View
Concise Results
Standard Results
Full Results
MULTISPECIES: peptidoglycan DD-transpeptidase MrdA [Enterobacter]
Protein Classification
penicillin-binding protein 2 ( domain architecture ID 11484953 )
penicillin-binding protein (PBP) 2 is a membrane-associated enzyme that is involved in the synthesis of cross-linked peptidoglycan
List of domain hits
Name
Accession
Description
Interval
E-value
PRK10795
PRK10795 penicillin-binding protein 2; Provisional
1-620
0e+00
penicillin-binding protein 2; Provisional
Pssm-ID: 236761 [Multi-domain]
Cd Length: 634
Bit Score: 1384.48
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 1 M KLQNSFRDYTAESALFVRRALVAF T GILLLTGVLIANLYNLQIVRFTDYQTRSNENRIKLVPIAPSRGIIYDRNGTPLA 80
Cdd:PRK10795 2 K KLQNSFRDYTAESALFVRRALVAF L GILLLTGVLIANLYNLQIVRFTDYQTRSNENRIKLVPIAPSRGIIYDRNGTPLA 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 81 LNRTIYQ I EMMPEKVDN V Q D TL E ALRSVVDL N DDDIAAF K KERARS H RFTSIPVKTNLTEVQVARFAVNQYRFPGVEVKG 160
Cdd:PRK10795 82 LNRTIYQ L EMMPEKVDN L Q Q TL D ALRSVVDL T DDDIAAF R KERARS R RFTSIPVKTNLTEVQVARFAVNQYRFPGVEVKG 161
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 161 Y K RRYYPYGSALTHVIGYVSKINDKDV D RLDK D GKLANYAATHDIGKLGIERYYEDVLHG Q TGYEEVEVNNRGRVIRQL K 240
Cdd:PRK10795 162 Y Q RRYYPYGSALTHVIGYVSKINDKDV E RLDK E GKLANYAATHDIGKLGIERYYEDVLHG K TGYEEVEVNNRGRVIRQL H 241
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 241 E V PPQAGHD V YLTLDLKLQQYIETLLAGSRAAVVVTDPRTGGILA M VS M PSYDPNLFVDGISSKDYSGLLNDPN T PL V NR 320
Cdd:PRK10795 242 E Q PPQAGHD I YLTLDLKLQQYIETLLAGSRAAVVVTDPRTGGILA L VS T PSYDPNLFVDGISSKDYSGLLNDPN R PL I NR 321
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 321 ATQGVYPPASTVKPYVAVSALSAGVI N RNTSLFDPGWWQLPGSEKRYRDWKKWGHG H LNVTKSLEESADTFFYQVAYDMG 400
Cdd:PRK10795 322 ATQGVYPPASTVKPYVAVSALSAGVI T RNTSLFDPGWWQLPGSEKRYRDWKKWGHG R LNVTKSLEESADTFFYQVAYDMG 401
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 401 IDRLSEWM S KFGYGHYTG V DL S EERSGNMPTREWK L KRFKKPWYQGDTIPVGIGQGYWTATPIQM N KA M M I LINDG V VKV 480
Cdd:PRK10795 402 IDRLSEWM G KFGYGHYTG I DL A EERSGNMPTREWK Q KRFKKPWYQGDTIPVGIGQGYWTATPIQM S KA L M T LINDG I VKV 481
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 481 PHLL Q ST V EDGK K VPWVQPHE A PVGDIHSG F WEIAKDGMYGVANRPNGTAHKYFA GT PYK V AAKSGTAQVFGLKANETYN 560
Cdd:PRK10795 482 PHLL M ST A EDGK Q VPWVQPHE P PVGDIHSG Y WEIAKDGMYGVANRPNGTAHKYFA SA PYK I AAKSGTAQVFGLKANETYN 561
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 561 AH R IAERLRDHKLMTAFAPY D NPQVAVA M ILENGGAGPAVGTIMRQILDHIMLGDNNT E L 620
Cdd:PRK10795 562 AH K IAERLRDHKLMTAFAPY N NPQVAVA I ILENGGAGPAVGTIMRQILDHIMLGDNNT D L 621
Name
Accession
Description
Interval
E-value
PRK10795
PRK10795 penicillin-binding protein 2; Provisional
1-620
0e+00
penicillin-binding protein 2; Provisional
Pssm-ID: 236761 [Multi-domain]
Cd Length: 634
Bit Score: 1384.48
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 1 M KLQNSFRDYTAESALFVRRALVAF T GILLLTGVLIANLYNLQIVRFTDYQTRSNENRIKLVPIAPSRGIIYDRNGTPLA 80
Cdd:PRK10795 2 K KLQNSFRDYTAESALFVRRALVAF L GILLLTGVLIANLYNLQIVRFTDYQTRSNENRIKLVPIAPSRGIIYDRNGTPLA 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 81 LNRTIYQ I EMMPEKVDN V Q D TL E ALRSVVDL N DDDIAAF K KERARS H RFTSIPVKTNLTEVQVARFAVNQYRFPGVEVKG 160
Cdd:PRK10795 82 LNRTIYQ L EMMPEKVDN L Q Q TL D ALRSVVDL T DDDIAAF R KERARS R RFTSIPVKTNLTEVQVARFAVNQYRFPGVEVKG 161
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 161 Y K RRYYPYGSALTHVIGYVSKINDKDV D RLDK D GKLANYAATHDIGKLGIERYYEDVLHG Q TGYEEVEVNNRGRVIRQL K 240
Cdd:PRK10795 162 Y Q RRYYPYGSALTHVIGYVSKINDKDV E RLDK E GKLANYAATHDIGKLGIERYYEDVLHG K TGYEEVEVNNRGRVIRQL H 241
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 241 E V PPQAGHD V YLTLDLKLQQYIETLLAGSRAAVVVTDPRTGGILA M VS M PSYDPNLFVDGISSKDYSGLLNDPN T PL V NR 320
Cdd:PRK10795 242 E Q PPQAGHD I YLTLDLKLQQYIETLLAGSRAAVVVTDPRTGGILA L VS T PSYDPNLFVDGISSKDYSGLLNDPN R PL I NR 321
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 321 ATQGVYPPASTVKPYVAVSALSAGVI N RNTSLFDPGWWQLPGSEKRYRDWKKWGHG H LNVTKSLEESADTFFYQVAYDMG 400
Cdd:PRK10795 322 ATQGVYPPASTVKPYVAVSALSAGVI T RNTSLFDPGWWQLPGSEKRYRDWKKWGHG R LNVTKSLEESADTFFYQVAYDMG 401
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 401 IDRLSEWM S KFGYGHYTG V DL S EERSGNMPTREWK L KRFKKPWYQGDTIPVGIGQGYWTATPIQM N KA M M I LINDG V VKV 480
Cdd:PRK10795 402 IDRLSEWM G KFGYGHYTG I DL A EERSGNMPTREWK Q KRFKKPWYQGDTIPVGIGQGYWTATPIQM S KA L M T LINDG I VKV 481
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 481 PHLL Q ST V EDGK K VPWVQPHE A PVGDIHSG F WEIAKDGMYGVANRPNGTAHKYFA GT PYK V AAKSGTAQVFGLKANETYN 560
Cdd:PRK10795 482 PHLL M ST A EDGK Q VPWVQPHE P PVGDIHSG Y WEIAKDGMYGVANRPNGTAHKYFA SA PYK I AAKSGTAQVFGLKANETYN 561
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 561 AH R IAERLRDHKLMTAFAPY D NPQVAVA M ILENGGAGPAVGTIMRQILDHIMLGDNNT E L 620
Cdd:PRK10795 562 AH K IAERLRDHKLMTAFAPY N NPQVAVA I ILENGGAGPAVGTIMRQILDHIMLGDNNT D L 621
pbp2_mrdA
TIGR03423 penicillin-binding protein 2; Members of this protein family are penicillin-binding protein 2 ...
19-614
0e+00
penicillin-binding protein 2; Members of this protein family are penicillin-binding protein 2 (PBP-2), a protein whose gene (designated pbpA or mrdA) generally is found next to the gene for RodA, a protein required for rod (bacillus) shape in many bacteria. PBP-2 acts as a transpeptidase for cell elongation (hence, rod-shape). [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
Pssm-ID: 274573 [Multi-domain]
Cd Length: 592
Bit Score: 960.83
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 19 RRALV AFTGI L L L T GVL I A N L YN LQ IV R FTD Y Q T R S NE NRI K LVPI A P S RG I I Y DRNG TP LA L NR TIYQI E MM PEKVD NV 98
Cdd:TIGR03423 1 RRALV LGGLV L A L F GVL A A R L FY LQ VI R GEE Y A T L S ED NRI R LVPI P P P RG L I L DRNG VL LA D NR PSFSL E IV PEKVD DL 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 99 QD TL EA L RSVV DL NDD DIA A F K KE RA RS H RF TS IP V K TN LTE VQ VARFAVNQYR F PGVE VKGYKR RYYPYG SALT HV I GY 178
Cdd:TIGR03423 81 DA TL DR L AKLL DL DPE DIA R F L KE LK RS R RF EP IP L K SD LTE EE VARFAVNQYR L PGVE IEARLK RYYPYG ELAA HV L GY 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 179 V SK IN DK D VD RL D kdgk L ANYA ATHD IGK L GIE R YYED V L H G QT GY E EVEVN N RGRVIR Q L KE VPP QA G H D VY LT L D LK L 258
Cdd:TIGR03423 161 V GE IN EE D LE RL E ---- P ANYA GGDY IGK S GIE K YYED E L R G KP GY R EVEVN A RGRVIR T L SR VPP VP G K D LV LT I D AR L 236
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 259 QQ YI E TL L A G S R A AVVV T DPRTG G ILAMVS M PS Y DPNLFVDGISSKDY SG LLNDP NT PL V NRA T QGVYPP A ST V KP Y VA V 338
Cdd:TIGR03423 237 QQ AA E KA L G G R R G AVVV M DPRTG E ILAMVS T PS F DPNLFVDGISSKDY KA LLNDP DR PL L NRA I QGVYPP G ST F KP V VA L 316
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 339 S AL SA GVI NRN T SLFD PG WW QL P G se K R Y R D WK KW GHG HLNVT K SL EES A D TF FYQ V A YDM GID RLS E WMSK FG Y G HY TG 418
Cdd:TIGR03423 317 A AL EE GVI TPE T RIYC PG YF QL G G -- R R F R C WK RG GHG RVDLR K AI EES C D VY FYQ L A LRL GID KIA E YAKR FG F G QK TG 394
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 419 V DL SE E R SG NM P T REWK L KRF KK PWY Q GDT IP V G IGQGY WTA TP I Q MNK A MMI L I N D G VVKV PHL LQ S TVE - DG KK V PWV 497
Cdd:TIGR03423 395 I DL PG E K SG LV P S REWK R KRF GQ PWY P GDT LN V S IGQGY VLV TP L Q LAV A TAA L A N G G KLYK PHL VK S IED p DG GV V RRT 474
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 498 Q P HEAPVGD I HSGFWEIAKD GM YG V A N R P N GTA HKYFA G T PYK V A A K S GTAQV FG LK AN E T Y N A HR I A ERLRDH K L MT AF 577
Cdd:TIGR03423 475 E P EVLRPLP I SPENLDVVRE GM RD V V N G P G GTA RRARL G L PYK M A G K T GTAQV VS LK QG E K Y D A EQ I P ERLRDH A L FV AF 554
570 580 590
....*....|....*....|....*....|....*...
gi 504695892 578 APYDNP QV AVA M I L E N GG A G PAV - GT I M R Q I L D HIM LG 614
Cdd:TIGR03423 555 APYDNP KI AVA V I V E H GG G G SSA a AP I A R K I M D AYL LG 592
FtsI
COG0768 Cell division protein FtsI, peptidoglycan transpeptidase (Penicillin-binding protein 2) [Cell ...
11-610
0e+00
Cell division protein FtsI, peptidoglycan transpeptidase (Penicillin-binding protein 2) [Cell cycle control, cell division, chromosome partitioning, Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440531 [Multi-domain]
Cd Length: 568
Bit Score: 640.33
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 11 TA E SA LF V RR A L VA F TGI LLL TGV L IAN L YN LQ I V RFTD Y QTRSN ENRI KL VPI APS RG I IYDRNG TP LA L N RTI Y QIEM 90
Cdd:COG0768 4 KK E KR LF R RR L L LL F LLV LLL FLL L VGR L FY LQ V V EGDE Y AELAE ENRI RT VPI PAP RG L IYDRNG NV LA T N VPV Y SLYA 83
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 91 M PE K V DNVQD T L E A L RSVVD L NDDDIAAFK K ERA R S hrft SIPV K T NL TEVQV AR fa VNQYRF PGV E V KGYKR RYYPYG S 170
Cdd:COG0768 84 D PE E V KDPEE T A E K L AKLLG L DPEELRKKL K KKS R F ---- PVYL K R NL SPEEA AR -- IRALKL PGV Y V EAEYK RYYPYG E 157
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 171 ALT HV I GYV SK IN DK D vdrldkdgklanyaath D IGK L G I E RY YED V L H G QT G YEE VEV NN RGRVIR Q L - K E V PP QA G H D 249
Cdd:COG0768 158 LAA HV L GYV GE IN GG D ----------------- G IGK S G L E KA YED L L R G TP G KRR VEV DA RGRVIR D L g E E K PP VP G K D 220
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 250 VY LT L D LK LQ QYI E TL L AGS ------- RA AVVV T DP R TG G ILAM V S M PS Y DPNLFV D G isskdysgllnd P NT PL V NRA T 322
Cdd:COG0768 221 LV LT I D SD LQ KIA E EA L KKA veeykak SG AVVV M DP K TG E ILAM A S Y PS F DPNLFV G G ------------ P DE PL R NRA V 288
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 323 QG V Y P P A ST V KP YV A VS AL SA GVI NRN T SLFD PG WWQLP G se KRY RDW KKW GHG H L NV T KS L EE S ADTF FY QV A YDM GID 402
Cdd:COG0768 289 QG T Y E P G ST F KP FT A AA AL EE GVI TPD T TFDC PG YYRVG G -- RTI RDW DRG GHG T L TL T EA L AK S SNVG FY KL A LRL GID 366
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 403 R L SEWMS KFG Y G HY TG V DL SE E R SG NM P TR ewklkrfk K P WY Q G D T IPVG IGQG y WTA TP I Q MNK A MMILI N D GV VKV PH 482
Cdd:COG0768 367 K L YDYLK KFG L G QK TG I DL PG E A SG LL P SP -------- K R WY P G E T ATMS IGQG - LSV TP L Q LAQ A YAAIA N G GV LVK PH 437
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 483 L LQST V EDGKK V PWVQ P HEA - P V gd I HSGFW E IAKD GM Y GV A N R P N GTA HKY f A GTP Y K VA A K S GTAQV FGLKANET Y NA 561
Cdd:COG0768 438 L VKEI V DPDGE V VKEE P EVL r R V -- I SPETA E TVRE GM E GV V N E P G GTA RRA - A IPG Y R VA G K T GTAQV VDIGNGGY Y KG 514
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*..
gi 504695892 562 HR IA erlrdhk LMTA FAP Y DNP QV AVA MIL EN G G -------- A G P AVGT IM RQI L DH 610
Cdd:COG0768 515 RH IA ------- SFVG FAP A DNP RY AVA VVV EN P G ggayggtv A A P VFRE IM EAY L RL 564
Transpeptidase
pfam00905 Penicillin binding protein transpeptidase domain; The active site serine (residue 337 in Swiss: ...
271-609
5.93e-86
Penicillin binding protein transpeptidase domain; The active site serine (residue 337 in Swiss:P14677) is conserved in all members of this family.
Pssm-ID: 425939 [Multi-domain]
Cd Length: 296
Bit Score: 270.44
E-value: 5.93e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 271 AAV VV T DP R TG GI LAMV SM PSYDPN L F vdgisskdysgllndp NT PL V NRA TQGV Y P P A ST V KP YV A VS AL SA GV INRNT 350
Cdd:pfam00905 1 GSA VV L DP K TG EV LAMV GK PSYDPN G F ---------------- IG PL R NRA VTSR Y E P G ST F KP FT A LA AL DN GV LKPDE 64
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 351 SL FD PGWW Q LP G se K RYR DW KKWGH G HLNVTKS LE E S ADTFFYQV A YDM G I D R L SEWMS KFGYG HY TG VD L SE E RS G NMP 430
Cdd:pfam00905 65 TI FD WPGK Q QG G -- K SIG DW NQDQV G IGTLRQA LE Y S SNWYMQKL A QKL G A D K L RSYLK KFGYG NK TG IG L PG E NA G YLT 142
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 431 TR ewklkrfkkp W YQ G D T IPV GIG qgy W T A TP I Q MNK A MMILI N D G VVKV PHL LQ S TVE dgkkvp W V Q P HEAPVGD I HSG 510
Cdd:pfam00905 143 PY ---------- W LE G A T ASF GIG --- L T I TP L Q QAQ A YAAIA N G G KLVP PHL VK S IED ------ K V D P KVLNKLP I SKS 203
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 511 FW E IA KD GMYG V A N RPN GT AHKYFA G tp YKVA A K S GTAQV F G L K ANET Y NAH riaerlr DHKLMTAF AP Y DNP QV A V A MI 590
Cdd:pfam00905 204 TA E KV KD MLRL V V N DGT GT GTAAVP G -- YKVA G K T GTAQV A G P K GGGY Y DGA ------- QIGWFVGY AP A DNP KY A F A VL 274
330 340
....*....|....*....|..
gi 504695892 591 LENGGA --- G PAVGT I MRQ IL D 609
Cdd:pfam00905 275 IDDPKR yyg G KVAAP I FKD IL E 296
Name
Accession
Description
Interval
E-value
PRK10795
PRK10795 penicillin-binding protein 2; Provisional
1-620
0e+00
penicillin-binding protein 2; Provisional
Pssm-ID: 236761 [Multi-domain]
Cd Length: 634
Bit Score: 1384.48
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 1 M KLQNSFRDYTAESALFVRRALVAF T GILLLTGVLIANLYNLQIVRFTDYQTRSNENRIKLVPIAPSRGIIYDRNGTPLA 80
Cdd:PRK10795 2 K KLQNSFRDYTAESALFVRRALVAF L GILLLTGVLIANLYNLQIVRFTDYQTRSNENRIKLVPIAPSRGIIYDRNGTPLA 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 81 LNRTIYQ I EMMPEKVDN V Q D TL E ALRSVVDL N DDDIAAF K KERARS H RFTSIPVKTNLTEVQVARFAVNQYRFPGVEVKG 160
Cdd:PRK10795 82 LNRTIYQ L EMMPEKVDN L Q Q TL D ALRSVVDL T DDDIAAF R KERARS R RFTSIPVKTNLTEVQVARFAVNQYRFPGVEVKG 161
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 161 Y K RRYYPYGSALTHVIGYVSKINDKDV D RLDK D GKLANYAATHDIGKLGIERYYEDVLHG Q TGYEEVEVNNRGRVIRQL K 240
Cdd:PRK10795 162 Y Q RRYYPYGSALTHVIGYVSKINDKDV E RLDK E GKLANYAATHDIGKLGIERYYEDVLHG K TGYEEVEVNNRGRVIRQL H 241
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 241 E V PPQAGHD V YLTLDLKLQQYIETLLAGSRAAVVVTDPRTGGILA M VS M PSYDPNLFVDGISSKDYSGLLNDPN T PL V NR 320
Cdd:PRK10795 242 E Q PPQAGHD I YLTLDLKLQQYIETLLAGSRAAVVVTDPRTGGILA L VS T PSYDPNLFVDGISSKDYSGLLNDPN R PL I NR 321
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 321 ATQGVYPPASTVKPYVAVSALSAGVI N RNTSLFDPGWWQLPGSEKRYRDWKKWGHG H LNVTKSLEESADTFFYQVAYDMG 400
Cdd:PRK10795 322 ATQGVYPPASTVKPYVAVSALSAGVI T RNTSLFDPGWWQLPGSEKRYRDWKKWGHG R LNVTKSLEESADTFFYQVAYDMG 401
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 401 IDRLSEWM S KFGYGHYTG V DL S EERSGNMPTREWK L KRFKKPWYQGDTIPVGIGQGYWTATPIQM N KA M M I LINDG V VKV 480
Cdd:PRK10795 402 IDRLSEWM G KFGYGHYTG I DL A EERSGNMPTREWK Q KRFKKPWYQGDTIPVGIGQGYWTATPIQM S KA L M T LINDG I VKV 481
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 481 PHLL Q ST V EDGK K VPWVQPHE A PVGDIHSG F WEIAKDGMYGVANRPNGTAHKYFA GT PYK V AAKSGTAQVFGLKANETYN 560
Cdd:PRK10795 482 PHLL M ST A EDGK Q VPWVQPHE P PVGDIHSG Y WEIAKDGMYGVANRPNGTAHKYFA SA PYK I AAKSGTAQVFGLKANETYN 561
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 561 AH R IAERLRDHKLMTAFAPY D NPQVAVA M ILENGGAGPAVGTIMRQILDHIMLGDNNT E L 620
Cdd:PRK10795 562 AH K IAERLRDHKLMTAFAPY N NPQVAVA I ILENGGAGPAVGTIMRQILDHIMLGDNNT D L 621
pbp2_mrdA
TIGR03423 penicillin-binding protein 2; Members of this protein family are penicillin-binding protein 2 ...
19-614
0e+00
penicillin-binding protein 2; Members of this protein family are penicillin-binding protein 2 (PBP-2), a protein whose gene (designated pbpA or mrdA) generally is found next to the gene for RodA, a protein required for rod (bacillus) shape in many bacteria. PBP-2 acts as a transpeptidase for cell elongation (hence, rod-shape). [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
Pssm-ID: 274573 [Multi-domain]
Cd Length: 592
Bit Score: 960.83
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 19 RRALV AFTGI L L L T GVL I A N L YN LQ IV R FTD Y Q T R S NE NRI K LVPI A P S RG I I Y DRNG TP LA L NR TIYQI E MM PEKVD NV 98
Cdd:TIGR03423 1 RRALV LGGLV L A L F GVL A A R L FY LQ VI R GEE Y A T L S ED NRI R LVPI P P P RG L I L DRNG VL LA D NR PSFSL E IV PEKVD DL 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 99 QD TL EA L RSVV DL NDD DIA A F K KE RA RS H RF TS IP V K TN LTE VQ VARFAVNQYR F PGVE VKGYKR RYYPYG SALT HV I GY 178
Cdd:TIGR03423 81 DA TL DR L AKLL DL DPE DIA R F L KE LK RS R RF EP IP L K SD LTE EE VARFAVNQYR L PGVE IEARLK RYYPYG ELAA HV L GY 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 179 V SK IN DK D VD RL D kdgk L ANYA ATHD IGK L GIE R YYED V L H G QT GY E EVEVN N RGRVIR Q L KE VPP QA G H D VY LT L D LK L 258
Cdd:TIGR03423 161 V GE IN EE D LE RL E ---- P ANYA GGDY IGK S GIE K YYED E L R G KP GY R EVEVN A RGRVIR T L SR VPP VP G K D LV LT I D AR L 236
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 259 QQ YI E TL L A G S R A AVVV T DPRTG G ILAMVS M PS Y DPNLFVDGISSKDY SG LLNDP NT PL V NRA T QGVYPP A ST V KP Y VA V 338
Cdd:TIGR03423 237 QQ AA E KA L G G R R G AVVV M DPRTG E ILAMVS T PS F DPNLFVDGISSKDY KA LLNDP DR PL L NRA I QGVYPP G ST F KP V VA L 316
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 339 S AL SA GVI NRN T SLFD PG WW QL P G se K R Y R D WK KW GHG HLNVT K SL EES A D TF FYQ V A YDM GID RLS E WMSK FG Y G HY TG 418
Cdd:TIGR03423 317 A AL EE GVI TPE T RIYC PG YF QL G G -- R R F R C WK RG GHG RVDLR K AI EES C D VY FYQ L A LRL GID KIA E YAKR FG F G QK TG 394
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 419 V DL SE E R SG NM P T REWK L KRF KK PWY Q GDT IP V G IGQGY WTA TP I Q MNK A MMI L I N D G VVKV PHL LQ S TVE - DG KK V PWV 497
Cdd:TIGR03423 395 I DL PG E K SG LV P S REWK R KRF GQ PWY P GDT LN V S IGQGY VLV TP L Q LAV A TAA L A N G G KLYK PHL VK S IED p DG GV V RRT 474
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 498 Q P HEAPVGD I HSGFWEIAKD GM YG V A N R P N GTA HKYFA G T PYK V A A K S GTAQV FG LK AN E T Y N A HR I A ERLRDH K L MT AF 577
Cdd:TIGR03423 475 E P EVLRPLP I SPENLDVVRE GM RD V V N G P G GTA RRARL G L PYK M A G K T GTAQV VS LK QG E K Y D A EQ I P ERLRDH A L FV AF 554
570 580 590
....*....|....*....|....*....|....*...
gi 504695892 578 APYDNP QV AVA M I L E N GG A G PAV - GT I M R Q I L D HIM LG 614
Cdd:TIGR03423 555 APYDNP KI AVA V I V E H GG G G SSA a AP I A R K I M D AYL LG 592
FtsI
COG0768 Cell division protein FtsI, peptidoglycan transpeptidase (Penicillin-binding protein 2) [Cell ...
11-610
0e+00
Cell division protein FtsI, peptidoglycan transpeptidase (Penicillin-binding protein 2) [Cell cycle control, cell division, chromosome partitioning, Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440531 [Multi-domain]
Cd Length: 568
Bit Score: 640.33
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 11 TA E SA LF V RR A L VA F TGI LLL TGV L IAN L YN LQ I V RFTD Y QTRSN ENRI KL VPI APS RG I IYDRNG TP LA L N RTI Y QIEM 90
Cdd:COG0768 4 KK E KR LF R RR L L LL F LLV LLL FLL L VGR L FY LQ V V EGDE Y AELAE ENRI RT VPI PAP RG L IYDRNG NV LA T N VPV Y SLYA 83
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 91 M PE K V DNVQD T L E A L RSVVD L NDDDIAAFK K ERA R S hrft SIPV K T NL TEVQV AR fa VNQYRF PGV E V KGYKR RYYPYG S 170
Cdd:COG0768 84 D PE E V KDPEE T A E K L AKLLG L DPEELRKKL K KKS R F ---- PVYL K R NL SPEEA AR -- IRALKL PGV Y V EAEYK RYYPYG E 157
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 171 ALT HV I GYV SK IN DK D vdrldkdgklanyaath D IGK L G I E RY YED V L H G QT G YEE VEV NN RGRVIR Q L - K E V PP QA G H D 249
Cdd:COG0768 158 LAA HV L GYV GE IN GG D ----------------- G IGK S G L E KA YED L L R G TP G KRR VEV DA RGRVIR D L g E E K PP VP G K D 220
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 250 VY LT L D LK LQ QYI E TL L AGS ------- RA AVVV T DP R TG G ILAM V S M PS Y DPNLFV D G isskdysgllnd P NT PL V NRA T 322
Cdd:COG0768 221 LV LT I D SD LQ KIA E EA L KKA veeykak SG AVVV M DP K TG E ILAM A S Y PS F DPNLFV G G ------------ P DE PL R NRA V 288
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 323 QG V Y P P A ST V KP YV A VS AL SA GVI NRN T SLFD PG WWQLP G se KRY RDW KKW GHG H L NV T KS L EE S ADTF FY QV A YDM GID 402
Cdd:COG0768 289 QG T Y E P G ST F KP FT A AA AL EE GVI TPD T TFDC PG YYRVG G -- RTI RDW DRG GHG T L TL T EA L AK S SNVG FY KL A LRL GID 366
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 403 R L SEWMS KFG Y G HY TG V DL SE E R SG NM P TR ewklkrfk K P WY Q G D T IPVG IGQG y WTA TP I Q MNK A MMILI N D GV VKV PH 482
Cdd:COG0768 367 K L YDYLK KFG L G QK TG I DL PG E A SG LL P SP -------- K R WY P G E T ATMS IGQG - LSV TP L Q LAQ A YAAIA N G GV LVK PH 437
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 483 L LQST V EDGKK V PWVQ P HEA - P V gd I HSGFW E IAKD GM Y GV A N R P N GTA HKY f A GTP Y K VA A K S GTAQV FGLKANET Y NA 561
Cdd:COG0768 438 L VKEI V DPDGE V VKEE P EVL r R V -- I SPETA E TVRE GM E GV V N E P G GTA RRA - A IPG Y R VA G K T GTAQV VDIGNGGY Y KG 514
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*..
gi 504695892 562 HR IA erlrdhk LMTA FAP Y DNP QV AVA MIL EN G G -------- A G P AVGT IM RQI L DH 610
Cdd:COG0768 515 RH IA ------- SFVG FAP A DNP RY AVA VVV EN P G ggayggtv A A P VFRE IM EAY L RL 564
Transpeptidase
pfam00905 Penicillin binding protein transpeptidase domain; The active site serine (residue 337 in Swiss: ...
271-609
5.93e-86
Penicillin binding protein transpeptidase domain; The active site serine (residue 337 in Swiss:P14677) is conserved in all members of this family.
Pssm-ID: 425939 [Multi-domain]
Cd Length: 296
Bit Score: 270.44
E-value: 5.93e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 271 AAV VV T DP R TG GI LAMV SM PSYDPN L F vdgisskdysgllndp NT PL V NRA TQGV Y P P A ST V KP YV A VS AL SA GV INRNT 350
Cdd:pfam00905 1 GSA VV L DP K TG EV LAMV GK PSYDPN G F ---------------- IG PL R NRA VTSR Y E P G ST F KP FT A LA AL DN GV LKPDE 64
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 351 SL FD PGWW Q LP G se K RYR DW KKWGH G HLNVTKS LE E S ADTFFYQV A YDM G I D R L SEWMS KFGYG HY TG VD L SE E RS G NMP 430
Cdd:pfam00905 65 TI FD WPGK Q QG G -- K SIG DW NQDQV G IGTLRQA LE Y S SNWYMQKL A QKL G A D K L RSYLK KFGYG NK TG IG L PG E NA G YLT 142
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 431 TR ewklkrfkkp W YQ G D T IPV GIG qgy W T A TP I Q MNK A MMILI N D G VVKV PHL LQ S TVE dgkkvp W V Q P HEAPVGD I HSG 510
Cdd:pfam00905 143 PY ---------- W LE G A T ASF GIG --- L T I TP L Q QAQ A YAAIA N G G KLVP PHL VK S IED ------ K V D P KVLNKLP I SKS 203
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 511 FW E IA KD GMYG V A N RPN GT AHKYFA G tp YKVA A K S GTAQV F G L K ANET Y NAH riaerlr DHKLMTAF AP Y DNP QV A V A MI 590
Cdd:pfam00905 204 TA E KV KD MLRL V V N DGT GT GTAAVP G -- YKVA G K T GTAQV A G P K GGGY Y DGA ------- QIGWFVGY AP A DNP KY A F A VL 274
330 340
....*....|....*....|..
gi 504695892 591 LENGGA --- G PAVGT I MRQ IL D 609
Cdd:pfam00905 275 IDDPKR yyg G KVAAP I FKD IL E 296
PBP_dimer
pfam03717 Penicillin-binding Protein dimerization domain; This domain is found at the N terminus of ...
63-238
2.69e-52
Penicillin-binding Protein dimerization domain; This domain is found at the N terminus of Class B High Molecular Weight Penicillin-Binding Proteins. Its function has not been precisely defined, but is strongly implicated in PBP polymerization. The domain forms a largely disordered 'sugar tongs' structure.
Pssm-ID: 427460 [Multi-domain]
Cd Length: 178
Bit Score: 177.51
E-value: 2.69e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 63 PI APS RG I IYDRNG TP LA L N RTI Y QIEMM P E K VDNVQDTLE A ------ L RSVV DL N D D D IAAFKKERARSHRFTSIPV K T 136
Cdd:pfam03717 1 PI PAP RG E IYDRNG VV LA T N KPV Y SLTIT P S K LKKADALKT A lklakl L SNYE DL D D E D LTERFLKMNSYKSYYPVVI K K 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 137 NL T E VQ VAR FAV N QYRF PGV EVKGYKR RYYPYG SALT H VI GYV SK I NDKDVDRLDKD G klan Y AATHDI GK L G I E RY YE D 216
Cdd:pfam03717 81 NL S E EE VAR IEE N LLEL PGV SIETDPV RYYPYG ELAA H LL GYV GE I TEEELEKYLDK G ---- Y SRGDLV GK S G L E KQ YE S 156
170 180
....*....|....*....|..
gi 504695892 217 VL H G QT G YEE VEV NNR GRVIR Q 238
Cdd:pfam03717 157 VL R G KD G VRQ VEV DAL GRVIR E 178
PRK15105
PRK15105 peptidoglycan synthase FtsI; Provisional
13-608
3.98e-38
peptidoglycan synthase FtsI; Provisional
Pssm-ID: 185060 [Multi-domain]
Cd Length: 578
Bit Score: 149.20
E-value: 3.98e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 13 E S A L F V -- R R AL VAFTGI L L L TGV L IANLY n LQ IVR f T D YQT R SNEN R - IKLVPIAP SRG I I Y DR N G T PLA LNRTIYQ I E 89
Cdd:PRK15105 14 E Q A N F I sw R F AL LCGCIL L A L VFL L GRVAW - LQ VIN - P D MLV R EGDM R s LRVQEVST SRG M I T DR S G R PLA VSVPVKA I W 91
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 90 MM P EK V - D NVQDTLE ---- AL RSVVDLND D DIA A f KKERARSH RF TSIPVKT N lte VQV A RF a VNQYRF PG VEVKGYK RR 164
Cdd:PRK15105 92 AD P KE V h D AGGISVD drwk AL ADALNIPL D QLS A - RINANPKG RF IYLARQV N --- PDM A DY - IKKLKL PG IHLREES RR 166
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 165 YYP Y G SALT H V IG y VSKINDKDVD rldkdgklanyaathdigkl G I E RYYEDV L H GQ T G YEE V EVNNR GRVI RQLKEVPP 244
Cdd:PRK15105 167 YYP S G EVTA H L IG - FTNVDSQGIE -------------------- G V E KSFDKW L T GQ P G ERI V RKDRY GRVI EDISSTDS 225
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 245 QA G H DVY L TL D LK LQ QYIETL L -------- A G S RA AV V V t D PR TG GI LAM VSM PSY D PN lfvdgisskdys G L LND P NTP 316
Cdd:PRK15105 226 QA A H NLA L SI D ER LQ ALVYRE L nnavafnk A E S GS AV L V - D VN TG EV LAM ANS PSY N PN ------------ N L SGT P KDA 292
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 317 LV NRA TQG V YP P A STVKP Y V AVS AL SA GV INR N TS L f DPGWWQLP G S E ---- K RY RD wkkwghgh L NV T KS L EE S ADTFF 392
Cdd:PRK15105 293 MR NRA ITD V FE P G STVKP M V VMT AL QR GV VKE N SV L - NTVPYRIN G H E ikdv A RY SE -------- L TL T GV L QK S SNVGV 363
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 393 YQV A YD M GIDR L SEWM S K FG Y G HY T GVD L SE ERSG NM P T rewklkrf K KP W YQGDTIPVGI G Q G Y w TA TP I Q MNKAMMIL 472
Cdd:PRK15105 364 SKL A LA M PSSA L VDTY S R FG L G KA T NLG L VG ERSG LY P Q -------- K QR W SDIERATFSF G Y G L - MV TP L Q LARVYATI 434
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 473 IND G VVK v P hl L QS T VE D g KK VP W -- V Q P HEAPVGDI H S gfweiakdg M YG VA n R P N G TAH K Y f A GTP Y KV A A K S GTA QV 550
Cdd:PRK15105 435 GSY G IYR - P -- L SI T KV D - PP VP G er V F P ESIVRTVV H M --------- M ES VA - L P G G GGV K A - A IKG Y RI A I K T GTA KK 499
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 504695892 551 F G LKAN et Y NAHR IA erlrdhkl M TA - F AP YDN P QV A VAMILEN ------- GGA -- G P AV G T IM RQI L 608
Cdd:PRK15105 500 V G PDGR -- Y INKY IA -------- Y TA g V AP ASQ P RF A LVVVIND pqagkyy GGA vs A P VF G A IM GGV L 557
MrcB
COG0744 Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase [Cell wall ...
235-609
2.33e-21
Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440507 [Multi-domain]
Cd Length: 630
Bit Score: 98.45
E-value: 2.33e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 235 V I R Q L K E ----- VPPQA G HDV Y L TLD L KLQ QYI E TLLA --------- G SR AA V VV T DP R TG GI LAMV SMPS Y DPNL F vdg 300
Cdd:COG0744 277 V R R E L E E llged DLYRG G LKI Y T TLD P KLQ KAA E KAVK nvlpegkpg G LQ AA L VV V DP K TG EV LAMV GGRD Y GKSQ F --- 353
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 301 isskdysgllndpntplv NRATQ GVYP P A ST V KP Y V AVS AL SA G v INRN T SL ------ F DP G W W QLPGSEK RY rdwkkwg 374
Cdd:COG0744 354 ------------------ NRATQ AKRQ P G ST F KP F V YAA AL EQ G - YTPA T TV ddepvt F PG G G W SPKNYDG RY ------- 407
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 375 H G HLNVTKS L EE S AD T FFYQV A YDM G I D RLSEWMSKF G yghytgvdlseersgnmptrewklkr FKK P WYQGDTIPV G IG 454
Cdd:COG0744 408 R G PVTLREA L AN S LN T PAVRL A QEV G L D KVVDTARRL G -------------------------- ITS P LDPNPSLAL G TS 461
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 455 qgyw TAT P IQ M NK A MMILI N D GV VKV PH LLQS - T VE DGK KVPWVQ P HEAP V GDIHSGF we IAK D GMYG V ANR pn GT AHK - 532
Cdd:COG0744 462 ---- EVS P LE M AS A YATFA N G GV YVE PH AITK v T DA DGK VLYEAK P KCEQ V ISPEVAY -- LMT D MLQD V VTS -- GT GRA a 533
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 533 YFA G T P yk VA A K S GT AQVF glkanetynahriaerl RD hklm TA F AP Y D n PQ VAV A ---------- M ILEN GG AG PA -- V 600
Cdd:COG0744 534 RLP G R P -- VA G K T GT TNDN ----------------- RD ---- AW F VG Y T - PQ LVT A vwvgnddnsp M GYVT GG SL PA pi W 589
....*....
gi 504695892 601 GTI M RQI L D 609
Cdd:COG0744 590 RDF M EAA L E 598
PbpC
COG4953 Membrane carboxypeptidase/penicillin-binding protein PbpC [Cell wall/membrane/envelope ...
235-354
1.81e-04
Membrane carboxypeptidase/penicillin-binding protein PbpC [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443980 [Multi-domain]
Cd Length: 773
Bit Score: 44.82
E-value: 1.81e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695892 235 VI R Q L KEV P PQAGHD vy L TLD LK LQ QYI E T L LAG -- S R -------- AAV V V T D P RTG GI LA M V - S MPSY D PNLF -- VD GI 301
Cdd:COG4953 261 AR R L L RQL P GGTRIR -- T TLD AG LQ RRL E R L VRR yv R R lkqngihn AAV L V V D N RTG EV LA Y V g S ADFF D ASRQ gq VD MV 338
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 504695892 302 SSK dysgllndpntplvn R A tqgvyp P A ST V KP YVAVS AL SA G V I NRN T S L F D 354
Cdd:COG4953 339 RAL --------------- R S ------ P G ST L KP FLYGL AL DQ G L I HPE T L L A D 370
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
