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Conserved domains on  [gi|499501831|ref|WP_011188471|]
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phosphate ABC transporter permease PstA [Desulfotalea psychrophila]

Protein Classification

PstA family ABC transporter permease( domain architecture ID 11426443)

PstA family ABC transporter permease is the transmembrane subunit (TM) found in periplasmic binding protein (PBP)-dependent ATP-binding cassette (ABC) transporters; similar to phosphate transport system permease protein PstA

Gene Ontology:  GO:0140359|GO:0042626|GO:0043190|GO:0016020
PubMed:  25750732|24638992|18535149|17723295
TCDB:  3.A.1

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PstA COG0581
ABC-type phosphate transport system, permease component [Inorganic ion transport and ...
 27-251 2.37e-58

ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism];


:

Pssm-ID: 440346 [Multi-domain]  Cd Length: 259  Bit Score: 187.17  E-value: 2.37e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499501831  27 IIGYLFHQGGAFLNSRTLFGEVGAvdallfhRQVFDGLFPALMGTFALVLLAVLLAIPIGIAAGIYMAEYAR-GKTKIFF 105
Cdd:COG0581    9 ILGTVLVKGLPALSWEFLTSSPSP-------GPEGGGILPAIVGTLLLVLLATLIAVPLGVLAAIYLAEYARgGRLARLI 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499501831 106 SLLFDILAGLPSIVIGLAGFSITILLHKMfpgriGPCLLLSAASLAFLILPYLIRTCQAALESVPQTLRQTAPALGASKI 185
Cdd:COG0581   82 RFAIDVLAGVPSIVYGLFGYALFVLTLGL-----GFSLLAGALALALLMLPVVIRTTEEALRLVPNSLREASYALGATKW 156

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 499501831 186 QNILQVLLPSKLPDILGGIILAIGRAAEDTAVIMLTGAVaSAGMIRSLFEQFEALPFYIYYISSQY 251
Cdd:COG0581  157 QTIRKVVLPAALPGILTGVILAIARAAGETAPLLFTAGV-SPFLPLSLFDPFATLPVHIYNLASSP 221
 
Name Accession Description Interval E-value
PstA COG0581
ABC-type phosphate transport system, permease component [Inorganic ion transport and ...
 27-251 2.37e-58

ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440346 [Multi-domain]  Cd Length: 259  Bit Score: 187.17  E-value: 2.37e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499501831  27 IIGYLFHQGGAFLNSRTLFGEVGAvdallfhRQVFDGLFPALMGTFALVLLAVLLAIPIGIAAGIYMAEYAR-GKTKIFF 105
Cdd:COG0581    9 ILGTVLVKGLPALSWEFLTSSPSP-------GPEGGGILPAIVGTLLLVLLATLIAVPLGVLAAIYLAEYARgGRLARLI 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499501831 106 SLLFDILAGLPSIVIGLAGFSITILLHKMfpgriGPCLLLSAASLAFLILPYLIRTCQAALESVPQTLRQTAPALGASKI 185
Cdd:COG0581   82 RFAIDVLAGVPSIVYGLFGYALFVLTLGL-----GFSLLAGALALALLMLPVVIRTTEEALRLVPNSLREASYALGATKW 156

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 499501831 186 QNILQVLLPSKLPDILGGIILAIGRAAEDTAVIMLTGAVaSAGMIRSLFEQFEALPFYIYYISSQY 251
Cdd:COG0581  157 QTIRKVVLPAALPGILTGVILAIARAAGETAPLLFTAGV-SPFLPLSLFDPFATLPVHIYNLASSP 221
3a0107s02c TIGR00974
phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of ...
 27-253 2.29e-45

phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of permease proteins in the ABC (high affinity) phosphate transporter. In a number of species, this permease is fused with the PtsC protein (TIGR02138). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions]


Pssm-ID: 273373  Cd Length: 271  Bit Score: 154.32  E-value: 2.29e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499501831   27 IIGYLFHQGGAFLNSRTLFGEVGavdallfHRQVFDGLFPALMGTFALVLLAVLLAIPIGIAAGIYMAEYAR-GKTKIFF 105
Cdd:TIGR00974  22 ILWYILIKGLPALNLEFFTKSPT-------PTGAEGGIGPAIVGTLLLTLLAIVIAVPLGIGAAIYLAEYANgSRFTKII 94

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499501831  106 SLLFDILAGLPSIVIGLAGFSITILLHKMFpgriGPCLLLSAASLAFLILPYLIRTCQAALESVPQTLRQTAPALGASKI 185
Cdd:TIGR00974  95 RFAVDILAGVPSIVVGLFGYGFFVLTYLGG----GFSLLAGALALALLILPVIIRTTEEALKAVPKDLREASLALGATKW 170

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 499501831  186 QNILQVLLPSKLPDILGGIILAIGRAAEDTAVIMLTgAVASAGMIRSLFEQFEALPFYIYYISSQYSN 253
Cdd:TIGR00974 171 QTIFKVVLPAALPGILTGIILSIARAAGETAPLLFT-AGGSAFTPPNLFDPFATLPVLIYNLASEGPY 237
pstA PRK11268
phosphate ABC transporter permease PstA;
63-221 9.68e-22

phosphate ABC transporter permease PstA;


Pssm-ID: 183065 [Multi-domain]  Cd Length: 295  Bit Score: 92.44  E-value: 9.68e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499501831  63 GLFPALMGTFALVLLAVLLAIPIGIAAGIYMAEYARgKTKIFFSLLF--DILAGLPSIVIGLAGFSITILLHKMFPGRIG 140
Cdd:PRK11268  78 GLANAIAGSGLLILWATVVGTPLGIMAGIYLAEYGR-KSWLAEVIRFinDILLSAPSIVVGLFVYTIVVAQMEHFSGWAG 156

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499501831 141 PClllsaaSLAFLILPYLIRTCQAALESVPQTLRQTAPALGASKIQNILQVLLPSKLPDILGGIILAIGRAAEDTAVIML 220
Cdd:PRK11268 157 VI------ALALLQIPIVIRTTENMLKLVPDSLREAAYALGTPKWKMISAITLKASVSGIMTGVLLAIARIAGETAPLLF 230


                 .
gi 499501831 221 T 221
Cdd:PRK11268 231 T 231
TM_PBP2 cd06261
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ...
 68-248 9.48e-11

Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.


Pssm-ID: 119394 [Multi-domain]  Cd Length: 190  Bit Score: 59.60  E-value: 9.48e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499501831  68 LMGTFALVLLAVLLAIPIGIAAGIYMAEYaRGKTKIFFSLLFDILAGLPSIVIGLAGFSITILLHkmFPGRIGPCLLLSA 147
Cdd:cd06261    1 LLNTLLLALIATLLALVLGLLLGIILARK-RGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLL--GWGILPGLGLPAL 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499501831 148 ASLAFLILPYLIRTCQAALESVPQTLRQTAPALGASKIQNILQVLLPSKLPDILGGIILAIGRAAEDTAVIMLTGAVASA 227
Cdd:cd06261   78 ILALLLIAPFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLGGGEAP 157

                        170       180
                 ....*....|....*....|.
gi 499501831 228 GMIRSLFEQFEALPFYIYYIS 248
Cdd:cd06261  158 GPGTGLLLIFAILFPGDLGVA 178
BPD_transp_1 pfam00528
Binding-protein-dependent transport system inner membrane component; The alignments cover the ...
 86-223 2.67e-09

Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.


Pssm-ID: 334128 [Multi-domain]  Cd Length: 183  Bit Score: 55.38  E-value: 2.67e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499501831   86 GIAAGIYMAEYARGKTKIFFSLLFDILAGLPSIVIGLagfsitILLHKMFPGRIGPCLLLSAASLAFLILPYLIRTCQAA 165
Cdd:pfam00528   1 GIPLGIIAALRRGRRLDRLLRPLIDLLQALPSFVLAI------LLVVIAILSILGHGILPAIILALLGWAGYARLIRRAA 74

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 499501831  166 LESVPQTLRQTAPALGASKIQNILQVLLPSKLPDILGGIILAIGRAAEDTAVIMLTGA 223
Cdd:pfam00528  75 LRSLPSDLVEAARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLEFLGS 132
ABC_perm1 NF038017
ABC transporter permease; Proteins of this family are the permease subunit of an ABC ...
 85-222 2.19e-06

ABC transporter permease; Proteins of this family are the permease subunit of an ABC transporter complex, which may be involved in tungstate uptake.


Pssm-ID: 411610 [Multi-domain]  Cd Length: 184  Bit Score: 47.16  E-value: 2.19e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499501831  85 IGIAAGIYMAEYARGKTKIFFSLLFdILAGLPSIVIGLAgfsITILLhkmfpGRIGPC----LLLSAASL----AFLILP 156
Cdd:NF038017  15 IGIPLGALLALRRFPGRRLVISLLN-TLMGLPPVVVGLI---VYLLL-----SRSGPLgflgLLYTPTAMiiaqAVLALP 85

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 499501831 157 YLIRTCQAALESVPQTLRQTAPALGASKIQNILQVLLPSKLPdILGGIILAIGRA-AEDTAVIMLTG 222
Cdd:NF038017  86 IVAGLTLAAVQGLDPELRLQILSLGATRWQALWTLLKEARFA-LLAAVLAGFGRAiSEVGAVMMVGG 151
 
Name Accession Description Interval E-value
PstA COG0581
ABC-type phosphate transport system, permease component [Inorganic ion transport and ...
 27-251 2.37e-58

ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440346 [Multi-domain]  Cd Length: 259  Bit Score: 187.17  E-value: 2.37e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499501831  27 IIGYLFHQGGAFLNSRTLFGEVGAvdallfhRQVFDGLFPALMGTFALVLLAVLLAIPIGIAAGIYMAEYAR-GKTKIFF 105
Cdd:COG0581    9 ILGTVLVKGLPALSWEFLTSSPSP-------GPEGGGILPAIVGTLLLVLLATLIAVPLGVLAAIYLAEYARgGRLARLI 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499501831 106 SLLFDILAGLPSIVIGLAGFSITILLHKMfpgriGPCLLLSAASLAFLILPYLIRTCQAALESVPQTLRQTAPALGASKI 185
Cdd:COG0581   82 RFAIDVLAGVPSIVYGLFGYALFVLTLGL-----GFSLLAGALALALLMLPVVIRTTEEALRLVPNSLREASYALGATKW 156

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 499501831 186 QNILQVLLPSKLPDILGGIILAIGRAAEDTAVIMLTGAVaSAGMIRSLFEQFEALPFYIYYISSQY 251
Cdd:COG0581  157 QTIRKVVLPAALPGILTGVILAIARAAGETAPLLFTAGV-SPFLPLSLFDPFATLPVHIYNLASSP 221
3a0107s02c TIGR00974
phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of ...
 27-253 2.29e-45

phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of permease proteins in the ABC (high affinity) phosphate transporter. In a number of species, this permease is fused with the PtsC protein (TIGR02138). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions]


Pssm-ID: 273373  Cd Length: 271  Bit Score: 154.32  E-value: 2.29e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499501831   27 IIGYLFHQGGAFLNSRTLFGEVGavdallfHRQVFDGLFPALMGTFALVLLAVLLAIPIGIAAGIYMAEYAR-GKTKIFF 105
Cdd:TIGR00974  22 ILWYILIKGLPALNLEFFTKSPT-------PTGAEGGIGPAIVGTLLLTLLAIVIAVPLGIGAAIYLAEYANgSRFTKII 94

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499501831  106 SLLFDILAGLPSIVIGLAGFSITILLHKMFpgriGPCLLLSAASLAFLILPYLIRTCQAALESVPQTLRQTAPALGASKI 185
Cdd:TIGR00974  95 RFAVDILAGVPSIVVGLFGYGFFVLTYLGG----GFSLLAGALALALLILPVIIRTTEEALKAVPKDLREASLALGATKW 170

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 499501831  186 QNILQVLLPSKLPDILGGIILAIGRAAEDTAVIMLTgAVASAGMIRSLFEQFEALPFYIYYISSQYSN 253
Cdd:TIGR00974 171 QTIFKVVLPAALPGILTGIILSIARAAGETAPLLFT-AGGSAFTPPNLFDPFATLPVLIYNLASEGPY 237
PstC COG0573
ABC-type phosphate transport system, permease component [Inorganic ion transport and ...
 38-244 2.39e-30

ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440338 [Multi-domain]  Cd Length: 303  Bit Score: 115.57  E-value: 2.39e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499501831  38 FLNSRTLFGEVGAVDALL-------FHRQVFdGLFPALMGTFALVLLAVLLAIPIGIAAGIYMAEYARGKTKIFFSLLFD 110
Cdd:COG0573   43 LIESLPAFQEVGLLEFLTgtewnpvSSNGEF-GILPLIVGTLLVSLIALLIAVPLGLGIAIFLSEYAPPRLRRILKPAIE 121

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499501831 111 ILAGLPSIVIGLAG-FSITILLHKMFPGRI-GPCLLLSAASLAFLILPYLIRTCQAALESVPQTLRQTAPALGASKIQNI 188
Cdd:COG0573  122 LLAGIPSVVYGFWGlFVLVPLLRDLFPWPPsGFSLLTAGIVLAIMILPTITSLSRDALRAVPRSLREAALALGATRWETI 201

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 499501831 189 LQVLLPSKLPDILGGIILAIGRAAEDT-AVIMLTGavASAGMIRSLFEQFEALPFYI 244
Cdd:COG0573  202 RKVVLPAARSGIIAAVILGLGRALGETmAVLMVAG--NAPQIPFSLFDPGRTLTALI 256
phosphate_pstC TIGR02138
phosphate ABC transporter, permease protein PstC; The typical operon for the high affinity ...
 63-236 4.61e-27

phosphate ABC transporter, permease protein PstC; The typical operon for the high affinity inorganic phosphate ABC transporter encodes an ATP-binding protein, a phosphate-binding protein, and two permease proteins. This family consists of one of the two permease proteins, PstC, which is homologous to PstA (TIGR00974). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions]


Pssm-ID: 273992 [Multi-domain]  Cd Length: 295  Bit Score: 106.58  E-value: 4.61e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499501831   63 GLFPALMGTFALVLLAVLLAIPIGIAAGIYMAEYARGKTKIFFSLLFDILAGLPSIVIGLAGFSI------------TIL 130
Cdd:TIGR02138  60 GALPLIVGTLITSLIALLIAVPVGIGIAIFLSEIAPKRVRSVLKPVVELLAGIPSVVYGFWGLFVlvpflkphfqpfLGS 139

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499501831  131 LHKMFPGRIGPcLLLSAASLAFLILPYLIRTCQAALESVPQTLRQTAPALGASKIQNILQVLLPSKLPDILGGIILAIGR 210
Cdd:TIGR02138 140 NLGLIPLFGGP-ILTAGIVLAIMILPTIASISRDALRAVPRSYKEASYALGATKWETIRRVILPAARSGIVGAVVLGLGR 218

                         170       180
                  ....*....|....*....|....*..
gi 499501831  211 A-AEDTAVIMLTGAVASAgMIRSLFEQ 236
Cdd:TIGR02138 219 AlGETMAVTMVIGNVFPI-SPLSLFDP 244
pstA PRK11268
phosphate ABC transporter permease PstA;
63-221 9.68e-22

phosphate ABC transporter permease PstA;


Pssm-ID: 183065 [Multi-domain]  Cd Length: 295  Bit Score: 92.44  E-value: 9.68e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499501831  63 GLFPALMGTFALVLLAVLLAIPIGIAAGIYMAEYARgKTKIFFSLLF--DILAGLPSIVIGLAGFSITILLHKMFPGRIG 140
Cdd:PRK11268  78 GLANAIAGSGLLILWATVVGTPLGIMAGIYLAEYGR-KSWLAEVIRFinDILLSAPSIVVGLFVYTIVVAQMEHFSGWAG 156

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499501831 141 PClllsaaSLAFLILPYLIRTCQAALESVPQTLRQTAPALGASKIQNILQVLLPSKLPDILGGIILAIGRAAEDTAVIML 220
Cdd:PRK11268 157 VI------ALALLQIPIVIRTTENMLKLVPDSLREAAYALGTPKWKMISAITLKASVSGIMTGVLLAIARIAGETAPLLF 230


                 .
gi 499501831 221 T 221
Cdd:PRK11268 231 T 231
TM_PBP2 cd06261
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ...
 68-248 9.48e-11

Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.


Pssm-ID: 119394 [Multi-domain]  Cd Length: 190  Bit Score: 59.60  E-value: 9.48e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499501831  68 LMGTFALVLLAVLLAIPIGIAAGIYMAEYaRGKTKIFFSLLFDILAGLPSIVIGLAGFSITILLHkmFPGRIGPCLLLSA 147
Cdd:cd06261    1 LLNTLLLALIATLLALVLGLLLGIILARK-RGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLL--GWGILPGLGLPAL 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499501831 148 ASLAFLILPYLIRTCQAALESVPQTLRQTAPALGASKIQNILQVLLPSKLPDILGGIILAIGRAAEDTAVIMLTGAVASA 227
Cdd:cd06261   78 ILALLLIAPFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLGGGEAP 157

                        170       180
                 ....*....|....*....|.
gi 499501831 228 GMIRSLFEQFEALPFYIYYIS 248
Cdd:cd06261  158 GPGTGLLLIFAILFPGDLGVA 178
BPD_transp_1 pfam00528
Binding-protein-dependent transport system inner membrane component; The alignments cover the ...
 86-223 2.67e-09

Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.


Pssm-ID: 334128 [Multi-domain]  Cd Length: 183  Bit Score: 55.38  E-value: 2.67e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499501831   86 GIAAGIYMAEYARGKTKIFFSLLFDILAGLPSIVIGLagfsitILLHKMFPGRIGPCLLLSAASLAFLILPYLIRTCQAA 165
Cdd:pfam00528   1 GIPLGIIAALRRGRRLDRLLRPLIDLLQALPSFVLAI------LLVVIAILSILGHGILPAIILALLGWAGYARLIRRAA 74

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 499501831  166 LESVPQTLRQTAPALGASKIQNILQVLLPSKLPDILGGIILAIGRAAEDTAVIMLTGA 223
Cdd:pfam00528  75 LRSLPSDLVEAARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLEFLGS 132
CysU COG0555
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]; ...
 150-224 7.38e-09

ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440321 [Multi-domain]  Cd Length: 268  Bit Score: 55.53  E-value: 7.38e-09
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 499501831 150 LAFLILPYLIRTCQAALESVPQTLRQTAPALGASKIQNILQVLLPSKLPDILGGIILAIGRA-AEDTAVIMLTGAV 224
Cdd:COG0555  143 QTFVSLPFVVRTVQPVLEELDPELEEAAATLGASRWQTFRRVILPLLLPALLTGFALAFARAlGEFGAVIFIAGNL 218
cysT CHL00187
sulfate transport protein; Provisional
 122-237 8.68e-07

sulfate transport protein; Provisional


Pssm-ID: 214388 [Multi-domain]  Cd Length: 237  Bit Score: 48.86  E-value: 8.68e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499501831 122 LAGFSITILLHKmfpgrIGPCLllsaASLaFLILPYLIRTCQAALESVPQTLRQTAPALGASKIQNILQVLLPSKLPDIL 201
Cdd:CHL00187 126 LSHLGIQIVFTK-----LGVLL----AMI-FVSFPFVVRTIQPVLQEIEKELEEAAWSLGASPWQTFWKVIFPPLIPALL 195

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|..
gi 499501831 202 GGIILAIGRA-AEDTAVIMLTGAVASAGMIRSL-----FEQF 237
Cdd:CHL00187 196 TGLALTFSRAiGEYGSIVIISSNIPFKDLVASVlifqsLEQY 237
ABC_perm1 NF038017
ABC transporter permease; Proteins of this family are the permease subunit of an ABC ...
 85-222 2.19e-06

ABC transporter permease; Proteins of this family are the permease subunit of an ABC transporter complex, which may be involved in tungstate uptake.


Pssm-ID: 411610 [Multi-domain]  Cd Length: 184  Bit Score: 47.16  E-value: 2.19e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499501831  85 IGIAAGIYMAEYARGKTKIFFSLLFdILAGLPSIVIGLAgfsITILLhkmfpGRIGPC----LLLSAASL----AFLILP 156
Cdd:NF038017  15 IGIPLGALLALRRFPGRRLVISLLN-TLMGLPPVVVGLI---VYLLL-----SRSGPLgflgLLYTPTAMiiaqAVLALP 85

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 499501831 157 YLIRTCQAALESVPQTLRQTAPALGASKIQNILQVLLPSKLPdILGGIILAIGRA-AEDTAVIMLTG 222
Cdd:NF038017  86 IVAGLTLAAVQGLDPELRLQILSLGATRWQALWTLLKEARFA-LLAAVLAGFGRAiSEVGAVMMVGG 151
PotC COG1177
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport ...
 83-207 4.29e-06

ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism];


Pssm-ID: 440790 [Multi-domain]  Cd Length: 262  Bit Score: 47.03  E-value: 4.29e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499501831  83 IPIGIAAGIYMAEYaRGKTKIFFSLLFDILAGLPSIVIGLAgfsITILLHKMfpgRIGPCLLLSAASLAFLILPYLIRTC 162
Cdd:COG1177   78 TVLGTPAALALARY-RFRGRRLLLALLLLPLVVPGIVLGVA---LLLLFSAL---GLSGGLWGLILAHVVFTLPFVVLVV 150

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*
gi 499501831 163 QAALESVPQTLRQTAPALGASKIQNILQVLLPSKLPDILGGIILA 207
Cdd:COG1177  151 LARLQGFDPSLEEAARDLGASPWQTFRRVTLPLIAPGILAGALLA 195
PRK10971 PRK10971
sulfate/thiosulfate ABC transporter permease CysT;
147-225 7.40e-06

sulfate/thiosulfate ABC transporter permease CysT;


Pssm-ID: 182873  Cd Length: 277  Bit Score: 46.29  E-value: 7.40e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499501831 147 AASLAFLILPYLIRTCQAALESVPQTLRQTAPALGASKIQNILQVLLPSKLPDILGGIILAIGRA-AEDTAVIMLTGAVA 225
Cdd:PRK10971 144 AVAMAFTSIPFVVRTVQPVLEELGPEYEEAAETLGATRWQSFRKVVLPELSPALLAGVALSFTRSlGEFGAVIFIAGNIA 223
modB PRK09421
molybdate ABC transporter permease subunit;
145-211 1.44e-05

molybdate ABC transporter permease subunit;


Pssm-ID: 181841  Cd Length: 229  Bit Score: 45.30  E-value: 1.44e-05
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 499501831 145 LSAASLAFlilPYLIRTCQAALESVPQTLRQTAPALGASKIQNILQVLLPSKLPDILGGIILAIGRA 211
Cdd:PRK09421  97 LAAAVMAF---PLMVRAIRLSLEAVDRKLEQAARTLGASPWRVFFTITLPLTLPGIIAGTVLAFARS 160
FbpB COG1178
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
85-207 2.62e-05

ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440791 [Multi-domain]  Cd Length: 538  Bit Score: 45.15  E-value: 2.62e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499501831  85 IGIAAGIYMAeYARGKTKIFFSLLFDILAGLPSIVIGLA-GFSITILLHKMFPGRIGPCLLLSAASLAFLILPYLIRTCQ 163
Cdd:COG1178  353 LAVLLALLLA-YLVRRRRGRLARLLDRLAMLPYAVPGIVlGLGLLLLFNRPLPLLLYGTLAILVLAYVVRFLPFALRSLE 431

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....
gi 499501831 164 AALESVPQTLRQTAPALGASKIQNILQVLLPSKLPDILGGIILA 207
Cdd:COG1178  432 AALAQIDPSLEEAARSLGASPLRTLRRVTLPLLRPGLLAAALLV 475
pstC PRK11275
phosphate ABC transporter permease PstC;
59-222 1.35e-04

phosphate ABC transporter permease PstC;


Pssm-ID: 183070  Cd Length: 319  Bit Score: 42.76  E-value: 1.35e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499501831  59 QVFDGLFPaLMGTFALVLLAVLLAIPIGIAAGIYMAEYARGKTKIFFSLLFDILAGLPSIVIGLAG-------------- 124
Cdd:PRK11275  67 DIYGALVP-IYGTLVTSFIALLIAVPVSFGIALFLTELAPGWLKRPLGIAIELLAAIPSIVYGMWGlfvfaplfatyfqe 145

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499501831 125 -----FSITILLHKMFPG-RIGPCLLLSAASLAFLILPYLIRTCQAALESVPQTLRQTAPALGASKIQNILQVLLPSKLP 198
Cdd:PRK11275 146 pvgnvLSNIPIVGALFSGpAFGIGILAAGVILAIMIIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVIWRIVLPFTKN 225

                        170       180
                 ....*....|....*....|....*
gi 499501831 199 DILGGIILAIGRA-AEDTAVIMLTG 222
Cdd:PRK11275 226 GVIGGVMLGLGRAlGETMAVTFIIG 250
TauC COG0600
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion ...
 145-211 3.44e-04

ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440365 [Multi-domain]  Cd Length: 254  Bit Score: 41.29  E-value: 3.44e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 499501831 145 LSAASLAFLI-LPYLIRTCQAALESVPQTLRQTAPALGASKIQNILQVLLPSKLPDILGGIILAIGRA 211
Cdd:COG0600  126 ASKIFVIFLGaFFPILLNTAAGVRSVDPELLELARSLGASRWQILRKVVLPAALPYIFTGLRIALGLA 193
MetP COG2011
ABC-type methionine transport system, permease component [Amino acid transport and metabolism]; ...
 150-230 1.33e-03

ABC-type methionine transport system, permease component [Amino acid transport and metabolism];


Pssm-ID: 441614  Cd Length: 220  Bit Score: 39.27  E-value: 1.33e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499501831 150 LAFLILPYLIRTCQAALESVPQTLRQTAPALGASKIQNILQVLLPSKLPDILGGIILaigraaedtAVIMLTGAVASAGM 229
Cdd:COG2011   99 LTIAAIPFFARLVENALREVDPGVIEAAQAMGASPWQIIFKVLLPEALPSLILGLTV---------TLISLIGYSAMAGA 169


                 .
gi 499501831 230 I 230
Cdd:COG2011  170 V 170
FbpB COG1178
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
150-222 5.34e-03

ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440791 [Multi-domain]  Cd Length: 538  Bit Score: 38.22  E-value: 5.34e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 499501831 150 LAFLILPYLIRTCQAALESVPQTLRQTAPALGASKIQNILQVLLPSKLPDILGGIILAIGRAAEDTAVIMLTG 222
Cdd:COG1178  146 LVLFNYPYVYLLLRAALRSIDASLEEAARSLGASPWRAFRRVTLPLLRPAIAAGALLVFLLCLADFGTPLVLG 218
potB PRK09497
spermidine/putrescine ABC transporter membrane protein; Reviewed
 150-206 5.74e-03

spermidine/putrescine ABC transporter membrane protein; Reviewed


Pssm-ID: 181910  Cd Length: 285  Bit Score: 37.74  E-value: 5.74e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 499501831 150 LAFLILPYLIRTCQAALESVPQTLRQTAPALGASKIQNILQVLLPSKLPDILGGIIL 206
Cdd:PRK09497 157 LVYILLPFMVLPLYSSIEKLDKPLLEAARDLGANKLQTFIRIIIPLTMPGIIAGCLL 213
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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