|
Name |
Accession |
Description |
Interval |
E-value |
| T4SS_IcmE_DotG |
NF033900 |
type IVB secretion system protein DotG/IcmE; |
38-1029 |
0e+00 |
|
type IVB secretion system protein DotG/IcmE;
Pssm-ID: 468233 [Multi-domain] Cd Length: 1012 Bit Score: 1046.23 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501565288 38 IWHHKATEDAFKSTAEVSSPPTIESLPGAGNPSDAYVKTQNIQNAQQASEARKGGTSFVPTITRPSFLGSEDQFEQDQPS 117
Cdd:NF033900 26 IKFHRSQEGSSAGSAVVRAPPGIQSIPGAGDPTAQYAKLQEQQNVQQAQQALKTGGSAIPTIIRTQAVGSGVQFIGSQQG 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501565288 118 AP----TTDLKKRNCPIKKVVYMYKPNPASCTVDNLKLARSAGVTAEELVCQSCSCPSLRLAGYTAGELKEVGYSAVELR 193
Cdd:NF033900 106 EGgvgfSTLAREDEAGTQKSLWLQKLNPANCSKCNLQLARSQGVTALELLKQGCSCPQLKDAGYTAGELKQVGCSAKELK 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501565288 194 KCGFSIAQLQAAGFSAKDLKAAGFTAAQLKAAGFSAGELADAGFTRDQIKAAGYSSAEMQAAGIQTN--------NPDCD 265
Cdd:NF033900 186 AAGFSARQLKDAGYSAKRLRAAGFSACELRNAGFSAQELKDAGFSDGELKGAGFSDSEIAAAGGLPEgitaadvrKAGCD 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501565288 266 LAALKKARASGVTAAELRqkgcglaalKAAGFTAAELKDAGFTAAQLKAAGFSAKDLKAAGFTAAQLKAAGFSAKDLKSA 345
Cdd:NF033900 266 AAALKKLRAAGVSAAAIR---------RISGCSAAQLKAAGYTAKELKNAGFSAADLKNAGFTPAELKAAGFSARDLLNA 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501565288 346 GFSAVALKQAGFSNADLKDAGFSPEQIQAADKVAK-VCDVEAL-KAARAQGISAKELKEKGCGLAALKAAGFTAAELKDA 423
Cdd:NF033900 337 GFSPSDLKDAGFSPAELKAAGFELPPGITAGDVKKaGCDVDALlKERLAGGSAALILKYAGCSAAALKAAGFTAKDLANA 416
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501565288 424 GFTAAQLKGAgFSAADLKAAGFSAAQLK---AAGFSAKALKAA-GFSAHDLATAGFNASQLKDAGFTADDLKAAGFSDQA 499
Cdd:NF033900 417 GFTPEQIIAA-LSDEAIRAAGCDPEKLKelrAQGVSAKRIRDLnGCSAAALKAAGFSAKDLLDAGFTPQELKAAGFTPKQ 495
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501565288 500 LSAAGFPPSsgDCSVKALKKARMAGISATELKEKGCGLAALKAAGFTAAELKSAGFTAAQLKAAGFSAKDLKGAGFSAAE 579
Cdd:NF033900 496 LKQAGLNPA--AIIAAGRTADCSVASLAAARKAGVSAATIKQTLGCSAAALKDAGFTAAQLKAAGFTAAELKNAGFSAAE 573
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501565288 580 LKAAGFGAKDLKDAGYSAQDLKAAGFSAAQLKDAGFDAQALKDAGFSAADLKNAGFSaealknAGFSAAQLKAAGFSAGA 659
Cdd:NF033900 574 LKAAGFSAKELKDAGFSAADLKDAGFSAGQLKAAGFSAADLKAAGFTAAQLKAAGFS------AKFSAKDLKAAGFSAAE 647
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501565288 660 LKAAGFSASQLKAAGFDAKALRDAGFSAGELKAAGFSPEELRHAGYSkgdllragytaeqagyPPSSPPGTEvsQSAQRP 739
Cdd:NF033900 648 LKAAGFSAKELKAAGFSAGDLKRAGFSADELGAAGFSAAELLNAGFS----------------PGASVAGLQ--QAALVP 709
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501565288 740 PLSADNSAAsvsglNNSQSSAMPSINSDSPEARLRALQKLQQEQLNEQQRRDVEQQMQGQMSLQAQKLMAGWSNDSGQAY 819
Cdd:NF033900 710 SGITSASAA-----IPSIGGAASATAAAAPAQRLQAILKRQQQQMADQQYQQAIQQRQSQMLSAANQLLQTWKKVSAQTY 784
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501565288 820 QVALQQPATTPVGGNVSSQQGAGAA-----------AKPTGPVIKAGTIMFAVLDTGINSDEKSPILATIVTGKLKGSKL 888
Cdd:NF033900 785 TAGPPEEANAGGAPGNAGNAPGGASgnapatatgagGMAQKAIIKTGTIMFAVLDTSVNSDEPGPILATIVSGKLKGAKL 864
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501565288 889 IGDFSR--VDKKVLLKFNLLNVPSFDHTFGINAVAIDPDTARTAIAKSVNSHYLLRYGSLFASAFLSGLSQGIIQSGSTE 966
Cdd:NF033900 865 IGSFNLpsNADKMVISFNTMSVPGASKTISINAVAIDPNTARTALSGRVNHHYLLRYGSLFASSFLSGFGNAFQSANTTV 944
|
970 980 990 1000 1010 1020
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 501565288 967 DCFFGICHRQYSK-----LNTAQYIALGMGNVGEQYATVMGNNFNRAPTIRVPGGTGIGLLFMSDITL 1029
Cdd:NF033900 945 TIGGTGGGDNITNqngigRSTLENAVIGLGTVGKSWGQVAQQQFNTPPTVEVYSGTGIGILFTQDVTL 1012
|
|
| IcmE |
cd16431 |
DotG/IcmE is a homolog of VirB10 which forms part of core complex in Type IV secretion system; ... |
851-1030 |
6.22e-59 |
|
DotG/IcmE is a homolog of VirB10 which forms part of core complex in Type IV secretion system; This family contains DotG/IcmE (VirB10 homolog) and a component of the type IV secretion system (T4SS), and similar proteins. The Dot/Icm system is a T4SS found in the pathogens Legionella and Coxiella and the conjugative apparatus of IncI plasmids; T4SS is employed by pathogenic bacteria to export virulence DNAs and/or proteins directly from the bacterial cytoplasm into the host cell. Similar to T4SS VirB/D components, the Legionella Dot/Icm secretion apparatus contains a critical five-protein sub-assembly that forms the membrane-spanning 'core-complex' (CC), around which all other components assemble. This transmembrane connection is mediated by protein dimer pairs consisting of two inner membrane proteins, DotF and DotG, each independently associating with DotH/DotC/DotD in the outer membrane.
Pssm-ID: 319757 Cd Length: 179 Bit Score: 199.73 E-value: 6.22e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501565288 851 VIKAGTIMFAVLDTGINSDEKSPILATIVTGKLKGSKLIGDFSRVDKKVLLKFNLLNVPSfDHTFGINAVAIDPDTArTA 930
Cdd:cd16431 1 LIPAGTIVYAVLDTAVNSDEPGPVLATIRSGPLKGARLIGSFERSGDGVVITFTTMVLPG-GKSYPIDAYALDDRTL-SA 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501565288 931 IAKSVNSHYLLRYGSLFASAFLSGLSQGIIQSGSTEDCF-FGICHRQYSKLNTAQYIALGMGNVGEQYATVMGNNFNRAP 1009
Cdd:cd16431 79 VASDVDNHYLSRYGLPAAAAFLQGLGQAYQQAGTTTTSTsGGTVTVTTGTPDGKQAAGAAAGGVGQQLGQVLAQDANRPP 158
|
170 180
....*....|....*....|.
gi 501565288 1010 TIRVPGGTGIGLLFMSDITLP 1030
Cdd:cd16431 159 TVTVPAGTPIGILFMSDVTDP 179
|
|
| TrbI |
pfam03743 |
Bacterial conjugation TrbI-like protein; Although not essential for conjugation, the TrbI ... |
851-1028 |
2.99e-26 |
|
Bacterial conjugation TrbI-like protein; Although not essential for conjugation, the TrbI protein greatly increase the conjugational efficiency.
Pssm-ID: 427480 Cd Length: 187 Bit Score: 106.97 E-value: 2.99e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501565288 851 VIKAGTIMFAVLDTGINSDEKSPILATI-------VTGKL----KGSKLIGDFSRV----DKKVLLKFNLLNVPSFdHTF 915
Cdd:pfam03743 1 YLPAGTVIPAVLITGINSDLPGQVTAQVtepvydsATGRAllipKGSRLIGEYGSGvaygQERVLVVWTRLICPDG-VSI 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501565288 916 GINAVAIDPDTARTAIAKSVNSHYLLRYGSLFASAFLSGLSQGIIQSGSTEDCFfgichrQYSKLNTAQYIALGMGNVGE 995
Cdd:pfam03743 80 DLDSPGGVDALGRAGLRGRVDNHFGQRFGAALLLSLLGGGGELANAASSNSTST------STGNDNLLGAVGSGAGQALS 153
|
170 180 190
....*....|....*....|....*....|....
gi 501565288 996 QYA-TVMGNNFNRAPTIRVPGGTGIGLLFMSDIT 1028
Cdd:pfam03743 154 QLAqQILERALNIPPTITVRQGTRVRIIVNRDLD 187
|
|
| VirB10_like |
cd16426 |
VirB10 and similar proteins form part of core complex in Type IV secretion system (T4SS); This ... |
852-1030 |
4.01e-22 |
|
VirB10 and similar proteins form part of core complex in Type IV secretion system (T4SS); This family contains VirB10, a component of the type IV secretion system (T4SS) and its homologs, including TraB, TraF, IcmE, and similar proteins. T4S system is employed by pathogenic bacteria to export virulence DNAs and/or proteins directly from the bacterial cytoplasm into the host cell. It forms a large multiprotein complex consisting of 12 proteins termed VirB1-11 and VirD4. VirB10 interacts with VirB7 and VirB9, forming the membrane-spanning 'core complex' (CC), around which all other components assemble. The CC is inserted in both the outer and inner membranes, playing a fundamental role as a scaffold for the rest of the T4SS components and actively participating in T4S substrate transfer through the bacterial envelope via conformational changes regulating channel opening and closing. In Gram-negative bacterial pathogen Helicobacter pylori, an important aetiological agent of gastroduodenal disease in humans, the comB3 gene encodes protein with best homologies to TraS/TraB from the Pseudomonas aeruginosa conjugative plasmid RP1 and TrbI of plasmid RP4 and VirB10 from the Ti plasmid of Agrobacterium tumefaciens, as well as DotG/IcmE of Legionella pneumophila.
Pssm-ID: 319754 [Multi-domain] Cd Length: 151 Bit Score: 93.76 E-value: 4.01e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501565288 852 IKAGTIMFAVLDTGINSDEKSPILATIVTGK----------LKGSKLIGDFS---RVDKKVLLKFNLLNVPSfDHTFGIN 918
Cdd:cd16426 1 LLPGTIIPAVLLTGIDSDLPGPVLARVTRDVydpnggrlliPKGSRLIGEYYgdlSSQERVLVRWTRLICPD-GVSIDLD 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501565288 919 AVAIDPDTARTAIAKSVNSHYLLRYGSLFASAFLSglsqgiiqsgstedcffgichrqysklntaqyialgmGNVGEQYa 998
Cdd:cd16426 80 SVAGADALGRAGLRGDVDNHFGERFGGALLASLLS-------------------------------------GQLAQQY- 121
|
170 180 190
....*....|....*....|....*....|..
gi 501565288 999 tvMGNNFNRAPTIRVPGGTGIGLLFMSDITLP 1030
Cdd:cd16426 122 --LQRAENIPPTITVNAGTRVNIVVARDVDLP 151
|
|
| VirB10 |
cd16429 |
VirB10 forms part of core complex in Type IV secretion system (T4SS); This family contains ... |
852-1030 |
5.21e-17 |
|
VirB10 forms part of core complex in Type IV secretion system (T4SS); This family contains VirB10, a component of the type IV secretion system (T4SS), including homologs TrbI, TraF, TrwE and TraL. T4S system is employed by pathogenic bacteria to export virulence DNAs and/or proteins directly from the bacterial cytoplasm into the host cell. It forms a large multiprotein complex consisting of 12 proteins termed VirB1-11 and VirD4. VirB10, interacts with VirB7 and VirB9, forming the membrane-spanning 'core complex' (CC), around which all other components assemble. The CC is inserted in both, the outer and inner membranes, playing a fundamental role as a scaffold for the rest of the T4SS components and actively participating in T4S substrate transfer through the bacterial envelope via conformational changes regulating channel opening and closing. TrwE in R33 plasmid has been shown to be anchored to the inner membrane and its C-terminal is necessary for conjugation; the transmembrane domains of TrwB and TrwE are involved in TrwB-TrwE interactions. TraF protein of the RP4 plasmid is involved in circularization of pilin subunits of P-type pili. In gonococcal genetic island (GGI) of Neisseria gonorrhoeae, T4SS encodes TrbI and circularization occurs via a covalent intermediate between the C terminus of putative pilin protein TraA and TrbI.
Pssm-ID: 319755 Cd Length: 180 Bit Score: 79.85 E-value: 5.21e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501565288 852 IKAGTIMFAVLDTGINSDEKSPILATI------VTGKL----KGSKLIG----DFSRVDKKVLLKFNLLNVPSfdhtfGI 917
Cdd:cd16429 1 LPAGTVIPAVLETAINSDLPGQVRAQVtrdvydSTGRVllipKGSRLIGeynsGVAQGQSRVFVVWTRLITPD-----GV 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501565288 918 -----NAVAIDPdTARTAIAKSVNSHYLLRYGSLFASAFLSGLSQGIIQSGSTEDcffgichrqysklNTAQYIALGMGN 992
Cdd:cd16429 76 sidldSMPGADA-LGRAGLKGDVDNHFWERFGGALLLSLISDGAQAASSSASNSN-------------SAGQAAGSNTGQ 141
|
170 180 190
....*....|....*....|....*....|....*....
gi 501565288 993 VGEQYA-TVMGNNFNRAPTIRVPGGTGIGLLFMSDITLP 1030
Cdd:cd16429 142 SLGQVAsQILERNLNIPPTITIRQGTRINIFVARDLDFS 180
|
|
| Pentapeptide_4 |
pfam13599 |
Pentapeptide repeats (9 copies); |
280-357 |
7.49e-16 |
|
Pentapeptide repeats (9 copies);
Pssm-ID: 433339 [Multi-domain] Cd Length: 78 Bit Score: 73.08 E-value: 7.49e-16
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 501565288 280 AELRQKGCGLAALKAAGFTAAELKDAGFTAAQLKAAGFSAKDLKAAGFTAAQLKAAGFSAKDLKSAGFSAVALKQAGF 357
Cdd:pfam13599 1 ADFTRCSFEGCKLSGTEFYHATLKDCNFTECNLVNVNFDDCNLRDVDFLEAQLKNAQFSGCNLKNSNFSDVKLKGADF 78
|
|
| YjbI |
COG1357 |
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown]; |
290-490 |
9.67e-13 |
|
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
Pssm-ID: 440968 [Multi-domain] Cd Length: 178 Bit Score: 67.66 E-value: 9.67e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501565288 290 AALKAAGFTAAELKDAGFTAAQLKAAgFSAKDLKAAGFTAAQLKAAGFSAKDLKSAGFSAVALKQAGFSNADLKDAGFSp 369
Cdd:COG1357 5 ADLSGADLSGADLSGADLSGANLSGA-LSGANLSGANLSGANLTGANLSGADLSGADLSGANLSGADLSGANLTGADLS- 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501565288 370 eqiQAADKVAKVCDvealkaaraqgisakelkekgcglaaLKAAGFTAAELKDAGFTAAQLKGAGFSAADLKAAGFSAAQ 449
Cdd:COG1357 83 ---GANLANLSGAN--------------------------LSGANLSGANLRGANLSGANLSGADLSGADLSGANLSGAD 133
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 501565288 450 LKAAGFSAKALKAAgfsahDLATAGFNASQLKDAGFTADDL 490
Cdd:COG1357 134 LSGANLSGANLSGA-----DLSGADLSGANLSGANLSGANL 169
|
|
| YjbI |
COG1357 |
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown]; |
415-631 |
1.12e-12 |
|
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
Pssm-ID: 440968 [Multi-domain] Cd Length: 178 Bit Score: 67.27 E-value: 1.12e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501565288 415 FTAAELKDAGFTAAQLKGAGFSAADLKAAgFSAAQLKAAGFSAKALKAAGFSAHDLATAGFNASQLKDAGFTADDLKAAG 494
Cdd:COG1357 2 LSGADLSGADLSGADLSGADLSGANLSGA-LSGANLSGANLSGANLTGANLSGADLSGADLSGANLSGADLSGANLTGAD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501565288 495 FSDqalsaagfppssgdcsvkalkkARMAGISAtelkekgcglAALKAAGFTAAELKSAGFTAAQLKAAGFSAKDLKGAG 574
Cdd:COG1357 81 LSG----------------------ANLANLSG----------ANLSGANLSGANLRGANLSGANLSGADLSGADLSGAN 128
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 501565288 575 FSAAELKAAGFGAKDLKDAgysaqDLKAAGFSAAQLKDAGFDAQALkdAGFSAADLK 631
Cdd:COG1357 129 LSGADLSGANLSGANLSGA-----DLSGADLSGANLSGANLSGANL--ANLEGADLK 178
|
|
| Pentapeptide_4 |
pfam13599 |
Pentapeptide repeats (9 copies); |
399-475 |
4.00e-12 |
|
Pentapeptide repeats (9 copies);
Pssm-ID: 433339 [Multi-domain] Cd Length: 78 Bit Score: 62.68 E-value: 4.00e-12
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 501565288 399 ELKEKGCGLAALKAAGFTAAELKDAGFTAAQLKGAGFSAADLKAAGFSAAQLKAAGFSAKALKAAGFSAHDLATAGF 475
Cdd:pfam13599 2 DFTRCSFEGCKLSGTEFYHATLKDCNFTECNLVNVNFDDCNLRDVDFLEAQLKNAQFSGCNLKNSNFSDVKLKGADF 78
|
|
| YjbI |
COG1357 |
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown]; |
302-505 |
7.79e-11 |
|
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
Pssm-ID: 440968 [Multi-domain] Cd Length: 178 Bit Score: 61.88 E-value: 7.79e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501565288 302 LKDAGFTAAQLKAAGFSAKDLKAAGFTAAqLKAAGFSAKDLKSAGFSAVALKQAGFSNADLKDAGFSpeqiqaadkvakv 381
Cdd:COG1357 2 LSGADLSGADLSGADLSGADLSGANLSGA-LSGANLSGANLSGANLTGANLSGADLSGADLSGANLS------------- 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501565288 382 cdvealkaaRAQGISAKelkekgcglaaLKAAGFTAAELkdAGFTAAQLKGAGFSAADLKAAGFSAAQLKAAGFSAKALK 461
Cdd:COG1357 68 ---------GADLSGAN-----------LTGADLSGANL--ANLSGANLSGANLSGANLRGANLSGANLSGADLSGADLS 125
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 501565288 462 AAGFSAHDLATAGFNASQLKDAGFTADDLKAAGFSDQALSAAGF 505
Cdd:COG1357 126 GANLSGADLSGANLSGANLSGADLSGADLSGANLSGANLSGANL 169
|
|
| VirB10 |
COG2948 |
Type IV secretory pathway, VirB10 component [Intracellular trafficking, secretion, and ... |
764-1032 |
7.95e-11 |
|
Type IV secretory pathway, VirB10 component [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442191 [Multi-domain] Cd Length: 309 Bit Score: 64.59 E-value: 7.95e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501565288 764 INSDSPEARLRALQKLQQEQLNEQQRRDVEQQMQGQMSLQAQKLMAGwsnDSGQAYQVALQQPATTPVGGNVSSQQGAGA 843
Cdd:COG2948 41 LSTRGAQRRLQELEAARRSPLFVQGGGGAAAAQAAAAGAAGPAGAAG---AAGGSADPNGQDRKNAFLNQLQDTRTVSAR 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501565288 844 AAKPTGP--VIKAGTIMFAVLDTGINSDEKSPILATI------VTGKL----KGSKLIG----DFSRVDKKVLLKFNLLN 907
Cdd:COG2948 118 ATRLPDSpyLLPAGTVIPAVLETGINSDLPGQITAQVtedvysATGRVllipQGSRLIGeydsGVSFGQSRVLVVWTRLI 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501565288 908 VP---SFDHTfgiNAVAIDPdTARTAIAKSVNSHyllrYGSLFASAFLSGLSQGIIQSGSTEDcffgichrqysKLNTAQ 984
Cdd:COG2948 198 TPdgvSIDLD---SMPGTDA-LGRAGLEGQVDNH----WWERFGAALLLSLLGDGAELAASSD-----------EGDLST 258
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 501565288 985 YIALGMGNVGEQYAT-VMGNNFNRAPTIRVPGGTGIGLLFMSDITLPQP 1032
Cdd:COG2948 259 AIRENTAQSLSQAAQqILERNLNIPPTLTIRQGTRVRVIVARDLDFSSP 307
|
|
| YjbI |
COG1357 |
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown]; |
181-368 |
8.25e-11 |
|
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
Pssm-ID: 440968 [Multi-domain] Cd Length: 178 Bit Score: 61.88 E-value: 8.25e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501565288 181 ELKEVGYSAVELRKCGFSIAQLQAAgFSAKDLKAAGFTAAQLKAAGFSAGELADAGFTRDQIKAAGYSSAEMQAAgiqtN 260
Cdd:COG1357 6 DLSGADLSGADLSGADLSGANLSGA-LSGANLSGANLSGANLTGANLSGADLSGADLSGANLSGADLSGANLTGA----D 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501565288 261 NPDCDLAALKKARasgvtaaelrqkgcglaaLKAAGFTAAELKDAGFTAAQLKAAGFSAKDLKAAGFTAAQLKAAGFSAK 340
Cdd:COG1357 81 LSGANLANLSGAN------------------LSGANLSGANLRGANLSGANLSGADLSGADLSGANLSGADLSGANLSGA 142
|
170 180
....*....|....*....|....*...
gi 501565288 341 DLKSAGFSAVALKQAGFSNADLKDAGFS 368
Cdd:COG1357 143 NLSGADLSGADLSGANLSGANLSGANLA 170
|
|
| YjbI |
COG1357 |
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown]; |
517-686 |
1.26e-10 |
|
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
Pssm-ID: 440968 [Multi-domain] Cd Length: 178 Bit Score: 61.50 E-value: 1.26e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501565288 517 LKKARMAGISATELKEKGCGLAALKAAG-FTAAELKSAGFTAAQLKAAGFSAKDLKGAGFSAAELKAAGFGAKDLKDAGY 595
Cdd:COG1357 2 LSGADLSGADLSGADLSGADLSGANLSGaLSGANLSGANLSGANLTGANLSGADLSGADLSGANLSGADLSGANLTGADL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501565288 596 SAQDLkaAGFSAAQLKDAGFDAQALKDAGFSAADLKNAGFSAEALKNAGFSAAQLKAAGFSAGALKAAGFSASQLKAAGF 675
Cdd:COG1357 82 SGANL--ANLSGANLSGANLSGANLRGANLSGANLSGADLSGADLSGANLSGADLSGANLSGANLSGADLSGADLSGANL 159
|
170
....*....|.
gi 501565288 676 DAKALRDAGFS 686
Cdd:COG1357 160 SGANLSGANLA 170
|
|
| Pentapeptide_4 |
pfam13599 |
Pentapeptide repeats (9 copies); |
418-495 |
1.29e-10 |
|
Pentapeptide repeats (9 copies);
Pssm-ID: 433339 [Multi-domain] Cd Length: 78 Bit Score: 58.44 E-value: 1.29e-10
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 501565288 418 AELKDAGFTAAQLKGAGFSAADLKAAGFSAAQLKAAGFSAKALKAAGFSAHDLATAGFNASQLKDAGFTADDLKAAGF 495
Cdd:pfam13599 1 ADFTRCSFEGCKLSGTEFYHATLKDCNFTECNLVNVNFDDCNLRDVDFLEAQLKNAQFSGCNLKNSNFSDVKLKGADF 78
|
|
| Pentapeptide_4 |
pfam13599 |
Pentapeptide repeats (9 copies); |
300-376 |
1.40e-10 |
|
Pentapeptide repeats (9 copies);
Pssm-ID: 433339 [Multi-domain] Cd Length: 78 Bit Score: 58.44 E-value: 1.40e-10
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 501565288 300 AELKDAGFTAAQLKAAGFSAKDLKAAGFTAAQLKAAGFSAKDLKSAGFSAVALKQAGFSNADLKDAGFSPEQIQAAD 376
Cdd:pfam13599 1 ADFTRCSFEGCKLSGTEFYHATLKDCNFTECNLVNVNFDDCNLRDVDFLEAQLKNAQFSGCNLKNSNFSDVKLKGAD 77
|
|
| Pentapeptide_4 |
pfam13599 |
Pentapeptide repeats (9 copies); |
589-665 |
2.23e-10 |
|
Pentapeptide repeats (9 copies);
Pssm-ID: 433339 [Multi-domain] Cd Length: 78 Bit Score: 57.67 E-value: 2.23e-10
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 501565288 589 DLKDAGYSAQDLKAAGFSAAQLKDAGFDAQALKDAGFSAADLKNAGFSAEALKNAGFSAAQLKAAGFSAGALKAAGF 665
Cdd:pfam13599 2 DFTRCSFEGCKLSGTEFYHATLKDCNFTECNLVNVNFDDCNLRDVDFLEAQLKNAQFSGCNLKNSNFSDVKLKGADF 78
|
|
| YjbI |
COG1357 |
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown]; |
538-700 |
4.73e-10 |
|
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
Pssm-ID: 440968 [Multi-domain] Cd Length: 178 Bit Score: 59.57 E-value: 4.73e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501565288 538 AALKAAGFTAAELKSAGFTAAQLKAAgFSAKDLKGAGFSAAELKAAGFGAKDLKDAGYSAQDLKAAGFSAAQLKDAGF-- 615
Cdd:COG1357 5 ADLSGADLSGADLSGADLSGANLSGA-LSGANLSGANLSGANLTGANLSGADLSGADLSGANLSGADLSGANLTGADLsg 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501565288 616 -------DAQaLKDAGFSAADLKNAGFSAEALKNAGFSAAQLKAAGFSAGALKAAGFSASQLKAAGfdakaLRDAGFSAG 688
Cdd:COG1357 84 anlanlsGAN-LSGANLSGANLRGANLSGANLSGADLSGADLSGANLSGADLSGANLSGANLSGAD-----LSGADLSGA 157
|
170
....*....|..
gi 501565288 689 ELKAAGFSPEEL 700
Cdd:COG1357 158 NLSGANLSGANL 169
|
|
| Pentapeptide_4 |
pfam13599 |
Pentapeptide repeats (9 copies); |
578-655 |
6.73e-10 |
|
Pentapeptide repeats (9 copies);
Pssm-ID: 433339 [Multi-domain] Cd Length: 78 Bit Score: 56.51 E-value: 6.73e-10
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 501565288 578 AELKAAGFGAKDLKDAGYSAQDLKAAGFSAAQLKDAGFDAQALKDAGFSAADLKNAGFSAEALKNAGFSAAQLKAAGF 655
Cdd:pfam13599 1 ADFTRCSFEGCKLSGTEFYHATLKDCNFTECNLVNVNFDDCNLRDVDFLEAQLKNAQFSGCNLKNSNFSDVKLKGADF 78
|
|
| Pentapeptide_4 |
pfam13599 |
Pentapeptide repeats (9 copies); |
608-685 |
7.14e-10 |
|
Pentapeptide repeats (9 copies);
Pssm-ID: 433339 [Multi-domain] Cd Length: 78 Bit Score: 56.13 E-value: 7.14e-10
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 501565288 608 AQLKDAGFDAQALKDAGFSAADLKNAGFSAEALKNAGFSAAQLKAAGFSAGALKAAGFSASQLKAAGFDAKALRDAGF 685
Cdd:pfam13599 1 ADFTRCSFEGCKLSGTEFYHATLKDCNFTECNLVNVNFDDCNLRDVDFLEAQLKNAQFSGCNLKNSNFSDVKLKGADF 78
|
|
| Pentapeptide_4 |
pfam13599 |
Pentapeptide repeats (9 copies); |
529-605 |
1.33e-09 |
|
Pentapeptide repeats (9 copies);
Pssm-ID: 433339 [Multi-domain] Cd Length: 78 Bit Score: 55.36 E-value: 1.33e-09
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 501565288 529 ELKEKGCGLAALKAAGFTAAELKSAGFTAAQLKAAGFSAKDLKGAGFSAAELKAAGFGAKDLKDAGYSAQDLKAAGF 605
Cdd:pfam13599 2 DFTRCSFEGCKLSGTEFYHATLKDCNFTECNLVNVNFDDCNLRDVDFLEAQLKNAQFSGCNLKNSNFSDVKLKGADF 78
|
|
| Pentapeptide_4 |
pfam13599 |
Pentapeptide repeats (9 copies); |
548-625 |
1.67e-09 |
|
Pentapeptide repeats (9 copies);
Pssm-ID: 433339 [Multi-domain] Cd Length: 78 Bit Score: 55.36 E-value: 1.67e-09
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 501565288 548 AELKSAGFTAAQLKAAGFSAKDLKGAGFSAAELKAAGFGAKDLKDAGYSAQDLKAAGFSAAQLKDAGFDAQALKDAGF 625
Cdd:pfam13599 1 ADFTRCSFEGCKLSGTEFYHATLKDCNFTECNLVNVNFDDCNLRDVDFLEAQLKNAQFSGCNLKNSNFSDVKLKGADF 78
|
|
| Pentapeptide_4 |
pfam13599 |
Pentapeptide repeats (9 copies); |
296-367 |
1.74e-09 |
|
Pentapeptide repeats (9 copies);
Pssm-ID: 433339 [Multi-domain] Cd Length: 78 Bit Score: 55.36 E-value: 1.74e-09
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 501565288 296 GFTAAELKDAGFTAAQLKAAGFSAKDLKAAGFTAAQLKAAGFSAKDLKSAGFSAVALKQAGFSNADLKDAGF 367
Cdd:pfam13599 7 SFEGCKLSGTEFYHATLKDCNFTECNLVNVNFDDCNLRDVDFLEAQLKNAQFSGCNLKNSNFSDVKLKGADF 78
|
|
| Pentapeptide_4 |
pfam13599 |
Pentapeptide repeats (9 copies); |
599-675 |
2.24e-09 |
|
Pentapeptide repeats (9 copies);
Pssm-ID: 433339 [Multi-domain] Cd Length: 78 Bit Score: 54.97 E-value: 2.24e-09
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 501565288 599 DLKAAGFSAAQLKDAGFDAQALKDAGFSAADLKNAGFSAEALKNAGFSAAQLKAAGFSAGALKAAGFSASQLKAAGF 675
Cdd:pfam13599 2 DFTRCSFEGCKLSGTEFYHATLKDCNFTECNLVNVNFDDCNLRDVDFLEAQLKNAQFSGCNLKNSNFSDVKLKGADF 78
|
|
| YjbI |
COG1357 |
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown]; |
480-656 |
2.65e-09 |
|
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
Pssm-ID: 440968 [Multi-domain] Cd Length: 178 Bit Score: 57.64 E-value: 2.65e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501565288 480 LKDAGFTADDLKAAGFSDQALSAAGFppssgdcsVKALKKARMAGISATElkekgcglAALKAAGFTAAELKSAGFTAAQ 559
Cdd:COG1357 2 LSGADLSGADLSGADLSGADLSGANL--------SGALSGANLSGANLSG--------ANLTGANLSGADLSGADLSGAN 65
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501565288 560 LKAAGFSAKDLKGAGFSAAEL--------KAAGFGAKDLKDAGYSAQDLKAAGFSAAQLKDAGFDAQALKDAGFSAADLK 631
Cdd:COG1357 66 LSGADLSGANLTGADLSGANLanlsganlSGANLSGANLRGANLSGANLSGADLSGADLSGANLSGADLSGANLSGANLS 145
|
170 180
....*....|....*....|....*
gi 501565288 632 NAGFSAEALKNAGFSAAQLKAAGFS 656
Cdd:COG1357 146 GADLSGADLSGANLSGANLSGANLA 170
|
|
| Pentapeptide_4 |
pfam13599 |
Pentapeptide repeats (9 copies); |
182-245 |
2.86e-09 |
|
Pentapeptide repeats (9 copies);
Pssm-ID: 433339 [Multi-domain] Cd Length: 78 Bit Score: 54.59 E-value: 2.86e-09
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 501565288 182 LKEVGYSAVELRKCGFSIAQLQAAGFSAKDLKAAGFTAAQLKAAGFSAGELADAGFTRDQIKAA 245
Cdd:pfam13599 13 LSGTEFYHATLKDCNFTECNLVNVNFDDCNLRDVDFLEAQLKNAQFSGCNLKNSNFSDVKLKGA 76
|
|
| Pentapeptide_4 |
pfam13599 |
Pentapeptide repeats (9 copies); |
628-703 |
3.41e-09 |
|
Pentapeptide repeats (9 copies);
Pssm-ID: 433339 [Multi-domain] Cd Length: 78 Bit Score: 54.20 E-value: 3.41e-09
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 501565288 628 ADLKNAGFSAEALKNAGFSAAQLKAAGFSAGALKAAGFSASQLKAAGFDAKALRDAGFSAGELKAAGFSPEELRHA 703
Cdd:pfam13599 1 ADFTRCSFEGCKLSGTEFYHATLKDCNFTECNLVNVNFDDCNLRDVDFLEAQLKNAQFSGCNLKNSNFSDVKLKGA 76
|
|
| PRK15196 |
PRK15196 |
type III secretion system effector PipB2; |
407-592 |
4.67e-09 |
|
type III secretion system effector PipB2;
Pssm-ID: 185118 [Multi-domain] Cd Length: 350 Bit Score: 59.25 E-value: 4.67e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501565288 407 LAALKAAGFTAAELKDAGFTAAQLKGAGFSAADLKAAGFSAAQLKAAGFsakalKAAGFSAHDLATAGFNASQLKDA--- 483
Cdd:PRK15196 146 LTAQGGMNLKGAVLTGANLTAENLCDADLSGANLEGAVLFMADCEGANF-----KGANLSGTSLGDSNFKNACLEDSimc 220
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501565288 484 GFTADDLKAAGFSDQALSAAGFPPSSGDCSVKALKKARMAGisATELKEKGCGlAALKAAGFTAAELKSAGFTAAQLKAA 563
Cdd:PRK15196 221 GATLDHANLTGANLQHASLLGCSMIECNCSGANMDHTNLSG--ATLIRADMSG-ATLQGATIMAAIMEGAVLTRANLRKA 297
|
170 180
....*....|....*....|....*....
gi 501565288 564 GFSAKDLKGAGFSAAELKAAGFGAKDLKD 592
Cdd:PRK15196 298 SFISTNLDGADLAEANLNNTCFKDCTLTH 326
|
|
| Pentapeptide_4 |
pfam13599 |
Pentapeptide repeats (9 copies); |
620-695 |
8.80e-09 |
|
Pentapeptide repeats (9 copies);
Pssm-ID: 433339 [Multi-domain] Cd Length: 78 Bit Score: 53.05 E-value: 8.80e-09
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 501565288 620 LKDAGFSAADLKNAGFSAEALKNAGFSAAQLKAAGFSAGALKAAGFSASQLKAAGFDAKALRDAGFSAGELKAAGF 695
Cdd:pfam13599 3 FTRCSFEGCKLSGTEFYHATLKDCNFTECNLVNVNFDDCNLRDVDFLEAQLKNAQFSGCNLKNSNFSDVKLKGADF 78
|
|
| PRK15196 |
PRK15196 |
type III secretion system effector PipB2; |
302-486 |
9.77e-09 |
|
type III secretion system effector PipB2;
Pssm-ID: 185118 [Multi-domain] Cd Length: 350 Bit Score: 58.48 E-value: 9.77e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501565288 302 LKDAGFTAAQLKAAGFSAKDLKAAGFTAAQLKAAGFSAKDLKSAGFSAVALKQAGFSNADLKDAGFSPEQIQAADkvakv 381
Cdd:PRK15196 154 LKGAVLTGANLTAENLCDADLSGANLEGAVLFMADCEGANFKGANLSGTSLGDSNFKNACLEDSIMCGATLDHAN----- 228
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501565288 382 cdveaLKAARAQGIS--AKELKEKGCGLAALKAAGFTAAELKDAGFTAAQLKGAGFSAADLKAAGFSAAQLKAAGFSAKA 459
Cdd:PRK15196 229 -----LTGANLQHASllGCSMIECNCSGANMDHTNLSGATLIRADMSGATLQGATIMAAIMEGAVLTRANLRKASFISTN 303
|
170 180
....*....|....*....|....*..
gi 501565288 460 LKAAgfsahDLATAGFNASQLKDAGFT 486
Cdd:PRK15196 304 LDGA-----DLAEANLNNTCFKDCTLT 325
|
|
| YjbI |
COG1357 |
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown]; |
211-376 |
1.30e-08 |
|
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
Pssm-ID: 440968 [Multi-domain] Cd Length: 178 Bit Score: 55.72 E-value: 1.30e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501565288 211 DLKAAGFTAAQLKAAGFSAGELADAgFTRDQIKAAGYSSAEMQAAgiqtNNPDCDL--AALKKARASGvtaAELRQkgcg 288
Cdd:COG1357 6 DLSGADLSGADLSGADLSGANLSGA-LSGANLSGANLSGANLTGA----NLSGADLsgADLSGANLSG---ADLSG---- 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501565288 289 lAALKAAGFTAAELkdAGFTAAQLKAAGFSAKDLKAAGFTAAQLKAAGFSAKDLKSAGFSAVALKQAGFSNADLKDAGFS 368
Cdd:COG1357 74 -ANLTGADLSGANL--ANLSGANLSGANLSGANLRGANLSGANLSGADLSGADLSGANLSGADLSGANLSGANLSGADLS 150
|
....*...
gi 501565288 369 PEQIQAAD 376
Cdd:COG1357 151 GADLSGAN 158
|
|
| YjbI |
COG1357 |
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown]; |
555-703 |
1.32e-08 |
|
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
Pssm-ID: 440968 [Multi-domain] Cd Length: 178 Bit Score: 55.72 E-value: 1.32e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501565288 555 FTAAQLKAAGFSAKDLKGAGFSAAELKAAgFGAKDLKDAGYSAQDLKAAGFSAAQLKDAGFDAQALKDAGFSAADLKNAG 634
Cdd:COG1357 2 LSGADLSGADLSGADLSGADLSGANLSGA-LSGANLSGANLSGANLTGANLSGADLSGADLSGANLSGADLSGANLTGAD 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 501565288 635 FSAEALknAGFSAAQLKAAGFSAGALKAAGFSASQLKAAGFDAKALRDAGFSAGELKAAGFSPEELRHA 703
Cdd:COG1357 81 LSGANL--ANLSGANLSGANLSGANLRGANLSGANLSGADLSGADLSGANLSGADLSGANLSGANLSGA 147
|
|
| Pentapeptide_4 |
pfam13599 |
Pentapeptide repeats (9 copies); |
569-645 |
2.02e-08 |
|
Pentapeptide repeats (9 copies);
Pssm-ID: 433339 [Multi-domain] Cd Length: 78 Bit Score: 52.28 E-value: 2.02e-08
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 501565288 569 DLKGAGFSAAELKAAGFGAKDLKDAGYSAQDLKAAGFSAAQLKDAGFDAQALKDAGFSAADLKNAGFSAEALKNAGF 645
Cdd:pfam13599 2 DFTRCSFEGCKLSGTEFYHATLKDCNFTECNLVNVNFDDCNLRDVDFLEAQLKNAQFSGCNLKNSNFSDVKLKGADF 78
|
|
| Pentapeptide_4 |
pfam13599 |
Pentapeptide repeats (9 copies); |
428-505 |
1.65e-07 |
|
Pentapeptide repeats (9 copies);
Pssm-ID: 433339 [Multi-domain] Cd Length: 78 Bit Score: 49.58 E-value: 1.65e-07
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 501565288 428 AQLKGAGFSAADLKAAGFSAAQLKAAGFSAKALKAAGFSAHDLATAGFNASQLKDAGFTADDLKAAGFSDQALSAAGF 505
Cdd:pfam13599 1 ADFTRCSFEGCKLSGTEFYHATLKDCNFTECNLVNVNFDDCNLRDVDFLEAQLKNAQFSGCNLKNSNFSDVKLKGADF 78
|
|
| Pentapeptide_4 |
pfam13599 |
Pentapeptide repeats (9 copies); |
640-713 |
1.86e-07 |
|
Pentapeptide repeats (9 copies);
Pssm-ID: 433339 [Multi-domain] Cd Length: 78 Bit Score: 49.58 E-value: 1.86e-07
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 501565288 640 LKNAGFSAAQLKAAGFSAGALKAAGFSASQLKAAGFDAKALRDAGFSAGELKAAGFSPEELRHAGYSKGDLLRA 713
Cdd:pfam13599 3 FTRCSFEGCKLSGTEFYHATLKDCNFTECNLVNVNFDDCNLRDVDFLEAQLKNAQFSGCNLKNSNFSDVKLKGA 76
|
|
| PRK15196 |
PRK15196 |
type III secretion system effector PipB2; |
538-702 |
2.01e-07 |
|
type III secretion system effector PipB2;
Pssm-ID: 185118 [Multi-domain] Cd Length: 350 Bit Score: 54.24 E-value: 2.01e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501565288 538 AALKAAGFTAAELKSAGFTAAQLKAAGFSAKDLKGAGFSAAELKAAGFGAKDLKDAGYSAQDLKAAGFSAAQLKDAGFDA 617
Cdd:PRK15196 162 ANLTAENLCDADLSGANLEGAVLFMADCEGANFKGANLSGTSLGDSNFKNACLEDSIMCGATLDHANLTGANLQHASLLG 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501565288 618 QALKDAGFSAADLKNAGFSAEALKNAGFSAAQLKAAGFSAGALKAAGFSASQLKAAGFDAKALRDAGFSAGELKAAGFSP 697
Cdd:PRK15196 242 CSMIECNCSGANMDHTNLSGATLIRADMSGATLQGATIMAAIMEGAVLTRANLRKASFISTNLDGADLAEANLNNTCFKD 321
|
....*
gi 501565288 698 EELRH 702
Cdd:PRK15196 322 CTLTH 326
|
|
| PRK15196 |
PRK15196 |
type III secretion system effector PipB2; |
550-710 |
3.36e-07 |
|
type III secretion system effector PipB2;
Pssm-ID: 185118 [Multi-domain] Cd Length: 350 Bit Score: 53.47 E-value: 3.36e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501565288 550 LKSAGFTAAQLKAAGFSAKDLKGAGFSAAELKAAGFGAKDLKDAGYSAQDLKAAGFSAAQLKDAGFDAQALKDAGFSAAD 629
Cdd:PRK15196 154 LKGAVLTGANLTAENLCDADLSGANLEGAVLFMADCEGANFKGANLSGTSLGDSNFKNACLEDSIMCGATLDHANLTGAN 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501565288 630 LKNAGFSAEALKNAGFSAAQLKAAGFSAGALKAAGFSASQLKAAGFDAKALRDAGFSAGELKAAGFSPEELRHAGYSKGD 709
Cdd:PRK15196 234 LQHASLLGCSMIECNCSGANMDHTNLSGATLIRADMSGATLQGATIMAAIMEGAVLTRANLRKASFISTNLDGADLAEAN 313
|
.
gi 501565288 710 L 710
Cdd:PRK15196 314 L 314
|
|
| PRK15196 |
PRK15196 |
type III secretion system effector PipB2; |
420-612 |
4.34e-07 |
|
type III secretion system effector PipB2;
Pssm-ID: 185118 [Multi-domain] Cd Length: 350 Bit Score: 53.09 E-value: 4.34e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501565288 420 LKDAGFTAAQLKGAGFSAADLKAAGFSAAQLKAAGFSAKALKAAGFSAHDLATAGFNASQLKDA---GFTADDLKAAGFS 496
Cdd:PRK15196 154 LKGAVLTGANLTAENLCDADLSGANLEGAVLFMADCEGANFKGANLSGTSLGDSNFKNACLEDSimcGATLDHANLTGAN 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501565288 497 DQALSAAGfppssgdCSvkalkkarmagisateLKEKGCGLAALKAAGFTAAELKSAGFTAAQLKAAGFSAKDLKGAGFS 576
Cdd:PRK15196 234 LQHASLLG-------CS----------------MIECNCSGANMDHTNLSGATLIRADMSGATLQGATIMAAIMEGAVLT 290
|
170 180 190
....*....|....*....|....*....|....*.
gi 501565288 577 AAELKAAGFGAKDLKDAGYSAQDLKAAGFSAAQLKD 612
Cdd:PRK15196 291 RANLRKASFISTNLDGADLAEANLNNTCFKDCTLTH 326
|
|
| YjbI |
COG1357 |
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown]; |
569-713 |
1.07e-06 |
|
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
Pssm-ID: 440968 [Multi-domain] Cd Length: 178 Bit Score: 49.94 E-value: 1.07e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501565288 569 DLKGAGFSAAELKAAgfgakDLKDAGYSAQDLKAAgFSAAQLKDAGFDAQALKDAGFSAADLKNAGFSAEALKNAGFSAA 648
Cdd:COG1357 1 DLSGADLSGADLSGA-----DLSGADLSGANLSGA-LSGANLSGANLSGANLTGANLSGADLSGADLSGANLSGADLSGA 74
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 501565288 649 QLKAAGFSAGALkaAGFSASQLKAAGFDAKALRDAGFSAGELKAAGFSPEELRHAGYSKGDLLRA 713
Cdd:COG1357 75 NLTGADLSGANL--ANLSGANLSGANLSGANLRGANLSGANLSGADLSGADLSGANLSGADLSGA 137
|
|
| PRK13881 |
PRK13881 |
conjugal transfer protein TrbI; Provisional |
752-1032 |
1.15e-05 |
|
conjugal transfer protein TrbI; Provisional
Pssm-ID: 237541 Cd Length: 472 Bit Score: 49.00 E-value: 1.15e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501565288 752 GLNNSQSSAMPSINSDSPE-----ARLRALQKLQQEQLNEQQRRDVEQQ-MQGQMSLQAQKLMAGWSNDSGQAYQVALQQ 825
Cdd:PRK13881 162 RSNGSAPGGPSTYTGTPQTrdemlARIAAVRQQIDAQRSNDPTAAYQARlAQLRGMGVGGGMAAPAGGGMGAGGAPQLLQ 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501565288 826 PATTPVGGNVSSQQGAGAA-------AKPTGP----VIKAGTIMFAVLDTGINSDEKSPILATIV-------TGKL---- 883
Cdd:PRK13881 242 TSTSGGGRNSYAQFGGNGQgdrwkldSQPEAPrspfELRAGFVVPATLISGINSDLPGQIMAQVSqnvydtaTGKHllip 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501565288 884 KGSKLIG----DFSRVDKKVLLKFNLLNVPsfdhtfgiNAVAID------PDTARTA-IAKSVNSHYLlrygSLFASAFL 952
Cdd:PRK13881 322 QGSRLVGsyssDVAYGQARVLVAWQRIVFP--------DGKAMDigampgADSAGYAgFRDQVNNHYV----RIFGSAFL 389
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501565288 953 -SGLSQGIIQS-GSTEDCFFGICHRQYSKLNTaqyiALG--MGNVGEQyatVMGNNFNRAPTIRVPGGTGIGLLFMSDIT 1028
Cdd:PRK13881 390 mSGVTAGITYSqDQNQNNNGYGQPTASSALSE----ALGqqLGQVTAQ---LIAKNLNIAPTLEIRPGYRFNVIVTKDMT 462
|
....
gi 501565288 1029 LPQP 1032
Cdd:PRK13881 463 FSKP 466
|
|
| PRK15196 |
PRK15196 |
type III secretion system effector PipB2; |
181-376 |
1.93e-04 |
|
type III secretion system effector PipB2;
Pssm-ID: 185118 [Multi-domain] Cd Length: 350 Bit Score: 45.00 E-value: 1.93e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501565288 181 ELKEVGYSAVE------LRKCGFSIAQ----LQAAGfsAKDLKAAGFTAAQLKAAGFSAGELADAGFTRDQIKAAgyssa 250
Cdd:PRK15196 115 ETREIPLASFEkicralLFRCEFSLPQdsviLTAQG--GMNLKGAVLTGANLTAENLCDADLSGANLEGAVLFMA----- 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501565288 251 emqaagiqtnnpDCDLAALKKARASGVTAAELRQKG--------CGlAALKAAGFTAAELKDAGFTAAQLKAAGFSAKDL 322
Cdd:PRK15196 188 ------------DCEGANFKGANLSGTSLGDSNFKNacledsimCG-ATLDHANLTGANLQHASLLGCSMIECNCSGANM 254
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 501565288 323 KAAGFTAAQLKAAGFSAKDLKSAGFSAVALKQAGFSNADLKDAGFSPEQIQAAD 376
Cdd:PRK15196 255 DHTNLSGATLIRADMSGATLQGATIMAAIMEGAVLTRANLRKASFISTNLDGAD 308
|
|
| PRK09718 |
PRK09718 |
SopA family protein; |
589-700 |
1.96e-04 |
|
SopA family protein;
Pssm-ID: 182045 [Multi-domain] Cd Length: 512 Bit Score: 45.42 E-value: 1.96e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501565288 589 DLKDAGYSAQDLKAAGFSAAQLKDAGFDAQALKDAGFSAADLKNAGFSAEALKNAGFSAAQLKAAGFSAGALKAAGFSAS 668
Cdd:PRK09718 96 DLTSCHFKGDVISKVSFLSSNLQHVTFECKEIGDCNFTTAIVDNVIFKCRRLHNVIFIKASGEYVDFSKNILDTVDFSQS 175
|
90 100 110
....*....|....*....|....*....|..
gi 501565288 669 QLKAAGFDAKALRDAGFSAGELKAAGFSPEEL 700
Cdd:PRK09718 176 QLTHSNFRECQIRNSNFDNCYLYASHFTRAEF 207
|
|
| PRK15196 |
PRK15196 |
type III secretion system effector PipB2; |
195-352 |
3.93e-03 |
|
type III secretion system effector PipB2;
Pssm-ID: 185118 [Multi-domain] Cd Length: 350 Bit Score: 40.76 E-value: 3.93e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501565288 195 CG--FSIAQLQAAGFSAKDLKAAGFTAAQLKAAGFSAGELADA--------GFTRDQIKAAGYSSAEMQAAGIQTNNPDC 264
Cdd:PRK15196 170 CDadLSGANLEGAVLFMADCEGANFKGANLSGTSLGDSNFKNAcledsimcGATLDHANLTGANLQHASLLGCSMIECNC 249
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501565288 265 DLAALKKARASGVTaaelrqkgcglaaLKAAGFTAAELKDAGFTAAQLKAAGFSAKDLKAAGFTAAQLKAAGFSAKDLKS 344
Cdd:PRK15196 250 SGANMDHTNLSGAT-------------LIRADMSGATLQGATIMAAIMEGAVLTRANLRKASFISTNLDGADLAEANLNN 316
|
....*...
gi 501565288 345 AGFSAVAL 352
Cdd:PRK15196 317 TCFKDCTL 324
|
|
| |
