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Conserved domains on  [gi|502662325|ref|WP_012898339|]
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MULTISPECIES: F0F1 ATP synthase subunit delta [Lactococcus]

Protein Classification

FoF1 ATP synthase subunit delta( domain architecture ID 10012586)

F0F1 ATP synthase subunit delta is part of the catalytic core of the F-type ATPase that produces ATP from ADP in the presence of a proton gradient across the membrane

Gene Ontology:  GO:0046933|GO:0015986|GO:0045261
PubMed:  30901262
SCOP:  3000714

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK05758 PRK05758
F0F1 ATP synthase subunit delta; Validated
 6-175 1.63e-44

F0F1 ATP synthase subunit delta; Validated


:

Pssm-ID: 235593  Cd Length: 177  Bit Score: 144.93  E-value: 1.63e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502662325   6 SQKYSKALLEVAQEKGQLEAILSEVSEMIQLFKEDNLAAFLSSEVYSFSAKSELIDTLLQTSSEVMSNFLNTVRSNGRLG 85
Cdd:PRK05758   8 ARPYAKALFEVALEKGSLDAWSEELTFLAEVAENEDLAALLSSPLVSAEQKKKLLAAVFKSLSEYVQNFLKVLAENGRLA 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502662325  86 DLGEILDETKNAADDMFKIADVEVVSSIALTNAQIEKFTAMAKAKFDLNeVTVINTVNEKILGGFIVNSRGKIIDASLKT 165
Cdd:PRK05758  88 LLPEILEQFEALRAEHENIVDAEVTSAFPLSEEQLDKLKAALEKRLGRK-VKLNEKVDPSLIGGVIIKVGDRVIDGSVRG 166

                        170
                 ....*....|
gi 502662325 166 QLAKIAAEIL 175
Cdd:PRK05758 167 KLERLKDALK 176
 
Name Accession Description Interval E-value
PRK05758 PRK05758
F0F1 ATP synthase subunit delta; Validated
 6-175 1.63e-44

F0F1 ATP synthase subunit delta; Validated


Pssm-ID: 235593  Cd Length: 177  Bit Score: 144.93  E-value: 1.63e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502662325   6 SQKYSKALLEVAQEKGQLEAILSEVSEMIQLFKEDNLAAFLSSEVYSFSAKSELIDTLLQTSSEVMSNFLNTVRSNGRLG 85
Cdd:PRK05758   8 ARPYAKALFEVALEKGSLDAWSEELTFLAEVAENEDLAALLSSPLVSAEQKKKLLAAVFKSLSEYVQNFLKVLAENGRLA 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502662325  86 DLGEILDETKNAADDMFKIADVEVVSSIALTNAQIEKFTAMAKAKFDLNeVTVINTVNEKILGGFIVNSRGKIIDASLKT 165
Cdd:PRK05758  88 LLPEILEQFEALRAEHENIVDAEVTSAFPLSEEQLDKLKAALEKRLGRK-VKLNEKVDPSLIGGVIIKVGDRVIDGSVRG 166

                        170
                 ....*....|
gi 502662325 166 QLAKIAAEIL 175
Cdd:PRK05758 167 KLERLKDALK 176
AtpH COG0712
FoF1-type ATP synthase, delta subunit [Energy production and conversion]; FoF1-type ATP ...
 7-175 8.94e-37

FoF1-type ATP synthase, delta subunit [Energy production and conversion]; FoF1-type ATP synthase, delta subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440476  Cd Length: 178  Bit Score: 125.27  E-value: 8.94e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502662325   7 QKYSKALLEVAQEKGQLEAILSEVSEMIQLFKED-NLAAFLSSEVYSFSAKSELIDTLLQ-TSSEVMSNFLNTVRSNGRL 84
Cdd:COG0712    8 RRYAKALFELAKEKGALDEVEEELFALAALLAENpELRALLSSPVISAEEKKELLEALFGgKLSPETLNFLKLLVENGRL 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502662325  85 GDLGEILDETKNAADDMFKIADVEVVSSIALTNAQIEKFTAMAKAKFDlNEVTVINTVNEKILGGFIVNSRGKIIDASLK 164
Cdd:COG0712   88 ALLPEIAEEFEELAAERRGIVVAEVTSAVPLSEEQLERLAAALEKKTG-KKVELNVKVDPSLIGGVVVRVGDKVIDGSVR 166

                        170
                 ....*....|.
gi 502662325 165 TQLAKIAAEIL 175
Cdd:COG0712  167 GRLNRLRRALK 177
OSCP pfam00213
ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP ...
 6-174 2.88e-36

ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP subunit which is this family. The ATP D subunit from metazoa are found in family pfam00401.


Pssm-ID: 459714  Cd Length: 172  Bit Score: 123.79  E-value: 2.88e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502662325    6 SQKYSKALLEVAQEKGQLEAILSEVSEMIQLFKEDN-LAAFLSSEVYSFSAKSELIDTLLQTS-SEVMSNFLNTVRSNGR 83
Cdd:pfam00213   2 ARRYAKALFELAKEKGKLDQVEEELEALEAALAENPdLAAFLSNPTISAEEKKALLLELFKGLlSPLTLNFLKLLAENGR 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502662325   84 LGDLGEILDETKNAADDMFKIADVEVVSSIALTNAQIEKFTAMAKAKFDLNEVTVINTVNEKILGGFIVNSRGKIIDASL 163
Cdd:pfam00213  82 LGLLPEIAEEFEELLDEARGIVEAEVTSAVPLSEEQLEKLAAALEKKTGKKKVKLENKVDPSLIGGVVVRVGDKVIDGSV 161

                         170
                  ....*....|.
gi 502662325  164 KTQLAKIAAEI 174
Cdd:pfam00213 162 KGKLERLKRAL 172
ATP_synt_delta TIGR01145
ATP synthase, F1 delta subunit; This model describes the ATP synthase delta subunit in ...
 6-171 3.26e-19

ATP synthase, F1 delta subunit; This model describes the ATP synthase delta subunit in bacteria, mitochondria, and chloroplasts. It is sometimes called OSCP for Oligomycin Sensitivity Conferring Protein. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Delta subunit belongs to the F1 cluster or sector and functionally implicated in the overall stability of the complex. Expression of truncated forms of this subunit results in low ATPase activity. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 130215 [Multi-domain]  Cd Length: 172  Bit Score: 79.66  E-value: 3.26e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502662325    6 SQKYSKALLEVAQEKGQLEAILSEVSEMIQLFKED-NLAAFLSSEVYSFSAKSELI-DTLLQTSSEVMSNFLNTVRSNGR 83
Cdd:TIGR01145   2 ARPYAKALFEIANEKSSLEEWGEMLNFVKEVLKNNkELKKFLSNPLISAEKKKEFIkNVFGEQLDESSLNLLLLLAENGR 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502662325   84 LGDLGEILDETKNAADDMFKIADVEVVSSIALTNAQIEKFTAMAKAKFDLNEVTVINTVNEKILGGFIVNSRGKIIDASL 163
Cdd:TIGR01145  82 LAALPDILDQFLKLSYEAQQTADVEVISAKPLTEDQQAKIAEKLEKITGAAKVKLNCKVDKDLIGGVIIRIGDRVIDGSV 161


                  ....*...
gi 502662325  164 KTQLAKIA 171
Cdd:TIGR01145 162 RGQLKRLS 169
 
Name Accession Description Interval E-value
PRK05758 PRK05758
F0F1 ATP synthase subunit delta; Validated
 6-175 1.63e-44

F0F1 ATP synthase subunit delta; Validated


Pssm-ID: 235593  Cd Length: 177  Bit Score: 144.93  E-value: 1.63e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502662325   6 SQKYSKALLEVAQEKGQLEAILSEVSEMIQLFKEDNLAAFLSSEVYSFSAKSELIDTLLQTSSEVMSNFLNTVRSNGRLG 85
Cdd:PRK05758   8 ARPYAKALFEVALEKGSLDAWSEELTFLAEVAENEDLAALLSSPLVSAEQKKKLLAAVFKSLSEYVQNFLKVLAENGRLA 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502662325  86 DLGEILDETKNAADDMFKIADVEVVSSIALTNAQIEKFTAMAKAKFDLNeVTVINTVNEKILGGFIVNSRGKIIDASLKT 165
Cdd:PRK05758  88 LLPEILEQFEALRAEHENIVDAEVTSAFPLSEEQLDKLKAALEKRLGRK-VKLNEKVDPSLIGGVIIKVGDRVIDGSVRG 166

                        170
                 ....*....|
gi 502662325 166 QLAKIAAEIL 175
Cdd:PRK05758 167 KLERLKDALK 176
AtpH COG0712
FoF1-type ATP synthase, delta subunit [Energy production and conversion]; FoF1-type ATP ...
 7-175 8.94e-37

FoF1-type ATP synthase, delta subunit [Energy production and conversion]; FoF1-type ATP synthase, delta subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440476  Cd Length: 178  Bit Score: 125.27  E-value: 8.94e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502662325   7 QKYSKALLEVAQEKGQLEAILSEVSEMIQLFKED-NLAAFLSSEVYSFSAKSELIDTLLQ-TSSEVMSNFLNTVRSNGRL 84
Cdd:COG0712    8 RRYAKALFELAKEKGALDEVEEELFALAALLAENpELRALLSSPVISAEEKKELLEALFGgKLSPETLNFLKLLVENGRL 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502662325  85 GDLGEILDETKNAADDMFKIADVEVVSSIALTNAQIEKFTAMAKAKFDlNEVTVINTVNEKILGGFIVNSRGKIIDASLK 164
Cdd:COG0712   88 ALLPEIAEEFEELAAERRGIVVAEVTSAVPLSEEQLERLAAALEKKTG-KKVELNVKVDPSLIGGVVVRVGDKVIDGSVR 166

                        170
                 ....*....|.
gi 502662325 165 TQLAKIAAEIL 175
Cdd:COG0712  167 GRLNRLRRALK 177
OSCP pfam00213
ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP ...
 6-174 2.88e-36

ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP subunit which is this family. The ATP D subunit from metazoa are found in family pfam00401.


Pssm-ID: 459714  Cd Length: 172  Bit Score: 123.79  E-value: 2.88e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502662325    6 SQKYSKALLEVAQEKGQLEAILSEVSEMIQLFKEDN-LAAFLSSEVYSFSAKSELIDTLLQTS-SEVMSNFLNTVRSNGR 83
Cdd:pfam00213   2 ARRYAKALFELAKEKGKLDQVEEELEALEAALAENPdLAAFLSNPTISAEEKKALLLELFKGLlSPLTLNFLKLLAENGR 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502662325   84 LGDLGEILDETKNAADDMFKIADVEVVSSIALTNAQIEKFTAMAKAKFDLNEVTVINTVNEKILGGFIVNSRGKIIDASL 163
Cdd:pfam00213  82 LGLLPEIAEEFEELLDEARGIVEAEVTSAVPLSEEQLEKLAAALEKKTGKKKVKLENKVDPSLIGGVVVRVGDKVIDGSV 161

                         170
                  ....*....|.
gi 502662325  164 KTQLAKIAAEI 174
Cdd:pfam00213 162 KGKLERLKRAL 172
PRK13429 PRK13429
F0F1 ATP synthase subunit delta; Provisional
 6-170 6.48e-29

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 237386  Cd Length: 181  Bit Score: 105.29  E-value: 6.48e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502662325   6 SQKYSKALLEVAQEKGQLEAILSEVSEMIQLFKEDN-LAAFLSSEVYSFSAKSELIDTLL--QTSSEVMSNFLNTVRSNG 82
Cdd:PRK13429   7 ARRYAKALFQLAKEKGQLDSVYEELKQLAELLEDSPeLRDALSNPVLSAEEKKAVLEKLLgkLKVSPEVLNFLKLLADRR 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502662325  83 RLGDLGEILDETKNAADDMFKIADVEVVSSIALTNAQIEKFTAMAKAKFDlNEVTVINTVNEKILGGFIVNSRGKIIDAS 162
Cdd:PRK13429  87 RLGILPEIAARYLELADEQKGIVRATVTSAVPLSEAQQEAIRQKLEKMTG-KKVELDTAVDPSLIGGVVVKIGDKVLDAS 165


                 ....*...
gi 502662325 163 LKTQLAKI 170
Cdd:PRK13429 166 VRTQLRRL 173
ATP_synt_delta TIGR01145
ATP synthase, F1 delta subunit; This model describes the ATP synthase delta subunit in ...
 6-171 3.26e-19

ATP synthase, F1 delta subunit; This model describes the ATP synthase delta subunit in bacteria, mitochondria, and chloroplasts. It is sometimes called OSCP for Oligomycin Sensitivity Conferring Protein. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Delta subunit belongs to the F1 cluster or sector and functionally implicated in the overall stability of the complex. Expression of truncated forms of this subunit results in low ATPase activity. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 130215 [Multi-domain]  Cd Length: 172  Bit Score: 79.66  E-value: 3.26e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502662325    6 SQKYSKALLEVAQEKGQLEAILSEVSEMIQLFKED-NLAAFLSSEVYSFSAKSELI-DTLLQTSSEVMSNFLNTVRSNGR 83
Cdd:TIGR01145   2 ARPYAKALFEIANEKSSLEEWGEMLNFVKEVLKNNkELKKFLSNPLISAEKKKEFIkNVFGEQLDESSLNLLLLLAENGR 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502662325   84 LGDLGEILDETKNAADDMFKIADVEVVSSIALTNAQIEKFTAMAKAKFDLNEVTVINTVNEKILGGFIVNSRGKIIDASL 163
Cdd:TIGR01145  82 LAALPDILDQFLKLSYEAQQTADVEVISAKPLTEDQQAKIAEKLEKITGAAKVKLNCKVDKDLIGGVIIRIGDRVIDGSV 161


                  ....*...
gi 502662325  164 KTQLAKIA 171
Cdd:TIGR01145 162 RGQLKRLS 169
atpD CHL00119
ATP synthase CF1 delta subunit; Validated
 6-172 9.15e-16

ATP synthase CF1 delta subunit; Validated


Pssm-ID: 177042  Cd Length: 184  Bit Score: 71.17  E-value: 9.15e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502662325   6 SQKYSKALLEVAQEKGQLEAILSEVSEMIQLFKEDN-LAAFLSSEVYSFSAKSELIDTLL--QTSSEVMsNFLNTVRSNG 82
Cdd:CHL00119   9 AQPYAEALLEFAKEKNIMEQITADIQLILTFLNESPeLKKFLANPLISKNAKKEVIKKTFgsQINENTL-KFLMVLVDRG 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502662325  83 RLGDLGEILDETKNAADDMFKIADVEVVSSIALTNAQIEKFTAMAKAKFDLNEVTVINTVNEKILGGFIVNSRGKIIDAS 162
Cdd:CHL00119  88 RIALLDAIIEKYLELVYKLASIKIAEVSTAVPLSSAQEEALIEKLKEMTNAKEIKLVITVDPSLIGGFLIKIGSKVIDTS 167

                        170
                 ....*....|
gi 502662325 163 LKTQLAKIAA 172
Cdd:CHL00119 168 IKGQLKQLAS 177
PRK13434 PRK13434
F0F1 ATP synthase subunit delta; Provisional
 6-175 3.03e-12

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 139571  Cd Length: 184  Bit Score: 61.87  E-value: 3.03e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502662325   6 SQKYSKALLEvaqEKGQLEAILSEVSEMIQL-FKEDNLAAFLSSEVYSFSAKSE-LIDTLLQTSSEVMSNFLNTVRSNGR 83
Cdd:PRK13434   7 SKVYASALLG---AANSPEEVEQELGDLVQLlFKDEKIRNFFLSPTVSPEEKEQtLAKNLRGKISDITLNFLGVLLNKGR 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502662325  84 LGDLGEILDETKNAADDMFKIADVEVVSSIALTNAQIEKFTAMAKAKFDlNEVTVINTVNEKILGGFIVNSRGKIIDASL 163
Cdd:PRK13434  84 FIYLPEIQKDFTVELDKKKGRVRAQIVSYPSLEPAQVDKLGSILSEKFK-SEFILEVSEDKNLLGGFVVQFNDLKIEKSI 162

                        170
                 ....*....|..
gi 502662325 164 KTQLAKIAAEIL 175
Cdd:PRK13434 163 ASQLGEIKKAML 174
PRK13441 PRK13441
F0F1 ATP synthase subunit delta; Provisional
 6-175 1.15e-07

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 184054  Cd Length: 180  Bit Score: 48.98  E-value: 1.15e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502662325   6 SQKYSKALLEVAQEKGQLEA---ILSEVSEMIQLFKEdnlaaFLSSEVYSFSAKSELIDTLL----QTSSEVMSNFLNTV 78
Cdd:PRK13441   7 ASKYARALLNVAIELEKEEEygeFLDLVCQIYESAKE-----FFDNPIVKPEKKVSLIKEIMkefgQEMDEFFENFLNLV 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502662325  79 RSNGRLGDLGEILDETKNAADDMFKIADVEVVSSIALTNAQIEKFTAMAKaKFDLNEVTVINTVNEKILGGFIVNSRGKI 158
Cdd:PRK13441  82 FENKRQKLLPQIRALFEYEKILSEQKVPVNLTTAHELSDEELKLLRKFVR-KYVLRDPVFEETIDESLIAGAVVEFEGKR 160

                        170
                 ....*....|....*..
gi 502662325 159 IDASLKTQLAKIAAEIL 175
Cdd:PRK13441 161 LDVTVQGRLKKIAREVL 177
PRK08474 PRK08474
F0F1 ATP synthase subunit delta; Validated
 1-132 1.43e-07

F0F1 ATP synthase subunit delta; Validated


Pssm-ID: 236271  Cd Length: 176  Bit Score: 48.82  E-value: 1.43e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502662325   1 MTKVNSQKYSKALLEVAQEKgQLEAILSEVSEMIQLFKEDNLAAFLSSEVYSFSAKSELIDTLLQTSSEVMSNFLNTVRS 80
Cdd:PRK08474   1 MEELIAKRYAKALLSSLSSD-ELNDIYSNLKILSSAFADEKFKEIISSPEISKEQKIEFLLSFVDNANAKFQNFIKLLAE 79

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 502662325  81 NGRLGDLGEILDETKNAADDMFKIADVEVVSSIALTNAQIEKFTAMAKAKFD 132
Cdd:PRK08474  80 NKRLELIPAIAKELERQIALKENEYVGVVYSNEKLSEETLKKLEEKLSKKFN 131
PRK13428 PRK13428
F0F1 ATP synthase subunit delta; Provisional
 12-174 1.54e-03

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 184048 [Multi-domain]  Cd Length: 445  Bit Score: 38.18  E-value: 1.54e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502662325  12 ALLEVAQEKGQLEailsEVSEmiQLFK-------EDNLAAFLSSEVYSFSAKSELIDTLLQTSSEVMSNFLNTVRSNGRL 84
Cdd:PRK13428 278 ALLERAERAGQVD----EVED--QLFRfsrildaQPRLAILLSDYTVPADGRVALLRKVLGGASTVNPVTVALLSQTVEL 351

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502662325  85 GDlGEILDEtknAADDMFKIAD-------VEVVSSIALTNAQIEKFTAMAkAKFDLNEVTVINTVNEKILGGFIVNSRGK 157
Cdd:PRK13428 352 LR-GQPAEE---AVLFLAELAVarrgevvAQVSAAAELSDAQRTRLTEVL-SRIYGRPVSVQLHIDPELLGGLSIAVGDE 426

                        170
                 ....*....|....*..
gi 502662325 158 IIDASLKTQLAKIAAEI 174
Cdd:PRK13428 427 VIDGTLSSRLAAAEAQL 443
PRK13430 PRK13430
F0F1 ATP synthase subunit delta; Provisional
 12-169 5.39e-03

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 237387 [Multi-domain]  Cd Length: 271  Bit Score: 36.46  E-value: 5.39e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502662325  12 ALLEVAQEKGQLEAILSEvsemiqLF-------KEDNLAAFLSSEVYSFSAKSELIDTLL----QTSSEVMSNFLnTVRS 80
Cdd:PRK13430 106 ALLASAEAQGALDDVEDE------LFrlgrilaSNPELRLALSDRAAPAEAKRELLARLLygkvTPVTERLAEQA-VGRP 178

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502662325  81 NGRlgDLGEILDETKNAADDMFKIADVEVVSSIALTNAQIEKFTAMAKAKFDlNEVTVINTVNEKILGGFIVNSRGKIID 160
Cdd:PRK13430 179 RGR--SIEEGLDELSNLAAARRGRSVATVTTAVPLSDEQKQRLAAALSRIYG-RPVHLNSEVDPSVLGGMRVQVGDEVID 255


                 ....*....
gi 502662325 161 ASLKTQLAK 169
Cdd:PRK13430 256 GSVAGRLER 264
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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