|
Name |
Accession |
Description |
Interval |
E-value |
| flgA |
PRK12786 |
flagellar basal body P-ring formation protein FlgA; |
26-332 |
3.88e-134 |
|
flagellar basal body P-ring formation protein FlgA;
Pssm-ID: 237201 [Multi-domain] Cd Length: 338 Bit Score: 386.71 E-value: 3.88e-134
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504306901 26 IAAPTLRASVTVTSDVVRVGDLIDNAGSAALIPVYRSPDLGTTGALPVAHVLSVLRAKQVIGVMTGDIKEVQVTRLARTL 105
Cdd:PRK12786 26 AAAPVLRAAVTVTGDVVRLGDLFDNAGDAADIAIYRAPAPGTTGALPTAQLIAAARAHGVDWVDTSGIREVTVTRAARTV 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504306901 106 ANKDLETAVASALERRFGLGEAANIAVTFDRGVADMRLDASNTGALQPVATRYDVRNGRFDIAFEINNESNPAPTKLRFT 185
Cdd:PRK12786 106 DAEEIEEQVAQALERRNGLGEAADLSVTFDRDFQPLTLPASDSGAVTPVDVRFDPRSGRFDATFEIAPAGGAAPVRLRVT 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504306901 186 GTAIETVEVAVLTRDIDRADLLKSSDIALERRPKAEVTG-EPASRDRSIGMQLRRPMRAGMPIRVADIVKPDFVSRDQSV 264
Cdd:PRK12786 186 GTAYETVEAPVLARAVGRGEVIKSSDVVWERRPKARVSGdDIASREDLVGMQARRALRAGQPLRGADLAKPDLVQRGQLV 265
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 504306901 265 TVIYQVPGIYLTTRGKAIESGAEGDTVSVLNLQTKRTLTGVVTGRGQVTVQGASQSAPMAPAVEQTSS 332
Cdd:PRK12786 266 TLIYQTPGIYLTARGKALEDGAEGDVVRVLNLQSKRTVTGTVTGRGQVSVDPAAAALAAAAATANTPA 333
|
|
| ChapFlgA |
pfam13144 |
Chaperone for flagella basal body P-ring formation; ChapFlgA is a family similar to the SAF ... |
192-314 |
1.22e-35 |
|
Chaperone for flagella basal body P-ring formation; ChapFlgA is a family similar to the SAF family, and includes chaperones for flagellar basal-body proteins and pilus-assembly proteins, FlgA, RcpB and CpaB. ChapFlgA is necessary for the formation of the P-ring of the flagellum, FlgI, which sits in the peptidoglycan layer of the outer membrane of the bacterium. FlgA plays an auxiliary role in P-ring assembly.
Pssm-ID: 432991 [Multi-domain] Cd Length: 122 Bit Score: 126.50 E-value: 1.22e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504306901 192 VEVAVLTRDIDRADLLKSSDIALERRPKAEVTGEPAsRDRSIGMQLRRPMRAGMPIRVADIVKPDFVSRDQSVTVIYQVP 271
Cdd:pfam13144 1 VPVVVAARPLARGEVITASDLALKKRDLARLPGGYL-TDQAIGKRVKRSIRAGQPIRQNMLEAPPLVKKGQKVTIIARGG 79
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 504306901 272 GIYLTTRGKAIESGAEGDTVSVLNLQTKRTLTGVVTGRGQVTV 314
Cdd:pfam13144 80 GFRITTEGKALENGAEGDQIRVKNLQSGRIVTGRVTGPGTVEV 122
|
|
| flgA_cterm |
TIGR03170 |
flagella basal body P-ring formation protein FlgA; This model describes a conserved C-terminal ... |
194-314 |
3.31e-32 |
|
flagella basal body P-ring formation protein FlgA; This model describes a conserved C-terminal region of the flagellar basal body P-ring formation protein FlgA. This sequence region contains a SAF domain, now described by pfam08666. [Cellular processes, Chemotaxis and motility]
Pssm-ID: 274466 [Multi-domain] Cd Length: 122 Bit Score: 117.63 E-value: 3.31e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504306901 194 VAVLTRDIDRADLLKSSDIALERRPKAEVTGEPAS-RDRSIGMQLRRPMRAGMPIRVADIVKPDFVSRDQSVTVIYQVPG 272
Cdd:TIGR03170 1 VVVAKRPLKRGEVITPEDLKLERGDLARLPGGVLTdPDEVVGKVAKRPLRAGQPLTANMLRPPWLVKRGDTVTVIARGGG 80
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 504306901 273 IYLTTRGKAIESGAEGDTVSVLNLQTKRTLTGVVTGRGQVTV 314
Cdd:TIGR03170 81 LSITTEGKALEDGAVGDQIRVRNLSSGKIISGIVTAPGTVEV 122
|
|
| FlgA |
COG1261 |
Flagellar basal body P-ring formation protein FlgA [Cell motility]; |
178-315 |
1.18e-31 |
|
Flagellar basal body P-ring formation protein FlgA [Cell motility];
Pssm-ID: 440873 [Multi-domain] Cd Length: 158 Bit Score: 117.30 E-value: 1.18e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504306901 178 APTKLRFTGTAIETVEVAVLTRDIDRADLLKSSDIALERRPKAEVTGEP-ASRDRSIGMQLRRPMRAGMPIRVADIVKPD 256
Cdd:COG1261 19 KGWTVYVPARVAVYGEVVVAARPLARGEVITADDLRLEEGDLARLPGGAlTDPDELVGKVARRSLRAGQPLRASDLRAPP 98
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 504306901 257 FVSRDQSVTVIYQVPGIYLTTRGKAIESGAEGDTVSVLNLQTKRTLTGVVTGRGQVTVQ 315
Cdd:COG1261 99 LVKRGQTVTIVARGGGFSVSAEGRALENGALGDRIRVRNLSSGKVVSGRVVGDGTVEVG 157
|
|
| SAF |
smart00858 |
This domain family includes a range of different proteins. Such as antifreeze proteins and ... |
192-253 |
7.88e-07 |
|
This domain family includes a range of different proteins. Such as antifreeze proteins and flagellar FlgA proteins, and CpaB pilus proteins;
Pssm-ID: 214862 [Multi-domain] Cd Length: 63 Bit Score: 46.02 E-value: 7.88e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 504306901 192 VEVAVLTRDIDRADLLKSSDIALERRPKAEVTGEPASR-DRSIGMQLRRPMRAGMPIRVADIV 253
Cdd:smart00858 1 DNVVVAARDLPAGEVITAEDLRLGHVALRDLPGGGLTPyGQVIGRVARRDIAAGEPITASNLE 63
|
|
| SAF_CpaB_FlgA_like |
cd11614 |
SAF domains of the flagella basal body P-ring formation protein FlgA and the flp pilus ... |
193-252 |
2.24e-06 |
|
SAF domains of the flagella basal body P-ring formation protein FlgA and the flp pilus assembly CpaB; FlgA is a putative periplasmic chaperone that assists in the formation of the flagellar P ring; CpaB is a protein invoved in the assembly of the flp pili, which are bacterial virulence factors mediating non-specific adherence to surfaces; these proteins appear to contain a single SAF domain. This intermediate family also contains the SAF domains of sialic acid synthetases and type III antifreeze proteins, which also share the same extensive core structure.
Pssm-ID: 212159 [Multi-domain] Cd Length: 61 Bit Score: 44.38 E-value: 2.24e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 504306901 193 EVAVLTRDIDRADLLKSSDIALERRPKAEVTGEPASRDRS-IGMQLRRPMRAGMPIRVADI 252
Cdd:cd11614 1 PVVVAARDLPAGTVITADDLTLVEVPLSLLPPGALTDPDDvVGRVARRPLRAGEPITASML 61
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| flgA |
PRK12786 |
flagellar basal body P-ring formation protein FlgA; |
26-332 |
3.88e-134 |
|
flagellar basal body P-ring formation protein FlgA;
Pssm-ID: 237201 [Multi-domain] Cd Length: 338 Bit Score: 386.71 E-value: 3.88e-134
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504306901 26 IAAPTLRASVTVTSDVVRVGDLIDNAGSAALIPVYRSPDLGTTGALPVAHVLSVLRAKQVIGVMTGDIKEVQVTRLARTL 105
Cdd:PRK12786 26 AAAPVLRAAVTVTGDVVRLGDLFDNAGDAADIAIYRAPAPGTTGALPTAQLIAAARAHGVDWVDTSGIREVTVTRAARTV 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504306901 106 ANKDLETAVASALERRFGLGEAANIAVTFDRGVADMRLDASNTGALQPVATRYDVRNGRFDIAFEINNESNPAPTKLRFT 185
Cdd:PRK12786 106 DAEEIEEQVAQALERRNGLGEAADLSVTFDRDFQPLTLPASDSGAVTPVDVRFDPRSGRFDATFEIAPAGGAAPVRLRVT 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504306901 186 GTAIETVEVAVLTRDIDRADLLKSSDIALERRPKAEVTG-EPASRDRSIGMQLRRPMRAGMPIRVADIVKPDFVSRDQSV 264
Cdd:PRK12786 186 GTAYETVEAPVLARAVGRGEVIKSSDVVWERRPKARVSGdDIASREDLVGMQARRALRAGQPLRGADLAKPDLVQRGQLV 265
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 504306901 265 TVIYQVPGIYLTTRGKAIESGAEGDTVSVLNLQTKRTLTGVVTGRGQVTVQGASQSAPMAPAVEQTSS 332
Cdd:PRK12786 266 TLIYQTPGIYLTARGKALEDGAEGDVVRVLNLQSKRTVTGTVTGRGQVSVDPAAAALAAAAATANTPA 333
|
|
| ChapFlgA |
pfam13144 |
Chaperone for flagella basal body P-ring formation; ChapFlgA is a family similar to the SAF ... |
192-314 |
1.22e-35 |
|
Chaperone for flagella basal body P-ring formation; ChapFlgA is a family similar to the SAF family, and includes chaperones for flagellar basal-body proteins and pilus-assembly proteins, FlgA, RcpB and CpaB. ChapFlgA is necessary for the formation of the P-ring of the flagellum, FlgI, which sits in the peptidoglycan layer of the outer membrane of the bacterium. FlgA plays an auxiliary role in P-ring assembly.
Pssm-ID: 432991 [Multi-domain] Cd Length: 122 Bit Score: 126.50 E-value: 1.22e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504306901 192 VEVAVLTRDIDRADLLKSSDIALERRPKAEVTGEPAsRDRSIGMQLRRPMRAGMPIRVADIVKPDFVSRDQSVTVIYQVP 271
Cdd:pfam13144 1 VPVVVAARPLARGEVITASDLALKKRDLARLPGGYL-TDQAIGKRVKRSIRAGQPIRQNMLEAPPLVKKGQKVTIIARGG 79
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 504306901 272 GIYLTTRGKAIESGAEGDTVSVLNLQTKRTLTGVVTGRGQVTV 314
Cdd:pfam13144 80 GFRITTEGKALENGAEGDQIRVKNLQSGRIVTGRVTGPGTVEV 122
|
|
| flgA_cterm |
TIGR03170 |
flagella basal body P-ring formation protein FlgA; This model describes a conserved C-terminal ... |
194-314 |
3.31e-32 |
|
flagella basal body P-ring formation protein FlgA; This model describes a conserved C-terminal region of the flagellar basal body P-ring formation protein FlgA. This sequence region contains a SAF domain, now described by pfam08666. [Cellular processes, Chemotaxis and motility]
Pssm-ID: 274466 [Multi-domain] Cd Length: 122 Bit Score: 117.63 E-value: 3.31e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504306901 194 VAVLTRDIDRADLLKSSDIALERRPKAEVTGEPAS-RDRSIGMQLRRPMRAGMPIRVADIVKPDFVSRDQSVTVIYQVPG 272
Cdd:TIGR03170 1 VVVAKRPLKRGEVITPEDLKLERGDLARLPGGVLTdPDEVVGKVAKRPLRAGQPLTANMLRPPWLVKRGDTVTVIARGGG 80
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 504306901 273 IYLTTRGKAIESGAEGDTVSVLNLQTKRTLTGVVTGRGQVTV 314
Cdd:TIGR03170 81 LSITTEGKALEDGAVGDQIRVRNLSSGKIISGIVTAPGTVEV 122
|
|
| FlgA |
COG1261 |
Flagellar basal body P-ring formation protein FlgA [Cell motility]; |
178-315 |
1.18e-31 |
|
Flagellar basal body P-ring formation protein FlgA [Cell motility];
Pssm-ID: 440873 [Multi-domain] Cd Length: 158 Bit Score: 117.30 E-value: 1.18e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504306901 178 APTKLRFTGTAIETVEVAVLTRDIDRADLLKSSDIALERRPKAEVTGEP-ASRDRSIGMQLRRPMRAGMPIRVADIVKPD 256
Cdd:COG1261 19 KGWTVYVPARVAVYGEVVVAARPLARGEVITADDLRLEEGDLARLPGGAlTDPDELVGKVARRSLRAGQPLRASDLRAPP 98
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 504306901 257 FVSRDQSVTVIYQVPGIYLTTRGKAIESGAEGDTVSVLNLQTKRTLTGVVTGRGQVTVQ 315
Cdd:COG1261 99 LVKRGQTVTIVARGGGFSVSAEGRALENGALGDRIRVRNLSSGKVVSGRVVGDGTVEVG 157
|
|
| flgA |
PRK07018 |
flagellar basal body P-ring formation protein FlgA; |
191-315 |
6.05e-18 |
|
flagellar basal body P-ring formation protein FlgA;
Pssm-ID: 180794 [Multi-domain] Cd Length: 235 Bit Score: 81.90 E-value: 6.05e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504306901 191 TVEVAVLTRDIDRADLLKSSDIALERR-----PKAEVTgepaSRDRSIGMQLRRPMRAGMPIRVADIVKPDFVSRDQSVT 265
Cdd:PRK07018 109 TGPYVVAARPLARGEKLSASDVTLREGdldtlPPGVFT----DPDQLVGAVSKRRIAPGQPIRLNMLRQAWVVCKGQTVS 184
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 504306901 266 VIYQVPGIYLTTRGKAIESGAEGDTVSVLNLQTKRTLTGVVTGRGQVTVQ 315
Cdd:PRK07018 185 IIARGDGFSVKTEGEALNDGAVGQQIRVRNMASGQVVSGIVTGDGEVEVN 234
|
|
| flgA |
PRK12618 |
flagellar basal body P-ring formation protein FlgA; |
193-315 |
2.07e-17 |
|
flagellar basal body P-ring formation protein FlgA;
Pssm-ID: 183626 [Multi-domain] Cd Length: 141 Bit Score: 78.20 E-value: 2.07e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504306901 193 EVAVLTRDIDRADLLKSSDIALErrpKAEVTGEPASRDRSIGMQLRRPMRAGMPIRVADIVKPDFVSRDQSVTVIYQVPG 272
Cdd:PRK12618 20 ETVVAARTIRALTVIGAEDLALK---PGDTPGALTDPAQAIGQEARVTLYAGRPIRAADLGPPAIVDRNQLVPLAYRLGG 96
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 504306901 273 IYLTTRGKAIESGAEGDTVSVLNLQTKRTLTGVVTGRGQVTVQ 315
Cdd:PRK12618 97 LEIRTEGRALSRGGVGDEIRVMNLSSRTTVSGRIAADGSVIVG 139
|
|
| flgA |
PRK06804 |
flagellar basal body P-ring formation protein FlgA; |
153-316 |
4.50e-16 |
|
flagellar basal body P-ring formation protein FlgA;
Pssm-ID: 235863 [Multi-domain] Cd Length: 261 Bit Score: 77.23 E-value: 4.50e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504306901 153 PVATRYDVRNGRFDIAFEinnesNPAPTKLRFTGTAIETVEVAVLTRDIDRADLLKSSDIALERRPKAEVTGEPASR-DR 231
Cdd:PRK06804 102 PTAETQHLSRLRYEVSCP-----DGQGWEVVVTVKPDIYLPVWVAKQTLERGRKVQADDIELKKKNISGVQGGYITDpDE 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504306901 232 SIGMQLRRPMRAGMPIRVADIVKPDFVSRDQSVTVIYQVPGIYLTTRGKAIESGAEGDTVSVLNLQTKRTLTGVVTGRGQ 311
Cdd:PRK06804 177 AIGLTIKRRIRQLQAVIPSQLEQPVLVERGQHVLMIAAQDGIEAQTLGIAQKNGRKGELIKVKNLSSGRVVTATVDGSGR 256
|
....*
gi 504306901 312 VTVQG 316
Cdd:PRK06804 257 VRMLG 261
|
|
| flgA |
PRK12617 |
flagellar basal body P-ring formation protein FlgA; |
193-314 |
5.08e-09 |
|
flagellar basal body P-ring formation protein FlgA;
Pssm-ID: 183625 [Multi-domain] Cd Length: 214 Bit Score: 56.07 E-value: 5.08e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504306901 193 EVAVLTRDIDRADLLKSSDIALERRPKAEVTGEP-ASRDRSIGMQLRRPMRAGMPIRVADIVKPDFVSRDQSVTVIYQVP 271
Cdd:PRK12617 90 DVLVLRRGITAGETISLADISIEKRDAARIVGAVlADPVAAVGKTARRILPAGSLLSANDLVSQRLVRRGDTVPLVSRNG 169
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 504306901 272 GIYLTTRGKAIESGAEGDTVSVLNLQTKRTLTGVVTGRGQVTV 314
Cdd:PRK12617 170 GLEVRMSGRALSDAGENERVSVENSSSRRVVQGIVEASGTVVV 212
|
|
| flgA |
PRK08515 |
flagellar basal body P-ring formation protein FlgA; |
163-315 |
7.58e-08 |
|
flagellar basal body P-ring formation protein FlgA;
Pssm-ID: 236280 [Multi-domain] Cd Length: 222 Bit Score: 52.70 E-value: 7.58e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504306901 163 GRFDIAFEINNESNpapTKLRFTGTAIETVEVAVLTRDIDRADLLKSSDIALERRPKAEVTGEPASRDRSIGMQLRRPMR 242
Cdd:PRK08515 74 GFGRASFKTPNNPN---KKLFFRYSIIANLEVLKSIRAIKKDDNLTANNTKKKRIPFGKLPKNPLLEDDIDNLSAKSFIP 150
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 504306901 243 AGMpIRVADIVKP-DFVSRDQSVTVIYQVPGIYLTTRGKAIESGAEGDTVSVLNlQTKRTLTGVVTGRGQVTVQ 315
Cdd:PRK08515 151 PGT-ILTADKFKAlILVRKNDIINGVLKEGGVSIEISLKALQDGNLGDIIQAKN-KSNKILKAKVLSKNKAEIL 222
|
|
| flgA |
PRK06005 |
flagellar basal body P-ring formation protein FlgA; |
228-315 |
1.12e-07 |
|
flagellar basal body P-ring formation protein FlgA;
Pssm-ID: 180347 [Multi-domain] Cd Length: 160 Bit Score: 50.84 E-value: 1.12e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504306901 228 SRDRSIGMQLRRPMRAGMPIRVADIVKPDFVSRDQSVTVIYQVPGIYLTTRGKAIESGAEGDTVSVLNLQTKRTLTGVVT 307
Cdd:PRK06005 71 SIDQVVGKVAKRTLLPGRPIPVSALREPSLVTRGSPVKLVFSAGGLTITAAGTPLQSGAAGDLIRVRNVDSGVIVSGTVL 150
|
....*...
gi 504306901 308 GRGQVTVQ 315
Cdd:PRK06005 151 ADGTIQVG 158
|
|
| SAF |
smart00858 |
This domain family includes a range of different proteins. Such as antifreeze proteins and ... |
192-253 |
7.88e-07 |
|
This domain family includes a range of different proteins. Such as antifreeze proteins and flagellar FlgA proteins, and CpaB pilus proteins;
Pssm-ID: 214862 [Multi-domain] Cd Length: 63 Bit Score: 46.02 E-value: 7.88e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 504306901 192 VEVAVLTRDIDRADLLKSSDIALERRPKAEVTGEPASR-DRSIGMQLRRPMRAGMPIRVADIV 253
Cdd:smart00858 1 DNVVVAARDLPAGEVITAEDLRLGHVALRDLPGGGLTPyGQVIGRVARRDIAAGEPITASNLE 63
|
|
| SAF_CpaB_FlgA_like |
cd11614 |
SAF domains of the flagella basal body P-ring formation protein FlgA and the flp pilus ... |
193-252 |
2.24e-06 |
|
SAF domains of the flagella basal body P-ring formation protein FlgA and the flp pilus assembly CpaB; FlgA is a putative periplasmic chaperone that assists in the formation of the flagellar P ring; CpaB is a protein invoved in the assembly of the flp pili, which are bacterial virulence factors mediating non-specific adherence to surfaces; these proteins appear to contain a single SAF domain. This intermediate family also contains the SAF domains of sialic acid synthetases and type III antifreeze proteins, which also share the same extensive core structure.
Pssm-ID: 212159 [Multi-domain] Cd Length: 61 Bit Score: 44.38 E-value: 2.24e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 504306901 193 EVAVLTRDIDRADLLKSSDIALERRPKAEVTGEPASRDRS-IGMQLRRPMRAGMPIRVADI 252
Cdd:cd11614 1 PVVVAARDLPAGTVITADDLTLVEVPLSLLPPGALTDPDDvVGRVARRPLRAGEPITASML 61
|
|
| SAF |
pfam08666 |
SAF domain; This domain family includes a range of different proteins. Such as antifreeze ... |
192-253 |
9.21e-06 |
|
SAF domain; This domain family includes a range of different proteins. Such as antifreeze proteins and flagellar FlgA proteins, and CpaB pilus proteins.
Pssm-ID: 430140 [Multi-domain] Cd Length: 63 Bit Score: 42.93 E-value: 9.21e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 504306901 192 VEVAVLTRDIDRADLLKSSDIALERRPKAEVTGEPASR-DRSIGMQLRRPMRAGMPIRVADIV 253
Cdd:pfam08666 1 DNVVVAARDLPAGEVITADDLTLVRPPLALPPGLFPIAyGEVIGKVARRDIAAGEPLTASDLE 63
|
|
| CpaB |
COG3745 |
Flp pilus assembly protein CpaB [Intracellular trafficking, secretion, and vesicular transport, ... |
188-256 |
7.01e-03 |
|
Flp pilus assembly protein CpaB [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 442959 [Multi-domain] Cd Length: 259 Bit Score: 37.66 E-value: 7.01e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504306901 188 AIETVEVAVLTRDIDRADLLKSSDIALERRPKAEVTGEPASRDRSI-GMQLRRPMRAGMPIRVADIVKPD 256
Cdd:COG3745 37 AVPTVPVVVAARDIPAGTPLTADDLAVVEWPADAVPEGAFTDPEELvGRVARVPIEAGEPILASKLAAPG 106
|
|
| |
