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Conserved domains on  [gi|501085196|ref|WP_012135666|]
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MULTISPECIES: cellulose biosynthesis protein BcsF [Citrobacter]

Protein Classification

cellulose biosynthesis protein BcsF( domain architecture ID 10022484)

cellulose biosynthesis protein BcsF is an inner membrane protein that may act at the early stages of Bcs macrocomplex assembly as a membrane triggering factor

Gene Symbol:  bcsF
Gene Ontology:  GO:0030244|GO:0016020
PubMed:  26077867

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
cellullose_BcsF TIGR03493
celllulose biosynthesis operon protein BcsF/YhjT; Members of this protein family are found ...
 2-63 1.77e-24

celllulose biosynthesis operon protein BcsF/YhjT; Members of this protein family are found invariably together with genes of bacterial cellulose biosynthesis, and are presumed to be involved in the process. Members average about 63 amino acids in length and are not uncharacterized. The gene has been designated both YhjT and BcsF (bacterial cellulose synthesis F). [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]


:

Pssm-ID: 274605  Cd Length: 62  Bit Score: 85.97  E-value: 1.77e-24
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 501085196   2 MNVNDIIQIIVFCALIFFPLGYLARHSLRRIRNTARLLFARPRYVKPAGTLRRATNVKADKK 63
Cdd:TIGR03493  1 MNISDILQLVLLCALVFFPLGYLARRSLRRIRDTLRLRLAKPRYLKPAGVLRRAAKQEATKK 62
 
Name Accession Description Interval E-value
cellullose_BcsF TIGR03493
celllulose biosynthesis operon protein BcsF/YhjT; Members of this protein family are found ...
 2-63 1.77e-24

celllulose biosynthesis operon protein BcsF/YhjT; Members of this protein family are found invariably together with genes of bacterial cellulose biosynthesis, and are presumed to be involved in the process. Members average about 63 amino acids in length and are not uncharacterized. The gene has been designated both YhjT and BcsF (bacterial cellulose synthesis F). [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]


Pssm-ID: 274605  Cd Length: 62  Bit Score: 85.97  E-value: 1.77e-24
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 501085196   2 MNVNDIIQIIVFCALIFFPLGYLARHSLRRIRNTARLLFARPRYVKPAGTLRRATNVKADKK 63
Cdd:TIGR03493  1 MNISDILQLVLLCALVFFPLGYLARRSLRRIRDTLRLRLAKPRYLKPAGVLRRAAKQEATKK 62
CBP_BcsF pfam11120
Cellulose biosynthesis protein BcsF; CBP_BcsF is a family of bacterial cellulose biosynthesis ...
 2-61 1.34e-23

Cellulose biosynthesis protein BcsF; CBP_BcsF is a family of bacterial cellulose biosynthesis proteins. Cellulose is necessary for biofilm formation in bacteria. (Roemling U. and Galperin M.Y. "Bacterial cellulose biosynthesis. Diversity of operons and subunits" (manuscript in preparation)).


Pssm-ID: 431667  Cd Length: 60  Bit Score: 83.73  E-value: 1.34e-23
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 501085196   2 MNVNDIIQIIVFCALIFFPLGYLARHSLRRIRNTARLLFARPRYVKPAGTLRRATNVKAD 61
Cdd:pfam11120  1 MNISDIVQIVLICALIFFPLGYLARRSLRRIRDTLRLRLAKPRYLKPAGVLRRAAKQTAT 60
 
Name Accession Description Interval E-value
cellullose_BcsF TIGR03493
celllulose biosynthesis operon protein BcsF/YhjT; Members of this protein family are found ...
 2-63 1.77e-24

celllulose biosynthesis operon protein BcsF/YhjT; Members of this protein family are found invariably together with genes of bacterial cellulose biosynthesis, and are presumed to be involved in the process. Members average about 63 amino acids in length and are not uncharacterized. The gene has been designated both YhjT and BcsF (bacterial cellulose synthesis F). [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]


Pssm-ID: 274605  Cd Length: 62  Bit Score: 85.97  E-value: 1.77e-24
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 501085196   2 MNVNDIIQIIVFCALIFFPLGYLARHSLRRIRNTARLLFARPRYVKPAGTLRRATNVKADKK 63
Cdd:TIGR03493  1 MNISDILQLVLLCALVFFPLGYLARRSLRRIRDTLRLRLAKPRYLKPAGVLRRAAKQEATKK 62
CBP_BcsF pfam11120
Cellulose biosynthesis protein BcsF; CBP_BcsF is a family of bacterial cellulose biosynthesis ...
 2-61 1.34e-23

Cellulose biosynthesis protein BcsF; CBP_BcsF is a family of bacterial cellulose biosynthesis proteins. Cellulose is necessary for biofilm formation in bacteria. (Roemling U. and Galperin M.Y. "Bacterial cellulose biosynthesis. Diversity of operons and subunits" (manuscript in preparation)).


Pssm-ID: 431667  Cd Length: 60  Bit Score: 83.73  E-value: 1.34e-23
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 501085196   2 MNVNDIIQIIVFCALIFFPLGYLARHSLRRIRNTARLLFARPRYVKPAGTLRRATNVKAD 61
Cdd:pfam11120  1 MNISDIVQIVLICALIFFPLGYLARRSLRRIRDTLRLRLAKPRYLKPAGVLRRAAKQTAT 60
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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