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Conserved domains on  [gi|497295141|ref|WP_009609358|]
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MULTISPECIES: basic amino acid/polyamine antiporter [Eggerthella]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
2A0302 super family cl30120
transporter, basic amino acid/polyamine antiporter (APA) family; This family includes several ...
14-488 5.79e-132

transporter, basic amino acid/polyamine antiporter (APA) family; This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions. [Transport and binding proteins, Amino acids, peptides and amines]


The actual alignment was detected with superfamily member TIGR00905:

Pssm-ID: 129983  Cd Length: 473  Bit Score: 390.96  E-value: 5.79e-132
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141   14 AQDSSKKVGLIGLVGIVISAMIGGGIYNLPQNMAADASAGAIIIAWVVTGIGIWFIANTFRILSAARPELTNGLYTYAEK 93
Cdd:TIGR00905   2 SEAKSKKLGLFALTALVIGSMIGSGIFSLPQNLASVAGPGAVIIGWIITGVGMLALAFVFAILATKKPELDGGIYAYARE 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141   94 GFGKLIGFFVAYGYWICNCFALVAYSVLVMATLNYFVPDFTGGNNIPSIIGGSIITWIMYLLALRGAKSTSFLNIIGTIG 173
Cdd:TIGR00905  82 GFGPYIGFMSGWGYWLSAWIGNVAYAVLLFSALGYFFPLFGSGNPVPSILGASVLLWVFTFLVLRGVRQAAFINTITTIA 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141  174 KLLPVFIFILAVATVFKFSVFMEGFWGmkdgvALTLDFSNVMPQVSSTMLVTLWLFLGIEGAVVVSGKAKSQAAVRKATT 253
Cdd:TIGR00905 162 KLIPLFLFIIIGWFWFKLDLFTADFWG-----HDVPSLGSVFSQVKNTMLVTLWVFIGIEGAVVSSGRAKNKSDVGKATV 236
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141  254 IGFLVTLALYIVVSLLPLGVYSQAEVGSMADPSMAAIMLKSFGKWGEIMVNAGVIVSVLSSWLVWMLMLGEMPLAASKSG 333
Cdd:TIGR00905 237 LGTLGALVIYILITLLSLGVLPQQELANLPNPSMAAVLEMIVGKWGAVLISLGLIISVLGSLLSWTMLAAEVPFSAAKDG 316
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141  334 IFPKMFVKENKNGSPSTSLLWTTIVVQVVLIIsFFIGNNAWTTMISITSVMALPCYFFCTLFLFKIAVKKEYPSgifASR 413
Cdd:TIGR00905 317 LFPKIFGRVNKNGAPSVALLLTNILIQLFLLL-TLLTSSAYNVLVSLAVVMILVPYLLSAAYLLKLAKVGTYPK---IKN 392
                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 497295141  414 GMAVFTGAAGSLYGLWLIYAAGLNYLMVACIVYAIGLPLYIVGVRQHDRQaklFEKRSDKVILAVVLALGIAGLI 488
Cdd:TIGR00905 393 RKALIVGVIACVYSIWLLYAAGLKYLLLGFILYAPGIIFYGRARKERGKH---VFNKKEILIATIIVIAAIIAIW 464
 
Name Accession Description Interval E-value
2A0302 TIGR00905
transporter, basic amino acid/polyamine antiporter (APA) family; This family includes several ...
14-488 5.79e-132

transporter, basic amino acid/polyamine antiporter (APA) family; This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions. [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 129983  Cd Length: 473  Bit Score: 390.96  E-value: 5.79e-132
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141   14 AQDSSKKVGLIGLVGIVISAMIGGGIYNLPQNMAADASAGAIIIAWVVTGIGIWFIANTFRILSAARPELTNGLYTYAEK 93
Cdd:TIGR00905   2 SEAKSKKLGLFALTALVIGSMIGSGIFSLPQNLASVAGPGAVIIGWIITGVGMLALAFVFAILATKKPELDGGIYAYARE 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141   94 GFGKLIGFFVAYGYWICNCFALVAYSVLVMATLNYFVPDFTGGNNIPSIIGGSIITWIMYLLALRGAKSTSFLNIIGTIG 173
Cdd:TIGR00905  82 GFGPYIGFMSGWGYWLSAWIGNVAYAVLLFSALGYFFPLFGSGNPVPSILGASVLLWVFTFLVLRGVRQAAFINTITTIA 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141  174 KLLPVFIFILAVATVFKFSVFMEGFWGmkdgvALTLDFSNVMPQVSSTMLVTLWLFLGIEGAVVVSGKAKSQAAVRKATT 253
Cdd:TIGR00905 162 KLIPLFLFIIIGWFWFKLDLFTADFWG-----HDVPSLGSVFSQVKNTMLVTLWVFIGIEGAVVSSGRAKNKSDVGKATV 236
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141  254 IGFLVTLALYIVVSLLPLGVYSQAEVGSMADPSMAAIMLKSFGKWGEIMVNAGVIVSVLSSWLVWMLMLGEMPLAASKSG 333
Cdd:TIGR00905 237 LGTLGALVIYILITLLSLGVLPQQELANLPNPSMAAVLEMIVGKWGAVLISLGLIISVLGSLLSWTMLAAEVPFSAAKDG 316
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141  334 IFPKMFVKENKNGSPSTSLLWTTIVVQVVLIIsFFIGNNAWTTMISITSVMALPCYFFCTLFLFKIAVKKEYPSgifASR 413
Cdd:TIGR00905 317 LFPKIFGRVNKNGAPSVALLLTNILIQLFLLL-TLLTSSAYNVLVSLAVVMILVPYLLSAAYLLKLAKVGTYPK---IKN 392
                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 497295141  414 GMAVFTGAAGSLYGLWLIYAAGLNYLMVACIVYAIGLPLYIVGVRQHDRQaklFEKRSDKVILAVVLALGIAGLI 488
Cdd:TIGR00905 393 RKALIVGVIACVYSIWLLYAAGLKYLLLGFILYAPGIIFYGRARKERGKH---VFNKKEILIATIIVIAAIIAIW 464
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
12-470 2.28e-56

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 193.96  E-value: 2.28e-56
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141  12 SSAQDSSKKVGLIGLVGIVISAMIGGGIYNLPQNMAADAsAGAIIIAWVVTGIGIWFIANTFRILSAARPElTNGLYTYA 91
Cdd:COG0531    4 GESSELKRKLGLFDLVALGVGAIIGAGIFVLPGLAAGLA-GPAAILAWLIAGLLALLVALSYAELASAFPR-AGGAYTYA 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141  92 EKGFGKLIGFFVAYGYWICNCFALVAYSVLVMATLNYFVPDftggnnIPSIIGGSIITWIMYLLALRGAKSTSFLNIIGT 171
Cdd:COG0531   82 RRALGPLLGFLAGWALLLSYVLAVAAVAVAFGGYLSSLFPA------GGSVLIALVLILLLTLLNLRGVKESAKVNNILT 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141 172 IGKLLPVFIFILAVATVFKFSVFMEgFWGMKDGVALTLdfsnvmpqvsSTMLVTLWLFLGIEGAVVVSGKAK-SQAAVRK 250
Cdd:COG0531  156 VLKLLVLLLFIVVGLFAFDPANFTP-FLPAGGGLSGVL----------AALALAFFAFTGFEAIANLAEEAKnPKRNIPR 224
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141 251 ATTIGFLVTLALYIVVSLLPLGVYSQAEVGSMADPsMAAIMLKSFGKWGEIMVNAGVIVSVLSSWLVWMLMLGEMPLAAS 330
Cdd:COG0531  225 AIILSLLIVGVLYILVSLALTGVVPYDELAASGAP-LADAAEAVFGPWGAILIALGALLSLLGALNASILGASRLLYAMA 303
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141 331 KSGIFPKMFVKEN-KNGSPSTSLLWTTIVVQVVLIisffIGNNAWTTMISITSVMALPCYFFCTLFLFKIAVKKEYPSGI 409
Cdd:COG0531  304 RDGLLPKVFAKVHpRFGTPVNAILLTGVIALLLLL----LGAASFTALASLASVGVLLAYLLVALAVIVLRRRRPDLPRP 379
                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 497295141 410 FasRGMAVFTGAAGSLYGLWLIYAAGLNYLMVACIVYAIGLPLYIVGVRQHDRQAKLFEKR 470
Cdd:COG0531  380 F--RVPLPLIPILGILLCLFLLYLLGPGALLIGLVLLAIGLLLYLLYRRRHPKLLKEAEEE 438
AA_permease_2 pfam13520
Amino acid permease;
22-418 1.67e-31

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 125.89  E-value: 1.67e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141   22 GLIGLVGIVISAMIGGGIYNLPQNmaadASAGAIIIAWVVTGIGIWFIANTFRIL-SAARPELTNGLYTYAEKGFGKLIG 100
Cdd:pfam13520   2 GLLSAFALVIGSVIGSGIFVAPLV----ASGGPALIVWGWIAAIIFSLAVGLVYAeLSSALPRSGGIYVYLENAFGKFVA 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141  101 FFVAYGYWICNCFALVAYSVLVMATLNYFVPDFTGGNNIPSIIGGSIITWIMYLLALRGAKSTSFLNIIGTIGKLLPVFI 180
Cdd:pfam13520  78 FLAGWSNWFAYVLGLASSASVAASYLLSALGPDLVPTTWLTYGIAIAILIIFAIINIRGVRESAKIQNILGILKLLLPLI 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141  181 FILAVATVFKFSVFMEGFWGMKDGValtldFSNVMPQVSSTMLVTLWLFLGIEGAVVVSGKAKsQAAVRKATTIGFLVTL 260
Cdd:pfam13520 158 LIIILGLVTADGGGFNLLSGEWHTF-----FPDGWPGVFAGFLGVLWSFTGFESAANVSEEVK-KRNVPKAIFIGVIIVG 231
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141  261 ALYIVVSLLPLGVYSQAEVGSMAD-PSMAAIML-KSFGKWGEIMVNAGVIVSVLSSWLVWMLMLGEMPLAASKSGIFP-- 336
Cdd:pfam13520 232 VLYILVNIAFFGVVPDDEIALSSGlGQVAALLFqAVGGKWGAIIVVILLALSLLGAVNTAIVGASRLLYALARDGVLPfs 311
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141  337 KMFVKENKNGSPSTSlLWTTIVVQVVLIISFFIGNNAWTTMISITSVMALPCYFFCTLFLFKIAVKKEYPSGIFASRGMA 416
Cdd:pfam13520 312 RFFAKVNKFGSPIRA-IILTAILSLILLLLFLLSPAAYNALLSLSAYGYLLSYLLPIIGLLILRKKRPDLGRIPGRWPVA 390

                  ..
gi 497295141  417 VF 418
Cdd:pfam13520 391 IF 392
PRK10644 PRK10644
arginine/agmatine antiporter;
13-453 2.37e-25

arginine/agmatine antiporter;


Pssm-ID: 182613 [Multi-domain]  Cd Length: 445  Bit Score: 108.34  E-value: 2.37e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141  13 SAQDSSKKVGLIGLVGIVISAMIGGGIYNLPQNMAAdaSAGAIIIAWVVTGIGIWFIANTFRILSAARPElTNGLYTYAE 92
Cdd:PRK10644   2 SSDADAHKVGLIPVTLMVAGNIMGSGVFLLPANLAS--TGGIAIYGWLVTIIGALGLSMVYAKMSSLDPS-PGGSYAYAR 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141  93 KGFGKLIGFFVAYGYWICNCFALVAYSVLVMATLNYFVPDFTggNNIPSIIGGSIITWIMYLLALRGAKSTSFLNIIGTI 172
Cdd:PRK10644  79 RCFGPFLGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPILK--DPLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATV 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141 173 GKLLPvfIFILAVATVFKFS--VFMEGFwgmkdgvalTLDFSNVMPQVSSTMLVTLWLFLGIEGAVVVSGKAKS-QAAVR 249
Cdd:PRK10644 157 LALIP--IVGIAVFGWFWFRgeTYMAAW---------NVSGLGTFGAIQSTLNVTLWSFIGVESASVAAGVVKNpKRNVP 225
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141 250 KATTIGFLVTLALYIVVSLLPLGVYSQAEVGSMADPSMAAIMLkSFGKWGEIMVNAGVIVSVLSSWLVWMLMLGEMPLAA 329
Cdd:PRK10644 226 IATIGGVLIAAVCYVLSSTAIMGMIPNAALRVSASPFGDAARM-ALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAA 304
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141 330 SKSGIFPKMFVKENKNGSPSTSLLWTTIVVQVVLIISffIGNNA---WTTMISITSVMALPCYFFCTLFLFKIAVKKeyp 406
Cdd:PRK10644 305 ADDGLFPPIFARVNKAGTPVAGLLIVGVLMTIFQLSS--ISPNAskeFGLVSSVSVIFTLVPYLYTCAALLLLGHGH--- 379
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*..
gi 497295141 407 sgIFASRGMAVFTGAAGSLYGLWLIYAAGLNYLMVACIVYAIGLPLY 453
Cdd:PRK10644 380 --FGKARPAYLAVTLIAFVYCIWAVVGSGAKEVMWSFVTLMVITAFY 424
 
Name Accession Description Interval E-value
2A0302 TIGR00905
transporter, basic amino acid/polyamine antiporter (APA) family; This family includes several ...
14-488 5.79e-132

transporter, basic amino acid/polyamine antiporter (APA) family; This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions. [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 129983  Cd Length: 473  Bit Score: 390.96  E-value: 5.79e-132
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141   14 AQDSSKKVGLIGLVGIVISAMIGGGIYNLPQNMAADASAGAIIIAWVVTGIGIWFIANTFRILSAARPELTNGLYTYAEK 93
Cdd:TIGR00905   2 SEAKSKKLGLFALTALVIGSMIGSGIFSLPQNLASVAGPGAVIIGWIITGVGMLALAFVFAILATKKPELDGGIYAYARE 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141   94 GFGKLIGFFVAYGYWICNCFALVAYSVLVMATLNYFVPDFTGGNNIPSIIGGSIITWIMYLLALRGAKSTSFLNIIGTIG 173
Cdd:TIGR00905  82 GFGPYIGFMSGWGYWLSAWIGNVAYAVLLFSALGYFFPLFGSGNPVPSILGASVLLWVFTFLVLRGVRQAAFINTITTIA 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141  174 KLLPVFIFILAVATVFKFSVFMEGFWGmkdgvALTLDFSNVMPQVSSTMLVTLWLFLGIEGAVVVSGKAKSQAAVRKATT 253
Cdd:TIGR00905 162 KLIPLFLFIIIGWFWFKLDLFTADFWG-----HDVPSLGSVFSQVKNTMLVTLWVFIGIEGAVVSSGRAKNKSDVGKATV 236
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141  254 IGFLVTLALYIVVSLLPLGVYSQAEVGSMADPSMAAIMLKSFGKWGEIMVNAGVIVSVLSSWLVWMLMLGEMPLAASKSG 333
Cdd:TIGR00905 237 LGTLGALVIYILITLLSLGVLPQQELANLPNPSMAAVLEMIVGKWGAVLISLGLIISVLGSLLSWTMLAAEVPFSAAKDG 316
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141  334 IFPKMFVKENKNGSPSTSLLWTTIVVQVVLIIsFFIGNNAWTTMISITSVMALPCYFFCTLFLFKIAVKKEYPSgifASR 413
Cdd:TIGR00905 317 LFPKIFGRVNKNGAPSVALLLTNILIQLFLLL-TLLTSSAYNVLVSLAVVMILVPYLLSAAYLLKLAKVGTYPK---IKN 392
                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 497295141  414 GMAVFTGAAGSLYGLWLIYAAGLNYLMVACIVYAIGLPLYIVGVRQHDRQaklFEKRSDKVILAVVLALGIAGLI 488
Cdd:TIGR00905 393 RKALIVGVIACVYSIWLLYAAGLKYLLLGFILYAPGIIFYGRARKERGKH---VFNKKEILIATIIVIAAIIAIW 464
arg_ornith_anti TIGR03810
arginine-ornithine antiporter; Members of this protein family are the arginine/ornithine ...
19-499 1.85e-126

arginine-ornithine antiporter; Members of this protein family are the arginine/ornithine antiporter, ArcD. This exchanger of ornithine for arginine occurs in a system with arginine deiminase, ornithine carbamoyltransferase, and carbamate kinase, with together turn arginine to ornithine with the generation of ATP and release of CO2. [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 163522  Cd Length: 468  Bit Score: 376.70  E-value: 1.85e-126
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141   19 KKVGLIGLVGIVISAMIGGGIYNLPQNMAADASAGAIIIAWVVTGIGIWFIANTFRILSAARPELTNGLYTYAEKGFGKL 98
Cdd:TIGR03810   1 KKLGLGALTALVVGSMIGSGIFSLPSDMAAGAAAGAVLIGWVITGVGMLALAFSFQNLANKKPELDGGVYSYAKAGFGPF 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141   99 IGFFVAYGYWICNCFALVAYSVLVMATLNYFVPDFTGGNNIPSIIGGSIITWIMYLLALRGAKSTSFLNIIGTIGKLLPV 178
Cdd:TIGR03810  81 MGFISAWGYWLSAWLGNVAYATLLFSTLGYFFPIFGGGNNPPSIIGASVLLWCVHFLVLRGVEGAAFINTITTIAKLVPL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141  179 FIFILAVATVFKFSVFMEGFWG-MKDGVAltldFSNVMPQVSSTMLVTLWLFLGIEGAVVVSGKAKSQAAVRKATTIGFL 257
Cdd:TIGR03810 161 FVFIVIGIFAFKGDTFTNDFWGnANGGFS----LGSVMTQVKNMMLVTVWVFIGIEGASMLSARAEKRSDVGKATVIGLI 236
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141  258 VTLALYIVVSLLPLGVYSQAEVGSMADPSMAAIMLKSFGKWGEIMVNAGVIVSVLSSWLVWMLMLGEMPLAASKSGIFPK 337
Cdd:TIGR03810 237 GVLAIYVLVSVLSYGIMTQAQLAGLKNPSMAYVLEHMVGTWGAVLINIGLIISILGAWLSWTLLPAEIPLLMAKDKLMPK 316
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141  338 MFVKENKNGSPSTSLLWTTIVVQVVLIISFFiGNNAWTTMISITSVMALPCYFFCTLFLFKIAVKKEYPSGifasRGMAV 417
Cdd:TIGR03810 317 YFGKENANGAPTNALWLTNGLIQIFLLTTLF-SEQAYNFAISLATSAILVPYLWSAAYQVKLSWRGGQERG----RRKQL 391
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141  418 FTGAAGSLYGLWLIYAAGLNYLMVACIVYAIGLPLYivGVRQHDRQAKLFEKrSDKVILAVVLALGIAGlIYSVITfGNI 497
Cdd:TIGR03810 392 LIGLVALLYAVWLIYAAGLKYLLLSAILYAPGIYFY--ARARKEKGGPVFTK-GELLIFAAIVAGAVIA-IYLLAT-GLI 466

                  ..
gi 497295141  498 HI 499
Cdd:TIGR03810 467 SL 468
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
12-470 2.28e-56

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 193.96  E-value: 2.28e-56
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141  12 SSAQDSSKKVGLIGLVGIVISAMIGGGIYNLPQNMAADAsAGAIIIAWVVTGIGIWFIANTFRILSAARPElTNGLYTYA 91
Cdd:COG0531    4 GESSELKRKLGLFDLVALGVGAIIGAGIFVLPGLAAGLA-GPAAILAWLIAGLLALLVALSYAELASAFPR-AGGAYTYA 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141  92 EKGFGKLIGFFVAYGYWICNCFALVAYSVLVMATLNYFVPDftggnnIPSIIGGSIITWIMYLLALRGAKSTSFLNIIGT 171
Cdd:COG0531   82 RRALGPLLGFLAGWALLLSYVLAVAAVAVAFGGYLSSLFPA------GGSVLIALVLILLLTLLNLRGVKESAKVNNILT 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141 172 IGKLLPVFIFILAVATVFKFSVFMEgFWGMKDGVALTLdfsnvmpqvsSTMLVTLWLFLGIEGAVVVSGKAK-SQAAVRK 250
Cdd:COG0531  156 VLKLLVLLLFIVVGLFAFDPANFTP-FLPAGGGLSGVL----------AALALAFFAFTGFEAIANLAEEAKnPKRNIPR 224
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141 251 ATTIGFLVTLALYIVVSLLPLGVYSQAEVGSMADPsMAAIMLKSFGKWGEIMVNAGVIVSVLSSWLVWMLMLGEMPLAAS 330
Cdd:COG0531  225 AIILSLLIVGVLYILVSLALTGVVPYDELAASGAP-LADAAEAVFGPWGAILIALGALLSLLGALNASILGASRLLYAMA 303
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141 331 KSGIFPKMFVKEN-KNGSPSTSLLWTTIVVQVVLIisffIGNNAWTTMISITSVMALPCYFFCTLFLFKIAVKKEYPSGI 409
Cdd:COG0531  304 RDGLLPKVFAKVHpRFGTPVNAILLTGVIALLLLL----LGAASFTALASLASVGVLLAYLLVALAVIVLRRRRPDLPRP 379
                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 497295141 410 FasRGMAVFTGAAGSLYGLWLIYAAGLNYLMVACIVYAIGLPLYIVGVRQHDRQAKLFEKR 470
Cdd:COG0531  380 F--RVPLPLIPILGILLCLFLLYLLGPGALLIGLVLLAIGLLLYLLYRRRHPKLLKEAEEE 438
AA_permease_2 pfam13520
Amino acid permease;
22-418 1.67e-31

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 125.89  E-value: 1.67e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141   22 GLIGLVGIVISAMIGGGIYNLPQNmaadASAGAIIIAWVVTGIGIWFIANTFRIL-SAARPELTNGLYTYAEKGFGKLIG 100
Cdd:pfam13520   2 GLLSAFALVIGSVIGSGIFVAPLV----ASGGPALIVWGWIAAIIFSLAVGLVYAeLSSALPRSGGIYVYLENAFGKFVA 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141  101 FFVAYGYWICNCFALVAYSVLVMATLNYFVPDFTGGNNIPSIIGGSIITWIMYLLALRGAKSTSFLNIIGTIGKLLPVFI 180
Cdd:pfam13520  78 FLAGWSNWFAYVLGLASSASVAASYLLSALGPDLVPTTWLTYGIAIAILIIFAIINIRGVRESAKIQNILGILKLLLPLI 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141  181 FILAVATVFKFSVFMEGFWGMKDGValtldFSNVMPQVSSTMLVTLWLFLGIEGAVVVSGKAKsQAAVRKATTIGFLVTL 260
Cdd:pfam13520 158 LIIILGLVTADGGGFNLLSGEWHTF-----FPDGWPGVFAGFLGVLWSFTGFESAANVSEEVK-KRNVPKAIFIGVIIVG 231
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141  261 ALYIVVSLLPLGVYSQAEVGSMAD-PSMAAIML-KSFGKWGEIMVNAGVIVSVLSSWLVWMLMLGEMPLAASKSGIFP-- 336
Cdd:pfam13520 232 VLYILVNIAFFGVVPDDEIALSSGlGQVAALLFqAVGGKWGAIIVVILLALSLLGAVNTAIVGASRLLYALARDGVLPfs 311
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141  337 KMFVKENKNGSPSTSlLWTTIVVQVVLIISFFIGNNAWTTMISITSVMALPCYFFCTLFLFKIAVKKEYPSGIFASRGMA 416
Cdd:pfam13520 312 RFFAKVNKFGSPIRA-IILTAILSLILLLLFLLSPAAYNALLSLSAYGYLLSYLLPIIGLLILRKKRPDLGRIPGRWPVA 390

                  ..
gi 497295141  417 VF 418
Cdd:pfam13520 391 IF 392
PRK10644 PRK10644
arginine/agmatine antiporter;
13-453 2.37e-25

arginine/agmatine antiporter;


Pssm-ID: 182613 [Multi-domain]  Cd Length: 445  Bit Score: 108.34  E-value: 2.37e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141  13 SAQDSSKKVGLIGLVGIVISAMIGGGIYNLPQNMAAdaSAGAIIIAWVVTGIGIWFIANTFRILSAARPElTNGLYTYAE 92
Cdd:PRK10644   2 SSDADAHKVGLIPVTLMVAGNIMGSGVFLLPANLAS--TGGIAIYGWLVTIIGALGLSMVYAKMSSLDPS-PGGSYAYAR 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141  93 KGFGKLIGFFVAYGYWICNCFALVAYSVLVMATLNYFVPDFTggNNIPSIIGGSIITWIMYLLALRGAKSTSFLNIIGTI 172
Cdd:PRK10644  79 RCFGPFLGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPILK--DPLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATV 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141 173 GKLLPvfIFILAVATVFKFS--VFMEGFwgmkdgvalTLDFSNVMPQVSSTMLVTLWLFLGIEGAVVVSGKAKS-QAAVR 249
Cdd:PRK10644 157 LALIP--IVGIAVFGWFWFRgeTYMAAW---------NVSGLGTFGAIQSTLNVTLWSFIGVESASVAAGVVKNpKRNVP 225
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141 250 KATTIGFLVTLALYIVVSLLPLGVYSQAEVGSMADPSMAAIMLkSFGKWGEIMVNAGVIVSVLSSWLVWMLMLGEMPLAA 329
Cdd:PRK10644 226 IATIGGVLIAAVCYVLSSTAIMGMIPNAALRVSASPFGDAARM-ALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAA 304
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141 330 SKSGIFPKMFVKENKNGSPSTSLLWTTIVVQVVLIISffIGNNA---WTTMISITSVMALPCYFFCTLFLFKIAVKKeyp 406
Cdd:PRK10644 305 ADDGLFPPIFARVNKAGTPVAGLLIVGVLMTIFQLSS--ISPNAskeFGLVSSVSVIFTLVPYLYTCAALLLLGHGH--- 379
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*..
gi 497295141 407 sgIFASRGMAVFTGAAGSLYGLWLIYAAGLNYLMVACIVYAIGLPLY 453
Cdd:PRK10644 380 --FGKARPAYLAVTLIAFVYCIWAVVGSGAKEVMWSFVTLMVITAFY 424
cadB PRK10435
cadaverine/lysine antiporter;
16-365 9.92e-21

cadaverine/lysine antiporter;


Pssm-ID: 182458  Cd Length: 435  Bit Score: 94.43  E-value: 9.92e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141  16 DSSKKVGLIGLVGIVISAMIGGGIYNLPQNMAadaSAGAI-IIAWVVTGIGIWFIANTFRILSAARPElTNGLYTYAEK- 93
Cdd:PRK10435   2 SSAKKIGLFACTGVVAGNMMGSGIALLPANLA---SIGSIaIWGWIISIIGAMSLAYVYARLATKNPQ-QGGPIAYAGEi 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141  94 --GFGKLIGFFVAYGYWICN---CFALVAYSVLVMATLNYFVPdftggnnipSIIGGSIITWIMYLLALRGAKSTSFLNI 168
Cdd:PRK10435  78 spAFGFQTGVLYYHANWIGNlaiGITAVSYLSTFFPVLNDPIP---------AGIACIAIVWVFTFVNMLGGTWVSRLTT 148
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141 169 IGTIGKLLPVFIFILAVATVFKFSVFMEGfWGMKDGvaltldfsNVMPQVSSTMLVTLWLFLGIEGAVVVSGKAKS-QAA 247
Cdd:PRK10435 149 IGLVLVLIPVVGTAIVGWHWFDAATYAAN-WNTSDT--------TDGHAIIKSILLCLWAFVGVESAAVSTGMVKNpKRT 219
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141 248 VRKATTIGFLVTLALYIVVSLLPLGVYSQAEVGSMADP-SMAAIMLksFGKWGEIMVNAGVIVSVLSSWLVWMLMLGEMP 326
Cdd:PRK10435 220 VPLATMLGTGLAGIIYIAATQVISGMFPASVMAASGAPfAISASTI--LGNWAAPLVSAFTAFACLTSLGSWMMLVGQAG 297
                        330       340       350
                 ....*....|....*....|....*....|....*....
gi 497295141 327 LAASKSGIFPKMFVKENKNGSPSTSLLWTTIVVQVVLII 365
Cdd:PRK10435 298 VRAANDGNFPKVYGEVDKNGIPKKGLLLAAVKMTALMIL 336
potE PRK10655
putrescine transporter; Provisional
16-465 5.31e-16

putrescine transporter; Provisional


Pssm-ID: 182622  Cd Length: 438  Bit Score: 80.07  E-value: 5.31e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141  16 DSSKKVGLIGLVGIVISAMIGGGIYNLPQNMaadASAGAI-IIAWVVTGIGIWFIANTFrilsaARPELTN----GLYTY 90
Cdd:PRK10655   3 AKSNKMGVVQLTILTAVNMMGSGIIMLPTKL---AQVGTIsILSWLVTAVGSMALAYAF-----AKCGMFSrksgGMGGY 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141  91 AEKGFGKLIGFFVAYGYWICNCFALVAYSVLVMATLNYFVPdfTGGNNIPSIIGGSIITWIMYLLALRGAKSTSFLNIIG 170
Cdd:PRK10655  75 AEYAFGKSGNFMANYTYGVSLLIANVAIAISAVGYGTELFG--ATLSPVQICLATIGVLWLCTVANFGGARITGQISSVT 152
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141 171 TIGKLLPVFIFILAVATVFKFSVFMEGfWGMKDgvaltLDFSNVMpqvSSTMLVTLWLFLGIEGAVvvsgkAKSQAA--- 247
Cdd:PRK10655 153 VWGVIIPVVGLSIIGWFWFSPSLYVAA-WNPHH-----LPFFSAV---GSSIAMTLWAFLGLESAC-----ANSDAVenp 218
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141 248 ---VRKATTIGFLVTLALYIVVSLLPLGVYSQAEVG-SMADPSMA-AIMlksFGKWGEIMVNAGVIVSVLSSWLVWMLML 322
Cdd:PRK10655 219 ernVPIAVLGGTLGAAVIYIVSTNVIAGIVPNMELAnSTAPFGLAfAQM---FNPTVGKIVMALMVMSCCGSLLGWQFTI 295
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141 323 GEMPLAASKSGIFPKMFVKENKNGSPSTSLLwtTIVVQVVLIISFFIG---NNAWTTMISITSVMALPCYFFCTLFLFKI 399
Cdd:PRK10655 296 AQVFKSSADEGYFPKIFSRVTKVDAPVQGML--IIVVIQSLLSLMTISpslNSQFNVLVNLAVVTNIIPYILSMAALVII 373
                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 497295141 400 AVKKEYPSGIFAsrgMAVFTGAAGSLYGLWLIYAAGLNYLMVACIVYAIGLPLYIVGVRQHDRQAK 465
Cdd:PRK10655 374 QKVANVPPSKAK---VANFIAFVGALYSFYALYSSGEEAMLYGSIVTFLGWTLYGLISPRFELKNK 436
AA_permease pfam00324
Amino acid permease;
25-389 2.85e-08

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 56.17  E-value: 2.85e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141   25 GLVGIVISAMIGGGIYNLPQNMAADASAGAIIIAWVVTGIGIWFIANTFRILSAARPeLTNGLYTYAEKGFGKLIGFFVA 104
Cdd:pfam00324   1 HVQMIALGGVIGTGLFVGSGSVLGQAGPAGALLGYLISGVVIFLVMLSLGEISTNGP-VSGGFYTYASRFLGPSLGFATG 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141  105 YGYWICNCFALVAYSVLVMATLNYFVpdfTGGNNIPSIIGGSIITWIMYLLALRGAKSTSFLNIIGTIGKLLPVFIFILA 184
Cdd:pfam00324  80 WNYWLSWITVLALELTAASILIQFWE---LVPDIPYLWVWGAVFLVLLTIINLVGVKWYGEAEFWFALIKIIAIIGFIIV 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141  185 VATVF-----KFSVFMEGFWGMKDGVALTLDFSNVmpqVSSTMLVTLWLFLGIEGAVVVSGKAKSQA-AVRKAT-----T 253
Cdd:pfam00324 157 GIILLsggnpNDGAIFRYLGDNGGKNNFPPGFGKG---FISVFVIAFFAFTGIELVGIAAGEVKNPEkSIPKAIlqviwR 233
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141  254 IGFLVTLALYIVVSLLPLGVYSQAEVGSMADPSMAAIMLKSFGKWGEIMVNAGVIVSVLSSWLVWMLMLGEMPLAASKSG 333
Cdd:pfam00324 234 ITIFYILSLLAIGLLVPWNDPGLLNDSASAASPFVIFFKFLGISGLAPLINAVILTAALSAANSSLYSGSRMLYSLARDG 313
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 497295141  334 IFPKMFVKENKNGSPSTSLLWTTIVVQVVLIISFFIGNNAWTTMISITSVMALPCY 389
Cdd:pfam00324 314 LAPKFLKKVDKRGVPLRAILVSMVISLLALLLASLNPAIVFNFLLAISGLSGLIVW 369
AnsP COG1113
L-asparagine transporter or related permease [Amino acid transport and metabolism];
50-386 2.92e-06

L-asparagine transporter or related permease [Amino acid transport and metabolism];


Pssm-ID: 440730 [Multi-domain]  Cd Length: 458  Bit Score: 49.73  E-value: 2.92e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141  50 ASAG-AIIIAWVVTGIGIWFIANTFRILSAARPElTNGLYTYAEKGFGKLIGFFVAYGYWICNCFALVAYSVLVMATLNY 128
Cdd:COG1113   44 ALAGpAVLLSYLIAGLIVFLVMRALGEMAVANPV-SGSFSDYAREYLGPWAGFVTGWLYWFFWVLVGMAEATAVGIYLQF 122
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141 129 FVPDFTggnnipsiiggsiiTWIMYLLALrgakstSFLNIIGTIG--------------KLLPVFIFILaVATVFKFSVF 194
Cdd:COG1113  123 WFPDVP--------------QWVWALVFL------VLLTAINLLSvklfgefefwfaliKVVAIVAFIV-VGLLLIFFGF 181
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141 195 MEGfWGMKDGVALTLDFSNVMPQ----VSSTMLVTLWLFLGIEGAVVVSGKAKS-QAAVRKATT-----IGFLVTLALYI 264
Cdd:COG1113  182 GLP-GGPPAGLSNLWDHGGFFPNgiggVLAALQIVVFAFGGIELVGIAAAEAKDpEKTIPKAINsviwrILLFYVGSLFV 260
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141 265 VVSLLPLGVYSQAE-----VGSMAD-PSMAAIMlksfgkwgeimvNAGVIVSVLSSWLVWMLMLGEMPLAASKSGIFPKM 338
Cdd:COG1113  261 ILALVPWNQIGAGGspfvtVFSLLGiPAAAGIM------------NFVVLTAALSSLNSGLYSTSRMLYSLAERGDAPKF 328
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*...
gi 497295141 339 FVKENKNGSPSTSLLWTTIVVQVVLIISFFIGNNAWTTMISITSVMAL 386
Cdd:COG1113  329 FGKLSKRGVPVRAILLSAVVLLIGVVLNYLLPEKAFTFLLSISGFGAL 376
PRK10197 PRK10197
GABA permease;
31-390 2.08e-05

GABA permease;


Pssm-ID: 182297  Cd Length: 446  Bit Score: 46.92  E-value: 2.08e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141  31 ISAMIGGGIYnLPQNMAADASAGAIIIAWVVTGIGIWFIANTFRILSAARPElTNGLYTYAEKGFGKLIGFFVAYGYWIC 110
Cdd:PRK10197   4 IAGVIGASLF-VGSSVAIAEAGPAVLLAYLFAGLLVVMIMRMLAEMAVATPD-TGSFSTYADKAIGRWAGYTIGWLYWWF 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141 111 NCFALVAYSVLVMATLNYFVPDFTggnnipsiiggsiiTWIMYL---LALRGAKSTSFLNiIGTIGKLLPVFIFILAVAT 187
Cdd:PRK10197  82 WVLVIPLEANIAAMILHSWVPGIP--------------IWLFSLvitLALTGSNLLSVKN-YGEFEFWLALCKVIAILAF 146
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141 188 VFKFSVFMEGFWGMKD--GVALTLDFSNVMPQ----VSSTMLVTLWLFLGIEGAVVVSGKAKS--QAAVRKATTIGFLVT 259
Cdd:PRK10197 147 IFLGAVAISGFYPYAEvsGISRLWDSGGFMPNgfgaVLSAMLITMFSFMGAEIVTIAAAESDTpeKHIVRATNSVIWRIS 226
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141 260 L----ALYIVVSLLPLGVYSQAEVGSMAdpSMAAIMLKSFGKwgeIMVNAGVIVSVLSSWLVWMLMLGEMPLAASKSGIF 335
Cdd:PRK10197 227 IfylcSIFVVVALIPWNMPGLKAVGSYR--SVLELLNIPHAK---LIMDCVILLSVTSCLNSALYTASRMLYSLSRRGDA 301
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 497295141 336 PKMFVKENKNGSPSTSLLWTTIVVQVVLIISFFIGNNAWTTMISITSVMALPCYF 390
Cdd:PRK10197 302 PAVMGKINRSKTPYVAVLLSTGAAFLTVVVNYYAPAKVFKFLIDSSGAIALLVYL 356
2A0308 TIGR00911
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
1-101 6.28e-04

L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273332 [Multi-domain]  Cd Length: 501  Bit Score: 42.43  E-value: 6.28e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141    1 MADKTASGSGGSSAQdssKKVGLIGLVGIVISAMIGGGIYNLPQNMAADA-SAGAIIIAWVVTGIGIWFIANTFRILSAA 79
Cdd:TIGR00911  27 VSASTVDGGEAVALK---KEITLLSGVGIIVGTIIGSGIFVSPKGVLKNAgSVGLALIMWAVCGIFSIVGALVYAELGTT 103
                          90       100
                  ....*....|....*....|..
gi 497295141   80 RPElTNGLYTYAEKGFGKLIGF 101
Cdd:TIGR00911 104 IPK-SGGEYNYILEVFGPLLAF 124
LysP COG0833
Amino acid permease [Amino acid transport and metabolism];
48-381 2.72e-03

Amino acid permease [Amino acid transport and metabolism];


Pssm-ID: 440595 [Multi-domain]  Cd Length: 467  Bit Score: 40.15  E-value: 2.72e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141  48 ADASAGAIIIAWVVTGIGIWFIANTFRILSAARPElTNGLYTYAEKGFGKLIGFFVAYGYWICNCFALVAYSVLVMATLN 127
Cdd:COG0833   41 SQAGPGGALLAYLLGGLMVYFLMTSLGELAVAMPV-SGSFQTYATRFIDPAFGFAVGWNYWLNWAITVAAELTAAGIIMQ 119
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141 128 YFVPDFTGgnnIPSIIGGSIITWIMYLLALRG-AKSTSFLNIIgtigKLLPVFIFI-LAVATVFKF---SVFMEGFWGMK 202
Cdd:COG0833  120 YWFPDVPV---WIWSLLFLALIFLLNALSVKAfGESEFWFSLI----KVITVIAFIiVGLLMIFGIiggHAPGFSNFTTG 192
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141 203 DGValtldFSNVMPQVSSTMLVTLWLFLGIEGAVVVSGKAKS-QAAVRKATTIGFLVTLALYI-----VVSLLPlgvYSQ 276
Cdd:COG0833  193 DGP-----FPGGFLAILGVMMIVGFSFQGTELIGIAAGESENpEKTIPKAIRQVFWRILLFYIlaifvIAALIP---YTD 264
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141 277 AEVGSmadpSMAAIMLKSFG-KWGEIMVNAGVIVSVLSSWLVWMLMLGEMPLAASKSGIFPKMFVKENKNGSPSTSLLWT 355
Cdd:COG0833  265 AGVAE----SPFTLVFERAGiPYAADIMNAVILTAVLSAGNSGLYASTRMLWSLAKEGMAPKIFAKLNKRGVPLNALLAT 340
                        330       340
                 ....*....|....*....|....*.
gi 497295141 356 TIVVQVVLIISFFIGNNAWTTMISIT 381
Cdd:COG0833  341 MAVGLLALLSSFFGAGTVYLWLLSIS 366
Spore_permease pfam03845
Spore germination protein;
29-279 6.68e-03

Spore germination protein;


Pssm-ID: 281794  Cd Length: 321  Bit Score: 38.77  E-value: 6.68e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141   29 IVISAMIGGGIYNLPQNMAADASAGAIIiAWVVTGIGIWFIANTFRILSAARPELTngLYTYAEKGFGKLIG-----FFV 103
Cdd:pfam03845  10 LIVSFQLGSGILTLPRSVAEQAGPDGWI-SVLLAGIIGLILVYLYYYLLKKFPEKT--LIEYMKKILGKWLGsllsiLFM 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141  104 AYGYWICnCFALVAYSVLVMATLNYFVPDFTggnnipsiiGGSIITWIMYLLALRGAKSTSFLNIIGTIGKLLPVFIFIL 183
Cdd:pfam03845  87 LYFLYIA-GRVLRIFSEVIQFFLLPDTPTWI---------IILTLLLVSLYLISKGIEVLAREFCFIIPILLIILLLILL 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 497295141  184 AVATVFKFsVFMEGFWGmkdgvaltldfSNVMPQVSSTMLVTLWlFLGIEGAVVVSGKAKSQAAVRKATTIGFLVTLALY 263
Cdd:pfam03845 157 FSLKIAHI-DNLRPVLG-----------NGISPVLKGLKVTSLP-FGGFEILLMLYPFMKDKKKSKKAALLGVGISGLLY 223
                         250
                  ....*....|....*.
gi 497295141  264 IVVSLLPLGVYSQAEV 279
Cdd:pfam03845 224 TLTTIIVIGVLGVEQT 239
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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