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Conserved domains on  [gi|505396747|ref|WP_015583849|]
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MULTISPECIES: D-alanyl-D-alanine endopeptidase [Raoultella]

Protein Classification

D-alanyl-D-alanine endopeptidase( domain architecture ID 10013859)

D-alanyl-D-alanine endopeptidase specifically hydrolyzes the DD-diaminopimelate-alanine bonds in high-molecular-mass murein sacculi and may play a specialized role in remodeling the cell wall

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
pbpG PRK11669
D-alanyl-D-alanine endopeptidase; Provisional
16-304 0e+00

D-alanyl-D-alanine endopeptidase; Provisional


:

Pssm-ID: 236952  Cd Length: 306  Bit Score: 597.05  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505396747  16 AVPFAPQAIAKTPVAATALQP-EIASGSAMIVDLASKKIIYQSQPDLVRPIASITKVMTAMVVLDAHLPLDEMLTVDISH 94
Cdd:PRK11669  16 GVPFAPQAVAKTAAATTASQPqEIASGSAMVVDLNTNKVIYSSNPDLVVPIASITKLMTAMVVLDAKLPLDEKLKVDISQ 95
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505396747  95 TPEMKGIYSRVRLNSQISRRNMLLLALMSSENRAAASLAHHYPGGYDAFIRAMNAKAQALGMTHTRYVEPTGLSIHNVST 174
Cdd:PRK11669  96 TPEMKGVYSRVRLNSEISRKDMLLLALMSSENRAAASLAHHYPGGYKAFIKAMNAKAKALGMTNTRYVEPTGLSIHNVST 175
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505396747 175 ARDLTKLLMATEQYPLIGQLSTTKEDTATFAHPAYTLPFRNTNHLVYRDNWNIQLTKTGFTNAAGHCLVMRTVINQRPVA 254
Cdd:PRK11669 176 ARDLTKLLIASKQYPLIGQLSTTREKTATFRKPNYTLPFRNTNHLVYRDNWNIQLTKTGFTNAAGHCLVMRTVINNRPVA 255
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|
gi 505396747 255 LVVMDAFGKYTHFADASRLRTWVETGKVMPVPASALSYKKQREAQMADAM 304
Cdd:PRK11669 256 LVVLDAFGKYTHFADASRLRTWIETGKVTPVPAAALSYKKQKAAQMAAAQ 305
 
Name Accession Description Interval E-value
pbpG PRK11669
D-alanyl-D-alanine endopeptidase; Provisional
16-304 0e+00

D-alanyl-D-alanine endopeptidase; Provisional


Pssm-ID: 236952  Cd Length: 306  Bit Score: 597.05  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505396747  16 AVPFAPQAIAKTPVAATALQP-EIASGSAMIVDLASKKIIYQSQPDLVRPIASITKVMTAMVVLDAHLPLDEMLTVDISH 94
Cdd:PRK11669  16 GVPFAPQAVAKTAAATTASQPqEIASGSAMVVDLNTNKVIYSSNPDLVVPIASITKLMTAMVVLDAKLPLDEKLKVDISQ 95
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505396747  95 TPEMKGIYSRVRLNSQISRRNMLLLALMSSENRAAASLAHHYPGGYDAFIRAMNAKAQALGMTHTRYVEPTGLSIHNVST 174
Cdd:PRK11669  96 TPEMKGVYSRVRLNSEISRKDMLLLALMSSENRAAASLAHHYPGGYKAFIKAMNAKAKALGMTNTRYVEPTGLSIHNVST 175
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505396747 175 ARDLTKLLMATEQYPLIGQLSTTKEDTATFAHPAYTLPFRNTNHLVYRDNWNIQLTKTGFTNAAGHCLVMRTVINQRPVA 254
Cdd:PRK11669 176 ARDLTKLLIASKQYPLIGQLSTTREKTATFRKPNYTLPFRNTNHLVYRDNWNIQLTKTGFTNAAGHCLVMRTVINNRPVA 255
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|
gi 505396747 255 LVVMDAFGKYTHFADASRLRTWVETGKVMPVPASALSYKKQREAQMADAM 304
Cdd:PRK11669 256 LVVLDAFGKYTHFADASRLRTWIETGKVTPVPAAALSYKKQKAAQMAAAQ 305
Peptidase_S11 pfam00768
D-alanyl-D-alanine carboxypeptidase;
35-261 1.28e-95

D-alanyl-D-alanine carboxypeptidase;


Pssm-ID: 425859 [Multi-domain]  Cd Length: 234  Bit Score: 282.35  E-value: 1.28e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505396747   35 QPEIASGSAMIVDLASKKIIYQSQPDLVRPIASITKVMTAMVVLDAHLP--LDEMLTVDISHTPEMKG---IYSRVR-LN 108
Cdd:pfam00768   3 APEIAAKSAILVDYNTGKVLYEKNPDQVRPIASITKLMTAYVVLEALKAgkIKEDDMVTISEDAWATGnpgSSNIFLkPG 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505396747  109 SQISRRNMLLLALMSSENRAAASLAHHYPGGYDAFIRAMNAKAQALGMTHTRYVEPTGLSIHN-VSTARDLTKLLMATEQ 187
Cdd:pfam00768  83 SQVSVKDLLRGALVSSGNDAAVALAEHIAGSEKAFVK*MNAKAKELGLKNTRFVNPTGLDAHGqYSSARDMAILAKALIK 162
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 505396747  188 YpLIGQLSTTKEDTATFAHpAYTLPFRNTNHLVYRDNWNIQLTKTGFTNAAGHCLVMRTVINQRPVALVVMDAF 261
Cdd:pfam00768 163 D-LPEELSITKEKSFTFRG-INKINQRNRNGLLWDKTWNVDGLKTGYTNEAGYCLVASATKGGMRLISVVMGAF 234
DacC COG1686
D-alanyl-D-alanine carboxypeptidase [Cell wall/membrane/envelope biogenesis];
23-278 5.98e-85

D-alanyl-D-alanine carboxypeptidase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 441292 [Multi-domain]  Cd Length: 324  Bit Score: 258.61  E-value: 5.98e-85
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505396747  23 AIAKTPVAATALQPEIASGSAMIVDLASKKIIYQSQPDLVRPIASITKVMTAMVVLDAH----LPLDEMLTVDiSHTPEM 98
Cdd:COG1686   11 LLLAAAAAAPAAPPDIAAKSAILIDADTGQVLYEKNADERLPPASLTKLMTAYVVLEALkagkISLDDKVTVS-EEAART 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505396747  99 KGIYSRVRLNSQISRRNMLLLALMSSENRAAASLAHHYPGGYDAFIRAMNAKAQALGMTHTRYVEPTGLSI-HNVSTARD 177
Cdd:COG1686   90 GGSKMGLKPGEQVTVEDLLKGLLLQSGNDAAVALAEHIAGSEEAFVALMNAKAKELGMTNTHFVNPTGLPDpGHYSTARD 169
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505396747 178 LTKLLMAT-EQYPLIGQLSTTKEDTatfAHPAYTLPFRNTNHLVYRDNWnIQLTKTGFTNAAGHCLVMRTVINQRPVALV 256
Cdd:COG1686  170 LALLARAAiKDYPEFYEIFSTKEFT---FPNGRGITLRNTNRLLGRYPG-VDGLKTGYTDAAGYCLVASAKRGGRRLIAV 245
                        250       260
                 ....*....|....*....|..
gi 505396747 257 VMDAFGKYTHFADASRLRTWVE 278
Cdd:COG1686  246 VLGAPSEKARFADAAKLLDYGF 267
 
Name Accession Description Interval E-value
pbpG PRK11669
D-alanyl-D-alanine endopeptidase; Provisional
16-304 0e+00

D-alanyl-D-alanine endopeptidase; Provisional


Pssm-ID: 236952  Cd Length: 306  Bit Score: 597.05  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505396747  16 AVPFAPQAIAKTPVAATALQP-EIASGSAMIVDLASKKIIYQSQPDLVRPIASITKVMTAMVVLDAHLPLDEMLTVDISH 94
Cdd:PRK11669  16 GVPFAPQAVAKTAAATTASQPqEIASGSAMVVDLNTNKVIYSSNPDLVVPIASITKLMTAMVVLDAKLPLDEKLKVDISQ 95
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505396747  95 TPEMKGIYSRVRLNSQISRRNMLLLALMSSENRAAASLAHHYPGGYDAFIRAMNAKAQALGMTHTRYVEPTGLSIHNVST 174
Cdd:PRK11669  96 TPEMKGVYSRVRLNSEISRKDMLLLALMSSENRAAASLAHHYPGGYKAFIKAMNAKAKALGMTNTRYVEPTGLSIHNVST 175
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505396747 175 ARDLTKLLMATEQYPLIGQLSTTKEDTATFAHPAYTLPFRNTNHLVYRDNWNIQLTKTGFTNAAGHCLVMRTVINQRPVA 254
Cdd:PRK11669 176 ARDLTKLLIASKQYPLIGQLSTTREKTATFRKPNYTLPFRNTNHLVYRDNWNIQLTKTGFTNAAGHCLVMRTVINNRPVA 255
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|
gi 505396747 255 LVVMDAFGKYTHFADASRLRTWVETGKVMPVPASALSYKKQREAQMADAM 304
Cdd:PRK11669 256 LVVLDAFGKYTHFADASRLRTWIETGKVTPVPAAALSYKKQKAAQMAAAQ 305
Peptidase_S11 pfam00768
D-alanyl-D-alanine carboxypeptidase;
35-261 1.28e-95

D-alanyl-D-alanine carboxypeptidase;


Pssm-ID: 425859 [Multi-domain]  Cd Length: 234  Bit Score: 282.35  E-value: 1.28e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505396747   35 QPEIASGSAMIVDLASKKIIYQSQPDLVRPIASITKVMTAMVVLDAHLP--LDEMLTVDISHTPEMKG---IYSRVR-LN 108
Cdd:pfam00768   3 APEIAAKSAILVDYNTGKVLYEKNPDQVRPIASITKLMTAYVVLEALKAgkIKEDDMVTISEDAWATGnpgSSNIFLkPG 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505396747  109 SQISRRNMLLLALMSSENRAAASLAHHYPGGYDAFIRAMNAKAQALGMTHTRYVEPTGLSIHN-VSTARDLTKLLMATEQ 187
Cdd:pfam00768  83 SQVSVKDLLRGALVSSGNDAAVALAEHIAGSEKAFVK*MNAKAKELGLKNTRFVNPTGLDAHGqYSSARDMAILAKALIK 162
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 505396747  188 YpLIGQLSTTKEDTATFAHpAYTLPFRNTNHLVYRDNWNIQLTKTGFTNAAGHCLVMRTVINQRPVALVVMDAF 261
Cdd:pfam00768 163 D-LPEELSITKEKSFTFRG-INKINQRNRNGLLWDKTWNVDGLKTGYTNEAGYCLVASATKGGMRLISVVMGAF 234
DacC COG1686
D-alanyl-D-alanine carboxypeptidase [Cell wall/membrane/envelope biogenesis];
23-278 5.98e-85

D-alanyl-D-alanine carboxypeptidase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 441292 [Multi-domain]  Cd Length: 324  Bit Score: 258.61  E-value: 5.98e-85
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505396747  23 AIAKTPVAATALQPEIASGSAMIVDLASKKIIYQSQPDLVRPIASITKVMTAMVVLDAH----LPLDEMLTVDiSHTPEM 98
Cdd:COG1686   11 LLLAAAAAAPAAPPDIAAKSAILIDADTGQVLYEKNADERLPPASLTKLMTAYVVLEALkagkISLDDKVTVS-EEAART 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505396747  99 KGIYSRVRLNSQISRRNMLLLALMSSENRAAASLAHHYPGGYDAFIRAMNAKAQALGMTHTRYVEPTGLSI-HNVSTARD 177
Cdd:COG1686   90 GGSKMGLKPGEQVTVEDLLKGLLLQSGNDAAVALAEHIAGSEEAFVALMNAKAKELGMTNTHFVNPTGLPDpGHYSTARD 169
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505396747 178 LTKLLMAT-EQYPLIGQLSTTKEDTatfAHPAYTLPFRNTNHLVYRDNWnIQLTKTGFTNAAGHCLVMRTVINQRPVALV 256
Cdd:COG1686  170 LALLARAAiKDYPEFYEIFSTKEFT---FPNGRGITLRNTNRLLGRYPG-VDGLKTGYTDAAGYCLVASAKRGGRRLIAV 245
                        250       260
                 ....*....|....*....|..
gi 505396747 257 VMDAFGKYTHFADASRLRTWVE 278
Cdd:COG1686  246 VLGAPSEKARFADAAKLLDYGF 267
PRK10001 PRK10001
serine-type D-Ala-D-Ala carboxypeptidase;
19-296 3.90e-20

serine-type D-Ala-D-Ala carboxypeptidase;


Pssm-ID: 182189 [Multi-domain]  Cd Length: 400  Bit Score: 90.05  E-value: 3.90e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505396747  19 FAPQAIAKTPVAATalqPEIASGSAMIVDLASKKIIYQSQPDLVRPIASITKVMTAMVVLDA----HLPLDEMLTVD--- 91
Cdd:PRK10001  21 FAPTAFAAEQTVEA---PSVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVVGQAlkadKIKLTDMVTVGkda 97
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505396747  92 -ISHTPEMKGiySRV---RLNSQISRRNMLLLALMSSENRAAASLAHHYPGGYDAFIRAMNAKAQALGMTHTRYVEPTGL 167
Cdd:PRK10001  98 wATGNPALRG--SSVmflKPGDQVSVADLNKGVIIQSGNDACIALADYVAGSQESFIGLMNGYAKKLGLTNTTFQTVHGL 175
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505396747 168 SI-HNVSTARD---LTKLLM--ATEQYPLigqlstTKEDTATF---AHPaytlpfrNTNHLVYRDNWNIQLTKTGFTNAA 238
Cdd:PRK10001 176 DApGQFSTARDmalLGKALIhdVPEEYAI------HKEKEFTFnkiRQP-------NRNRLLWSSNLNVDGMKTGTTAGA 242
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 505396747 239 GHCLVMRTVINQRPVALVVMDAFGKYTHFADASRLRTW----VETgkVMPVPASAlSYKKQR 296
Cdd:PRK10001 243 GYNLVASATQGDMRLISVVLGAKTDRIRFNESEKLLTWgfrfFET--VTPIKPDA-TFVTQR 301
dacD PRK11397
serine-type D-Ala-D-Ala carboxypeptidase DacD;
22-276 3.22e-18

serine-type D-Ala-D-Ala carboxypeptidase DacD;


Pssm-ID: 183117 [Multi-domain]  Cd Length: 388  Bit Score: 84.10  E-value: 3.22e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505396747  22 QAIAKTPVAATALQPEIASGSAMIVDLASKKIIYQSQPDLVRPIASITKVMTAMVV---LDAH-LPLDEMLTVD----IS 93
Cdd:PRK11397  18 SAFAAENIPFSPQPPAIDAGSWVLMDYTTGQILTAGNEHQQRNPASLTKLMTGYVVdraIDSHrITPDDIVTVGrdawAK 97
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505396747  94 HTPEMKGiYSRVRLNS--QISRRNMLLLALMSSENRAAASLAHHYPGGYDAFIRAMNAKAQALGMTHTRYVEPTGLSI-H 170
Cdd:PRK11397  98 DNPVFVG-SSLMFLKEgdRVSVRDLSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYVEKLHLKDTHFETVHGLDApG 176
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505396747 171 NVSTARDLTKLLMAT-----EQYPLIGQLSTTKEDTATfahpaytlpfRNTNHLVYRDNWNIQLTKTGFTNAAGHCLVMR 245
Cdd:PRK11397 177 QHSSAYDLAVLSRAIihgepEFYHMYSEKSLTWNGITQ----------QNRNGLLWDKTMNVDGLKTGHTSGAGFNLIAS 246
                        250       260       270
                 ....*....|....*....|....*....|.
gi 505396747 246 TVINQRPVALVVMDAFGKYTHFADASRLRTW 276
Cdd:PRK11397 247 AVDGQRRLIAVVMGADSAKGREEQARKLLRW 277
PRK10793 PRK10793
D-alanyl-D-alanine carboxypeptidase fraction A; Provisional
36-276 1.08e-12

D-alanyl-D-alanine carboxypeptidase fraction A; Provisional


Pssm-ID: 182736 [Multi-domain]  Cd Length: 403  Bit Score: 67.96  E-value: 1.08e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505396747  36 PEIASGSAMIVDLASKKIIYQSQPDLVRPIASITKVMTAMVVLDA----HLPLDEMLTVD----ISHTPEMKGiYSRVRL 107
Cdd:PRK10793  42 PQIDAESYILIDYNSGKVLAEQNADVRRDPASLTKMMTSYVIGQAmkagKFKETDLVTVGndawATGNPVFKG-SSLMFL 120
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505396747 108 N--SQISRRNMLLLALMSSENRAAASLAHHYPGGYDAFIRAMNAKAQALGMTHTRYVEPTGLSIH-NVSTARDltkllMA 184
Cdd:PRK10793 121 KpgMQVPVSQLIRGINLQSGNDACVAMADYVAGSQDAFVGLMNSYVNALGLKNTHFQTVHGLDADgQYSSARD-----MA 195
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505396747 185 teqypLIGQ---------LSTTKEDTATFAHPAYTlpfrNTNHLVYRDNWNIQLTKTGFTNAAGHCLVMRTVINQRPVAL 255
Cdd:PRK10793 196 -----LIGQalirdvpneYAIYKEKEFTFNGIRQL----NRNGLLWDNSLNVDGIKTGHTDKAGYNLVASATEGQMRLIS 266
                        250       260
                 ....*....|....*....|.
gi 505396747 256 VVMDAFGKYTHFADASRLRTW 276
Cdd:PRK10793 267 AVMGGRTFKGRETESKKLLTW 287
Beta-lactamase2 pfam13354
Beta-lactamase enzyme family; This is the catalytic domain of class A beta-lactamases. It is ...
42-184 1.50e-08

Beta-lactamase enzyme family; This is the catalytic domain of class A beta-lactamases. It is closely related to Beta-lactamase, pfam00144, the serine beta-lactamase-like superfamily, which contains the distantly related pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.


Pssm-ID: 463854 [Multi-domain]  Cd Length: 215  Bit Score: 54.20  E-value: 1.50e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505396747   42 SAMIVDLASKKIIYQsQPDLVRPIASITKVMTAMVVLDA----HLPLDEMLTVDISHTPEMKGIYSRVRLNSQISRRNML 117
Cdd:pfam13354   1 GIYVRDLDTGEELGI-NGDRSFPAASTIKVPILLAVLEQvdegKLSLDERLTVTAEDKVGGSGILQYLPDGSQLSLRDLL 79
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 505396747  118 LLALMSSENRAAASLahhypggydafIR-----AMNAKAQALGMTHTRYVEPTGLSIH------NVSTARDLTKLLMA 184
Cdd:pfam13354  80 TLMIAVSDNTATNLL-----------IDrlgleAVNARLRALGLRDTRLRRKLPDLRAadkggtNTTTARDMAKLLEA 146
PenP COG2367
Beta-lactamase class A [Defense mechanisms];
25-182 1.22e-06

Beta-lactamase class A [Defense mechanisms];


Pssm-ID: 441934 [Multi-domain]  Cd Length: 276  Bit Score: 49.13  E-value: 1.22e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505396747  25 AKTPVAATALQPEIAS--------GSAMIVDLASKKIIYQsQPDLVRPIASITKVMTAMVVLDA----HLPLDEMLTVdi 92
Cdd:COG2367   11 AAAAAPASALEAELAAleaalggrVGVYVLDLDTGETVGI-NADERFPAASTFKLPVLAAVLRQvdagKLSLDERVTL-- 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505396747  93 shTPEMK----GIYSRVRLNSQISRRNMLLLALMSSENRAAASLAHHYpgGYDAFiramNAKAQALGMTHTR--YVEPTG 166
Cdd:COG2367   88 --TPEDLvggsGILQKLPDGTGLTLRELAELMITVSDNTATNLLLRLL--GPDAV----NAFLRSLGLTDTRldRKEPDL 159
                        170       180
                 ....*....|....*....|
gi 505396747 167 LSI----HNVSTARDLTKLL 182
Cdd:COG2367  160 NELpgdgRNTTTPRDMARLL 179
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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