrane-bound polyprenol phosphate. This is the initiation step of protein N-glycosylation in eukaryotes and peptidoglycan biosynthesis in bacteria. The three bacterial members MraY, WecA, and WbpL/WbcO, utilize undecaprenol phosphate as the acceptor substrate, but use different UDP-sugar donor substrates. MraY-type transferases are highly specific for UDP-N-acetylmuramate-pentapeptide, whereas WecA proteins are selective for UDP-N-acetylglucosamine (UDP-GlcNAc). The WbcO/WbpL substrate specificity has not yet been determined, but the structure of their biosynthetic end products implies that UDP-N-acetyl-D-fucosamine (UDP-FucNAc) and/or UDPN-acetyl-D-quinosamine (UDP-QuiNAc) are used. The prokaryotic enzyme-catalyzed reactions lead to the formation of polyprenol-linked oligosaccharides involved in bacterial cell wall and peptidoglycan assembly.


Pssm-ID: 133467  Cd Length: 193  Bit Score: 87.68  E-value: 1.04e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 510997058  51 TPTMGGLVFIVAAVISSIWVAIWLQQLTNSLWIALFILVLyglLGFSDDFIKvfkkqnlGLRAWQKLAGQILGGavFLAV 130
Cdd:cd06912   11 TPRIGGVAIFLGLLAGLLLLSLLSGSLLLLLLLAALPAFL---AGLLEDITK-------RVSPRIRLLATFLSA--LLAV 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 510997058 131 YFHEGFSHALNIPLIGTISSSWFFSLFI-IVWLVGFSNAVNLADGIDGLVAGLAIVSFATYTIIAFRQNQIDVAIFGLTI 209
Cdd:cd06912   79 WLLGASITRLDLPGLDLLLSFPPFAIIFtIFAVAGVANAFNIIDGFNGLASGVAIISLLSLALVAFQVGDTDLAFLALLL 158
                        170       180       190
                 ....*....|....*....|....*....|....*
gi 510997058 210 IGGLIGFLIFNHKPAQIFMGDVGSLALGGALAAMS 244
Cdd:cd06912  159 AGALLGFLIFNFPFGKIFLGDGGAYLLGFLLAWLA 193
GT_GPT_like cd06851
This family includes eukaryotic UDP-GlcNAc:dolichol-P GlcNAc-1-P transferase (GPT) and ...
52-262 1.40e-11

This family includes eukaryotic UDP-GlcNAc:dolichol-P GlcNAc-1-P transferase (GPT) and archaeal GPT-like glycosyltransferases. Eukaryotic GPT catalyzes the transfer of GlcNAc-1-P from UDP-GlcNAc to dolichol-P to form GlcNAc-P-P-dolichol. The reaction is the first step in the assembly of dolichol-linked oligosaccharide intermediates and is essential for eukaryotic N-linked glycosylation. GPT activity has been identified in all eukaryotic cells examined to date. Evidence for the existence of the N-glycosylation pathway in archaea has emerged and genes responsible for the pathway have been identified. A glycosyl transferase gene Mv1751 in M. voltae encodes for the enzyme that carries out the first step in the pathway, the attachment of GlcNAc to a dolichol lipid carrier in the membrane. A lethal mutation in the alg7 (GPT) gene in Saccharomyces cerevisiae was successfully complemented with Mv1751, the archaeal gene, indicating eukaryotic and archaeal enzymes may use the same substrates and are evolutionarily closer than the bacterial enzyme, which uses a different substrate.


Pssm-ID: 133461  Cd Length: 223  Bit Score: 62.90  E-value: 1.40e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 510997058  52 PTMGGLVFIVAAVISSI----WVAIWLQQLTNSLWIALFILVLYGL-LGFSDDFikvfkkqnLGLRAWQKLAGQILGGAV 126
Cdd:cd06851   14 PEPGGISILIGFVASEItlifFPFLSFPHFPISEILAALITSVLGFsVGIIDDR--------LTMGGWFKPVALAFAAAP 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 510997058 127 FLAVYFhegFSHALNIPLIGTISSSWFFSLFIIVWL-VGFSNAVNLADGIDGLVAGLAIVSFATYTIIAFRQNQIDVAIF 205
Cdd:cd06851   86 ILLLGA---YDSNLDFPLFGGSVKIPSLYLVLVVFMiVITGNAFNSIAGLNGVEAGFTTIISFALAISLLVQQNYEIGIA 162
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 510997058 206 GLTIIGGLIGFLIFNHKPAQIFMGDVGSLALGGALAAMSILLHREFSLLLIGLVYVI 262
Cdd:cd06851  163 CLCLAFASLAFLYYNKYPSRIFPGDTGAYMFGATYAVVAILGEVEKIAAVAFIPAII 219
GT_GPT_euk cd06855
UDP-GlcNAc:dolichol-P GlcNAc-1-P transferase (GPT) catalyzes the transfer of GlcNAc-1-P from ...
84-256 8.35e-07

UDP-GlcNAc:dolichol-P GlcNAc-1-P transferase (GPT) catalyzes the transfer of GlcNAc-1-P from UDP-GlcNAc to dolichol-P to form GlcNAc-P-P-dolichol. The reaction is the first step in the assembly of dolichol-linked oligosaccharide intermediates and is essential for eukaryotic N-glycosylation. GPT activity has been identified in all eukaryotic cells examined to date. A series of six conserved motifs designated A through F, ranging in length from 5 to 13 amino acid residues, has been identified in this family. They have been determined to be important for stable expression, substrate binding, or catalytic activities.


Pssm-ID: 133465  Cd Length: 283  Bit Score: 49.55  E-value: 8.35e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 510997058  84 ALFILVLYGLLGFSDDFikvfkkqnLGLRAWQKLAGQILGGAVFLAVYFHEGFS---HALNIPLIGT-ISSSWFFSLFII 159
Cdd:cd06855   65 ALLSICCMTFLGFADDV--------LDLRWRHKLILPTFASLPLLMVYYGNTGItlpIVPLRPLLGTlIDLGILYYVYMI 136
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 510997058 160 VWLVGFSNAVNLADGIDGLVAGLAIV---SFATYTIIAF--------RQNQIDVAIFGLTIIGGLIGFLIFNHKPAQIFM 228
Cdd:cd06855  137 LLAVFCTNSINIYAGINGLEVGQSLVialSILLYNLLELngssgsmtLDAHLFSLYLLLPFIAVSLALLYYNWYPSKVFV 216
                        170       180
                 ....*....|....*....|....*...
gi 510997058 229 GDVGSLALGGALAAMSILLHREFSLLLI 256
Cdd:cd06855  217 GDTFTYFAGMVFAVVGILGHFSKTLLLF 244
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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