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Conserved domains on  [gi|504289435|ref|WP_014476537|]
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MULTISPECIES: phage-like element PBSX protein XtrA [Bacillus]

Protein Classification

XtrA/YqaO family protein( domain architecture ID 13879723)

XtrA/YqaO family protein similar to Bacillus subtilis phage-like element PBSX protein XtrA and uncharacterized protein YqaO

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PBSX_XtrA pfam17356
Phage-like element PBSX protein XtrA; This is a family of unknown function found in Bacilli.
 1-67 3.54e-20

Phage-like element PBSX protein XtrA; This is a family of unknown function found in Bacilli.


:

Pssm-ID: 407452  Cd Length: 64  Bit Score: 75.06  E-value: 3.54e-20
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 504289435   1 MIHPKKLLHIDSITLKSQLEEGKIRVIIVDGikqEAWITEAPEHGKTLVETRKGDLARVEFEIGYKL 67
Cdd:pfam17356  1 MRLKQIEISEDKLTIKQEIEKGKVIIIVSDG---KAKLADLPEHGKTKIITHKGKVKRVKFEIGEKF 64
 
Name Accession Description Interval E-value
PBSX_XtrA pfam17356
Phage-like element PBSX protein XtrA; This is a family of unknown function found in Bacilli.
 1-67 3.54e-20

Phage-like element PBSX protein XtrA; This is a family of unknown function found in Bacilli.


Pssm-ID: 407452  Cd Length: 64  Bit Score: 75.06  E-value: 3.54e-20
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 504289435   1 MIHPKKLLHIDSITLKSQLEEGKIRVIIVDGikqEAWITEAPEHGKTLVETRKGDLARVEFEIGYKL 67
Cdd:pfam17356  1 MRLKQIEISEDKLTIKQEIEKGKVIIIVSDG---KAKLADLPEHGKTKIITHKGKVKRVKFEIGEKF 64
 
Name Accession Description Interval E-value
PBSX_XtrA pfam17356
Phage-like element PBSX protein XtrA; This is a family of unknown function found in Bacilli.
 1-67 3.54e-20

Phage-like element PBSX protein XtrA; This is a family of unknown function found in Bacilli.


Pssm-ID: 407452  Cd Length: 64  Bit Score: 75.06  E-value: 3.54e-20
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 504289435   1 MIHPKKLLHIDSITLKSQLEEGKIRVIIVDGikqEAWITEAPEHGKTLVETRKGDLARVEFEIGYKL 67
Cdd:pfam17356  1 MRLKQIEISEDKLTIKQEIEKGKVIIIVSDG---KAKLADLPEHGKTKIITHKGKVKRVKFEIGEKF 64
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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