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Conserved domains on  [gi|495249090|ref|WP_007973849|]
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MULTISPECIES: malate dehydrogenase (quinone) [unclassified Pseudomonas]

Protein Classification

malate:quinone oxidoreductase( domain architecture ID 10014206)

malate:quinone oxidoreductase catalyzes the oxidation of malate to oxaloacetate using quinone as the electron acceptor as part of the citric acid cycle

Graphical summary

 Zoom to residue level

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List of domain hits

Name Accession Description Interval E-value
PRK13339 PRK13339
malate:quinone oxidoreductase; Reviewed
1-496 0e+00

malate:quinone oxidoreductase; Reviewed


:

Pssm-ID: 183983  Cd Length: 497  Bit Score: 1021.55  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090   1 MAHNEAVDVVLVGAGIMSATLAVLLKELDPAIKLEVVELMDSGAAESSNPWNNAGTGHAGLCELNYTPQAADGAVDIKKA 80
Cdd:PRK13339   1 MAKSESKDVVLVGAGILSTTFGVLLKELDPDWNIEVVERLDSPAIESSNEWNNAGTGHAALCELNYTVQQPDGSIDIEKA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090  81 VHINTQFEVSKQFWSYLTKKGTFGSCKSFISPVPHLSFVQGDSGVSFLKERFKVLSKHHAFADMEYTEDKATMAEWMPLM 160
Cdd:PRK13339  81 KEINEQFEISKQFWGHLVKSGTIGNPREFINPLPHISFVRGKNNVKFLKKRYEALKQHPMFDNIEYTEDIEVMAKWMPLM 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090 161 MPGRDPGETLAATRVINGTDVNFGALTNQLLKHLTSAPDAQVKYCKRVTGLKRN-NGGWTVSIKDVNSGNTREVDAKFVF 239
Cdd:PRK13339 161 MPGREANEIMAASKIDEGTDVNFGALTRKLAKHLESHPNAQVKYNHEVVDLERLsDGGWEVTVKDRNTGEKREQVADYVF 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090 240 LGAGGAALPLLQASGIEESKGFGGFPISGQWLRCDNPEVVKHHQAKVYSQAAVGSPPMSVPHLDTRVVDGKKSLLFGPYA 319
Cdd:PRK13339 241 IGAGGGAIPLLQKSGIPESKHLGGFPISGQFLRCTNPEVVKQHQAKVYSKEPVGTPPMTVPHLDTRYIDGKRSLLFGPYA 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090 320 GFTTKFLKHGSFMDLPLSVRAGNIGPMLAVAKNNMDLTKYLVSEVMQSMEQRLESLRRFYPEAKAEDWRLEVAGQRVQII 399
Cdd:PRK13339 321 GFGPKFLKHGSNLDLFKSVKPYNITTMLAVAVKNMPLIKYSIDQVMQTKEGRMNHLRTFYPEARAEDWRLYTAGKRVQVI 400
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090 400 KKDPKKG-GILQFGTELVAAKDGSLAALLGASPGASVTVSIMLELIEKCFPSKAKgEWAGKLAEIFPAREKVLETDAALY 478
Cdd:PRK13339 401 KDTPEHGkGFIQFGTEVVNSQDHSVIALLGESPGASTSVSVALEVLERNFPEYAK-EWAPKLKEMIPSYGKSLIEDAKLM 479
                        490
                 ....*....|....*...
gi 495249090 479 RKINTQNNVALELVEASS 496
Cdd:PRK13339 480 RKIRKQTSKDLELGYYEN 497
 
Name Accession Description Interval E-value
PRK13339 PRK13339
malate:quinone oxidoreductase; Reviewed
1-496 0e+00

malate:quinone oxidoreductase; Reviewed


Pssm-ID: 183983  Cd Length: 497  Bit Score: 1021.55  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090   1 MAHNEAVDVVLVGAGIMSATLAVLLKELDPAIKLEVVELMDSGAAESSNPWNNAGTGHAGLCELNYTPQAADGAVDIKKA 80
Cdd:PRK13339   1 MAKSESKDVVLVGAGILSTTFGVLLKELDPDWNIEVVERLDSPAIESSNEWNNAGTGHAALCELNYTVQQPDGSIDIEKA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090  81 VHINTQFEVSKQFWSYLTKKGTFGSCKSFISPVPHLSFVQGDSGVSFLKERFKVLSKHHAFADMEYTEDKATMAEWMPLM 160
Cdd:PRK13339  81 KEINEQFEISKQFWGHLVKSGTIGNPREFINPLPHISFVRGKNNVKFLKKRYEALKQHPMFDNIEYTEDIEVMAKWMPLM 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090 161 MPGRDPGETLAATRVINGTDVNFGALTNQLLKHLTSAPDAQVKYCKRVTGLKRN-NGGWTVSIKDVNSGNTREVDAKFVF 239
Cdd:PRK13339 161 MPGREANEIMAASKIDEGTDVNFGALTRKLAKHLESHPNAQVKYNHEVVDLERLsDGGWEVTVKDRNTGEKREQVADYVF 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090 240 LGAGGAALPLLQASGIEESKGFGGFPISGQWLRCDNPEVVKHHQAKVYSQAAVGSPPMSVPHLDTRVVDGKKSLLFGPYA 319
Cdd:PRK13339 241 IGAGGGAIPLLQKSGIPESKHLGGFPISGQFLRCTNPEVVKQHQAKVYSKEPVGTPPMTVPHLDTRYIDGKRSLLFGPYA 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090 320 GFTTKFLKHGSFMDLPLSVRAGNIGPMLAVAKNNMDLTKYLVSEVMQSMEQRLESLRRFYPEAKAEDWRLEVAGQRVQII 399
Cdd:PRK13339 321 GFGPKFLKHGSNLDLFKSVKPYNITTMLAVAVKNMPLIKYSIDQVMQTKEGRMNHLRTFYPEARAEDWRLYTAGKRVQVI 400
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090 400 KKDPKKG-GILQFGTELVAAKDGSLAALLGASPGASVTVSIMLELIEKCFPSKAKgEWAGKLAEIFPAREKVLETDAALY 478
Cdd:PRK13339 401 KDTPEHGkGFIQFGTEVVNSQDHSVIALLGESPGASTSVSVALEVLERNFPEYAK-EWAPKLKEMIPSYGKSLIEDAKLM 479
                        490
                 ....*....|....*...
gi 495249090 479 RKINTQNNVALELVEASS 496
Cdd:PRK13339 480 RKIRKQTSKDLELGYYEN 497
Mqo pfam06039
Malate:quinone oxidoreductase (Mqo); This family consists of several bacterial Malate:quinone ...
7-491 0e+00

Malate:quinone oxidoreductase (Mqo); This family consists of several bacterial Malate:quinone oxidoreductase (Mqo) proteins (EC:1.1.99.16). Mqo takes part in the citric acid cycle. It oxidizes L-malate to oxaloacetate and donates electrons to ubiquinone-1 and other artificial acceptors or, via the electron transfer chain, to oxygen. NAD is not an acceptor and the natural direct acceptor for the enzyme is most likely a quinone. The enzyme is therefore called malate:quinone oxidoreductase, abbreviated to Mqo. Mqo is a peripheral membrane protein and can be released from the membrane by addition of chelators.


Pssm-ID: 461809  Cd Length: 488  Bit Score: 930.31  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090    7 VDVVLVGAGIMSATLAVLLKELDPAIKLEVVELMDSGAAESSNPWNNAGTGHAGLCELNYTPQAADGAVDIKKAVHINTQ 86
Cdd:pfam06039   2 VDVVLIGAGIMSATLGTLLKELEPDWSITVFERLDAVAAESSNAWNNAGTGHSALCELNYTPEKPDGSIDISKAVKINEQ 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090   87 FEVSKQFWSYLTKKGTFGSCKSFISPVPHLSFVQGDSGVSFLKERFKVLSKHHAFADMEYTEDKATMAEWMPLMMPGRDP 166
Cdd:pfam06039  82 FEVSRQFWAYLVENGVLPDPKSFINPVPHMSFVWGEDNVAFLRKRYEALSAHPLFEGMEFSEDPAQIAEWAPLMMEGRDP 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090  167 GETLAATRVINGTDVNFGALTNQLLKHLTSAPDAQVKYCKRVTGLKRN-NGGWTVSIKDVNSGNTREVDAKFVFLGAGGA 245
Cdd:pfam06039 162 SEPVAATRIELGTDVNFGALTRQLVAYLQKQPGVELHYGHEVTDLKRNsDGRWRVKVKDLNTGEKRTVRAKFVFIGAGGG 241
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090  246 ALPLLQASGIEESKGFGGFPISGQWLRCDNPEVVKHHQAKVYSQAAVGSPPMSVPHLDTRVVDGKKSLLFGPYAGFTTKF 325
Cdd:pfam06039 242 ALPLLQKSGIPEAKGYGGFPVSGQFLRCTNPEVIAQHHAKVYGKAAVGAPPMSVPHLDTRVIDGKKSLLFGPFAGFSTKF 321
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090  326 LKHGSFMDLPLSVRAGNIGPMLAVAKNNMDLTKYLVSEVMQSMEQRLESLRRFYPEAKAEDWRLEVAGQRVQIIKKDPKK 405
Cdd:pfam06039 322 LKNGSLLDLFKSIRPSNILPMLAVGLDNLDLTKYLIGQVLQSHEDRMEALREFFPEAKDEDWELITAGQRVQVIKKDEEK 401
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090  406 GGILQFGTELVAAKDGSLAALLGASPGASVTVSIMLELIEKCFPSK-AKGEWAGKLAEIFPAREKVLETDAALYRKINTQ 484
Cdd:pfam06039 402 GGVLQFGTEVVASADGSIAALLGASPGASTAVSIMLEVLERCFPERmASPEWQPKLKEMIPSYGQKLNDDPELLAEIRAR 481

                  ....*..
gi 495249090  485 NNVALEL 491
Cdd:pfam06039 482 TSKVLGL 488
mal_quin_oxido TIGR01320
malate:quinone-oxidoreductase; This membrane-associated enzyme is an alternative to the ...
7-481 0e+00

malate:quinone-oxidoreductase; This membrane-associated enzyme is an alternative to the better-known NAD-dependent malate dehydrogenase as part of the TCA cycle. The reduction of a quinone rather than NAD+ makes the reaction essentially irreversible in the direction of malate oxidation to oxaloacetate. Both forms of malate dehydrogenase are active in E. coli; disruption of this form causes less phenotypic change. In some bacteria, this form is the only or the more important malate dehydrogenase. [Energy metabolism, TCA cycle]


Pssm-ID: 130387  Cd Length: 483  Bit Score: 779.01  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090    7 VDVVLVGAGIMSATLAVLLKELDPAIKLEVVELMDSGAAESSNPWNNAGTGHAGLCELNYTPQAADGAVDIKKAVHINTQ 86
Cdd:TIGR01320   1 TDVVLIGAGIMSATLGVLLRELEPNWSITLIERLDAVAAESSNPWNNAGTGHSALCELNYTPEMADGSIDIAKAVGINEQ 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090   87 FEVSKQFWSYLTKKGTFGSCKSFISPVPHLSFVQGDSGVSFLKERFKVLSKHHAFADMEYTEDKATMAEWMPLMMPGRDP 166
Cdd:TIGR01320  81 FQVSRQFWAHLVEEGILTDPKSFINPVPHVSFVHGSDGVAYLKKRYEALKGHPLFEGMEFSEDPATFAEWLPLMAAGRDF 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090  167 GETLAATRVINGTDVNFGALTNQLLKHLtSAPDAQVKYCKRVTGLKRN-NGGWTVSIKDVNSGNTREVDAKFVFLGAGGA 245
Cdd:TIGR01320 161 SEPVAANWAAEGTDVDFGALTKQLLGYL-VQNGTTIRFGHEVRNLKRQsDGSWTVTVKNTRTGGKRTLNTRFVFVGAGGG 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090  246 ALPLLQASGIEESKGFGGFPISGQWLRCDNPEVVKHHQAKVYSQAAVGSPPMSVPHLDTRVVDGKKSLLFGPYAGFTTKF 325
Cdd:TIGR01320 240 ALPLLQKSGIPEVKGFAGFPVSGLFLRCGNPELTEQHRAKVYGQASVGAPPMSVPHLDTRVVDGKKWLLFGPYAGWSPKF 319
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090  326 LKHGSFMDLPLSVRAGNIGPMLAVAKNNMDLTKYLVSEVMQSMEQRLESLRRFYPEAKAEDWRLEVAGQRVQIIKKDPKK 405
Cdd:TIGR01320 320 LKHGSILDLPLSIRPDNLLSMLGVGLTEMDLTKYLIGQLRKSEEERVSALREFYPEAIDSDWELIVAGQRVQVIKKDPEK 399
                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 495249090  406 G-GILQFGTELVAAKDGSLAALLGASPGASVTVSIMLELIEKCFPSKAKgEWAGKLAEIFPAREKVLETDAALYRKI 481
Cdd:TIGR01320 400 GgGVLEFGTTLIADADGSIAGLLGASPGASTAVSIMLDLLERCFPERYQ-SWLPKLKEMVPSYGKKLSSEPALFDEV 475
LhgO COG0579
L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism];
3-481 3.13e-138

L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism];


Pssm-ID: 440344 [Multi-domain]  Cd Length: 418  Bit Score: 404.91  E-value: 3.13e-138
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090   3 HNEAVDVVLVGAGIMSATLAVLLKELDpAIKLEVVELMDSGAAESSNpwNNAGTGHAGLcelNYTPqaadGAVDIKKAVH 82
Cdd:COG0579    1 MMEMYDVVIIGAGIVGLALARELSRYE-DLKVLVLEKEDDVAQESSG--NNSGVIHAGL---YYTP----GSLKARLCVE 70
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090  83 INTQF-EVSKQFwsYLTKKgtfgscksfisPVPHLSFVQGDSGVSFLKERFKVLSKHHaFADMEYTeDKATMAEWMPLMM 161
Cdd:COG0579   71 GNELFyELCREL--GIPFK-----------RCGKLVVATGEEEVAFLEKLYERGKANG-VPGLEIL-DREELRELEPLLS 135
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090 162 PgrdpgETLAATRVINGTDVNFGALTNQLLKHLTsAPDAQVKYCKRVTGLKRNNGGWTVSIkdvnsgNTREVDAKFVFLG 241
Cdd:COG0579  136 D-----EGVAALYSPSTGIVDPGALTRALAENAE-ANGVELLLNTEVTGIEREGDGWEVTT------NGGTIRARFVINA 203
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090 242 AGGAALPLLQASGIeeSKGFGGFPISGQWLRCDNP-EVVKHhqaKVYSQAAVGSPPMSVpHLdTRVVDGkkSLLFGPYAG 320
Cdd:COG0579  204 AGLYADRLAQMAGI--GKDFGIFPVKGEYLVLDKPaELVNA---KVYPVPDPGAPFLGV-HL-TRTIDG--NLLFGPNAV 274
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090 321 FTTKflKHGSFMDLPLSVRAGNIGPMLAvakNNMdLTKYLVSEVMQSMEQRLESLRRFYPEAKAEDWRLEVAGQRVQIIK 400
Cdd:COG0579  275 FVPK--KEDSLLDLFESLRFPNFWPMLA---KNL-LTKYLESVTSLSKEAFLEALRKYVPELPDEDLIPAFAGIRAQIIK 348
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090 401 KDpkkggilqfGTELVAAKD--GSLAALLGASPGASVTVSIMLELIEKCFPSKAKGEWAGKLAEIfpaREKVLETDAAlY 478
Cdd:COG0579  349 PD---------GDFVIEEADdpGSIHVLGIESPGATSALAIAEHVAELLPEKLEEKDWQPKRKMI---SFGELKEDPA-Y 415

                 ...
gi 495249090 479 RKI 481
Cdd:COG0579  416 GEI 418
 
Name Accession Description Interval E-value
PRK13339 PRK13339
malate:quinone oxidoreductase; Reviewed
1-496 0e+00

malate:quinone oxidoreductase; Reviewed


Pssm-ID: 183983  Cd Length: 497  Bit Score: 1021.55  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090   1 MAHNEAVDVVLVGAGIMSATLAVLLKELDPAIKLEVVELMDSGAAESSNPWNNAGTGHAGLCELNYTPQAADGAVDIKKA 80
Cdd:PRK13339   1 MAKSESKDVVLVGAGILSTTFGVLLKELDPDWNIEVVERLDSPAIESSNEWNNAGTGHAALCELNYTVQQPDGSIDIEKA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090  81 VHINTQFEVSKQFWSYLTKKGTFGSCKSFISPVPHLSFVQGDSGVSFLKERFKVLSKHHAFADMEYTEDKATMAEWMPLM 160
Cdd:PRK13339  81 KEINEQFEISKQFWGHLVKSGTIGNPREFINPLPHISFVRGKNNVKFLKKRYEALKQHPMFDNIEYTEDIEVMAKWMPLM 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090 161 MPGRDPGETLAATRVINGTDVNFGALTNQLLKHLTSAPDAQVKYCKRVTGLKRN-NGGWTVSIKDVNSGNTREVDAKFVF 239
Cdd:PRK13339 161 MPGREANEIMAASKIDEGTDVNFGALTRKLAKHLESHPNAQVKYNHEVVDLERLsDGGWEVTVKDRNTGEKREQVADYVF 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090 240 LGAGGAALPLLQASGIEESKGFGGFPISGQWLRCDNPEVVKHHQAKVYSQAAVGSPPMSVPHLDTRVVDGKKSLLFGPYA 319
Cdd:PRK13339 241 IGAGGGAIPLLQKSGIPESKHLGGFPISGQFLRCTNPEVVKQHQAKVYSKEPVGTPPMTVPHLDTRYIDGKRSLLFGPYA 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090 320 GFTTKFLKHGSFMDLPLSVRAGNIGPMLAVAKNNMDLTKYLVSEVMQSMEQRLESLRRFYPEAKAEDWRLEVAGQRVQII 399
Cdd:PRK13339 321 GFGPKFLKHGSNLDLFKSVKPYNITTMLAVAVKNMPLIKYSIDQVMQTKEGRMNHLRTFYPEARAEDWRLYTAGKRVQVI 400
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090 400 KKDPKKG-GILQFGTELVAAKDGSLAALLGASPGASVTVSIMLELIEKCFPSKAKgEWAGKLAEIFPAREKVLETDAALY 478
Cdd:PRK13339 401 KDTPEHGkGFIQFGTEVVNSQDHSVIALLGESPGASTSVSVALEVLERNFPEYAK-EWAPKLKEMIPSYGKSLIEDAKLM 479
                        490
                 ....*....|....*...
gi 495249090 479 RKINTQNNVALELVEASS 496
Cdd:PRK13339 480 RKIRKQTSKDLELGYYEN 497
Mqo pfam06039
Malate:quinone oxidoreductase (Mqo); This family consists of several bacterial Malate:quinone ...
7-491 0e+00

Malate:quinone oxidoreductase (Mqo); This family consists of several bacterial Malate:quinone oxidoreductase (Mqo) proteins (EC:1.1.99.16). Mqo takes part in the citric acid cycle. It oxidizes L-malate to oxaloacetate and donates electrons to ubiquinone-1 and other artificial acceptors or, via the electron transfer chain, to oxygen. NAD is not an acceptor and the natural direct acceptor for the enzyme is most likely a quinone. The enzyme is therefore called malate:quinone oxidoreductase, abbreviated to Mqo. Mqo is a peripheral membrane protein and can be released from the membrane by addition of chelators.


Pssm-ID: 461809  Cd Length: 488  Bit Score: 930.31  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090    7 VDVVLVGAGIMSATLAVLLKELDPAIKLEVVELMDSGAAESSNPWNNAGTGHAGLCELNYTPQAADGAVDIKKAVHINTQ 86
Cdd:pfam06039   2 VDVVLIGAGIMSATLGTLLKELEPDWSITVFERLDAVAAESSNAWNNAGTGHSALCELNYTPEKPDGSIDISKAVKINEQ 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090   87 FEVSKQFWSYLTKKGTFGSCKSFISPVPHLSFVQGDSGVSFLKERFKVLSKHHAFADMEYTEDKATMAEWMPLMMPGRDP 166
Cdd:pfam06039  82 FEVSRQFWAYLVENGVLPDPKSFINPVPHMSFVWGEDNVAFLRKRYEALSAHPLFEGMEFSEDPAQIAEWAPLMMEGRDP 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090  167 GETLAATRVINGTDVNFGALTNQLLKHLTSAPDAQVKYCKRVTGLKRN-NGGWTVSIKDVNSGNTREVDAKFVFLGAGGA 245
Cdd:pfam06039 162 SEPVAATRIELGTDVNFGALTRQLVAYLQKQPGVELHYGHEVTDLKRNsDGRWRVKVKDLNTGEKRTVRAKFVFIGAGGG 241
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090  246 ALPLLQASGIEESKGFGGFPISGQWLRCDNPEVVKHHQAKVYSQAAVGSPPMSVPHLDTRVVDGKKSLLFGPYAGFTTKF 325
Cdd:pfam06039 242 ALPLLQKSGIPEAKGYGGFPVSGQFLRCTNPEVIAQHHAKVYGKAAVGAPPMSVPHLDTRVIDGKKSLLFGPFAGFSTKF 321
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090  326 LKHGSFMDLPLSVRAGNIGPMLAVAKNNMDLTKYLVSEVMQSMEQRLESLRRFYPEAKAEDWRLEVAGQRVQIIKKDPKK 405
Cdd:pfam06039 322 LKNGSLLDLFKSIRPSNILPMLAVGLDNLDLTKYLIGQVLQSHEDRMEALREFFPEAKDEDWELITAGQRVQVIKKDEEK 401
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090  406 GGILQFGTELVAAKDGSLAALLGASPGASVTVSIMLELIEKCFPSK-AKGEWAGKLAEIFPAREKVLETDAALYRKINTQ 484
Cdd:pfam06039 402 GGVLQFGTEVVASADGSIAALLGASPGASTAVSIMLEVLERCFPERmASPEWQPKLKEMIPSYGQKLNDDPELLAEIRAR 481

                  ....*..
gi 495249090  485 NNVALEL 491
Cdd:pfam06039 482 TSKVLGL 488
PRK05257 PRK05257
malate:quinone oxidoreductase; Validated
2-491 0e+00

malate:quinone oxidoreductase; Validated


Pssm-ID: 179979  Cd Length: 494  Bit Score: 906.05  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090   2 AHNEAVDVVLVGAGIMSATLAVLLKELDPAIKLEVVELMDSGAAESSNPWNNAGTGHAGLCELNYTPQAADGAVDIKKAV 81
Cdd:PRK05257   1 SEESKTDVVLIGGGIMSATLGTLLKELEPEWSITMFERLDGVALESSNGWNNAGTGHSALCELNYTPEKADGSIDISKAV 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090  82 HINTQFEVSKQFWSYLTKKGTFGSCKSFISPVPHLSFVQGDSGVSFLKERFKVLSKHHAFADMEYTEDKATMAEWMPLMM 161
Cdd:PRK05257  81 KINEQFQISRQFWAYLVEKGVLPDPRSFINPVPHMSFVWGEDNVAFLKKRYEALKANPLFAGMEFSEDPAQIKEWAPLMM 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090 162 PGRDPGETLAATRVINGTDVNFGALTNQLLKHLTSAPDAQVKYCKRVTGLKRN-NGGWTVSIKDVNSGNTREVDAKFVFL 240
Cdd:PRK05257 161 EGRDPSQKVAATRIEIGTDVNFGALTRQLVGYLQKQGNFELQLGHEVRDIKRNdDGSWTVTVKDLKTGEKRTVRAKFVFI 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090 241 GAGGAALPLLQASGIEESKGFGGFPISGQWLRCDNPEVVKHHQAKVYSQAAVGSPPMSVPHLDTRVVDGKKSLLFGPYAG 320
Cdd:PRK05257 241 GAGGGALPLLQKSGIPEAKGYGGFPVSGQFLVCENPEVVAQHHAKVYGKASVGAPPMSVPHLDTRVIDGKRSLLFGPFAG 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090 321 FTTKFLKHGSFMDLPLSVRAGNIGPMLAVAKNNMDLTKYLVSEVMQSMEQRLESLRRFYPEAKAEDWRLEVAGQRVQIIK 400
Cdd:PRK05257 321 FSTKFLKNGSLLDLFSSVRPSNLLPMLAVGLDNFDLTKYLISQVMLSDEDRFEALREFYPNAKPEDWELIVAGQRVQIIK 400
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090 401 KDPKKGGILQFGTELVAAKDGSLAALLGASPGASVTVSIMLELIEKCFPSK-AKGEWAGKLAEIFPAREKVLETDAALYR 479
Cdd:PRK05257 401 KDPKKGGVLQFGTEVVSSADGSIAALLGASPGASTAVPIMLEVLEKCFPDRmASPEWQPKLKEMIPSYGQKLNDNPALLE 480
                        490
                 ....*....|..
gi 495249090 480 KINTQNNVALEL 491
Cdd:PRK05257 481 EIRAYTSEVLGL 492
mal_quin_oxido TIGR01320
malate:quinone-oxidoreductase; This membrane-associated enzyme is an alternative to the ...
7-481 0e+00

malate:quinone-oxidoreductase; This membrane-associated enzyme is an alternative to the better-known NAD-dependent malate dehydrogenase as part of the TCA cycle. The reduction of a quinone rather than NAD+ makes the reaction essentially irreversible in the direction of malate oxidation to oxaloacetate. Both forms of malate dehydrogenase are active in E. coli; disruption of this form causes less phenotypic change. In some bacteria, this form is the only or the more important malate dehydrogenase. [Energy metabolism, TCA cycle]


Pssm-ID: 130387  Cd Length: 483  Bit Score: 779.01  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090    7 VDVVLVGAGIMSATLAVLLKELDPAIKLEVVELMDSGAAESSNPWNNAGTGHAGLCELNYTPQAADGAVDIKKAVHINTQ 86
Cdd:TIGR01320   1 TDVVLIGAGIMSATLGVLLRELEPNWSITLIERLDAVAAESSNPWNNAGTGHSALCELNYTPEMADGSIDIAKAVGINEQ 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090   87 FEVSKQFWSYLTKKGTFGSCKSFISPVPHLSFVQGDSGVSFLKERFKVLSKHHAFADMEYTEDKATMAEWMPLMMPGRDP 166
Cdd:TIGR01320  81 FQVSRQFWAHLVEEGILTDPKSFINPVPHVSFVHGSDGVAYLKKRYEALKGHPLFEGMEFSEDPATFAEWLPLMAAGRDF 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090  167 GETLAATRVINGTDVNFGALTNQLLKHLtSAPDAQVKYCKRVTGLKRN-NGGWTVSIKDVNSGNTREVDAKFVFLGAGGA 245
Cdd:TIGR01320 161 SEPVAANWAAEGTDVDFGALTKQLLGYL-VQNGTTIRFGHEVRNLKRQsDGSWTVTVKNTRTGGKRTLNTRFVFVGAGGG 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090  246 ALPLLQASGIEESKGFGGFPISGQWLRCDNPEVVKHHQAKVYSQAAVGSPPMSVPHLDTRVVDGKKSLLFGPYAGFTTKF 325
Cdd:TIGR01320 240 ALPLLQKSGIPEVKGFAGFPVSGLFLRCGNPELTEQHRAKVYGQASVGAPPMSVPHLDTRVVDGKKWLLFGPYAGWSPKF 319
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090  326 LKHGSFMDLPLSVRAGNIGPMLAVAKNNMDLTKYLVSEVMQSMEQRLESLRRFYPEAKAEDWRLEVAGQRVQIIKKDPKK 405
Cdd:TIGR01320 320 LKHGSILDLPLSIRPDNLLSMLGVGLTEMDLTKYLIGQLRKSEEERVSALREFYPEAIDSDWELIVAGQRVQVIKKDPEK 399
                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 495249090  406 G-GILQFGTELVAAKDGSLAALLGASPGASVTVSIMLELIEKCFPSKAKgEWAGKLAEIFPAREKVLETDAALYRKI 481
Cdd:TIGR01320 400 GgGVLEFGTTLIADADGSIAGLLGASPGASTAVSIMLDLLERCFPERYQ-SWLPKLKEMVPSYGKKLSSEPALFDEV 475
LhgO COG0579
L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism];
3-481 3.13e-138

L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism];


Pssm-ID: 440344 [Multi-domain]  Cd Length: 418  Bit Score: 404.91  E-value: 3.13e-138
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090   3 HNEAVDVVLVGAGIMSATLAVLLKELDpAIKLEVVELMDSGAAESSNpwNNAGTGHAGLcelNYTPqaadGAVDIKKAVH 82
Cdd:COG0579    1 MMEMYDVVIIGAGIVGLALARELSRYE-DLKVLVLEKEDDVAQESSG--NNSGVIHAGL---YYTP----GSLKARLCVE 70
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090  83 INTQF-EVSKQFwsYLTKKgtfgscksfisPVPHLSFVQGDSGVSFLKERFKVLSKHHaFADMEYTeDKATMAEWMPLMM 161
Cdd:COG0579   71 GNELFyELCREL--GIPFK-----------RCGKLVVATGEEEVAFLEKLYERGKANG-VPGLEIL-DREELRELEPLLS 135
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090 162 PgrdpgETLAATRVINGTDVNFGALTNQLLKHLTsAPDAQVKYCKRVTGLKRNNGGWTVSIkdvnsgNTREVDAKFVFLG 241
Cdd:COG0579  136 D-----EGVAALYSPSTGIVDPGALTRALAENAE-ANGVELLLNTEVTGIEREGDGWEVTT------NGGTIRARFVINA 203
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090 242 AGGAALPLLQASGIeeSKGFGGFPISGQWLRCDNP-EVVKHhqaKVYSQAAVGSPPMSVpHLdTRVVDGkkSLLFGPYAG 320
Cdd:COG0579  204 AGLYADRLAQMAGI--GKDFGIFPVKGEYLVLDKPaELVNA---KVYPVPDPGAPFLGV-HL-TRTIDG--NLLFGPNAV 274
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090 321 FTTKflKHGSFMDLPLSVRAGNIGPMLAvakNNMdLTKYLVSEVMQSMEQRLESLRRFYPEAKAEDWRLEVAGQRVQIIK 400
Cdd:COG0579  275 FVPK--KEDSLLDLFESLRFPNFWPMLA---KNL-LTKYLESVTSLSKEAFLEALRKYVPELPDEDLIPAFAGIRAQIIK 348
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090 401 KDpkkggilqfGTELVAAKD--GSLAALLGASPGASVTVSIMLELIEKCFPSKAKGEWAGKLAEIfpaREKVLETDAAlY 478
Cdd:COG0579  349 PD---------GDFVIEEADdpGSIHVLGIESPGATSALAIAEHVAELLPEKLEEKDWQPKRKMI---SFGELKEDPA-Y 415

                 ...
gi 495249090 479 RKI 481
Cdd:COG0579  416 GEI 418
PTZ00383 PTZ00383
malate:quinone oxidoreductase; Provisional
8-438 9.13e-17

malate:quinone oxidoreductase; Provisional


Pssm-ID: 240393 [Multi-domain]  Cd Length: 497  Bit Score: 82.86  E-value: 9.13e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090   8 DVVLVGAGIMSATLAVLLKELDPAIKLEVVELMDSGAAESSNPWNNAGTGHAGLCELNYTPQaadgavdikKAVHINTQF 87
Cdd:PTZ00383  47 DVVIVGGGVTGTALFYTLSKFTNLKKIALIERRSDFALVASHGKNNSQTIHCGDIETNYTLE---------KARKVKRQA 117
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090  88 EVSKQFWSYLTKKgtfgSCKSFISPVPHLSFVQGDSGVSFLKERFKVLSKhhAFADMEYTEDKaTMAEWMPLMMPGRDPG 167
Cdd:PTZ00383 118 DMLRNYLTKLPPS----ERDSIIFKMQKMVLGVGEKECEFLEKRYPVFKE--LFPSMQLLDKK-EIHRVEPRVVLKNNHT 190
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090 168 ---ETLAATRVING-TDVNFGALTNQLLKHLTS---APDAQVKYC--KRVTGLKRNNGgwtvSIKDVNSgNTREVDAKFV 238
Cdd:PTZ00383 191 lreEPLAALYVPNElTTVDYQKLSESFVKHARRdalVPGKKISINlnTEVLNIERSND----SLYKIHT-NRGEIRARFV 265
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090 239 FLGAGGAALPLLQASGIeeSKGFGGFPISGQWLRCDNpeVVKhhqAKVYsqaAVGSP--PMSVPHLDTRVV-DGKKSllF 315
Cdd:PTZ00383 266 VVSACGYSLLFAQKMGY--GLEYSCLPVAGSFYFSGN--ILN---GKVY---TVQNPalPFAAVHGDPDIIaKGKTR--F 333
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495249090 316 GPYAGFtTKFLKHGSFMDLPLSVRAGNIGP-MLAVAKN---NMDLTKYLVSEVM-----QSMEQRLESLRRFYPEAKAED 386
Cdd:PTZ00383 334 GPTALP-LPLLERYNMSSLPDFLKVWNPDLnLLAVYFDlfkDSTMRKYVLRNFLfevplLNKYLFLKDARKIVPSLTRKD 412
                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|....
gi 495249090 387 WRLEVA--GQRVQIIKKDPKKggiLQFGTELVAAKDGsLAALLGASPGASVTVS 438
Cdd:PTZ00383 413 LRYCVGygGVRPQLIDKVSKK---LLLGEGKIDPGKG-IIFNITPSPGATTCLG 462
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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