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Conserved domains on  [gi|497306468|ref|WP_009620685|]
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MULTISPECIES: DUF1145 domain-containing protein [Pseudomonas]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF1145 super family cl11481
Protein of unknown function (DUF1145); This family consists of several hypothetical bacterial ...
 4-91 2.49e-16

Protein of unknown function (DUF1145); This family consists of several hypothetical bacterial proteins of unknown function.


The actual alignment was detected with superfamily member COG3776:

Pssm-ID: 472200  Cd Length: 91  Bit Score: 67.25  E-value: 2.49e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497306468  4 FVGLGKLVALLFWLAVLANLLHPFAHPFATLLKVAGGLILLIHIVELLALGARL--KGRSSPWLDRIQVLLFGIFHFLSL 81
Cdd:COG3776   2 LINLGRLLMLFVWGFLLLNLVHPFPKPLNIFLNVALGFMVLMHGLQLLLLKGTLpkDGPKLSKWDQLRIFLFGVFELLAW 81

                        90
                ....*....|
gi 497306468 82 PAPAKEGGHA 91
Cdd:COG3776  82 QKKLKAQQKA 91
 
Name Accession Description Interval E-value
YhhL COG3776
Uncharacterized conserved protein YhhL, DUF1145 family [Function unknown];
4-91 2.49e-16

Uncharacterized conserved protein YhhL, DUF1145 family [Function unknown];


Pssm-ID: 442990  Cd Length: 91  Bit Score: 67.25  E-value: 2.49e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497306468  4 FVGLGKLVALLFWLAVLANLLHPFAHPFATLLKVAGGLILLIHIVELLALGARL--KGRSSPWLDRIQVLLFGIFHFLSL 81
Cdd:COG3776   2 LINLGRLLMLFVWGFLLLNLVHPFPKPLNIFLNVALGFMVLMHGLQLLLLKGTLpkDGPKLSKWDQLRIFLFGVFELLAW 81

                        90
                ....*....|
gi 497306468 82 PAPAKEGGHA 91
Cdd:COG3776  82 QKKLKAQQKA 91
DUF1145 pfam06611
Protein of unknown function (DUF1145); This family consists of several hypothetical bacterial ...
 3-60 3.79e-09

Protein of unknown function (DUF1145); This family consists of several hypothetical bacterial proteins of unknown function.


Pssm-ID: 429030  Cd Length: 58  Bit Score: 48.00  E-value: 3.79e-09
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 497306468   3 AFVGLGKLVALLFWLAVLANLLHPFAHPFATLLKVAGGLILLIHIVELLALGARLKGR 60
Cdd:pfam06611  1 MLINLGKLLMLGFWGVLLFNLVHPFPGPLNIFLNIAGGFLVLMHGLQLLLFKAALKKR 58
PRK10910 PRK10910
DUF1145 family protein;
4-80 6.88e-05

DUF1145 family protein;


Pssm-ID: 182831  Cd Length: 89  Bit Score: 37.68  E-value: 6.88e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497306468  4 FVGLGKLVALLFWLAVLANLLHPFAHPFATLLKVAGGLILLIHIVELLALGARLkGRSSPWLDRIQ---VLLFGIFHFLS 80
Cdd:PRK10910  2 LINLGRLLMLCVWGFLILNLVHPFPRPLNIFVNVALIFMVLMHGLQLALLKSTQ-PKDGPQLSGLEqvrIFLFGVFELLA 80
 
Name Accession Description Interval E-value
YhhL COG3776
Uncharacterized conserved protein YhhL, DUF1145 family [Function unknown];
4-91 2.49e-16

Uncharacterized conserved protein YhhL, DUF1145 family [Function unknown];


Pssm-ID: 442990  Cd Length: 91  Bit Score: 67.25  E-value: 2.49e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497306468  4 FVGLGKLVALLFWLAVLANLLHPFAHPFATLLKVAGGLILLIHIVELLALGARL--KGRSSPWLDRIQVLLFGIFHFLSL 81
Cdd:COG3776   2 LINLGRLLMLFVWGFLLLNLVHPFPKPLNIFLNVALGFMVLMHGLQLLLLKGTLpkDGPKLSKWDQLRIFLFGVFELLAW 81

                        90
                ....*....|
gi 497306468 82 PAPAKEGGHA 91
Cdd:COG3776  82 QKKLKAQQKA 91
DUF1145 pfam06611
Protein of unknown function (DUF1145); This family consists of several hypothetical bacterial ...
 3-60 3.79e-09

Protein of unknown function (DUF1145); This family consists of several hypothetical bacterial proteins of unknown function.


Pssm-ID: 429030  Cd Length: 58  Bit Score: 48.00  E-value: 3.79e-09
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 497306468   3 AFVGLGKLVALLFWLAVLANLLHPFAHPFATLLKVAGGLILLIHIVELLALGARLKGR 60
Cdd:pfam06611  1 MLINLGKLLMLGFWGVLLFNLVHPFPGPLNIFLNIAGGFLVLMHGLQLLLFKAALKKR 58
PRK10910 PRK10910
DUF1145 family protein;
4-80 6.88e-05

DUF1145 family protein;


Pssm-ID: 182831  Cd Length: 89  Bit Score: 37.68  E-value: 6.88e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497306468  4 FVGLGKLVALLFWLAVLANLLHPFAHPFATLLKVAGGLILLIHIVELLALGARLkGRSSPWLDRIQ---VLLFGIFHFLS 80
Cdd:PRK10910  2 LINLGRLLMLCVWGFLILNLVHPFPRPLNIFVNVALIFMVLMHGLQLALLKSTQ-PKDGPQLSGLEqvrIFLFGVFELLA 80
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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