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Conserved domains on  [gi|501256392|ref|WP_012299410|]
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MULTISPECIES: D-cysteine desulfhydrase family protein [Clavibacter]

Protein Classification

D-cysteine desulfhydrase family protein( domain architecture ID 10012093)

D-cysteine desulfhydrase family protein such as D-cysteine desulfhydrase, which catalyzes the alpha,beta-elimination reaction of D-cysteine and of several D-cysteine derivatives.

EC:  4.4.1.-
Gene Ontology:  GO:0030170|GO:0016846

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PRK03910 PRK03910
D-cysteine desulfhydrase; Validated
1-305 5.35e-112

D-cysteine desulfhydrase; Validated


:

Pssm-ID: 179673  Cd Length: 331  Bit Score: 327.17  E-value: 5.35e-112
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392   1 MDERIRLWTDPTPVHPVPRLAEALGLhpeRLLMKRDDLIGWGGGGNKARKLEHSLGRAVARGATTVVTTGAAQSNHARMT 80
Cdd:PRK03910   5 RFPRLELAGLPTPLEPLPRLSAALGP---DIYIKRDDLTGLALGGNKTRKLEFLLADALAQGADTLITAGAIQSNHARQT 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392  81 AAAGASLGLDVVLVLEGHE------VAARGNVLLDGLFGARIEW-SGDEGAESRAASVVAELEGAGTRVHRVAFGGSDAH 153
Cdd:PRK03910  82 AAAAAKLGLKCVLLLENPVpteaenYLANGNVLLDDLFGAEIHVvPAGTDMDAQLEELAEELRAQGRRPYVIPVGGSNAL 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392 154 SVQGFVDAGHELTAQVGA----VDHVVVALGSGGTMAGLV---EALGPE-RVLGVHCGA--------VAEPRAVVAGFLT 217
Cdd:PRK03910 162 GALGYVACALEIAQQLAEggvdFDAVVVASGSGGTHAGLAaglAALGPDiPVIGVTVSRsaaeqepkVAKLAQATAELLG 241
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392 218 ErGTGIEAAALRIDADRVGPGYAHLTDEAREALVLVARTTGILLDPTYTARAAAGLAAAVGDGSIGADDRVVLWHSGGVP 297
Cdd:PRK03910 242 L-PTEIPRADIRLWDDYVGPGYGVPTDEMLEAVKLLARTEGILLDPVYTGKAMAGLIDLIRQGRFKKGGNVLFIHTGGAP 320

                 ....*...
gi 501256392 298 GLFGHADL 305
Cdd:PRK03910 321 ALFAYADA 328
 
Name Accession Description Interval E-value
PRK03910 PRK03910
D-cysteine desulfhydrase; Validated
1-305 5.35e-112

D-cysteine desulfhydrase; Validated


Pssm-ID: 179673  Cd Length: 331  Bit Score: 327.17  E-value: 5.35e-112
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392   1 MDERIRLWTDPTPVHPVPRLAEALGLhpeRLLMKRDDLIGWGGGGNKARKLEHSLGRAVARGATTVVTTGAAQSNHARMT 80
Cdd:PRK03910   5 RFPRLELAGLPTPLEPLPRLSAALGP---DIYIKRDDLTGLALGGNKTRKLEFLLADALAQGADTLITAGAIQSNHARQT 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392  81 AAAGASLGLDVVLVLEGHE------VAARGNVLLDGLFGARIEW-SGDEGAESRAASVVAELEGAGTRVHRVAFGGSDAH 153
Cdd:PRK03910  82 AAAAAKLGLKCVLLLENPVpteaenYLANGNVLLDDLFGAEIHVvPAGTDMDAQLEELAEELRAQGRRPYVIPVGGSNAL 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392 154 SVQGFVDAGHELTAQVGA----VDHVVVALGSGGTMAGLV---EALGPE-RVLGVHCGA--------VAEPRAVVAGFLT 217
Cdd:PRK03910 162 GALGYVACALEIAQQLAEggvdFDAVVVASGSGGTHAGLAaglAALGPDiPVIGVTVSRsaaeqepkVAKLAQATAELLG 241
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392 218 ErGTGIEAAALRIDADRVGPGYAHLTDEAREALVLVARTTGILLDPTYTARAAAGLAAAVGDGSIGADDRVVLWHSGGVP 297
Cdd:PRK03910 242 L-PTEIPRADIRLWDDYVGPGYGVPTDEMLEAVKLLARTEGILLDPVYTGKAMAGLIDLIRQGRFKKGGNVLFIHTGGAP 320

                 ....*...
gi 501256392 298 GLFGHADL 305
Cdd:PRK03910 321 ALFAYADA 328
Acd COG2515
1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase, PLP-dependent ACC family ...
4-304 5.09e-96

1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase, PLP-dependent ACC family [Amino acid transport and metabolism];


Pssm-ID: 442005 [Multi-domain]  Cd Length: 317  Bit Score: 286.31  E-value: 5.09e-96
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392   4 RIRLWTDPTPVHPVPRLAEALGLhpeRLLMKRDDLIGWGGGGNKARKLEHSLGRAVARGATTVVTTGAAQSNHARMTAAA 83
Cdd:COG2515    4 RLPLAFLPTPLQPLPRLSAALGV---ELWIKRDDLTGPAIGGNKTRKLEYLLADALAQGADTLVTFGGAQSNHARATAAA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392  84 GASLGLDVVLVLEGHEV-AARGNVLLDGLFGARIEWSGDE---GAESRAASVVAELEGAGTRVHRVAFGGSDAHSVQGFV 159
Cdd:COG2515   81 AAKLGLKCVLVLRGEEPtPLNGNLLLDRLLGAELHFVSRGeyrDRDEAMEAVAAELRARGGKPYVIPEGGSNPLGALGYV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392 160 DAGHELTAQVGAV----DHVVVALGSGGTMAGLVEAL----GPERVLGVHCGAVAEP-RAVVAGFLTERGT---GIEAAA 227
Cdd:COG2515  161 EAAAELAAQLAELgvdfDYIVVASGSGGTLAGLVAGLallgSDTRVIGISVLKGADFlRERVAELARATAAllgLVSRAD 240
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 501256392 228 LRIDADRVGPGYAHLTDEAREALVLVARTTGILLDPTYTARAAAGLAAAVGDGSIGADDRVVLWHSGGVPGLFGHAD 304
Cdd:COG2515  241 IELDDDYHGGGYGKPTPELIEAIRLFARTEGILLDPVYTGKAMAGLIDLIRKGRFPPGSRVLFIHTGGLPGLFGYAE 317
ACC_deam_rel TIGR01275
pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family; This model represents ...
11-304 1.74e-56

pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family; This model represents a family of pyridoxal phosphate-dependent enzymes closely related to (and often designated as putative examples of) 1-aminocyclopropane-1-carboxylate deaminase. It appears that members of this family include both D-cysteine desulfhydrase (EC 4.4.1.15) and 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7).


Pssm-ID: 273533 [Multi-domain]  Cd Length: 318  Bit Score: 185.01  E-value: 1.74e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392   11 PTPVHPVPRLAEALGLHperLLMKRDDLIGWGGGGNKARKLEHSLGRAVARGATTVVTTGAAQSNHARMTAAAGASLGLD 90
Cdd:TIGR01275   7 PTPIQYLPRLSDYLGRE---IYIKRDDLTGLAMGGNKIRKLEFLLADALRKGADTVITAGAIQSNHARATAAVAAKLGLH 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392   91 VVLVLEGHEVAA------RGNVLLDGLFGARI-EWSGDEGAESRA-ASVVAE-LEGAGTRVHRVAFGGSDAHSVQGFVDA 161
Cdd:TIGR01275  84 CVLLLRNPIGTTaenyllNGNLLLDDLFGAETrIESCEEYTDIDAqLEELAErLEKEGFKPYVIPVGGSNSLGALGYVEA 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392  162 GHELTAQVGAV---DHVVVALGSGGTMAGL---VEALGPE-RVLGVHCGAVAEPR-----AVVAGFLTERGTGIEAAALR 229
Cdd:TIGR01275 164 ALEIAQQLESEvkfDSIVVASGSGGTIAGLslgLSHLMPDvELVGVTVSRFVADQtdkfvNLVQAIAEGLELTVSAVIPL 243
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 501256392  230 IDaDRVGPGYAHLTDEAREALVLVARTTGILLDPTYTARAAAGLAAAVGDGSIGaDDRVVLWHSGGVPGLFGHAD 304
Cdd:TIGR01275 244 WD-DYFGPGYGVPTSEGMEIVKKVASLEGIILDPVYTGKAFYGLIDGIRKKEFG-DKPILFIHTGGIPGLFAYHD 316
ACCD cd06449
Aminocyclopropane-1-carboxylate deaminase (ACCD): Pyridoxal phosphate (PLP)-dependent enzyme ...
12-295 1.17e-49

Aminocyclopropane-1-carboxylate deaminase (ACCD): Pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of 1-aminocyclopropane-L-carboxylate (ACC), a precursor of the plant hormone ethylene, to alpha-ketobutyrate and ammonia.


Pssm-ID: 107210  Cd Length: 307  Bit Score: 166.83  E-value: 1.17e-49
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392  12 TPVHPVPRLAEALGLHPErLLMKRDDLI-GWGGGGNKARKLEHSLGRAVARGATTVVTTGAAQSNHARMTAAAGASLGLD 90
Cdd:cd06449    1 TPIQYLPRLSEHLGGKVE-IYAKRDDCNsGLAFGGNKIRKLEYLLPDALAKGADTLVTVGGIQSNHTRQVAAVAAKLGLK 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392  91 VVLVLEGHEVAAR------GNVLLDGLFGARIEW---SGDEGAESRAASVVAELEGAGTRVHRVAFGGSDaHSVQ--GFV 159
Cdd:cd06449   80 CVLVQENWVPYSDavydrvGNILLSRIMGADVRLvsaGFDIGIRKSFEEAAEEVEAKGGKPYVIPAGGSE-HPLGglGYV 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392 160 DAGHELTAQ----VGAVDHVVVALGSGGTMAGLV---EALGPE-RVLGVHCGAVAEP------RAVVAGfLTERGTGIEA 225
Cdd:cd06449  159 GFVLEIAQQeeelGFKFDSIVVCSVTGSTHAGLSvglAALGRQrRVIGIDASAKPEKtkaqvlRIAQAK-LAEEGLEVKE 237
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392 226 AALRIDADRVGPGYAHLTDEAREALVLVARTTGILLDPTYTARAAAGLAAAVGDGSIGADDRVVLWHSGG 295
Cdd:cd06449  238 EDVVLDDDYAAPEYGIPNDETIEAIKLCARLEGIITDPVYEGKSMQGMIDLVRNGEFKEGSKVLFIHLGG 307
PALP pfam00291
Pyridoxal-phosphate dependent enzyme; Members of this family are all pyridoxal-phosphate ...
11-294 1.76e-30

Pyridoxal-phosphate dependent enzyme; Members of this family are all pyridoxal-phosphate dependent enzymes. This family includes: serine dehydratase EC:4.2.1.13 P20132, threonine dehydratase EC:4.2.1.16, tryptophan synthase beta chain EC:4.2.1.20, threonine synthase EC:4.2.99.2, cysteine synthase EC:4.2.99.8 P11096, cystathionine beta-synthase EC:4.2.1.22, 1-aminocyclopropane-1-carboxylate deaminase EC:4.1.99.4.


Pssm-ID: 459749 [Multi-domain]  Cd Length: 295  Bit Score: 116.26  E-value: 1.76e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392   11 PTPVHPVPRLAEALGLhpeRLLMKRDDLIGwgGGGNKARKLEHSLGRAVARGATTVVTTgAAQSNHARMTAAAGASLGLD 90
Cdd:pfam00291   7 PTPLVRLPRLSKELGV---DVYLKLESLNP--TGSFKDRGALNLLLRLKEGEGGKTVVE-ASSGNHGRALAAAAARLGLK 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392   91 VVLVLegHEVAARGNVLLDGLFGARIEWSGD--EGAESRAASVVAELEGAgTRVHrvafGGSDAHSVQGFVDAGHELTAQ 168
Cdd:pfam00291  81 VTIVV--PEDAPPGKLLLMRALGAEVVLVGGdyDEAVAAARELAAEGPGA-YYIN----QYDNPLNIEGYGTIGLEILEQ 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392  169 VG-AVDHVVVALGSGGTMAGLVEAL---GPE-RVLGVH-CGAVAEPRAVVAGFLTER------------GTGIEAAALRI 230
Cdd:pfam00291 154 LGgDPDAVVVPVGGGGLIAGIARGLkelGPDvRVIGVEpEGAPALARSLAAGRPVPVpvadtiadglgvGDEPGALALDL 233
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 501256392  231 DADRVGPGYAHLTDEAREALVLVARTTGILLDPtyTARAAAGLAAAVGDGSIGADDRVVLWHSG 294
Cdd:pfam00291 234 LDEYVGEVVTVSDEEALEAMRLLARREGIVVEP--SSAAALAALKLALAGELKGGDRVVVVLTG 295
 
Name Accession Description Interval E-value
PRK03910 PRK03910
D-cysteine desulfhydrase; Validated
1-305 5.35e-112

D-cysteine desulfhydrase; Validated


Pssm-ID: 179673  Cd Length: 331  Bit Score: 327.17  E-value: 5.35e-112
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392   1 MDERIRLWTDPTPVHPVPRLAEALGLhpeRLLMKRDDLIGWGGGGNKARKLEHSLGRAVARGATTVVTTGAAQSNHARMT 80
Cdd:PRK03910   5 RFPRLELAGLPTPLEPLPRLSAALGP---DIYIKRDDLTGLALGGNKTRKLEFLLADALAQGADTLITAGAIQSNHARQT 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392  81 AAAGASLGLDVVLVLEGHE------VAARGNVLLDGLFGARIEW-SGDEGAESRAASVVAELEGAGTRVHRVAFGGSDAH 153
Cdd:PRK03910  82 AAAAAKLGLKCVLLLENPVpteaenYLANGNVLLDDLFGAEIHVvPAGTDMDAQLEELAEELRAQGRRPYVIPVGGSNAL 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392 154 SVQGFVDAGHELTAQVGA----VDHVVVALGSGGTMAGLV---EALGPE-RVLGVHCGA--------VAEPRAVVAGFLT 217
Cdd:PRK03910 162 GALGYVACALEIAQQLAEggvdFDAVVVASGSGGTHAGLAaglAALGPDiPVIGVTVSRsaaeqepkVAKLAQATAELLG 241
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392 218 ErGTGIEAAALRIDADRVGPGYAHLTDEAREALVLVARTTGILLDPTYTARAAAGLAAAVGDGSIGADDRVVLWHSGGVP 297
Cdd:PRK03910 242 L-PTEIPRADIRLWDDYVGPGYGVPTDEMLEAVKLLARTEGILLDPVYTGKAMAGLIDLIRQGRFKKGGNVLFIHTGGAP 320

                 ....*...
gi 501256392 298 GLFGHADL 305
Cdd:PRK03910 321 ALFAYADA 328
Acd COG2515
1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase, PLP-dependent ACC family ...
4-304 5.09e-96

1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase, PLP-dependent ACC family [Amino acid transport and metabolism];


Pssm-ID: 442005 [Multi-domain]  Cd Length: 317  Bit Score: 286.31  E-value: 5.09e-96
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392   4 RIRLWTDPTPVHPVPRLAEALGLhpeRLLMKRDDLIGWGGGGNKARKLEHSLGRAVARGATTVVTTGAAQSNHARMTAAA 83
Cdd:COG2515    4 RLPLAFLPTPLQPLPRLSAALGV---ELWIKRDDLTGPAIGGNKTRKLEYLLADALAQGADTLVTFGGAQSNHARATAAA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392  84 GASLGLDVVLVLEGHEV-AARGNVLLDGLFGARIEWSGDE---GAESRAASVVAELEGAGTRVHRVAFGGSDAHSVQGFV 159
Cdd:COG2515   81 AAKLGLKCVLVLRGEEPtPLNGNLLLDRLLGAELHFVSRGeyrDRDEAMEAVAAELRARGGKPYVIPEGGSNPLGALGYV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392 160 DAGHELTAQVGAV----DHVVVALGSGGTMAGLVEAL----GPERVLGVHCGAVAEP-RAVVAGFLTERGT---GIEAAA 227
Cdd:COG2515  161 EAAAELAAQLAELgvdfDYIVVASGSGGTLAGLVAGLallgSDTRVIGISVLKGADFlRERVAELARATAAllgLVSRAD 240
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 501256392 228 LRIDADRVGPGYAHLTDEAREALVLVARTTGILLDPTYTARAAAGLAAAVGDGSIGADDRVVLWHSGGVPGLFGHAD 304
Cdd:COG2515  241 IELDDDYHGGGYGKPTPELIEAIRLFARTEGILLDPVYTGKAMAGLIDLIRKGRFPPGSRVLFIHTGGLPGLFGYAE 317
ACC_deam_rel TIGR01275
pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family; This model represents ...
11-304 1.74e-56

pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family; This model represents a family of pyridoxal phosphate-dependent enzymes closely related to (and often designated as putative examples of) 1-aminocyclopropane-1-carboxylate deaminase. It appears that members of this family include both D-cysteine desulfhydrase (EC 4.4.1.15) and 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7).


Pssm-ID: 273533 [Multi-domain]  Cd Length: 318  Bit Score: 185.01  E-value: 1.74e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392   11 PTPVHPVPRLAEALGLHperLLMKRDDLIGWGGGGNKARKLEHSLGRAVARGATTVVTTGAAQSNHARMTAAAGASLGLD 90
Cdd:TIGR01275   7 PTPIQYLPRLSDYLGRE---IYIKRDDLTGLAMGGNKIRKLEFLLADALRKGADTVITAGAIQSNHARATAAVAAKLGLH 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392   91 VVLVLEGHEVAA------RGNVLLDGLFGARI-EWSGDEGAESRA-ASVVAE-LEGAGTRVHRVAFGGSDAHSVQGFVDA 161
Cdd:TIGR01275  84 CVLLLRNPIGTTaenyllNGNLLLDDLFGAETrIESCEEYTDIDAqLEELAErLEKEGFKPYVIPVGGSNSLGALGYVEA 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392  162 GHELTAQVGAV---DHVVVALGSGGTMAGL---VEALGPE-RVLGVHCGAVAEPR-----AVVAGFLTERGTGIEAAALR 229
Cdd:TIGR01275 164 ALEIAQQLESEvkfDSIVVASGSGGTIAGLslgLSHLMPDvELVGVTVSRFVADQtdkfvNLVQAIAEGLELTVSAVIPL 243
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 501256392  230 IDaDRVGPGYAHLTDEAREALVLVARTTGILLDPTYTARAAAGLAAAVGDGSIGaDDRVVLWHSGGVPGLFGHAD 304
Cdd:TIGR01275 244 WD-DYFGPGYGVPTSEGMEIVKKVASLEGIILDPVYTGKAFYGLIDGIRKKEFG-DKPILFIHTGGIPGLFAYHD 316
ACCD cd06449
Aminocyclopropane-1-carboxylate deaminase (ACCD): Pyridoxal phosphate (PLP)-dependent enzyme ...
12-295 1.17e-49

Aminocyclopropane-1-carboxylate deaminase (ACCD): Pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of 1-aminocyclopropane-L-carboxylate (ACC), a precursor of the plant hormone ethylene, to alpha-ketobutyrate and ammonia.


Pssm-ID: 107210  Cd Length: 307  Bit Score: 166.83  E-value: 1.17e-49
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392  12 TPVHPVPRLAEALGLHPErLLMKRDDLI-GWGGGGNKARKLEHSLGRAVARGATTVVTTGAAQSNHARMTAAAGASLGLD 90
Cdd:cd06449    1 TPIQYLPRLSEHLGGKVE-IYAKRDDCNsGLAFGGNKIRKLEYLLPDALAKGADTLVTVGGIQSNHTRQVAAVAAKLGLK 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392  91 VVLVLEGHEVAAR------GNVLLDGLFGARIEW---SGDEGAESRAASVVAELEGAGTRVHRVAFGGSDaHSVQ--GFV 159
Cdd:cd06449   80 CVLVQENWVPYSDavydrvGNILLSRIMGADVRLvsaGFDIGIRKSFEEAAEEVEAKGGKPYVIPAGGSE-HPLGglGYV 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392 160 DAGHELTAQ----VGAVDHVVVALGSGGTMAGLV---EALGPE-RVLGVHCGAVAEP------RAVVAGfLTERGTGIEA 225
Cdd:cd06449  159 GFVLEIAQQeeelGFKFDSIVVCSVTGSTHAGLSvglAALGRQrRVIGIDASAKPEKtkaqvlRIAQAK-LAEEGLEVKE 237
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392 226 AALRIDADRVGPGYAHLTDEAREALVLVARTTGILLDPTYTARAAAGLAAAVGDGSIGADDRVVLWHSGG 295
Cdd:cd06449  238 EDVVLDDDYAAPEYGIPNDETIEAIKLCARLEGIITDPVYEGKSMQGMIDLVRNGEFKEGSKVLFIHLGG 307
PRK14045 PRK14045
1-aminocyclopropane-1-carboxylate deaminase; Provisional
4-304 4.13e-44

1-aminocyclopropane-1-carboxylate deaminase; Provisional


Pssm-ID: 172537 [Multi-domain]  Cd Length: 329  Bit Score: 153.12  E-value: 4.13e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392   4 RIRLWTDPTPVHPVPRLAEALGLHperLLMKRDDLIGWGGGGNKARKLEHSLGRAVARGATTVVTTGAAQSNHARMTAAA 83
Cdd:PRK14045  14 RVELIPWETPIQYLPNISRELGAD---VYVKRDDLTGLGIGGNKIRKLEYLLGDALSRGADVVITVGAVHSNHAFVTGLA 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392  84 GASLGLDVVLVLEGHEVaARGNVLLDGLFG--ARIEWSGDEGAESRAASVVA-ELEGAGTRVHRVAFGGSDAHSVQGFVD 160
Cdd:PRK14045  91 AKKLGLDAVLVLRGKEE-LKGNYLLDKIMGieTRVYEAKDSFELMKYAEEVAeELKGEGRKPYIIPPGGASPVGTLGYVR 169
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392 161 AGHELTAQVGAV----DHVVVALGSGGTMAGLVEALG----PERVLGVHCGAVAEPRAVVAGFLTERGT---GIEAAALR 229
Cdd:PRK14045 170 AVGEIATQVKKLgvrfDSIVVAVGSGGTLAGLSLGLAilnaEWRVVGIAVGSFGEKMKEKVKNLVKKTKellGVKVKVQE 249
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 501256392 230 IDADRVGPG-YAHLTDEAREALVLVARTTGILLDPTYTARAAAGLAAAVGDGSIGadDRVVLWHSGGVPGLFGHAD 304
Cdd:PRK14045 250 PELYDYSFGeYGKITKEVAKLIRSVGTMEGLILDPVYTGKAFYGLMDLAKKGELG--EKILFIHTGGISGTFHYGD 323
PRK12390 PRK12390
1-aminocyclopropane-1-carboxylate deaminase; Provisional
3-303 5.63e-39

1-aminocyclopropane-1-carboxylate deaminase; Provisional


Pssm-ID: 183494  Cd Length: 337  Bit Score: 139.78  E-value: 5.63e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392   3 ERIRLWTDPTPVHPVPRLAEALGLHPErLLMKRDDL-IGWGGGGNKARKLEHSLGRAVARGATTVVTTGAAQSNHARMTA 81
Cdd:PRK12390   7 PRYPLTFGPTPIHPLKRLSAHLGGKVE-LYAKREDCnSGLAFGGNKTRKLEYLVPDALAQGADTLVSIGGVQSNHTRQVA 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392  82 AAGASLGLDVVLVLEG---HEVAAR---GNVLLDGLFGA--RIEWSG-DEGAESRAASVVAELEGAGTRVHRVAFGGSDa 152
Cdd:PRK12390  86 AVAAHLGMKCVLVQENwvnYEDAVYdrvGNILLSRIMGAdvRLVPDGfDIGIRKSWEDALEDVRAAGGKPYAIPAGASD- 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392 153 HSVQ--GFVDAGHELTAQ---VG-AVDHVVVALGSGGTMAGLV---EALG-PERVLGVHCGA-VAEPRAVVAGF------ 215
Cdd:PRK12390 165 HPLGglGFVGFAEEVRAQeaeLGfKFDYIVVCSVTGSTQAGMVvgfAADGrARRVIGIDASAkPEQTRAQVLRIarntae 244
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392 216 LTERGTGIEAAALRIDADRVGPGYAHLTDEAREALVLVARTTGILLDPTYTARAAAGLAAAVGDGSIGADDRVVLWHSGG 295
Cdd:PRK12390 245 LVELGRDITEDDVVLDERYAGPEYGLPNEGTLEAIRLCARLEGMLTDPVYEGKSMHGMIDLVRKGEFPEGSKVLYAHLGG 324

                 ....*...
gi 501256392 296 VPGLFGHA 303
Cdd:PRK12390 325 VPALNAYS 332
PALP pfam00291
Pyridoxal-phosphate dependent enzyme; Members of this family are all pyridoxal-phosphate ...
11-294 1.76e-30

Pyridoxal-phosphate dependent enzyme; Members of this family are all pyridoxal-phosphate dependent enzymes. This family includes: serine dehydratase EC:4.2.1.13 P20132, threonine dehydratase EC:4.2.1.16, tryptophan synthase beta chain EC:4.2.1.20, threonine synthase EC:4.2.99.2, cysteine synthase EC:4.2.99.8 P11096, cystathionine beta-synthase EC:4.2.1.22, 1-aminocyclopropane-1-carboxylate deaminase EC:4.1.99.4.


Pssm-ID: 459749 [Multi-domain]  Cd Length: 295  Bit Score: 116.26  E-value: 1.76e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392   11 PTPVHPVPRLAEALGLhpeRLLMKRDDLIGwgGGGNKARKLEHSLGRAVARGATTVVTTgAAQSNHARMTAAAGASLGLD 90
Cdd:pfam00291   7 PTPLVRLPRLSKELGV---DVYLKLESLNP--TGSFKDRGALNLLLRLKEGEGGKTVVE-ASSGNHGRALAAAAARLGLK 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392   91 VVLVLegHEVAARGNVLLDGLFGARIEWSGD--EGAESRAASVVAELEGAgTRVHrvafGGSDAHSVQGFVDAGHELTAQ 168
Cdd:pfam00291  81 VTIVV--PEDAPPGKLLLMRALGAEVVLVGGdyDEAVAAARELAAEGPGA-YYIN----QYDNPLNIEGYGTIGLEILEQ 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392  169 VG-AVDHVVVALGSGGTMAGLVEAL---GPE-RVLGVH-CGAVAEPRAVVAGFLTER------------GTGIEAAALRI 230
Cdd:pfam00291 154 LGgDPDAVVVPVGGGGLIAGIARGLkelGPDvRVIGVEpEGAPALARSLAAGRPVPVpvadtiadglgvGDEPGALALDL 233
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 501256392  231 DADRVGPGYAHLTDEAREALVLVARTTGILLDPtyTARAAAGLAAAVGDGSIGADDRVVLWHSG 294
Cdd:pfam00291 234 LDEYVGEVVTVSDEEALEAMRLLARREGIVVEP--SSAAALAALKLALAGELKGGDRVVVVLTG 295
Trp-synth-beta_II cd00640
Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP) ...
12-295 3.78e-16

Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehyd catalyzes the conversion of L- or D-serine to pyruvate and ammonia. Thr-dehyd is active as a homodimer and catalyzes the conversion of L-threonine to 2-oxobutanoate and ammonia. DAL is also a homodimer and catalyzes the alpha, beta-elimination reaction of both L- and D-alpha, beta-diaminopropionate to form pyruvate and ammonia. Thr-synth catalyzes the formation of threonine and inorganic phosphate from O-phosphohomoserine.


Pssm-ID: 107202 [Multi-domain]  Cd Length: 244  Bit Score: 76.40  E-value: 3.78e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392  12 TPVHPVPRLAEALGlhpERLLMKRDDLIGwgGGGNKARKLEHSLGRAVARG---ATTVVTtgAAQSNHARMTAAAGASLG 88
Cdd:cd00640    1 TPLVRLKRLSKLGG---ANIYLKLEFLNP--TGSFKDRGALNLILLAEEEGklpKGVIIE--STGGNTGIALAAAAARLG 73
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392  89 LDVVLVLEghEVAARGNVLLDGLFGARIEWSGD--EGAESRAASVVAELEGAGtrvhrVAFGGSDAHSVQGFVDAGHELT 166
Cdd:cd00640   74 LKCTIVMP--EGASPEKVAQMRALGAEVVLVPGdfDDAIALAKELAEEDPGAY-----YVNQFDNPANIAGQGTIGLEIL 146
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392 167 AQVG--AVDHVVVALGSGGTMAGLVEALgpervlgvhcgavaepravVAGFLTERGTGIEAAALRIDadrvgpgyahlTD 244
Cdd:cd00640  147 EQLGgqKPDAVVVPVGGGGNIAGIARAL-------------------KELLPNVKVIGVEPEVVTVS-----------DE 196
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|.
gi 501256392 245 EAREALVLVARTTGILLDPTyTARAAAGLAAAVGDGsiGADDRVVLWHSGG 295
Cdd:cd00640  197 EALEAIRLLAREEGILVEPS-SAAALAAALKLAKKL--GKGKTVVVILTGG 244
ThrC COG0498
Threonine synthase [Amino acid transport and metabolism]; Threonine synthase is part of the ...
2-290 1.10e-07

Threonine synthase [Amino acid transport and metabolism]; Threonine synthase is part of the Pathway/BioSystem: Threonine biosynthesis


Pssm-ID: 440264 [Multi-domain]  Cd Length: 394  Bit Score: 52.51  E-value: 1.10e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392   2 DERIRLWTDPTPVHPVPRLAEALGlhpERLLMKRDdligwggGGN-----KARKLEHSLGRAVARGATTVV--TTGaaqs 74
Cdd:COG0498   57 EKAVSLGEGGTPLVKAPRLADELG---KNLYVKEE-------GHNptgsfKDRAMQVAVSLALERGAKTIVcaSSG---- 122
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392  75 NHARMTAAAGASLGLDVVlVLEGHEVAARGNVLLDGLFGARiewsgdegaesraasvVAELEG----AGTRVHRVA--FG 148
Cdd:COG0498  123 NGSAALAAYAARAGIEVF-VFVPEGKVSPGQLAQMLTYGAH----------------VIAVDGnfddAQRLVKELAadEG 185
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392 149 GSDAHSVQ-GFVDA----GHELTAQVGAV-DHVVVALGSGGTMAGLVEALGPERVLGVH------CGAVAEPRA-VVAGF 215
Cdd:COG0498  186 LYAVNSINpARLEGqktyAFEIAEQLGRVpDWVVVPTGNGGNILAGYKAFKELKELGLIdrlprlIAVQATGCNpILTAF 265
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392 216 LTERGTgIE-------AAALRI-----------DADRVGPGYAHLTD-EAREALVLVARTTGILLDPTyTARAAAGLAAA 276
Cdd:COG0498  266 ETGRDE-YEperpetiAPSMDIgnpsngeralfALRESGGTAVAVSDeEILEAIRLLARREGIFVEPA-TAVAVAGLRKL 343
                        330
                 ....*....|....
gi 501256392 277 VGDGSIGADDRVVL 290
Cdd:COG0498  344 REEGEIDPDEPVVV 357
IlvA COG1171
Threonine deaminase [Amino acid transport and metabolism]; Threonine deaminase is part of the ...
3-200 2.27e-07

Threonine deaminase [Amino acid transport and metabolism]; Threonine deaminase is part of the Pathway/BioSystem: Isoleucine, leucine, valine biosynthesis


Pssm-ID: 440784 [Multi-domain]  Cd Length: 327  Bit Score: 51.58  E-value: 2.27e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392   3 ERIRLWTDPTPVHPVPRLAEALGLhpeRLLMKRDDL--IG---WGGGGNKARKLehslgrAVARGATTVVT--TGaaqsN 75
Cdd:COG1171   16 ARIAGVVRRTPLLRSPTLSERLGA---EVYLKLENLqpTGsfkLRGAYNALASL------SEEERARGVVAasAG----N 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392  76 HARMTAAAGASLGLDVVLVLegHEVAARGNVllDGL--FGARIEWSGDEGAESRAASV-VAELEGAgTRVHrvAFggSDA 152
Cdd:COG1171   83 HAQGVAYAARLLGIPATIVM--PETAPAVKV--AATraYGAEVVLHGDTYDDAEAAAAeLAEEEGA-TFVH--PF--DDP 153
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|..
gi 501256392 153 HSVQGFVDAGHELTAQVGAVDHVVVALGSGGTMAGL---VEALGPE-RVLGV 200
Cdd:COG1171  154 DVIAGQGTIALEILEQLPDLDAVFVPVGGGGLIAGVaaaLKALSPDiRVIGV 205
CBS_like cd01561
CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS ...
81-261 4.19e-05

CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.


Pssm-ID: 107204 [Multi-domain]  Cd Length: 291  Bit Score: 44.43  E-value: 4.19e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392  81 AAAGASLGLDVVLVLEghEVAARGNVLLDGLFGARIEWSGDEGAESraasvvaeLEGAGTRVHRVAFGGSDAHSVQGF-- 158
Cdd:cd01561   69 AMVAAAKGYRFIIVMP--ETMSEEKRKLLRALGAEVILTPEAEADG--------MKGAIAKARELAAETPNAFWLNQFen 138
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392 159 ---VDA-----GHELTAQV-GAVDHVVVALGSGGTMAGLVEALgPERVLGVHCGAVAEPRAVVAGFLTERGTGIEAaalr 229
Cdd:cd01561  139 panPEAhyettAPEIWEQLdGKVDAFVAGVGTGGTITGVARYL-KEKNPNVRIVGVDPVGSVLFSGGPPGPHKIEG---- 213
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|.
gi 501256392 230 IDADRVGP--------GYAHLTD-EAREALVLVARTTGILL 261
Cdd:cd01561  214 IGAGFIPEnldrslidEVVRVSDeEAFAMARRLAREEGLLV 254
Trp-synth_B cd06446
Tryptophan synthase-beta: Tryptophan synthase is a bifunctional enzyme that catalyses the ...
11-92 1.67e-04

Tryptophan synthase-beta: Tryptophan synthase is a bifunctional enzyme that catalyses the last two steps in the biosynthesis of L-tryptophan via its alpha and beta reactions. In the alpha reaction, indole 3-glycerol phosphate is cleaved reversibly to glyceraldehyde 3-phosphate and indole at the active site of the alpha subunit. In the beta reaction, indole undergoes a PLP-dependent reaction with L-serine to form L-tryptophan at the active site of the beta subunit. Members of this CD, Trp-synth_B, are found in all three major phylogenetic divisions.


Pssm-ID: 107207  Cd Length: 365  Bit Score: 42.91  E-value: 1.67e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392  11 PTPVHPVPRLAEALGlhPERLLMKRDDLIGWGgggnkARKLEHSLGRA-VAR--GATTVVT-TGAAQsnHARMTAAAGAS 86
Cdd:cd06446   34 PTPLYRAKRLSEYLG--GAKIYLKREDLNHTG-----AHKINNALGQAlLAKrmGKKRVIAeTGAGQ--HGVATATACAL 104

                 ....*.
gi 501256392  87 LGLDVV 92
Cdd:cd06446  105 FGLECE 110
Thr-synth_1 cd01563
Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last ...
12-290 2.25e-04

Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last reaction in the synthesis of threonine from aspartate. It proceeds by converting O-phospho-L-homoserine (OPH) into threonine and inorganic phosphate. In plants, OPH is an intermediate between the methionine and threonine/isoleucine pathways. Thus threonine synthase competes for OPH with cystathionine-gamma-synthase, the first enzyme in the methionine pathway. These enzymes are in general dimers. Members of this CD, Thr-synth_1, are widely distributed in bacteria, archaea and higher plants.


Pssm-ID: 107206 [Multi-domain]  Cd Length: 324  Bit Score: 42.20  E-value: 2.25e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392  12 TPVHPVPRLAEALGLhpERLLMKRDdligwggGGN-----KARKLEHSLGRAVARGATTVV--TTGaaqsNHARMTAAAG 84
Cdd:cd01563   23 TPLVRAPRLGERLGG--KNLYVKDE-------GLNptgsfKDRGMTVAVSKAKELGVKAVAcaSTG----NTSASLAAYA 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392  85 ASLGLD-VVLVLEGhevAARGNVLLDGLFGAR-IEWSGDEGAESRAASVVAElEGAGTRVHRVafggsDAHSVQGFVDAG 162
Cdd:cd01563   90 ARAGIKcVVFLPAG---KALGKLAQALAYGATvLAVEGNFDDALRLVRELAE-ENWIYLSNSL-----NPYRLEGQKTIA 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392 163 HELTAQVG--AVDHVVVALGSGGTM------------AGLVEALgPeRVLGV---HCGAVAepRAVVAGF-LTERGTGIE 224
Cdd:cd01563  161 FEIAEQLGweVPDYVVVPVGNGGNItaiwkgfkelkeLGLIDRL-P-RMVGVqaeGAAPIV--RAFKEGKdDIEPVENPE 236
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392 225 --AAALRI----------DADRVGPGYA-HLTDEA-REALVLVARTTGILLDPTyTARAAAGLAAAVGDGSIGADDRVVL 290
Cdd:cd01563  237 tiATAIRIgnpasgpkalRAVRESGGTAvAVSDEEiLEAQKLLARTEGIFVEPA-SAASLAGLKKLREEGIIDKGERVVV 315
PRK08246 PRK08246
serine/threonine dehydratase;
3-200 8.73e-04

serine/threonine dehydratase;


Pssm-ID: 181319 [Multi-domain]  Cd Length: 310  Bit Score: 40.32  E-value: 8.73e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392   3 ERIRLWTDPTPVHPvprlAEALGLHPERLLMKRDDLigWGGGGNKARKlehSLGRAVARGATTVVTTGAAQSNHARMTAA 82
Cdd:PRK08246  15 QRIAPHIRRTPVLE----ADGAGFGPAPVWLKLEHL--QHTGSFKARG---AFNRLLAAPVPAAGVVAASGGNAGLAVAY 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392  83 AGASLGLDVVLVLEGHEVAARGNVLLDglFGARIEWSGDEGAESRAASVVAELEGAGTRVHrvAFGGSDAHSVQGFVdaG 162
Cdd:PRK08246  86 AAAALGVPATVFVPETAPPAKVARLRA--LGAEVVVVGAEYADALEAAQAFAAETGALLCH--AYDQPEVLAGAGTL--G 159
                        170       180       190
                 ....*....|....*....|....*....|....*....
gi 501256392 163 HELTAQVGAVDHVVVALGSGGTMAGLVEALGPE-RVLGV 200
Cdd:PRK08246 160 LEIEEQAPGVDTVLVAVGGGGLIAGIAAWFEGRaRVVAV 198
CysK COG0031
Cysteine synthase [Amino acid transport and metabolism]; Cysteine synthase is part of the ...
81-208 5.34e-03

Cysteine synthase [Amino acid transport and metabolism]; Cysteine synthase is part of the Pathway/BioSystem: Cysteine biosynthesis


Pssm-ID: 439802 [Multi-domain]  Cd Length: 301  Bit Score: 37.72  E-value: 5.34e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501256392  81 AAAGASLGLDVVLVLEGHEVAARGNVLLdgLFGARIEW----SGDEGAESRAASVVAELEG----------AGTRVHRVA 146
Cdd:COG0031   80 AMVAAAKGYRLILVMPETMSKERRALLR--AYGAEVVLtpgaEGMKGAIDKAEELAAETPGafwpnqfenpANPEAHYET 157
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 501256392 147 FGGsdahsvqgfvdaghELTAQV-GAVDHVVVALGSGGTMAGLVEALGpERVLGVHCGAVaEP 208
Cdd:COG0031  158 TGP--------------EIWEQTdGKVDAFVAGVGTGGTITGVGRYLK-ERNPDIKIVAV-EP 204
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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