|
Name |
Accession |
Description |
Interval |
E-value |
| FepA |
COG4771 |
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ... |
30-817 |
1.34e-53 |
|
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];
Pssm-ID: 443803 [Multi-domain] Cd Length: 612 Bit Score: 197.00 E-value: 1.34e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 30 EQQVEKLQKMKVTGSRLTRASMEGSTPVAVIGRAEIERAGDVSIADVLRKSSfnsfGSHSERSGSSAQSQaTISLRGLGS 109
Cdd:COG4771 21 AEDATELEEVVVTATRTEQSLSDAPASVSVITAEEIEKLGATDLADALRLLP----GVSVTRSGGRGGSS-GISIRGLGG 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 110 ERTLVLINGKRLPGSAAMGGGaaNINVIPSAIVERVEVMADGGSAVYGSDAVAGVVNIILKDEFDGINVTVGSGIPSQEG 189
Cdd:COG4771 96 DRVLVLIDGVPVNNPALGGGG--DLSYIPPDDIERIEVIRGPASALYGSDAIGGVINIITKKPTDELEGSVSLGYGSNGN 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 190 GDeQNVAFVMGTSGEKGNIMFSFEHdskdeiyqRDRDYLSSTNTGsdnyfdmsgvsiygrnvyhngelkalkgydtdatc 269
Cdd:COG4771 174 GT-YSGSLSLGGPGDKLSFLLSGSY--------RDRDGYLDYRNG----------------------------------- 209
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 270 dsskGFVGLTNYpglgdicgydytseaaqtaslERNTVFVNGNIFLNDDTTFNAQVLLNRNESFGRYapaagwfevdptt 349
Cdd:COG4771 210 ----GFVGNSGY---------------------ERYNLNAKLGYRLSDNHRLSLSGGYSRQDRDGGP------------- 251
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 350 sggsdfftengldPAAGPARVYYRFNNVGTRDNNVTDFQADLKAGLDGTLYTdsfgdvvwetgyQLNFSNSNEIGTgyvf 429
Cdd:COG4771 252 -------------PTLGDTEISSDNAGDRDTTTDRGNYSLRYNGDLGDNLDL------------SLYYSRTDRDST---- 302
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 430 rspaeqlansgefvngefsadaTSDLAAGTSRETQMEMHNFYGGLQFDLAEIGDVTIpvYIGAEFTTYDYFDqydpqsea 509
Cdd:COG4771 303 ----------------------NGSLGGSTGSFSDSDDTTYGLELDLTYPLGGNHTL--TLGAEYRYDDLDS-------- 350
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 510 gniiGSSGNSAGGDRETYALYAESLIAFTDELEMNIAARYDHYSDFGSE----ISPKASFRYQPLDNLMFRTGAGMGFRA 585
Cdd:COG4771 351 ----SSFLGGADASRDTYGLFAQDEWKLTDKLTLTAGLRYDYYSTFGASnytaFSPRLGLRYDLSDNLTLRASYGRGFRA 426
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 586 PTLANLYGADSFSadeakdyvycqangisdadcpetqYDVTRTSNEDLDAETSVSFNFGVSYSPIED-LDLTLDYYNISI 664
Cdd:COG4771 427 PSLAELYGSGTGT------------------------PGRYVLGNPDLKPETSDNYELGLEYRLGNGgLSLSLTGFYTDI 482
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 665 DDVITLnslqsmidqerssgvanpnierDATGRITHATAGLENLGTLDTSGLDLKVGYRYDFDsavlrYDFMGSYvlDYS 744
Cdd:COG4771 483 KDLIVL----------------------VPVGPGPGDVLQYENVGKARTYGLELELKYRLGKG-----LTLTASY--TYL 533
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 497393738 745 APEYVNGPVNNQVgrNGLPEYRFNTGVGLNFLEEHDVYLSADYIASQAQDVDENYNkTGNIPSQTIWNVAYNY 817
Cdd:COG4771 534 DSKIDDGDTGEPL--PNVPPHKANLGLDYRLPKWWLLLLLTRYYGGRYVTPPSGRL-EGYTPGYTLLDLRASY 603
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
56-866 |
2.26e-52 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 193.82 E-value: 2.26e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 56 PVAVIGRAEIERAGDVSIADVLRKSSFNSFGSHSERSGSsaqsqaTISLRGLGSERTLVLINGKRLPGSAAMGGGaaNIN 135
Cdd:cd01347 1 SVSVITAEDIEKQPATSLADLLRRIPGVSVTRGGGGGGS------TISIRGFGPDRTLVLVDGLPLASSNYGRGV--DLN 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 136 VIPSAIVERVEVMADGGSAVYGSDAVAGVVNIILKDEFDGINVTVGSGIPSQEGGDEQNVAFvmgtsgekgnimfsfehd 215
Cdd:cd01347 73 TIPPELIERVEVLKGPSSALYGSGAIGGVVNIITKRPTDEFGGSVTAGYGSDNSGSSGGGGF------------------ 134
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 216 skdeiyqrdrdylssTNTGSDNYFDMSGVSIYGrnVYHNGElkalkgydtdatcdsskgfvgltnypglgdicGYDYTSE 295
Cdd:cd01347 135 ---------------DVSGALADDGAFGARLYG--AYRDGD--------------------------------GTIDGDG 165
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 296 AAQTASLERNTVFVNGNIFLNDDTTFNAQVLLNRNESFGRYAPAAGWFEVDPTTSGGSDFFteNGLDPAAGPARVYYRFN 375
Cdd:cd01347 166 QADDSDEERYNVAGKLDWRPDDDTRLTLDAGYQDQDADGPGGTLPANGTGSSLGGGPSSNT--NGDRDWDYRDRYRKRAS 243
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 376 NVGTRDNNVTDFQADLKAGldgtlYTDSfgdvvwetgyqlNFSNSNEIGTGYVfrspaeqlansgefvngefSADATSDL 455
Cdd:cd01347 244 LGLEHDLNDTGWTLRANLS-----YSYT------------DNDGDPLILNGGN-------------------NAAGGDLG 287
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 456 AAGTSRETQMEMHNFYGGLQFDLAEIGDVTIPVYiGAEFTTYDYfdqydpqseagniigssgnsaggDRETYALYAESLI 535
Cdd:cd01347 288 RSGYSSERDTTQLGFDAGLNAPFGTGPVAHTLTL-GVEYRREEL-----------------------DEKQTALYAQDTI 343
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 536 AFTDELEMNIAARYDHY--------------SDFGSEISPKASFRYQPLDNLMFRTGAGMGFRAPTLANLYGAdsfsade 601
Cdd:cd01347 344 ELTDDLTLTLGLRYDHYdqdskdtiaggttaKKSYSHWSPSLGLVYKLTDGLSLYASYSQGFRAPSLGELYGG------- 416
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 602 aKDYVYCQANGisdadcpetqydvtrtsNEDLDAETSVSFNFGVSYSPIEDLDLTLDYYNISIDDVITlnslqsmidqer 681
Cdd:cd01347 417 -GSHGGTAAVG-----------------NPNLKPEKSKQYELGLKYDPGDGLTLSAALFRIDIKNEIV------------ 466
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 682 ssgvanpnieRDATGRITHATAGLENLGTLDTSGLDLkvGYRYDFDSavlRYDFMGSYvlDYSAPEYVNGPVNNQVGRN- 760
Cdd:cd01347 467 ----------STPTNTGLGLVTVYVNGGKARIRGVEL--EASYDLTD---GLGLTGSY--TYTDTEVKRTDGATTGNRLp 529
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 761 GLPEYRFNTGVGLNFLEEH-DVYLSADYIASQaQDVDENYNKTGNIPSQTIWNVAYNYLAPWDAKFTAGVRNLTDEDPAF 839
Cdd:cd01347 530 GIPKHTANLGLDYELPDEGlTAGGGVRYRGKQ-YADTANGNNTVKVPGYTLVDLSASYQFTKNLTLRLGVNNLFDKDYYT 608
|
810 820
....*....|....*....|....*..
gi 497393738 840 ESDGVTYDADLYSIQGRVYFVKYSQNF 866
Cdd:cd01347 609 SLSVRGSGLYGYYGPGRTYYLSVSYKF 635
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
341-863 |
6.81e-32 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 130.28 E-value: 6.81e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 341 GWFEVDPTTSGGSDFFTENGLDPAAGPARVYYRFNNVGTRDNNVTDFQADLKAGLDGTLYTDSFGDVVWETGYQLNFSNS 420
Cdd:pfam00593 1 GWQLSLDLLGDDTLLTLGYDYSRYTDGLDLGLTLDGYGNDGGYLGDRPLYYGRDYSDTDRKRLSLGYDYDLGDGLSWLST 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 421 NEIGTGYVFRSPAEQLANSGEFVNGEFsadatsdlaagTSRETQMEMHNFYGGLQFDLAEIGDVTIPVYIGAEFTTYDYF 500
Cdd:pfam00593 81 LRLGLRYSSLDGDYTSNSSGLSGAGDY-----------LSDDRLYGLYGLDGDLELSLDLSHDLLLGVELRTAGLDYRRL 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 501 DQyDPQSEAGNIIGSSGNSAGGDRETYALYAESLIAFTDELEMNIAARYDHYSDFG--------------SEISPKASFR 566
Cdd:pfam00593 150 DD-DAYDPYDPANPSSSSYSDTTTDSYGLYLQDNIKLTDRLTLTLGLRYDHYSTDGddgngggdnfsrsySAFSPRLGLV 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 567 YQPLDNLMFRTGAGMGFRAPTLANLYGADSfsadeakdyvycqangisdadcpETQYDVTRTSNEDLDAETSVSFNFGVS 646
Cdd:pfam00593 229 YKPTDNLSLYASYSRGFRAPSLGELYGSGS-----------------------GGGGGAVAGGNPDLKPETSDNYELGLK 285
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 647 YSPiEDLDLTLDYYNISIDDVITLNSLQSMIDQERSSgvanpnierdatgrithatagLENLGTLDTSGLDLKVGYRydf 726
Cdd:pfam00593 286 YDD-GRLSLSLALFYIDIKNLITSDPDGPGLGGTVYT---------------------YTNVGKARIRGVELELSGR--- 340
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 727 dsaVLRYDFMGSYvLDYSAPEYVNGPVNNQVGRNGLPEYRFNTGVGLNFLEEH-DVYLSADYIASQaQDVDENYNKTGNI 805
Cdd:pfam00593 341 ---LWGLGLSGGG-YTYTDADDDADADDTGNPLPNVPRHTANLGLTYDFPLGGwGARLGARYVGSG-ERRYGDAANTFKT 415
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*...
gi 497393738 806 PSQTIWNVAYNYLAPWDAKFTAGVRNLTDEDPAFESDGVTYDADLYSIQGRVYFVKYS 863
Cdd:pfam00593 416 PGYTLVDLSAGYRLNKNLTLRLGVNNLFDKYYKRYYSSGGGNLGGYPGPGRTFYLGLS 473
|
|
| TonB-hemlactrns |
TIGR01786 |
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model ... |
37-866 |
8.84e-17 |
|
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model represents a family of TonB-dependent outer membrane receptor/transporters acting on iron-containing proteins such as hemoglobin, transferrin and lactoferrin. Two subfamily models with a narrower scope are contained within this model, the heme/hemoglobin receptor family protein model (TIGR01785) and the transferrin/lactoferrin receptor family model (TIGR01776). Accessions which score above trusted to this model while not scoring above trusted to the more specific models are most likely to be hemoglobin transporters. Nearly all of the species containing trusted hits to this model have access to hemoglobin, transferrin or lactoferrin or related proteins in their biological niche. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273808 [Multi-domain] Cd Length: 715 Bit Score: 85.16 E-value: 8.84e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 37 QKMKVTGSRLTRASMEGSTP----VAVIGRAEIERAGDVSIADVLRKSSFNSFGShSERSGSSaqsqaTISLRGLGSERT 112
Cdd:TIGR01786 1 DTITVTATRTADPQRRDLSVtpasVSVISREQLKSQQVRNLRDLLRYEPGVSVVE-GGRGGSQ-----GINIRGLDKNRV 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 113 LVLINGKRLPGSAAM-GGGAANINVIPSAIVERVEVMADGGSAVYGSDAVAGVVNIILKDEFDGInvtvgsgipsQEGgd 191
Cdd:TIGR01786 75 AVLVDGIRQNTSYGGqGSTFYAINSIDPELIKSIEIVKGASSSLYGSGALGGVVAFRTKDAADLL----------KPG-- 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 192 eqnvafvmgtsgekgnimfsfehdskdeiyqRDRDYLSSTNTGSDNYFDMSGVSIYGRnvyhNGELKALKGYDT---DAT 268
Cdd:TIGR01786 143 -------------------------------KDLGGLSKLGYSSANNRFTQSVAAAGR----NDDVDALVQATYrrgHEL 187
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 269 CDSSKGfvGLTNYPGLGDICGYDYTSeaaqtaslerNTVFVNGNIFLNDDTTFNAqvllnrnesFGRYApaagwfevdpT 348
Cdd:TIGR01786 188 KNGNKA--NIGNESKRSKPNPSDYKS----------QSFLAKLGWQLNDAHRLGL---------SLEYT----------Q 236
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 349 TSGGSDFFTENGLDPAAGPARVYYRFNNVGTRDNNVTDFQADLKAGLDGTLYTDSFGDVVWETGYQLNFSNSNEIGTGYV 428
Cdd:TIGR01786 237 TDYDEPEMTNTSYLTKPLGAPLLSSTVVLGDSKTRDRRTGLDYELNPDNSWLDTVKLALDKQYIQLYNYLNATSASDYPG 316
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 429 FRSPAEQLaNSGEFVNGEFSADATSDLAAGTsretqmemHNFYGGLQfdlaeigdvtipvYIGAEFTTYDYFDQYdpQSE 508
Cdd:TIGR01786 317 VDKNGRYK-DKYDYYTLGFDTNNKIEFSVHS--------LSLTYGLD-------------RFKDKVSTGDSRRNL--PTA 372
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 509 AGNIIGSSGNSAGGDRETYALYAESLIAFTDELEMNIAARYDHY---------------SDFGSEISPKASFRYQPLDNL 573
Cdd:TIGR01786 373 AYNLYGYEGENRPVKGSNFGLFLQDNIKLGDWLSLSAGLRYDHYktdpkadeskdygaiSKTYSRWSPSLGLTYKPTPWL 452
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 574 MFRTGAGMGFRAPTLANLYGADSFSADEAKDYVycqangisdadcpetqydvtrtSNEDLDAETSVSFNFGVSYSpIEDL 653
Cdd:TIGR01786 453 TLYYSYSQGFRAPSFDELYGTGAHPGGGPYTFL----------------------PNPNLKPETSKNWEIGINLH-FDQL 509
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 654 DLTLDYYNISIDDVITLNSL-QSMIDQERSSGVANPNIERDATGRIthatAGLENLGTLDTSGLDLKVGY---RYDFDSA 729
Cdd:TIGR01786 510 DFKVSYFRNDYKDFIDLGIGvTAKGNMAQVGSNTITNYVNIDNARI----RGIELSGRYDLGSFFSGPDGwttTLKYGYT 585
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 730 VLRYDFMGSYvLDYSAP-EYVNGpVNNQvgrngLPEYRFNTGVGLNFLEEHDVYLSADYIASQAQDVDENYNKTgniPSQ 808
Cdd:TIGR01786 586 KGKDSDTNPW-LNAITPlKVVLG-LGYD-----HPDEKWGVGLTLTFSGAKDAVDAYATYYENGEAAKAGPLRT---PSY 655
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 497393738 809 TIWNVaYNYLAPWD-AKFTAGVRNLTDED--PAFESDGVTYDADLYSIQGRVYFVKYSQNF 866
Cdd:TIGR01786 656 TVVDL-YGYYKPNKnLTLRFGVYNLLDRKytTWESARQAGPLATGYTAPGRNYKASVEYKF 715
|
|
| PRK10064 |
PRK10064 |
catecholate siderophore receptor CirA; Provisional |
34-866 |
2.15e-15 |
|
catecholate siderophore receptor CirA; Provisional
Pssm-ID: 236646 [Multi-domain] Cd Length: 663 Bit Score: 80.31 E-value: 2.15e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 34 EKLQKMKVTGSRLTRASMEGSTPVAVIGRAEIERAGDVSIADVLRkssfnsfgshsERSG----SSAQSQATISLRGLGS 109
Cdd:PRK10064 28 DDGETMVVTASAVEQNLKDAPASISVITQEDLQRKPVQNLKDVLK-----------EVPGvqltNEGDNRKGVSIRGLDS 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 110 ERTLVLINGKRLPGSAAMGGGAA-NINVIPSAIVERVEVMADGGSAVYGSDAVAGVVNIILK---DEFDGiNVTVGSGIP 185
Cdd:PRK10064 97 SYTLILIDGKRVNSRNAVFRHNDfDLNWIPVDAIERIEVVRGPMSSLYGSDALGGVVNIITKkigQKWHG-TVTVDTTIQ 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 186 S-QEGGDEQNVAFVmgTSGEKGNimfsfehdskdeiyqrdrdylsstntgsdnyfDMSGVSIYGrnvyhngelkALKGYD 264
Cdd:PRK10064 176 EhRDRGDTYNGQFF--TSGPLID--------------------------------GVLGMKAYG----------SLAKRE 211
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 265 TDATCDSSKGFVGLTnyPGLGDICGYDYTSEAAQTAslerntvfvngniflNDDTTFNAQVLLNRNESfgryapaagwfe 344
Cdd:PRK10064 212 KDDPQNSTTTDTGET--PRIEGFTSRDGNVEFAWTP---------------NQNHDFTAGYGFDRQDR------------ 262
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 345 vdpttsgGSDFFTENGLDpaagpaRVYYRFNNVGTrdnnvtdfqadlkagldgtlytdsfgdvvWETGyqlnfsnSNEIg 424
Cdd:PRK10064 263 -------DSDSLDKNRLE------RQNYSLSHNGR-----------------------------WDYG-------NSEL- 292
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 425 tgyvfRSPAEQLANSgefvNGEFSADATSDLAAgtsretqmemhnfygglqFDlaeiGDVTIPVYIGAEFTTYDYFDQYD 504
Cdd:PRK10064 293 -----KYYGEKVENK----NPGNSSPITSESNS------------------ID----GKYTLPLTAINQFLTFGGEWRHD 341
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 505 PQSEAGNIIGssGNSAGGDRETYALYAESLIAFTDELEMNIAARYDHYSDFGSEISPKASFRYQPLDNLMFRTGAGMGFR 584
Cdd:PRK10064 342 KLSDAVNLTG--GTSSKTSASQYALFVEDEWRIFEPLALTTGVRMDDHETYGDHWSPRAYLVYNATDTVTVKGGWATAFK 419
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 585 APTLANLygadsfSADEAKdyvycqangisdADCPETQYDVtrtSNEDLDAETSVSFNFGVSYSPIEDLdltLDYYNISI 664
Cdd:PRK10064 420 APSLLQL------SPDWTS------------NSCRGACKIV---GSPDLKPETSESWELGLYYMGEEGW---LEGVESSV 475
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 665 ddVITLNSLQSMIDQERSSGVAN----PN---IERDATGRITHATAgLENLGTLDTSGLDLKVgyRYDFDSAvlrYDFMG 737
Cdd:PRK10064 476 --TVFRNDVDDRISISRTSDVNAapgyQNfvgFETNGRGRRVPVFR-YYNVNKARIQGVETEL--KIPFNDE---WKLSL 547
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 738 SYVldysapeYVNGPVNNQVGRNGLPEYRFNTGVG-----LNFLEEHDVYLSADYIASQAQDvdenyNKTGNIPSQ-TIW 811
Cdd:PRK10064 548 NYT-------YNDGRDVSNGENKPLSDLPFHTANGtldwkPLALEDWSFYVSGNYTGQKRAD-----SATAKTPGGyTIW 615
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....*
gi 497393738 812 NVAYNYLAPWDAKFTAGVRNLTDEDPAFESDGVTYDadlysiqGRVYFVKYSQNF 866
Cdd:PRK10064 616 NTGAAWQVTKDVKLRAGVLNLGDKDLSRDDYSYNED-------GRRYFMAVDYRF 663
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| FepA |
COG4771 |
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ... |
30-817 |
1.34e-53 |
|
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];
Pssm-ID: 443803 [Multi-domain] Cd Length: 612 Bit Score: 197.00 E-value: 1.34e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 30 EQQVEKLQKMKVTGSRLTRASMEGSTPVAVIGRAEIERAGDVSIADVLRKSSfnsfGSHSERSGSSAQSQaTISLRGLGS 109
Cdd:COG4771 21 AEDATELEEVVVTATRTEQSLSDAPASVSVITAEEIEKLGATDLADALRLLP----GVSVTRSGGRGGSS-GISIRGLGG 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 110 ERTLVLINGKRLPGSAAMGGGaaNINVIPSAIVERVEVMADGGSAVYGSDAVAGVVNIILKDEFDGINVTVGSGIPSQEG 189
Cdd:COG4771 96 DRVLVLIDGVPVNNPALGGGG--DLSYIPPDDIERIEVIRGPASALYGSDAIGGVINIITKKPTDELEGSVSLGYGSNGN 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 190 GDeQNVAFVMGTSGEKGNIMFSFEHdskdeiyqRDRDYLSSTNTGsdnyfdmsgvsiygrnvyhngelkalkgydtdatc 269
Cdd:COG4771 174 GT-YSGSLSLGGPGDKLSFLLSGSY--------RDRDGYLDYRNG----------------------------------- 209
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 270 dsskGFVGLTNYpglgdicgydytseaaqtaslERNTVFVNGNIFLNDDTTFNAQVLLNRNESFGRYapaagwfevdptt 349
Cdd:COG4771 210 ----GFVGNSGY---------------------ERYNLNAKLGYRLSDNHRLSLSGGYSRQDRDGGP------------- 251
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 350 sggsdfftengldPAAGPARVYYRFNNVGTRDNNVTDFQADLKAGLDGTLYTdsfgdvvwetgyQLNFSNSNEIGTgyvf 429
Cdd:COG4771 252 -------------PTLGDTEISSDNAGDRDTTTDRGNYSLRYNGDLGDNLDL------------SLYYSRTDRDST---- 302
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 430 rspaeqlansgefvngefsadaTSDLAAGTSRETQMEMHNFYGGLQFDLAEIGDVTIpvYIGAEFTTYDYFDqydpqsea 509
Cdd:COG4771 303 ----------------------NGSLGGSTGSFSDSDDTTYGLELDLTYPLGGNHTL--TLGAEYRYDDLDS-------- 350
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 510 gniiGSSGNSAGGDRETYALYAESLIAFTDELEMNIAARYDHYSDFGSE----ISPKASFRYQPLDNLMFRTGAGMGFRA 585
Cdd:COG4771 351 ----SSFLGGADASRDTYGLFAQDEWKLTDKLTLTAGLRYDYYSTFGASnytaFSPRLGLRYDLSDNLTLRASYGRGFRA 426
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 586 PTLANLYGADSFSadeakdyvycqangisdadcpetqYDVTRTSNEDLDAETSVSFNFGVSYSPIED-LDLTLDYYNISI 664
Cdd:COG4771 427 PSLAELYGSGTGT------------------------PGRYVLGNPDLKPETSDNYELGLEYRLGNGgLSLSLTGFYTDI 482
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 665 DDVITLnslqsmidqerssgvanpnierDATGRITHATAGLENLGTLDTSGLDLKVGYRYDFDsavlrYDFMGSYvlDYS 744
Cdd:COG4771 483 KDLIVL----------------------VPVGPGPGDVLQYENVGKARTYGLELELKYRLGKG-----LTLTASY--TYL 533
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 497393738 745 APEYVNGPVNNQVgrNGLPEYRFNTGVGLNFLEEHDVYLSADYIASQAQDVDENYNkTGNIPSQTIWNVAYNY 817
Cdd:COG4771 534 DSKIDDGDTGEPL--PNVPPHKANLGLDYRLPKWWLLLLLTRYYGGRYVTPPSGRL-EGYTPGYTLLDLRASY 603
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
56-866 |
2.26e-52 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 193.82 E-value: 2.26e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 56 PVAVIGRAEIERAGDVSIADVLRKSSFNSFGSHSERSGSsaqsqaTISLRGLGSERTLVLINGKRLPGSAAMGGGaaNIN 135
Cdd:cd01347 1 SVSVITAEDIEKQPATSLADLLRRIPGVSVTRGGGGGGS------TISIRGFGPDRTLVLVDGLPLASSNYGRGV--DLN 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 136 VIPSAIVERVEVMADGGSAVYGSDAVAGVVNIILKDEFDGINVTVGSGIPSQEGGDEQNVAFvmgtsgekgnimfsfehd 215
Cdd:cd01347 73 TIPPELIERVEVLKGPSSALYGSGAIGGVVNIITKRPTDEFGGSVTAGYGSDNSGSSGGGGF------------------ 134
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 216 skdeiyqrdrdylssTNTGSDNYFDMSGVSIYGrnVYHNGElkalkgydtdatcdsskgfvgltnypglgdicGYDYTSE 295
Cdd:cd01347 135 ---------------DVSGALADDGAFGARLYG--AYRDGD--------------------------------GTIDGDG 165
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 296 AAQTASLERNTVFVNGNIFLNDDTTFNAQVLLNRNESFGRYAPAAGWFEVDPTTSGGSDFFteNGLDPAAGPARVYYRFN 375
Cdd:cd01347 166 QADDSDEERYNVAGKLDWRPDDDTRLTLDAGYQDQDADGPGGTLPANGTGSSLGGGPSSNT--NGDRDWDYRDRYRKRAS 243
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 376 NVGTRDNNVTDFQADLKAGldgtlYTDSfgdvvwetgyqlNFSNSNEIGTGYVfrspaeqlansgefvngefSADATSDL 455
Cdd:cd01347 244 LGLEHDLNDTGWTLRANLS-----YSYT------------DNDGDPLILNGGN-------------------NAAGGDLG 287
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 456 AAGTSRETQMEMHNFYGGLQFDLAEIGDVTIPVYiGAEFTTYDYfdqydpqseagniigssgnsaggDRETYALYAESLI 535
Cdd:cd01347 288 RSGYSSERDTTQLGFDAGLNAPFGTGPVAHTLTL-GVEYRREEL-----------------------DEKQTALYAQDTI 343
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 536 AFTDELEMNIAARYDHY--------------SDFGSEISPKASFRYQPLDNLMFRTGAGMGFRAPTLANLYGAdsfsade 601
Cdd:cd01347 344 ELTDDLTLTLGLRYDHYdqdskdtiaggttaKKSYSHWSPSLGLVYKLTDGLSLYASYSQGFRAPSLGELYGG------- 416
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 602 aKDYVYCQANGisdadcpetqydvtrtsNEDLDAETSVSFNFGVSYSPIEDLDLTLDYYNISIDDVITlnslqsmidqer 681
Cdd:cd01347 417 -GSHGGTAAVG-----------------NPNLKPEKSKQYELGLKYDPGDGLTLSAALFRIDIKNEIV------------ 466
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 682 ssgvanpnieRDATGRITHATAGLENLGTLDTSGLDLkvGYRYDFDSavlRYDFMGSYvlDYSAPEYVNGPVNNQVGRN- 760
Cdd:cd01347 467 ----------STPTNTGLGLVTVYVNGGKARIRGVEL--EASYDLTD---GLGLTGSY--TYTDTEVKRTDGATTGNRLp 529
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 761 GLPEYRFNTGVGLNFLEEH-DVYLSADYIASQaQDVDENYNKTGNIPSQTIWNVAYNYLAPWDAKFTAGVRNLTDEDPAF 839
Cdd:cd01347 530 GIPKHTANLGLDYELPDEGlTAGGGVRYRGKQ-YADTANGNNTVKVPGYTLVDLSASYQFTKNLTLRLGVNNLFDKDYYT 608
|
810 820
....*....|....*....|....*..
gi 497393738 840 ESDGVTYDADLYSIQGRVYFVKYSQNF 866
Cdd:cd01347 609 SLSVRGSGLYGYYGPGRTYYLSVSYKF 635
|
|
| CirA |
COG1629 |
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism]; |
36-836 |
1.24e-38 |
|
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
Pssm-ID: 441236 [Multi-domain] Cd Length: 644 Bit Score: 153.44 E-value: 1.24e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 36 LQKMKVTGSRLTRASMEGSTPVAVIGRAEIERAGDVSIADVLRK-SSFNSfgshsersGSSAQSQATISLRGLGSE--RT 112
Cdd:COG1629 1 LEEVVVTATRTDESLQDVPGSVSVISREQLEDQPATDLGDLLRRvPGVSV--------TSAGGGAGQISIRGFGGGgnRV 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 113 LVLINGKRLPGSAAMGGgaaNINVIPSAIVERVEVMADGGSAVYGSDAVAGVVNIILKDEFDGINVTVGSGIPSQeggDE 192
Cdd:COG1629 73 LVLVDGVPLNDPSGGDG---GLSYIDPEDIERVEVLRGPSSALYGSGALGGVINIVTKKPKDGKGGEVSASYGSY---GT 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 193 QNVAFVMGTSGEKGNIMFSFEHdskdeiyqrdrdylsstnTGSDNYFDMSGVsiygrnvyhngelkalkgydtdatcdss 272
Cdd:COG1629 147 YRASLSLSGGNGKLAYRLSASY------------------RDSDGYRDNSDS---------------------------- 180
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 273 kgfvgltnypglgdicgydytseaaqtaslERNTVFVNGNIFLNDDTTFNAQVLLNRNESFGRYAPAAGWFEVDPTTSGG 352
Cdd:COG1629 181 ------------------------------DRYNLRAKLGYQLGDDTRLTLSASYSDSDQDSPGYLTLAALRPRGAMDDG 230
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 353 SDFFTENGLDPAAGPARVYYRFnnvgTRDNNVTDFQADLKAGLDGTLYTDSFGDVVWETGYQLNFSNSNEIGTgyvfrsp 432
Cdd:COG1629 231 TNPYSNDTDDNTRDRYSLSLEY----EHLGDGLKLSASAYYRYDDTDLDSDFTPTPADGGTLEQTDFDNRTYG------- 299
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 433 aeqlansgefvngeFSADATSDLAAGTSretqmemHNFYGGLQFDLAEIGDVTIPVYIGAEFTTYDYFDQYDPqseagni 512
Cdd:COG1629 300 --------------LELRLTYDLGFGGK-------HTLLVGLDYQRQDLDGSGYPLDLGSGSLPTLTSGADDD------- 351
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 513 igssgnsagGDRETYALYAESLIAFTDELEMNIAARYDHYSDFG----------------SEISPKASFRYQPLDNLMFR 576
Cdd:COG1629 352 ---------GTTTSLALYAQDTYKLTDKLTLTAGLRYDYVSYDVddtvtgtdsasgsrsySAFSPSLGLTYQLSPNLSLY 422
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 577 TGAGMGFRAPTLANLYGadsfsadeakdyvycqangisdadcpeTQYDVTRTSNEDLDAETSVSFNFGVSYSPIED-LDL 655
Cdd:COG1629 423 ASYSRGFRAPTFGELYA---------------------------NGTDPYSVGNPDLKPETSTNYELGLRYRLLDGrLSL 475
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 656 TLDYYNISIDDVITLNSLQsmidqerssgvanpnierDATGRITHatagLENLGTLDTSGLDLKVGYRYdfdSAVLRYDF 735
Cdd:COG1629 476 SLALFYSDVDNEILSVPLP------------------NDSGFSTY----YTNAGKARSYGVELELSYQL---TPGLSLNA 530
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 736 MGSYVLDYSAPEYVNGPVNNQVGRNGLPEYRFNTGVGLNFLEEHDVYLSADYIASQAQDvdeNYNKTGNIPSQTIWNVAY 815
Cdd:COG1629 531 SYSYTDAKFDDDTDGSADLDGNRLPGVPPLTANLGLTYEFPGGWSLGLGVRYVGDRYLD---DANTQGAPGGYTLVDLGA 607
|
810 820
....*....|....*....|.
gi 497393738 816 NYLAPWDAKFTAGVRNLTDED 836
Cdd:COG1629 608 GYRFGDNLTLSLGVDNLFDKK 628
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
341-863 |
6.81e-32 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 130.28 E-value: 6.81e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 341 GWFEVDPTTSGGSDFFTENGLDPAAGPARVYYRFNNVGTRDNNVTDFQADLKAGLDGTLYTDSFGDVVWETGYQLNFSNS 420
Cdd:pfam00593 1 GWQLSLDLLGDDTLLTLGYDYSRYTDGLDLGLTLDGYGNDGGYLGDRPLYYGRDYSDTDRKRLSLGYDYDLGDGLSWLST 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 421 NEIGTGYVFRSPAEQLANSGEFVNGEFsadatsdlaagTSRETQMEMHNFYGGLQFDLAEIGDVTIPVYIGAEFTTYDYF 500
Cdd:pfam00593 81 LRLGLRYSSLDGDYTSNSSGLSGAGDY-----------LSDDRLYGLYGLDGDLELSLDLSHDLLLGVELRTAGLDYRRL 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 501 DQyDPQSEAGNIIGSSGNSAGGDRETYALYAESLIAFTDELEMNIAARYDHYSDFG--------------SEISPKASFR 566
Cdd:pfam00593 150 DD-DAYDPYDPANPSSSSYSDTTTDSYGLYLQDNIKLTDRLTLTLGLRYDHYSTDGddgngggdnfsrsySAFSPRLGLV 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 567 YQPLDNLMFRTGAGMGFRAPTLANLYGADSfsadeakdyvycqangisdadcpETQYDVTRTSNEDLDAETSVSFNFGVS 646
Cdd:pfam00593 229 YKPTDNLSLYASYSRGFRAPSLGELYGSGS-----------------------GGGGGAVAGGNPDLKPETSDNYELGLK 285
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 647 YSPiEDLDLTLDYYNISIDDVITLNSLQSMIDQERSSgvanpnierdatgrithatagLENLGTLDTSGLDLKVGYRydf 726
Cdd:pfam00593 286 YDD-GRLSLSLALFYIDIKNLITSDPDGPGLGGTVYT---------------------YTNVGKARIRGVELELSGR--- 340
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 727 dsaVLRYDFMGSYvLDYSAPEYVNGPVNNQVGRNGLPEYRFNTGVGLNFLEEH-DVYLSADYIASQaQDVDENYNKTGNI 805
Cdd:pfam00593 341 ---LWGLGLSGGG-YTYTDADDDADADDTGNPLPNVPRHTANLGLTYDFPLGGwGARLGARYVGSG-ERRYGDAANTFKT 415
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*...
gi 497393738 806 PSQTIWNVAYNYLAPWDAKFTAGVRNLTDEDPAFESDGVTYDADLYSIQGRVYFVKYS 863
Cdd:pfam00593 416 PGYTLVDLSAGYRLNKNLTLRLGVNNLFDKYYKRYYSSGGGNLGGYPGPGRTFYLGLS 473
|
|
| BtuB |
COG4206 |
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism]; |
41-239 |
5.81e-28 |
|
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];
Pssm-ID: 443355 [Multi-domain] Cd Length: 276 Bit Score: 114.20 E-value: 5.81e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 41 VTGSRLTRASMEGSTPVAVIGRAEIERAGDVSIADVLRKSSfnsfGSHSERSGSSAqSQATISLRGLGSERTLVLINGKR 120
Cdd:COG4206 3 VTATRLEQSKSDLTGSVTVIDAEELERSGATSLADALRRVP----GVQVSSSGGPG-SAASISIRGLGSNQTLVLIDGVP 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 121 LpgsAAMGGGAANINVIPSAIVERVEVMADGGSAVYGSDAVAGVVNIILKDEFDGINVTVGSGIPSQeggDEQNVAFVMG 200
Cdd:COG4206 78 L---NDPSLGGVDLSLIPPDDIERIEVLKGAASALYGSDAIGGVINITTKKGKKGFKGSVSASYGSF---GTRRLSASLS 151
|
170 180 190
....*....|....*....|....*....|....*....
gi 497393738 201 TSGEKGNIMFSFEHDSKDEIYQRDRDYLSSTNTGSDNYF 239
Cdd:COG4206 152 GGAGKFSYSLSASYRRSDGYRYNDPDLRNNDGYENTSLN 190
|
|
| FecA |
COG4772 |
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism]; |
30-860 |
9.47e-20 |
|
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
Pssm-ID: 443804 [Multi-domain] Cd Length: 681 Bit Score: 94.61 E-value: 9.47e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 30 EQQVEKLQKMKVTGSRLTRASME---GStpVAVIGRAEIERAGDVSIADVLRKSSfnsfGSH-SERSGSSAQSQatISLR 105
Cdd:COG4772 17 AEAATTLETVVVTGSRAAEARLKdvpGS--VSVVDREELENQAATSLREVLRRVP----GVNvQEEDGFGLRPN--IGIR 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 106 GLGSERT---LVLINGkrLPGSAAMGGGAANINVIPSAIVERVEVMADGGSAVYGSDAVAGVVNIILKDefdginvtvgs 182
Cdd:COG4772 89 GLGPRRSrgiTLLEDG--IPIAPAPYGDPAAYYFPDLERMERIEVLRGAAALRYGPQTVGGAINFVTRT----------- 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 183 gIPSQEGGDeqnvafvmgtsgekgnimfsfehdskdeiyqrdrdylSSTNTGSDNYFDmSGVSIYGRnvyhNGELkalkG 262
Cdd:COG4772 156 -IPTAFGGE-------------------------------------LRVTGGSFGYRR-THASVGGT----VGNF----G 188
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 263 YDTDATCDSSKGFVGLTNYpglgdicgydytseaaqtaslERNTVFVNGNIFLNDD--TTFNAQVLLNRNESFGRYAPAA 340
Cdd:COG4772 189 YLVEYSRKRGDGFRDNSGF---------------------DINDFNAKLGYRLSDRqeLTLKFQYYDEDANTPGGLTDAQ 247
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 341 gwFEVDPTTSggsdfftengldpaagpARVYYRFNNVGTRDNNVTDFQADLKAGLDGTLY-TDSFGDVVWEtgyqLNFSN 419
Cdd:COG4772 248 --FDADPRQS-----------------YRPADQFDTRRTQLSLRYEHQLSDNTTLTTTAYyNDFSRNWYIR----QNTAD 304
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 420 SNEIGTGYVfrspaeqlANSGEFVNGEFSADATSDLAAGTSRetqmemHNFYGGLQFDlaeigdvtipvyigaefttYDY 499
Cdd:COG4772 305 PNTPGLGLR--------GNPRGYRSYGIEPRLTHRFELGGVP------HTLEVGLRYH-------------------REE 351
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 500 FDqyDPQSEAGNIIGSSGNSAGGDR----ETYALYAESLIAFTDELEMNIAARYDH----YSDFG--------------S 557
Cdd:COG4772 352 ED--RKQYVNTYGQGRSGAGLRRDRrfsaDALAAYAQNRFELTGRLTLTPGLRYEHirrdRTDRYstrtggddsgsnsyS 429
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 558 EISPKASFRYQPLDNLMFRTGAGMGFRAPTLANLYGADSfsadeakdyvycqangisdadcpetqydvtrtSNEDLDAET 637
Cdd:COG4772 430 EFLPGLGLLYQLTDNLQLYANVSRGFEPPTFGDLAYGNG--------------------------------GNPDLKPEK 477
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 638 SVSFNFGVSYSPIEDLDLTLDYYNISIDDVItlnslqsmidQERSSGVANPNIERDAtGRITHatAGLEnlgtldtsgld 717
Cdd:COG4772 478 SWNYELGTRGRIGNGLSAEVALFYIDYDNEL----------GSCSAAGGDRSTFTNA-GETRH--QGLE----------- 533
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 718 lkVGYRYDFD-SAVLRYDFMGSYvlDYSAPEYVNGPVNNQVGRN--GLPEYRFNTGVGLnfleEHD---VYLSADYIASQ 791
Cdd:COG4772 534 --LALDYDLLkGGGLGLPLFAAY--TYTDAEFTSDFGPVFAGNRlpYVPRHQLTAGLGY----EHGgwtANLNGRYVSEQ 605
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 497393738 792 AQDvDENYNKTG---NIPSQTIWNVAYNYLAPWDAKFTAGVRNLTDEDPAFeSDGVTYDADLYSIQGRVYFV 860
Cdd:COG4772 606 FTD-AANTVADGsfgKIPSYTVLDLSASYDFGKNLSLFAGVNNLFDKRYIA-SRAPNYAAGIRPGPPRTVYA 675
|
|
| Plug |
pfam07715 |
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently ... |
51-164 |
1.64e-19 |
|
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors. It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens the channel.
Pssm-ID: 462243 [Multi-domain] Cd Length: 107 Bit Score: 84.63 E-value: 1.64e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 51 MEGSTPVAVIGRAEIERAGDVSIADVLRK-SSFNSfgshserSGSSAQSQATISLRGLGSERTLVLINGKRLPGSAAMGG 129
Cdd:pfam07715 3 RDTPGSVSVVTAEDIEDQGATNLADALRGvPGVSV-------SSGGGGGGSSISIRGFGSNRVLVLVDGVPLNSGGGGSV 75
|
90 100 110
....*....|....*....|....*....|....*
gi 497393738 130 gaaNINVIPSAIVERVEVMADGGSAVYGSDAVAGV 164
Cdd:pfam07715 76 ---DLNSIDPEDIERVEVLKGPASALYGSGAIGGV 107
|
|
| TonB-hemlactrns |
TIGR01786 |
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model ... |
37-866 |
8.84e-17 |
|
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model represents a family of TonB-dependent outer membrane receptor/transporters acting on iron-containing proteins such as hemoglobin, transferrin and lactoferrin. Two subfamily models with a narrower scope are contained within this model, the heme/hemoglobin receptor family protein model (TIGR01785) and the transferrin/lactoferrin receptor family model (TIGR01776). Accessions which score above trusted to this model while not scoring above trusted to the more specific models are most likely to be hemoglobin transporters. Nearly all of the species containing trusted hits to this model have access to hemoglobin, transferrin or lactoferrin or related proteins in their biological niche. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273808 [Multi-domain] Cd Length: 715 Bit Score: 85.16 E-value: 8.84e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 37 QKMKVTGSRLTRASMEGSTP----VAVIGRAEIERAGDVSIADVLRKSSFNSFGShSERSGSSaqsqaTISLRGLGSERT 112
Cdd:TIGR01786 1 DTITVTATRTADPQRRDLSVtpasVSVISREQLKSQQVRNLRDLLRYEPGVSVVE-GGRGGSQ-----GINIRGLDKNRV 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 113 LVLINGKRLPGSAAM-GGGAANINVIPSAIVERVEVMADGGSAVYGSDAVAGVVNIILKDEFDGInvtvgsgipsQEGgd 191
Cdd:TIGR01786 75 AVLVDGIRQNTSYGGqGSTFYAINSIDPELIKSIEIVKGASSSLYGSGALGGVVAFRTKDAADLL----------KPG-- 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 192 eqnvafvmgtsgekgnimfsfehdskdeiyqRDRDYLSSTNTGSDNYFDMSGVSIYGRnvyhNGELKALKGYDT---DAT 268
Cdd:TIGR01786 143 -------------------------------KDLGGLSKLGYSSANNRFTQSVAAAGR----NDDVDALVQATYrrgHEL 187
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 269 CDSSKGfvGLTNYPGLGDICGYDYTSeaaqtaslerNTVFVNGNIFLNDDTTFNAqvllnrnesFGRYApaagwfevdpT 348
Cdd:TIGR01786 188 KNGNKA--NIGNESKRSKPNPSDYKS----------QSFLAKLGWQLNDAHRLGL---------SLEYT----------Q 236
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 349 TSGGSDFFTENGLDPAAGPARVYYRFNNVGTRDNNVTDFQADLKAGLDGTLYTDSFGDVVWETGYQLNFSNSNEIGTGYV 428
Cdd:TIGR01786 237 TDYDEPEMTNTSYLTKPLGAPLLSSTVVLGDSKTRDRRTGLDYELNPDNSWLDTVKLALDKQYIQLYNYLNATSASDYPG 316
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 429 FRSPAEQLaNSGEFVNGEFSADATSDLAAGTsretqmemHNFYGGLQfdlaeigdvtipvYIGAEFTTYDYFDQYdpQSE 508
Cdd:TIGR01786 317 VDKNGRYK-DKYDYYTLGFDTNNKIEFSVHS--------LSLTYGLD-------------RFKDKVSTGDSRRNL--PTA 372
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 509 AGNIIGSSGNSAGGDRETYALYAESLIAFTDELEMNIAARYDHY---------------SDFGSEISPKASFRYQPLDNL 573
Cdd:TIGR01786 373 AYNLYGYEGENRPVKGSNFGLFLQDNIKLGDWLSLSAGLRYDHYktdpkadeskdygaiSKTYSRWSPSLGLTYKPTPWL 452
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 574 MFRTGAGMGFRAPTLANLYGADSFSADEAKDYVycqangisdadcpetqydvtrtSNEDLDAETSVSFNFGVSYSpIEDL 653
Cdd:TIGR01786 453 TLYYSYSQGFRAPSFDELYGTGAHPGGGPYTFL----------------------PNPNLKPETSKNWEIGINLH-FDQL 509
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 654 DLTLDYYNISIDDVITLNSL-QSMIDQERSSGVANPNIERDATGRIthatAGLENLGTLDTSGLDLKVGY---RYDFDSA 729
Cdd:TIGR01786 510 DFKVSYFRNDYKDFIDLGIGvTAKGNMAQVGSNTITNYVNIDNARI----RGIELSGRYDLGSFFSGPDGwttTLKYGYT 585
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 730 VLRYDFMGSYvLDYSAP-EYVNGpVNNQvgrngLPEYRFNTGVGLNFLEEHDVYLSADYIASQAQDVDENYNKTgniPSQ 808
Cdd:TIGR01786 586 KGKDSDTNPW-LNAITPlKVVLG-LGYD-----HPDEKWGVGLTLTFSGAKDAVDAYATYYENGEAAKAGPLRT---PSY 655
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 497393738 809 TIWNVaYNYLAPWD-AKFTAGVRNLTDED--PAFESDGVTYDADLYSIQGRVYFVKYSQNF 866
Cdd:TIGR01786 656 TVVDL-YGYYKPNKnLTLRFGVYNLLDRKytTWESARQAGPLATGYTAPGRNYKASVEYKF 715
|
|
| PRK10064 |
PRK10064 |
catecholate siderophore receptor CirA; Provisional |
34-866 |
2.15e-15 |
|
catecholate siderophore receptor CirA; Provisional
Pssm-ID: 236646 [Multi-domain] Cd Length: 663 Bit Score: 80.31 E-value: 2.15e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 34 EKLQKMKVTGSRLTRASMEGSTPVAVIGRAEIERAGDVSIADVLRkssfnsfgshsERSG----SSAQSQATISLRGLGS 109
Cdd:PRK10064 28 DDGETMVVTASAVEQNLKDAPASISVITQEDLQRKPVQNLKDVLK-----------EVPGvqltNEGDNRKGVSIRGLDS 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 110 ERTLVLINGKRLPGSAAMGGGAA-NINVIPSAIVERVEVMADGGSAVYGSDAVAGVVNIILK---DEFDGiNVTVGSGIP 185
Cdd:PRK10064 97 SYTLILIDGKRVNSRNAVFRHNDfDLNWIPVDAIERIEVVRGPMSSLYGSDALGGVVNIITKkigQKWHG-TVTVDTTIQ 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 186 S-QEGGDEQNVAFVmgTSGEKGNimfsfehdskdeiyqrdrdylsstntgsdnyfDMSGVSIYGrnvyhngelkALKGYD 264
Cdd:PRK10064 176 EhRDRGDTYNGQFF--TSGPLID--------------------------------GVLGMKAYG----------SLAKRE 211
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 265 TDATCDSSKGFVGLTnyPGLGDICGYDYTSEAAQTAslerntvfvngniflNDDTTFNAQVLLNRNESfgryapaagwfe 344
Cdd:PRK10064 212 KDDPQNSTTTDTGET--PRIEGFTSRDGNVEFAWTP---------------NQNHDFTAGYGFDRQDR------------ 262
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 345 vdpttsgGSDFFTENGLDpaagpaRVYYRFNNVGTrdnnvtdfqadlkagldgtlytdsfgdvvWETGyqlnfsnSNEIg 424
Cdd:PRK10064 263 -------DSDSLDKNRLE------RQNYSLSHNGR-----------------------------WDYG-------NSEL- 292
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 425 tgyvfRSPAEQLANSgefvNGEFSADATSDLAAgtsretqmemhnfygglqFDlaeiGDVTIPVYIGAEFTTYDYFDQYD 504
Cdd:PRK10064 293 -----KYYGEKVENK----NPGNSSPITSESNS------------------ID----GKYTLPLTAINQFLTFGGEWRHD 341
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 505 PQSEAGNIIGssGNSAGGDRETYALYAESLIAFTDELEMNIAARYDHYSDFGSEISPKASFRYQPLDNLMFRTGAGMGFR 584
Cdd:PRK10064 342 KLSDAVNLTG--GTSSKTSASQYALFVEDEWRIFEPLALTTGVRMDDHETYGDHWSPRAYLVYNATDTVTVKGGWATAFK 419
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 585 APTLANLygadsfSADEAKdyvycqangisdADCPETQYDVtrtSNEDLDAETSVSFNFGVSYSPIEDLdltLDYYNISI 664
Cdd:PRK10064 420 APSLLQL------SPDWTS------------NSCRGACKIV---GSPDLKPETSESWELGLYYMGEEGW---LEGVESSV 475
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 665 ddVITLNSLQSMIDQERSSGVAN----PN---IERDATGRITHATAgLENLGTLDTSGLDLKVgyRYDFDSAvlrYDFMG 737
Cdd:PRK10064 476 --TVFRNDVDDRISISRTSDVNAapgyQNfvgFETNGRGRRVPVFR-YYNVNKARIQGVETEL--KIPFNDE---WKLSL 547
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 738 SYVldysapeYVNGPVNNQVGRNGLPEYRFNTGVG-----LNFLEEHDVYLSADYIASQAQDvdenyNKTGNIPSQ-TIW 811
Cdd:PRK10064 548 NYT-------YNDGRDVSNGENKPLSDLPFHTANGtldwkPLALEDWSFYVSGNYTGQKRAD-----SATAKTPGGyTIW 615
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....*
gi 497393738 812 NVAYNYLAPWDAKFTAGVRNLTDEDPAFESDGVTYDadlysiqGRVYFVKYSQNF 866
Cdd:PRK10064 616 NTGAAWQVTKDVKLRAGVLNLGDKDLSRDDYSYNED-------GRRYFMAVDYRF 663
|
|
| btuB |
PRK10641 |
TonB-dependent vitamin B12 receptor BtuB; |
56-183 |
3.46e-15 |
|
TonB-dependent vitamin B12 receptor BtuB;
Pssm-ID: 236730 [Multi-domain] Cd Length: 614 Bit Score: 79.65 E-value: 3.46e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 56 PVAVIGRAEIERAGDVSIADVLRKSSfnsfGSHSERSGSSAQSqATISLRGLGSERTLVLINGKRLpgSAAMGGGAANIN 135
Cdd:PRK10641 45 PTTVVTRDDIDRWQSKSVNDVLRRLP----GVDIAQNGGLGQL-SSLFIRGTNSSHVLVLIDGVRL--NQAGISGSADLS 117
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 497393738 136 VIPSAIVERVEVMADGGSAVYGSDAVAGVVNIILKDEFDGINVTVGSG 183
Cdd:PRK10641 118 QIPISLVQRIEYIRGPRSAVYGSDAIGGVVNIITTRDKPGTTLSAGWG 165
|
|
| PRK13524 |
PRK13524 |
FepA family TonB-dependent siderophore receptor; |
1-647 |
6.54e-15 |
|
FepA family TonB-dependent siderophore receptor;
Pssm-ID: 237410 [Multi-domain] Cd Length: 744 Bit Score: 78.92 E-value: 6.54e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 1 MYKNTTALSVAISLALGTAAVAPLAAQAEEQQVE--KLQKMKVTGSRLTRASMEgstpVAVIGRAEIER---AGDVSiaD 75
Cdd:PRK13524 1 MNKKIHSLALLVNLGIYGVAQAAEAEDAKTDDTPasHEDTIVVTAAEQNLQAPG----VSTITAEDIRKrppANDVS--E 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 76 VLRK-SSFNSFG-SHSERSGSSAQsqatISLRGLGSERTLVLINGKRL-------PGSAAMGGGAANINVIPSAIVERVE 146
Cdd:PRK13524 75 IIRTmPGVNLTGnSTSGQRGNNRQ----IDIRGMGPENTLILIDGKPVssrnsvrYGWRGERDTRGDTNWVPPEMIERIE 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 147 VMADGGSAVYGSDAVAGVVNIILK---DEFDGiNVTVGSGIP--SQEGGDEQnvafvmgtsgekgnimfsfehdskdeiy 221
Cdd:PRK13524 151 VLRGPAAARYGNGAAGGVVNIITKkptGEWHG-SWNTYFNAPehKAEGATKR---------------------------- 201
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 222 qrdrdylssTNtgsdnyFDMSGvsiygrnvyhngelkalkgydtdatcdsskgfvgltnypGLGDICGYDYTSEAAQTAS 301
Cdd:PRK13524 202 ---------TN------FSLSG---------------------------------------PLGDELSFRLYGNLNKTQA 227
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 302 lerntvfvngniflnDDTTFNAQVLLNRNesfGRYA--PAAGWFEVDPTTSGGS---DFFTENGLDPAAGparvYYRFNN 376
Cdd:PRK13524 228 ---------------DAWDINQGHQSART---GSYAgtLPAGREGVINKDINGLlrwDFAPLQSLELEAG----YSRQGN 285
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 377 V--GTRDNNVTDFQADLKAGLD-GTLYTDSFgDVVWETGYQLNFSNSNEIGTGYVFRSP-AEQLANSGEfvnGEFSadaT 452
Cdd:PRK13524 286 LyaGDTQNTNSDALVKSLYGKEtNRMYRQNY-ALTHRGGWDNGVSTSNYAQYEHTRNSRlPEGLAGGTE---GIFN---E 358
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 453 SDLAAGTSRETQMEMHnfygglqfdlaeiGDVTIP--------VYIGAEFTTYDYFDQYD---PQSEAGNIIG--SSGNS 519
Cdd:PRK13524 359 KATQFSTIDLDDVMLH-------------SEVNLPfdllvnqtLTLGTEWNQQRMKDPSSntqALTSGGAIPGvsATGRS 425
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 520 AGGDRETYALYAESLIAFTDELEMNIAARYDHYSDFGSEISPKASFRYQPLDNLMFRTGAGMGFRAPtlaNLYGADSfsa 599
Cdd:PRK13524 426 PYSKAEIFSLFAEDNMELTDSTMLTPGLRFDHHSIVGNNWSPSLNLSQGLGDDFTLKMGIARAYKAP---NLYQTNP--- 499
|
650 660 670 680
....*....|....*....|....*....|....*....|....*....
gi 497393738 600 deakDYV-YCQANGISdADCPETQYdvtRTSNEDLDAETSVSFNFGVSY 647
Cdd:PRK13524 500 ----NYIlYSKGQGCY-ASAGNGCY---LQGNDDLKAETSVNKEIGLEF 540
|
|
| PRK13528 |
PRK13528 |
outer membrane receptor FepA; Provisional |
5-686 |
1.15e-14 |
|
outer membrane receptor FepA; Provisional
Pssm-ID: 237413 [Multi-domain] Cd Length: 727 Bit Score: 78.26 E-value: 1.15e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 5 TTALSVAISLALGTAAVAPLAAQAEEQQVEKLQkMKVTGSRltraSMEGSTPVAVIGRAEIERAGDVS-IADVLRK-SSF 82
Cdd:PRK13528 6 NKILWLLTVLLVGLNSPVSAAESSDDDNGETMV-VEATAEQ----ELKQQPGVSIITAEDIKKRPPVNdLSDIIRKmPGV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 83 NSFG-SHSERSGSSAQsqatISLRGLGSERTLVLINGKrlPGSAAMG---------GGAANINVIPSAIVERVEVMADGG 152
Cdd:PRK13528 81 NLTGnSASGTRGNNRQ----IDIRGMGPENTLILIDGV--PVTSRNSvryswrgerDTRGDTNWVPPEMVERIEVIRGPA 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 153 SAVYGSDAVAGVVNIILK---DEFDGiNVTVGSGIP-SQEGGDEQNVAFVMgtSGEKGNIMFSFehdskdeiyqrdRDYL 228
Cdd:PRK13528 155 AARYGSGAAGGVVNIITKrptNDWHG-SLSLYTNQPeSSKEGATRRANFSL--SGPLAGDALTM------------RLYG 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 229 SSTNTGSDNyFDMsgvsiygrNVYHNGELKAlkgydtdatcdsskGFVGLTNypglGDICG---YDYTSEaaQTASLE-- 303
Cdd:PRK13528 220 NLNKTDADS-WDI--------NSSAGTKNAA--------------GREGVRN----KDINGvlsWKMTPQ--QILDFEag 270
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 304 --RntvfvNGNIFlnddttfnaqvllnrnesfgryapaAGwfevDPTTSGGSDFftENGLDPAAGPARVYYRfNNVGTRD 381
Cdd:PRK13528 271 ysR-----QGNIY-------------------------AG----DTQNSNSSAV--TESLAKSGKETNRLYR-QNYGLTH 313
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 382 NNVTDFqadlkagldGTLytdsfgdvvwETGYQLNFSNSNEIGTGyvfrspaeqLANSGEfvnGEFSADATSDlaagTSR 461
Cdd:PRK13528 314 NGIWDW---------GQS----------RLGFYYEKTNNTRMNEG---------LAGGGE---GRITADQTFT----TSR 358
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 462 etqMEMHNFYGGLQFDLAEIGDVTIPVyiGAEFtTYDYFDqyDPQS-----EAGNIIGSSGNSAGGD----RETYALYAE 532
Cdd:PRK13528 359 ---LESYRTSGELNVPLNWLFEQTLTV--GAEW-NRDELN--DPSStsltvKDGDIGGISGSAADRSsknkSEISALYVE 430
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 533 SLIAFTDELEMNIAARYDHYSDFGSEISPKASFRYQPLDNLMFRTGAGMGFRAPtlaNLYGADsfsadeaKDYV-YCQAN 611
Cdd:PRK13528 431 DNIEPVPGTNLIPGLRFDYHSEFGSNWSPSLNLSQELGDYFKVKAGIARAFKAP---NLYQSS-------EGYLlYSRGN 500
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 612 GisdadCPETQ-----YDVtrtSNEDLDAETSVSFNFGVSYSPiEDLDLTL-----DYYN--ISIDDVITLNSLQSMIDQ 679
Cdd:PRK13528 501 G-----CPKDItsggcYLV---GNKNLDPEISVNKEIGLEFTV-DDYHASVtyfrnDYQNkiVAGDDVIGRTASGAYILQ 571
|
....*..
gi 497393738 680 ERSSGVA 686
Cdd:PRK13528 572 WQNGGKA 578
|
|
| PRK13483 |
PRK13483 |
ligand-gated channel protein; |
102-866 |
6.20e-14 |
|
ligand-gated channel protein;
Pssm-ID: 184080 [Multi-domain] Cd Length: 660 Bit Score: 75.58 E-value: 6.20e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 102 ISLRGLGSERTLVLINGKRlpgsAAMGGGAANIN--------VIPSAIVERVEVMADGGSAVYGSDAVAGVVNIILK--- 170
Cdd:PRK13483 91 ISLRGMGSQYTLILVDGKR----QSSRETRPNSDgpgveqawTPPLAAIERIEVIRGPMSSLYGSDAIGGVINIITRkvp 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 171 DEFDGiNVTVGSGIpsQEggdeqnvafvmgtSGEKGNimfsfehdskdeIYQrdrdylsstntgsDNYF-------DMSG 243
Cdd:PRK13483 167 NEWQG-EVRLDTTL--QE-------------NSDSGN------------VYQ-------------ANFFvngplikDLLG 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 244 VSIYGrNVYHNGELKALKGY-DTDATCDSSKgfVGLTNYPglgdicGYDYTSEAAQTASLERNTVfvngniflnddttfn 322
Cdd:PRK13483 206 LQLYG-QYTQREEDDIEGGYrDKDARSLTAK--LALTPNE------DHDIMLEVGTSNQERDSTV--------------- 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 323 aqvllnrnesfGRYAPAAGWFEVDPTTSGGSDFFTEngldpaagparvyYRFNNVGtrdnnvtdfqadlkagldgtlytd 402
Cdd:PRK13483 262 -----------GKTVAPLAPGESCGRRGCPESSTTE-------------YERSTVS------------------------ 293
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 403 sfgdvVWETGyQLNFSNSNEigtgYVFRSPAEQLANSGEFVNgefsADATSDLAAGTSREtqmemHNfygglqfdlaeig 482
Cdd:PRK13483 294 -----LSHTG-RWDFGTSDT----YIQHEEFDNKSREMKIKN----TDFQSSLVAPLGQE-----HT------------- 341
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 483 dvtipVYIGAEFTTYDYFDQydpqseAGNIIgSSGNSAggDRETYALYAESLIAFTDELEMNIAARYDHYSDFGSEISPK 562
Cdd:PRK13483 342 -----LTFGAAYNHQDLTDE------TSNQI-SDLTDI--SRTQWAVFSEDEWRIADDFALTGGLRLDHDENFGGHVSPR 407
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 563 ASFRYQPLDNLMFRTGAGMGFRAPTL-------------ANLYGadsfsadeakdyvycqangisdadcpetqydvtrts 629
Cdd:PRK13483 408 VYGVWNLAPSWTVKGGVSTGFRAPSLrqttpdwgqvsrgGNIYG------------------------------------ 451
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 630 NEDLDAETSVSFNFGVSYSPIEDLDLTLDYYNISIDDVITLNSLQSMIdqerssGVANPN-IERDATGRIT---HATAGL 705
Cdd:PRK13483 452 NPDLKPETSLNKELGLYYDLGSGLTASLTVFYNEFKDKITRVACPATQ------CTDGPNqFGADPTTYVNideAVTQGV 525
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 706 E-NLGTLDTSGLDLKVGYRYDfDSavlrydfmgsyvlDYSAPEYVNGPVNNqvgrngLPEYRFNTGVGLNFLEEHDVYLS 784
Cdd:PRK13483 526 EaSLSYPITSTLSLSGNYTYT-DS-------------EQKSGAYKGSPLNQ------LPKHLFQASLNWEPTDRLNSWAR 585
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 785 ADYIASQAQDVDENYNKTGNIPSQTIWNVAYNYLAPWDAKFTAGVRNLTDEDpafesdgVTYDADLYSIQGRVYFVKYSQ 864
Cdd:PRK13483 586 VNYRGEESQPTTGPSSSSFIAPSYTFLDLGANYQLTDNLKLSAGIYNLFDKE-------INYEEYGYVEDGRRYWLGMTY 658
|
..
gi 497393738 865 NF 866
Cdd:PRK13483 659 SF 660
|
|
| PRK13484 |
PRK13484 |
IreA family TonB-dependent siderophore receptor; |
32-863 |
5.09e-13 |
|
IreA family TonB-dependent siderophore receptor;
Pssm-ID: 139605 [Multi-domain] Cd Length: 682 Bit Score: 72.73 E-value: 5.09e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 32 QVEKLQKMKVTGSRLTRASMEGSTPVAVIGRAEIERAGDVSIADVLRKSSFNSFGSHSERSgssaqsqaTISLRGLGSER 111
Cdd:PRK13484 26 SDKKEDTLVVTASGFTQQLRNAPASVSVITSEQLQKKPVSDLVDAVKDVEGISITGGNEKP--------DISIRGLSGDY 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 112 TLVLINGKRLPGSAAMGGGAANIN---VIPSAIVERVEVMADGGSAVYGSDAVAGVVNIILKDefdgINVTVGSGIPSQE 188
Cdd:PRK13484 98 TLILVDGRRQSGRESRPNGSGGFEagfIPPVEAIERIEVIRGPMSSLYGSDAIGGVINIITKP----VNNQTWDGVLGLG 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 189 GgdeqnvafvmgtsgekgnimfsfehdskdeIYQRDRDYLSSTNtgsdNYFDMSGVSIygrnvyhngelkalkgydtdat 268
Cdd:PRK13484 174 G------------------------------IIQEHGKFGNSTT----NDFYLSGPLI---------------------- 197
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 269 cdssKGFVGLTNYPGLgdicgyDYTSEAAQTASLERNTvfvNGNIF--LNDDTTFNAQVLLnrneSFGRYApaagwfEVD 346
Cdd:PRK13484 198 ----KDKLGLQLYGGM------NYRKEDSISQGTPAKD---NKNITatLQFTPTESQKFVF----EYGKNN------QVH 254
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 347 PTTSGGS-DFFTENG--LDPAAGPARVYYRFNNVGTRDNNVTDFQADLKAGLDGTLYTDSFGDVVWETGYQLNFSNsnei 423
Cdd:PRK13484 255 TLTPGESlDAWTMRGnlKQPNSKRETHNSRSHWVAAWNAQGEILHPEIAVYQEKVIREVKSGKKDKYNHWDLNYES---- 330
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 424 gtgyvfRSPaeqlansgEFVNGEFSADATSDLAagtsrETQMEmhnfYGGlQFDLAEIgdvtipvyigaefttydyfdqY 503
Cdd:PRK13484 331 ------RKP--------EITNTIIDAKVTAFLP-----ENVLT----IGG-QFQHAEL---------------------R 365
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 504 DPQSEAGNIIGSSGNSAggdrETYALYAESLIAFTDELEMNIAARYDHYSDFGSEISPKASFRYQPLDNLMFRTGAGMGF 583
Cdd:PRK13484 366 DDSATGKKTTETQSVSI----KQKAVFIENEYAATDSLALTGGLRLDNHEIYGSYWNPRLYAVYNLTDNLTLKGGIAKAF 441
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 584 RAPTLANLYGADSFSADEAKDYVYcqangisdadcpetqydvtrtSNEDLDAETSVSFNFGVSYSPIEDLDLTLDYYNIS 663
Cdd:PRK13484 442 RAPSIREVSPGFGTLTQGGASIMY---------------------GNRDLKPETSVTEEIGIIYSNDSGFSASATLFNTD 500
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 664 IDDVITlnslqsmidqERSSGVANPnierdATGRITHAtagLENLGTLDTSGLDLKVGYR-YDFDSAVLRYDFMGSYvlD 742
Cdd:PRK13484 501 FKNKLT----------SYDIGTKDP-----VTGLNTFI---YDNVGEANIRGVELATQIPvYDKWHVSANYTFTDSR--R 560
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 743 YSAPEYVNGPVNNQVGRNGLPEYRFNTGVGLNFLEEHDVYLSADYIASQAQDVDENYNKTGNIPSQ-TIWNVAYNYLAPW 821
Cdd:PRK13484 561 KSDDESLNGKSLKGEPLERTPRHAANAKLEWDYTQDITFYSSLNYTGKQIWAAQRNGAKVPRVRNGfTSMDIGLNYQILP 640
|
810 820 830 840
....*....|....*....|....*....|....*....|....*
gi 497393738 822 DAKFTAGVRNLTDE-DPAFESDGVTYDADlysiQGRVYF--VKYS 863
Cdd:PRK13484 641 DTLINFAVLNVTDRkSEDIDTIDGNWQVD----EGRRYWanVRVS 681
|
|
| TonB-hemin |
TIGR01785 |
TonB-dependent heme/hemoglobin receptor family protein; This model represents the ... |
36-866 |
7.85e-13 |
|
TonB-dependent heme/hemoglobin receptor family protein; This model represents the TonB-dependent outer membrane heme/hemoglobin receptor/transporter found in bacteria which live in contact with animals (which contain hemoglobin or other heme-bearing globins) or legumes (which contain leghemoglobin). Some species having hits to this model such as Nostoc, Caulobacter and Chlorobium do not have an obvious source of hemoglobin-like proteins in their biological niche and so the possibility exists that they act on some other substance. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273807 [Multi-domain] Cd Length: 665 Bit Score: 72.04 E-value: 7.85e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 36 LQKMKVTGSRLTRASMEGSTPVAVIGRAEIERAGDVSIADVLRKSSFNSFgshserSGSSAQSQATISLRGLGSERTLVL 115
Cdd:TIGR01785 1 LDTVTVTATRTRQVLSEAPASVSVISGEQIESKQANNLADALNTVPGVDV------TGGGRPPGQSINIRGLQDNRVLVV 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 116 INGKRLPGSAAMGGGaaNINVIPSAIVERVEVMADGGSAVYGSDAVAGVVNIILKDEFDGINvtvgsgiPSQEGGDEQNV 195
Cdd:TIGR01785 75 VDGARQNYQRGGAHN--GSLFVDPELLKRIEIVKGPSSSLYGSGALGGVVAFRTKDAADLLR-------PGQLFGGLAKL 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 196 AFVMGTSGEKGNIMFSFEHDSKDEIyqrdrdYLSSTNTGSDNYFDMSGVSIYGRNVYHNGelkaLKGYDTDATCDSSKGf 275
Cdd:TIGR01785 146 SYGSNNNSFGGSVAVAGRLDDNLDA------LVAATYRDGGNYRNGNKEEATNSAYVQKN----LLAKLGWQLDDAQRL- 214
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 276 vgltnypGLGDIcgYDYTSEAAQTaslerntvfvngNIFLNDDttfnaqvllnrnesfgrYAPAAGWFEVDPTTSGGSDF 355
Cdd:TIGR01785 215 -------EFSYF--TTEGSLDEAQ------------NSGPGTE-----------------YVLGSSSTLLASSTRDRSAT 256
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 356 FTENGLDPaagparvyyrfnnvgtrDNNVTDFQADLkagldgtlytdsfgdvvwetgyqlnFSNSNEigtgyvfrsPAEQ 435
Cdd:TIGR01785 257 LTYNWTPE-----------------DNPWLDATASL-------------------------YYNRTE---------NDND 285
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 436 LANSGEFVNGEFSADATSDLAAGTSRETQMEMHNFYGGLQFdlaeigdvtipvyigaefttydYFDQYDPQSEAGNIIGS 515
Cdd:TIGR01785 286 RSARGVGREEGYQYTTYGATLQNTSRFDVASWSTLTYGVDW----------------------MKDKRRTESFDPNSVTT 343
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 516 S-GNSAGGDRETYALYAESLIAFTDE-LEMNIAARYDHYS------------DFG-SEISPKASFRYQPLDNLMFRTGAG 580
Cdd:TIGR01785 344 IvPNPPSAKEYFFGLFLQDNIPLLDDrLTLSAGLRYDHYKlspkttadteavDRSySRWSPSLGLSYKPVDWLTLYASYS 423
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 581 MGFRAPTLANLYGAdsfsadeakdyvycqangiSDADCPETQYdvTRTSNEDLDAETSVSFNFG--VSYSPI----EDLD 654
Cdd:TIGR01785 424 QGFRAPSIDELYGT-------------------GDHPGTPGGY--TFAPNPNLKPETSKTWELGanLSFDNLlldnDQLQ 482
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 655 LTLDYYNISIDDVITLNslqsmidqersSGVANPnierdATGRITHATAGLENLGTlDTSGLDLKVGYrydfDSAVLRYD 734
Cdd:TIGR01785 483 FKVAYFYNDVKDFIDLT-----------IGVTDN-----VTAGMNNITQYVNIDGA-RIRGIEASASY----DAGLWATG 541
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 735 FMGSYVL--DYSAPEYVN--GPVNNQVGRNG-LPEYRFNTGVGLNFLEEHDVYLSADYIASQaqdvdeNYNKTgniPSQT 809
Cdd:TIGR01785 542 LSYGYTIgkDQNTNQWLSniPPLKLVVTVGYrFPDRRLDLGAKAAYYERQSESPTTEDVAAN------GLLTT---PGYT 612
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....*....
gi 497393738 810 IWN--VAYNYLAPWDAKFTAGVRNLTDEdpafesDGVTYDADLYSIQGRVYFVKYSQNF 866
Cdd:TIGR01785 613 VVDlyATYQPNAVKGLTVRFGVNNLTDR------KYTPAQSVPGAGPGRNFKGSVKYQF 665
|
|
| PRK13486 |
PRK13486 |
TonB-dependent receptor; |
39-866 |
9.83e-13 |
|
TonB-dependent receptor;
Pssm-ID: 139606 [Multi-domain] Cd Length: 696 Bit Score: 71.98 E-value: 9.83e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 39 MKVTGSRLTRASMEGSTPVAVIGRAEIERAGDVSIADVLRKSSfnsfGSHSErSGSSAQSQATISLRGLGSERTLVLING 118
Cdd:PRK13486 28 MIVSASGYEKKLTNAAASVSVISQEELQSSQYHDLAEALRSVE----GVDVE-SGTGKTGGLEISIRGMPASYTLILIDG 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 119 KRLPGSAAMG---GGAANINVIPS-AIVERVEVMADGGSAVYGSDAVAGVVNIILKDEFDGINVTVGSGIPSQEGGDEQN 194
Cdd:PRK13486 103 VRQGGSSDVTpngFSAMNTGFMPPlAAIERIEVIRGPMSTLYGSDAMGGVVNIITRKNADKWLSSVNAGLNLQESNKWGN 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 195 VA-FVMGTSGEKgnIMFSFEHDSKDEIYQRDRDYLSSTN----------TGSDNYfdmsgvSIYGRNVYHNGELKALkGY 263
Cdd:PRK13486 183 SSqFNFWSSGPL--VDDSVSLQVRGSTQQRQGSSVTSLSdtaatripypTESQNY------NLGARLDWKASEQDVL-WF 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 264 DTDAT---CDSSKGFVG-LTNypglgdicGYDytseaaQTASLERNtvfvngNIFLNDDTTFnaqvllnrneSFGRYAPA 339
Cdd:PRK13486 254 DMDTTrqrYDNRDGQLGsLTG--------GYD------RTLRYERN------KISAGYDHTF----------TFGTWKSY 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 340 AGWFEvdpttsggsdffTENgldpaagPARVYYRfnNVGTRDnnvtdfqadlKAGLDGtlytdsfgdvvwetgyqlnfsn 419
Cdd:PRK13486 304 LNWNE------------TEN-------KGRELVR--SVLKRD----------KWGLAG---------------------- 330
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 420 sneigtgyvfrSPAEqLANSGEFVNGEFsadatsdlaagtsretqmemhnfygglqfdLAEIGDVTIpVYIGAEFttydy 499
Cdd:PRK13486 331 -----------QPRE-LKESNLILNSLL------------------------------LTPLGESHL-VTVGGEF----- 362
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 500 fdqYDPQSEAGNIIGSSGNSAggDRETYALYAESLIAFTDELEMNIAARYDHYSDFGSEISPKASFRYQPLDNLMFRTGA 579
Cdd:PRK13486 363 ---QSSSMKDGVVLASTGETF--RQKSWSVFAEDEWHLTDALALTAGSRYEHHEQFGGHFSPRAYLVWDVADAWTLKGGV 437
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 580 GMGFRAPTLANLYgadsfsadeakdyvycqaNGISDAdcpETQYDVTRTSNEDLDAETSVSFNFGVSYSPIEDLDLTLDY 659
Cdd:PRK13486 438 TTGYKAPRMGQLH------------------KGISGV---SGQGKTNLLGNPDLKPEESVSYEAGVYYDNPAGLNANVTG 496
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 660 YNISIDDVITLNSLQSMIDQERSSGVANpnierdatgrithaTAGLENLGTLDTSGLDLKVGYRYDFDSAVLRYDFMGSY 739
Cdd:PRK13486 497 FMTDFSNKIVSYSINDNTNSYVNSGKAR--------------LHGVEFAGTLPLWSEDVTLSLNYTWTRSEQRDGDNKGA 562
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 740 VLDYSAPEYVNGPVNNQVgrnglpeyrfntgvglnfLEEHDVYLSADYiASQAQDVDENYN------------KTGNIPS 807
Cdd:PRK13486 563 PLSYTPEHMVNAKLNWQI------------------TEEVASWLGARY-RGKTPRFTQNYSslsavqkkvydeKGEYLKA 623
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 497393738 808 QTIWNVAYNYLAPWDAKFTAGVRNLTDEDPAFES-----DGVTYDADL---------YSIQGRVYFVKYSQNF 866
Cdd:PRK13486 624 WTVVDAGLSWKMTDALTLNAAVNNLLNKDYSDVSlysagKSTLYAGDYfqtgssttgYVIPERNYWMSLNYQF 696
|
|
| Fiu |
COG4774 |
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism]; |
55-836 |
3.16e-12 |
|
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];
Pssm-ID: 443806 [Multi-domain] Cd Length: 639 Bit Score: 70.29 E-value: 3.16e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 55 TP--VAVIGRAEIERAGDVSIADVLRKSSFNSFGSHSERSGSSaqsqatISLRGLGSeRTLVLINGKRLPGSaamgggaa 132
Cdd:COG4774 9 TPqsVTVVTRELIEDQGATSLADALRNVPGVTFGAGEGGNGDS------FSIRGFSA-SGDIYVDGLRDPGQ-------- 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 133 niNVIPSAIVERVEVMADGGSAVYGSDAVAGVVNIILK----DEFDGINVTVGSGipsqeggdeqnvafvmgtsgekgni 208
Cdd:COG4774 74 --YRRDTFNLERVEVLKGPASVLYGRGSPGGVINLVTKrptdEPFTEVTLTYGSD------------------------- 126
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 209 mfsfehdskdeiyqrdrDYLSSTntgsdnyFDMSGV---SIYGR-NVYHNgelkalkgyDTDAtcdsskgfvgltnypgl 284
Cdd:COG4774 127 -----------------GQRRAT-------LDVNGPlgdDLAYRlNGMYR---------DSDS----------------- 156
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 285 gdicGYDYtseaaqtASLERNTVFVNGNIFLNDDTTFNAQVLLNRNesfgRYAPAAGWfevdPTTSGGSdfftengldPA 364
Cdd:COG4774 157 ----YRDG-------VDNDRWGIAPSLTWRLGDRTRLTLDYEYQDD----DRTPDYGV----PAVANGR---------PV 208
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 365 AGPARVYY--RFNNVGTRDNNVT-----DFQADLKAGLdGTLYTDSFGDvvwetgyQLNFSNSNEIGTGYVFRSPAEQLA 437
Cdd:COG4774 209 DVDRSTFYgqPDDYSDSETDSATlrlehDFNDNWTLRN-ALRYSDYDRD-------YRNTYPTGGNATGTVTRSAYRRDQ 280
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 438 NSGEFVNgefSADATSDLAAGTSRetqmemHNFYGGlqfdlAEIGDVTIPVYIGAEFTTYDYFDQYDPQSEAGNI-IGSS 516
Cdd:COG4774 281 DNDTLSN---QTDLTGKFDTGGVK------HTLLAG-----VEYSREDSDNARYSGGGTAPTVNLYNPVYGAPVTgPTLG 346
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 517 GNSAGGDRETYALYAESLIAFTDELEMNIAARYDHY--------------SDFGSEISPKASFRYQPLDNLmfrtgagmg 582
Cdd:COG4774 347 GADNDSRTDTTGLYLQDTISLTDRWSLLAGLRYDRFdtdytdrttgattsSYDDSAFSPRAGLVYKPTPNL--------- 417
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 583 fraptlaNLYG--ADSFSadeakdyvycqangisdadcPETQYDVTRTSNEDLDAETSVSFNFGVSYSPIED-LDLTLDY 659
Cdd:COG4774 418 -------SLYAsySTSFN--------------------PGGGAPSLSNAGQALDPEKSRQYEVGVKWDLLDGrLSLTAAL 470
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 660 YNISIDDVITLN----SLQSMIDQERSSGvanpnIERDATGRIThataglenlgtldtSGLDLKVGYRYdfdsavlrydf 735
Cdd:COG4774 471 FRIEKTNVRTTDpanpGVYVQTGEQRSRG-----VELEATGELT--------------PGWSVLAGYTY----------- 520
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 736 mgsyvLDysaPEYVNGPVNNQVGR--NGLPEYRFNTGVGLNFLEEHdVYLSADYIASQAQDVDENYNKTgnIPSQTIWN- 812
Cdd:COG4774 521 -----LD---AEITKSANAANVGNrlPNVPRHSASLWTTYDLPLPG-LTLGGGVRYVGSRYADAANTVK--LPSYTRFDa 589
|
810 820
....*....|....*....|....*
gi 497393738 813 -VAYNYLAPWDakFTAGVRNLTDED 836
Cdd:COG4774 590 gASYRLNKNLT--LRLNVNNLTDKR 612
|
|
| FhuE |
COG4773 |
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ... |
6-836 |
2.12e-11 |
|
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];
Pssm-ID: 443805 [Multi-domain] Cd Length: 692 Bit Score: 67.61 E-value: 2.12e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 6 TALSVAISLALGTAAVAPLAAQAEEQQVEKLQKMKVTG----------------SRLTRASMEgsTP--VAVIGRAEIER 67
Cdd:COG4773 2 AALLAGSGLAAAAAGALAQAAAAAAAEATTLPEVTVTGtaegtggytakssstaTKLDTPLRE--TPqsVSVVTRQLIED 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 68 AGDVSIADVLRKSSfnsfGSHSERSGSSAQSQatISLRGLGSERtlVLINGKRLPGSAAMGggaaninvIPSAIVERVEV 147
Cdd:COG4773 80 QGATTLDDALRNVP----GVTVSSYDGGGRDS--FSIRGFSIDN--YLRDGLPLGGFGGGQ--------PDTANLERVEV 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 148 MADGGSAVYGSDAVAGVVNIILK---DEFDG-INVTVGSgipsqegGDEQNVAFVMGTS-GEKGNIMFSF--EHDSKDei 220
Cdd:COG4773 144 LKGPAGLLYGAGSPGGLVNLVTKrptAEPQGeVSLSAGS-------WDTYRATADVGGPlNEDGTLRYRLnaAYEDGD-- 214
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 221 YQRDRdylsstnTGSDNYFdmsgvsIYGrnvyhngelkALKGYDTDATC---------DSSKGFVGLtnYPGLGDICGYD 291
Cdd:COG4773 215 SFRDG-------VDNRRTL------IAP----------SLDWDLTDDTTltlgaeyqdDDSTGDRGF--LPLDGTLLDLP 269
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 292 ---YTSEAAQTASLERNTVFVNGNIFLNDDTTFNAQVLLNRNESFGRYAPAAGWFevdpttsggsdfftenglDPAAGPA 368
Cdd:COG4773 270 rstNLGEPWDYYDTETTTLFAELEHRFNDDWSLRANARYSDSDRDGRSAYAYGAP------------------DAATGTL 331
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 369 RVYYRFNNvgtRDNNVTDFQADLkagldgtlytdsfgdvvwetgyqlnfsnsneigtgyvfrspaeqlansgefvNGEFS 448
Cdd:COG4773 332 TRYASARD---GDSRSDSLDANL----------------------------------------------------NGKFE 356
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 449 ADA-TSDLAAGTSRETQmemhnfygglqfdlaeigdvtipvYIGAEFTTYDYFDQYDPQSEAGNIIGSSGNSAGGDRETY 527
Cdd:COG4773 357 TGGlEHTLLVGADYSRY------------------------DSDSDSATAGTINIYNPVYGNLPEPDFDASDTDTTTRQT 412
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 528 ALYAESLIAFTDELEMNIAARYDHYSDFG-------------SEISPKASFRYQPLDNLMfrtgagmgfraptlanLYG- 593
Cdd:COG4773 413 GLYAQDQISLTDRLSLLLGGRYDWYETDStnrlggsttsyddSAFTPRAGLVYDLTPGLS----------------LYAs 476
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 594 -ADSFSadeakdyvycqangisdadcPETQYDVtrtSNEDLDAETSVSFNFGVSYSPIED-LDLTLDYYNISIDDVIT-- 669
Cdd:COG4773 477 ySESFE--------------------PQSGADN---NGNPLDPETGKQYEAGVKGELFDGrLNATLAVFDITQKNVATtd 533
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 670 --LNSLQSMIDQERSSGvanpnIERDATGRITHataglenlgtldtsGLDLKVGYRYdFDSAVLRydfmgsyvldysAPE 747
Cdd:COG4773 534 pdNPNFYVQVGEVRSRG-----VELELSGELTP--------------GLNLIAGYTY-TDAKITK------------DAD 581
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 748 YVNGPVNNQVGR---NGLPEYRFNTGVGLNFleehDVYLSADYIASQAQDVDENYnktgNIPSQTIWN--VAYNYLAPWd 822
Cdd:COG4773 582 ALEGKRLTNVPRhtaSLWTTYRFPSGALKGL----GLGGGVRYVGERYGDAANTF----TLPSYTLVDagARYDLGKNW- 652
|
890
....*....|....
gi 497393738 823 aKFTAGVRNLTDED 836
Cdd:COG4773 653 -TLQLNVNNLFDKK 665
|
|
| PRK13513 |
PRK13513 |
ligand-gated channel protein; |
1-170 |
1.42e-09 |
|
ligand-gated channel protein;
Pssm-ID: 184104 [Multi-domain] Cd Length: 659 Bit Score: 61.71 E-value: 1.42e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 1 MYKNTTALSVAISLALGTAAVAPLAAQAEEQqveklqKMKVTGSRLTRASMEGSTPVAVIGRAEIERAGDVSIADVLRKS 80
Cdd:PRK13513 6 RKTHKAALVIAAAISSQAYAAEKTNTATPTD------TMVVTASGFQQRIQDAPASISVVTREQLENKAYRDVTDALKDV 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 81 S---FNSFGSHSErsgssaqsqatISLRGLGSERTLVLINGKRLPGSAAM-GGGAANIN---VIPSAIVERVEVMADGGS 153
Cdd:PRK13513 80 PgvvVTGGGSTSD-----------ISIRGMAAKYTLILVDGKRVDTRSTRpNSDGSGIEqgwLPPLAAIERIEVVRGPMS 148
|
170
....*....|....*..
gi 497393738 154 AVYGSDAVAGVVNIILK 170
Cdd:PRK13513 149 SLYGSDAMGGVINIITR 165
|
|
| TonB-siderophor |
TIGR01783 |
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ... |
57-866 |
4.51e-09 |
|
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273805 [Multi-domain] Cd Length: 651 Bit Score: 60.12 E-value: 4.51e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 57 VAVIGRAEIERAGDVSIADVLRKSSFNSFGShsersGSSAQSQATISLRGLGSERTL--VLINGKRLPGSAamgggaaNI 134
Cdd:TIGR01783 6 VSVITRQELEDQQAGSLSEALQRVPGVVVGG-----SGGTTQFGNITIRGFGLEVDIdnVYLDGVPLLSRG-------NL 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 135 NVIPSAIVERVEVMADGGSAVYGSDAVAGVVNIILK---DEFDGiNVTVGSGIPSQEGGdeqnvAFVMGTS-GEKGNIMF 210
Cdd:TIGR01783 74 AIVDPAMVERVEVLRGPASLLYGGSAPGGVINIVTKrpqDEPKG-SVTFGAGTRSGYRT-----AFDLGGPlGADGTFRG 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 211 SFEHDSKDEIYQRDRDylsstntGSDNYFDmSGVSIYGRNVyhNGELKALKGYDTDATCDSSKGFvgltnyPGLGDICGY 290
Cdd:TIGR01783 148 RLNGARQDGDSFYDGA-------GEETRLG-ATATDWQLDD--RTLLRLGAYYQKERDRGGYGGL------PASGGTSGR 211
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 291 DYTSEAAQTASLERNTvfvngniflnddttfnaqvllnrnesFGRYAPAAGWfevdpttsggsdfftengldpaagpaRV 370
Cdd:TIGR01783 212 DLSSDRYLGTSSNRNY--------------------------DDREYLSYGL--------------------------SL 239
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 371 YYRFNNVGTRDNNVTDFQADlkagldgtlyTDSFGDVVWetgyqlNFSNSNEIGTGYVFRSPAEQLANSGE-FVNGEFS- 448
Cdd:TIGR01783 240 EYQFNDVWTGKQNLRYSYFD----------TDSNQVQAS------GYSSDGGLFGRSLTVVNVKQDRVQIDaGLDGEFEt 303
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 449 ADATSDLAAGTSreTQMEMHNFYGGLqfdlaeiGDVTIPVYigaefttydyfdQYDPQSEAGNIIGSSGNSAGGDRETYA 528
Cdd:TIGR01783 304 GPIEHDLLLGVS--YGQRTTNRFNNT-------GYPSDNIY------------SLTATSSARTDIGDSPKDRALSSTTKA 362
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 529 L--YAESLIAFTDELEMNIAARYDH-------------YSDFGSEISPKASFRYQPLDNLMFRTGAGMGFRAPtlanlyg 593
Cdd:TIGR01783 363 LngVALQRILLADKWTLTLGGRYDSvdvksnngvagstGKRDDSQFTPSLGVAYKPTDDWSLYASYAESFKPG------- 435
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 594 adsfsadeaKDYVYCQANgisdadcpetqydvtrtSNEDLDAETSVSFNFGVSYSPIEDLDLTLDYYNISIDDVITLNS- 672
Cdd:TIGR01783 436 ---------GYYPKGAGN-----------------SGDILEPEKGKNYELGVRYDLGDSLLATAALFRITKDNQLVQDPv 489
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 673 ---LQSMIDQERSSGVanpniERDATGRITHATAGLENLGTLDTSGLDLKVGyRYDFDSAVLRYDFMGSYVLDYSAPeyv 749
Cdd:TIGR01783 490 ngtFSVNAGKTRNRGV-----ELEARGYLTPGLSLSAGYTYTDAEFTEDTNG-DTQGNTVPFVPKHTASLWASYAPP--- 560
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 750 ngpvnnqVGRNGLpeyrfNTGVGLNFLEEHDVYLsadyiasqaqdvdenyNKTGNIPSQTIWNVAYNYLAPWDAKFTA-- 827
Cdd:TIGR01783 561 -------VGDNGL-----TLGGGVQYTGKAYVDG----------------GNTGKVPSYTVVDLSVRYDLTKKKNLTLal 612
|
810 820 830
....*....|....*....|....*....|....*....
gi 497393738 828 GVRNLTDEDPAFESDGVTYDADLYSIQGRVYFVKYSQNF 866
Cdd:TIGR01783 613 NVNNLFDRDYYTSGYRWGPSAYIYPGAPRTVGLSVSYDF 651
|
|
| TonB-Xanth-Caul |
TIGR01782 |
TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane ... |
36-836 |
4.42e-05 |
|
TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane receptors which are found mainly in Xanthomonas and Caulobacter. These appear to represent the expansion of a paralogous family in that the 22 X. axonopodis (21 in X. campestris) and 18 C. crescentus sequences are more closely related to each other than any of the many TonB-dependent receptors found in other species. In fact, the Crescentus and Xanthomonas sequences are inseparable on a phylogenetic tree using a PAM-weighted neighbor-joining method, indicating that one of the two genuses may have acquired this set of receptors from the other. The mechanism by which this family is shared between Xanthomonas, a gamma proteobacterial plant pathogen and Caulobacter, an alpha proteobacterial aquatic organism is unclear. [Transport and binding proteins, Porins]
Pssm-ID: 273804 [Multi-domain] Cd Length: 845 Bit Score: 47.33 E-value: 4.42e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 36 LQKMKVTGsrlTRASMEGSTP--------VAVIGRAEIERAGDVSIADVLRKSSfnsfGSHSERSGSSAQsqaTISLRGL 107
Cdd:TIGR01782 1 LDAVQVTG---QRASLEKAIDakrdadsvVDVISAEDIGKLPDVNVAEALQRVP----GVSIERDQGEGR---YVSVRGL 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 108 GSERTLVLINGKRLPgSAAMGGGAANINVIPSAIVERVEV----MADggsavYGSDAVAGVVNIILKDEFD----GINVT 179
Cdd:TIGR01782 71 GPSYNRTTLNGRTIA-STDSGGRAFSLDLLPSELVSGVEVyktpTAD-----MDEGGIGGTVDLRTRSPFDydgrTLSGS 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 180 VGSGIPSQEGGDEQN--VAFVMG-TSGEKG-NIMFSFEHDSKDeiYQRDR-------DYLSSTNTGSDNYF--------- 239
Cdd:TIGR01782 145 AQGGYNDLAGKDKPGprGAASYSwTFGDGQfGVLLSASYQKRD--FAEDNvetenwgTYTSADGGAQGLYFprgvryrsy 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 240 ---------------------DMSGVSIYGRNVYHNGELKALKGYDTDATCDSSKGFVGLTNYPGLGDICGYDYTSEAAQ 298
Cdd:TIGR01782 223 rndrerkgvngslqwrpsdalELYLDTLYSKYDDDETRQQIEFRTLNGGSTVITSNQTATSGALVQGTVANLQILVEARY 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 299 TASLERNTVFVNGNIFLNDDTTFNAQVllnrneSFGRyapaaGWFEVDPTTSGGSDFFTENGLDPAAGPARVYYRFNNVG 378
Cdd:TIGR01782 303 NEEKETTTSLTLGGEWTGDRWTLDGDL------GYSK-----ATRDRPDRVTRFFTAPTPGYDFDYRGGPTLTLGTPADG 371
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 379 TRDNNVTDfqADLKAGLDGTLYTDSFGDVvwETGYQLNFS-----NSNEIGTGYVFRSPaeqlanSGEFVNGEFSADATS 453
Cdd:TIGR01782 372 DDASNYTN--PANGELRRTQISYQKAEDS--EDAAQLDATfdgpfTSLKFGVRYRRRDK------TNRGSRYRRSIIGAT 441
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 454 DLAAGTSRETQMEMHNFYGGLQFDLAEIgdvtipvyIGAEFTTYDYFDQYDPQSEAGNIIGSSGNSAGGDRE-TYALYAE 532
Cdd:TIGR01782 442 GASGLAGVPSDLAGAGLDGGLGGPLTGW--------DPADLDAFLNAARGDAAGGGTYTYASTAPNTYTVTEdTTAAYAM 513
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 533 SLIAFTDELEMNIAARYDH-------------YSDFGSEIS------------PKASFRYQPLDNLMFRTGAGMGFRAPT 587
Cdd:TIGR01782 514 ANFDTGLRLRGNVGVRYERtdqtsdgwqsqpaANGTGSVLVpvsadrdytdvlPSLNLAYDLTDDLVLRFAASKTITRPD 593
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 588 LANLYGADSFSADEakdyvycqangisdadcPETQYDVTRtSNEDLDAETSVSFNFGVSYSPIEDLDLTLDYYNISIDDV 667
Cdd:TIGR01782 594 FGDLAANTSLSDDG-----------------TGGTVTVSG-GNPDLKPYESDNLDLSLEWYFGPGGLLSAAVFYKDIKNF 655
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 668 ITLNSLQSMIDQERSSGVANPNIERDATGRITHATAGLEnlgtldtsgldlkVGYRYDFDSAVLRYD---FMGSY-VLDY 743
Cdd:TIGR01782 656 IVTTTSTETNDGGGGLVVAGVLVSRPVNGGKAGKIRGVE-------------LGYQQTFDFLPGPLSgfgVQANYtYVDS 722
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497393738 744 SAPEYVNGPVNNQVGRNGLPEYRFNTGVglnFLEEHD--VYLSADYIASQAQDVDenynkTGNIPSQTIWNVAYNYlapW 821
Cdd:TIGR01782 723 EADPSVDGVQRRKLPLPGLSKNTANATL---YYEKGGfsARLSYNYRSDYLLDVG-----GSNINRLDRYVDPRGQ---L 791
|
890 900
....*....|....*....|....*
gi 497393738 822 DA----------KFTAGVRNLTDED 836
Cdd:TIGR01782 792 DLsasyqvsdhlSLGLQASNLTNEP 816
|
|
| |
