NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|505030401|ref|WP_015217503|]
View 

MULTISPECIES: Mo-dependent nitrogenase C-terminal domain-containing protein [Anabaena]

Protein Classification

Mo-dependent nitrogenase C-terminal domain-containing protein( domain architecture ID 10536622)

Mo-dependent nitrogenase C-terminal domain-containing protein

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
Mo-nitro_C pfam06967
Mo-dependent nitrogenase C-terminus; This family represents the C-terminus (approximately 80 ...
 45-122 4.38e-57

Mo-dependent nitrogenase C-terminus; This family represents the C-terminus (approximately 80 residues) of a number of bacterial Mo-dependent nitrogenases. These are involved in nitrogen fixation in cyanobacteria. Note that many family members are hypothetical proteins.


:

Pssm-ID: 429218  Cd Length: 78  Bit Score: 171.49  E-value: 4.38e-57
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 505030401   45 IRPLRNWLDDLKVSDRQIAHRLCKYIPAQCPFERDVKLFGKVLFHIPPMCKLNPVYEEVVGLRFRAMCYLADECGEDI 122
Cdd:pfam06967   1 LQPLRQWLDSIEIRDPKLAHLLCKLIPAQCPFERDIKLFGRTLFHIPPLCKLNPLYEQLVGLRFRALCYLADECGEDI 78
 
Name Accession Description Interval E-value
Mo-nitro_C pfam06967
Mo-dependent nitrogenase C-terminus; This family represents the C-terminus (approximately 80 ...
 45-122 4.38e-57

Mo-dependent nitrogenase C-terminus; This family represents the C-terminus (approximately 80 residues) of a number of bacterial Mo-dependent nitrogenases. These are involved in nitrogen fixation in cyanobacteria. Note that many family members are hypothetical proteins.


Pssm-ID: 429218  Cd Length: 78  Bit Score: 171.49  E-value: 4.38e-57
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 505030401   45 IRPLRNWLDDLKVSDRQIAHRLCKYIPAQCPFERDVKLFGKVLFHIPPMCKLNPVYEEVVGLRFRAMCYLADECGEDI 122
Cdd:pfam06967   1 LQPLRQWLDSIEIRDPKLAHLLCKLIPAQCPFERDIKLFGRTLFHIPPLCKLNPLYEQLVGLRFRALCYLADECGEDI 78
 
Name Accession Description Interval E-value
Mo-nitro_C pfam06967
Mo-dependent nitrogenase C-terminus; This family represents the C-terminus (approximately 80 ...
 45-122 4.38e-57

Mo-dependent nitrogenase C-terminus; This family represents the C-terminus (approximately 80 residues) of a number of bacterial Mo-dependent nitrogenases. These are involved in nitrogen fixation in cyanobacteria. Note that many family members are hypothetical proteins.


Pssm-ID: 429218  Cd Length: 78  Bit Score: 171.49  E-value: 4.38e-57
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 505030401   45 IRPLRNWLDDLKVSDRQIAHRLCKYIPAQCPFERDVKLFGKVLFHIPPMCKLNPVYEEVVGLRFRAMCYLADECGEDI 122
Cdd:pfam06967   1 LQPLRQWLDSIEIRDPKLAHLLCKLIPAQCPFERDIKLFGRTLFHIPPLCKLNPLYEQLVGLRFRALCYLADECGEDI 78
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH