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Conserved domains on  [gi|502651582|ref|WP_012887844|]
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MULTISPECIES: type Z 30S ribosomal protein S14 [Streptosporangiaceae]

Protein Classification

30S ribosomal protein S14( domain architecture ID 10012995)

30S ribosomal protein S14 type Z is located in the peptidyl transferase center and involved in assembly of the 30S ribosome subunit

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
rpsN PRK08061
type Z 30S ribosomal protein S14;
1-61 1.94e-34

type Z 30S ribosomal protein S14;


:

Pssm-ID: 181216  Cd Length: 61  Bit Score: 110.73  E-value: 1.94e-34
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 502651582  1 MAKTSLKVKAARKAKFEVRAYTRCSRCGRPRAVYRKFGLCRICFREMAHRGELPGITKSSW 61
Cdd:PRK08061  1 MAKKSLIAKAKRKPKFKVRAYTRCERCGRPHSVYRKFGLCRICFRELAYKGQIPGVKKASW 61
 
Name Accession Description Interval E-value
rpsN PRK08061
type Z 30S ribosomal protein S14;
1-61 1.94e-34

type Z 30S ribosomal protein S14;


Pssm-ID: 181216  Cd Length: 61  Bit Score: 110.73  E-value: 1.94e-34
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 502651582  1 MAKTSLKVKAARKAKFEVRAYTRCSRCGRPRAVYRKFGLCRICFREMAHRGELPGITKSSW 61
Cdd:PRK08061  1 MAKKSLIAKAKRKPKFKVRAYTRCERCGRPHSVYRKFGLCRICFRELAYKGQIPGVKKASW 61
RpsN COG0199
Ribosomal protein S14 [Translation, ribosomal structure and biogenesis]; Ribosomal protein S14 ...
 1-61 2.68e-31

Ribosomal protein S14 [Translation, ribosomal structure and biogenesis]; Ribosomal protein S14 is part of the Pathway/BioSystem: Ribosome 30S subunit


Pssm-ID: 439969  Cd Length: 60  Bit Score: 102.78  E-value: 2.68e-31
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 502651582  1 MAKTSLKVKAARKAKfEVRAYTRCSRCGRPRAVYRKFGLCRICFREMAHRGELPGITKSSW 61
Cdd:COG0199   1 MAKKSMIARNKKRPK-PVRLRNRCELTGRPRGYYRKFGLCRICFRELAHRGEIPGVKKASW 60
Ribosomal_S14 pfam00253
Ribosomal protein S14p/S29e; This family includes both ribosomal S14 from prokaryotes and S29 ...
 18-60 4.70e-21

Ribosomal protein S14p/S29e; This family includes both ribosomal S14 from prokaryotes and S29 from eukaryotes.


Pssm-ID: 459734  Cd Length: 54  Bit Score: 76.68  E-value: 4.70e-21
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|...
gi 502651582  18 VRAYTRCSRCGRPRAVYRKFGLCRICFREMAHRGELPGITKSS 60
Cdd:pfam00253 12 TRIRNRCRLTGRPRGVIRKFGLCRICFRELALKGEIPGVKKAS 54
 
Name Accession Description Interval E-value
rpsN PRK08061
type Z 30S ribosomal protein S14;
1-61 1.94e-34

type Z 30S ribosomal protein S14;


Pssm-ID: 181216  Cd Length: 61  Bit Score: 110.73  E-value: 1.94e-34
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 502651582  1 MAKTSLKVKAARKAKFEVRAYTRCSRCGRPRAVYRKFGLCRICFREMAHRGELPGITKSSW 61
Cdd:PRK08061  1 MAKKSLIAKAKRKPKFKVRAYTRCERCGRPHSVYRKFGLCRICFRELAYKGQIPGVKKASW 61
RpsN COG0199
Ribosomal protein S14 [Translation, ribosomal structure and biogenesis]; Ribosomal protein S14 ...
 1-61 2.68e-31

Ribosomal protein S14 [Translation, ribosomal structure and biogenesis]; Ribosomal protein S14 is part of the Pathway/BioSystem: Ribosome 30S subunit


Pssm-ID: 439969  Cd Length: 60  Bit Score: 102.78  E-value: 2.68e-31
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 502651582  1 MAKTSLKVKAARKAKfEVRAYTRCSRCGRPRAVYRKFGLCRICFREMAHRGELPGITKSSW 61
Cdd:COG0199   1 MAKKSMIARNKKRPK-PVRLRNRCELTGRPRGYYRKFGLCRICFRELAHRGEIPGVKKASW 60
Ribosomal_S14 pfam00253
Ribosomal protein S14p/S29e; This family includes both ribosomal S14 from prokaryotes and S29 ...
 18-60 4.70e-21

Ribosomal protein S14p/S29e; This family includes both ribosomal S14 from prokaryotes and S29 from eukaryotes.


Pssm-ID: 459734  Cd Length: 54  Bit Score: 76.68  E-value: 4.70e-21
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|...
gi 502651582  18 VRAYTRCSRCGRPRAVYRKFGLCRICFREMAHRGELPGITKSS 60
Cdd:pfam00253 12 TRIRNRCRLTGRPRGVIRKFGLCRICFRELALKGEIPGVKKAS 54
rpsN PRK08881
30S ribosomal protein S14; Reviewed
 18-61 9.91e-21

30S ribosomal protein S14; Reviewed


Pssm-ID: 181574  Cd Length: 101  Bit Score: 77.11  E-value: 9.91e-21
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....
gi 502651582  18 VRAYTRCSRCGRPRAVYRKFGLCRICFREMAHRGELPGITKSSW 61
Cdd:PRK08881  58 TRLRNRCELTGRPRGYYRKFGLSRIKLRELAHRGEIPGVVKASW 101
rps14 CHL00074
ribosomal protein S14
 18-61 2.02e-16

ribosomal protein S14


Pssm-ID: 214354  Cd Length: 100  Bit Score: 66.37  E-value: 2.02e-16
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....
gi 502651582  18 VRAYTRCSRCGRPRAVYRKFGLCRICFREMAHRGELPGITKSSW 61
Cdd:CHL00074  57 TRLHNRCFLTGRPRGNYRDFGLSRHVLREMAHACLLPGVTKSSW 100
rpsN PRK06911
30S ribosomal protein S14; Reviewed
 18-61 5.77e-12

30S ribosomal protein S14; Reviewed


Pssm-ID: 180742 [Multi-domain]  Cd Length: 100  Bit Score: 55.07  E-value: 5.77e-12
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....
gi 502651582  18 VRAYTRCSRCGRPRAVYRKFGLCRICFREMAHRGELPGITKSSW 61
Cdd:PRK06911  57 VRYVTRCKQCGRPHAVYRKFNLCRICLRQQLMVGNIPGGRKSSW 100
rps14P PRK05766
30S ribosomal protein S14P; Reviewed
 7-49 2.00e-05

30S ribosomal protein S14P; Reviewed


Pssm-ID: 235598  Cd Length: 52  Bit Score: 37.18  E-value: 2.00e-05
                        10        20        30        40
                ....*....|....*....|....*....|....*....|....*
gi 502651582  7 KVKAARKAKFEvRAYTRCSRCGRPRAVYRKFG--LCRICFREMAH 49
Cdd:PRK05766  1 KYKPPKKRKYG-KGARECQRCGRKQGLIRKYGlyLCRQCFREVAP 44
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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