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Conserved domains on  [gi|495233089|ref|WP_007957860|]
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flagellar motor stator protein MotA [Pelosinus fermentans]

Protein Classification

flagellar motor stator protein MotA( domain architecture ID 10013003)

motility protein A (MotA) is a flagellar motor stator protein which is energized by a proton (H(+)) motive force

Gene Symbol:  motA
Gene Ontology:  GO:0006935|GO:1902600|GO:0120101
PubMed:  6090403|32931735

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK08124 PRK08124
flagellar motor protein MotA; Validated
 1-261 6.22e-138

flagellar motor protein MotA; Validated


:

Pssm-ID: 181238 [Multi-domain]  Cd Length: 263  Bit Score: 388.55  E-value: 6.22e-138
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495233089   1 MELSTIIGIGLGFVAVGVGMVLKGASLVVLINPAAFLIIIAGTAACLLNAFPMEVLKNFPTLVKMLFKQPEFMSKSDMLK 80
Cdd:PRK08124   1 MDITTIIGLILGLIAVVVGMVVKGASLAVLLNPAAILIIIVGTIAAVMIAFPMSELKKVPKLFKVLFKEKKDPSKEELIE 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495233089  81 MFVELSQTARREGILALESRVEEVPDVFLKTGLSMVIDGLDPDFVGDVLEAEIQGMEERHRVGALIFSQAGSYAPTLGVL 160
Cdd:PRK08124  81 QFVEWASESRREGLLALEAQLDEIDDPFLKRGLKMVIDGQSPEFIRDVLEEEIEAMEERHAAGAAIFTQAGTYAPTLGVL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495233089 161 GAVVGLIAALGNLNDIDALGHSIAAAFVATLLGIFTGYVIWNPFANKLKIMSKKEVDVRKMMVEGILSLQAGDSPTAIEA 240
Cdd:PRK08124 161 GAVIGLIAALGNLSDIEKLGHAISAAFVATLLGIFTGYVLWHPFANKLKRKSKEEIELKYIIIEGVLAIQEGNAPRVIEE 240

                        250       260
                 ....*....|....*....|.
gi 495233089 241 KLKVFISQTEREQMKAKTEEA 261
Cdd:PRK08124 241 KLLGYLSPKERKKLEEGAEKN 261
 
Name Accession Description Interval E-value
PRK08124 PRK08124
flagellar motor protein MotA; Validated
 1-261 6.22e-138

flagellar motor protein MotA; Validated


Pssm-ID: 181238 [Multi-domain]  Cd Length: 263  Bit Score: 388.55  E-value: 6.22e-138
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495233089   1 MELSTIIGIGLGFVAVGVGMVLKGASLVVLINPAAFLIIIAGTAACLLNAFPMEVLKNFPTLVKMLFKQPEFMSKSDMLK 80
Cdd:PRK08124   1 MDITTIIGLILGLIAVVVGMVVKGASLAVLLNPAAILIIIVGTIAAVMIAFPMSELKKVPKLFKVLFKEKKDPSKEELIE 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495233089  81 MFVELSQTARREGILALESRVEEVPDVFLKTGLSMVIDGLDPDFVGDVLEAEIQGMEERHRVGALIFSQAGSYAPTLGVL 160
Cdd:PRK08124  81 QFVEWASESRREGLLALEAQLDEIDDPFLKRGLKMVIDGQSPEFIRDVLEEEIEAMEERHAAGAAIFTQAGTYAPTLGVL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495233089 161 GAVVGLIAALGNLNDIDALGHSIAAAFVATLLGIFTGYVIWNPFANKLKIMSKKEVDVRKMMVEGILSLQAGDSPTAIEA 240
Cdd:PRK08124 161 GAVIGLIAALGNLSDIEKLGHAISAAFVATLLGIFTGYVLWHPFANKLKRKSKEEIELKYIIIEGVLAIQEGNAPRVIEE 240

                        250       260
                 ....*....|....*....|.
gi 495233089 241 KLKVFISQTEREQMKAKTEEA 261
Cdd:PRK08124 241 KLLGYLSPKERKKLEEGAEKN 261
MotA COG1291
Flagellar motor component MotA [Cell motility];
3-261 2.84e-100

Flagellar motor component MotA [Cell motility];


Pssm-ID: 440902 [Multi-domain]  Cd Length: 258  Bit Score: 292.75  E-value: 2.84e-100
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495233089   3 LSTIIGIGLGFVAVGVGMVLKGASLVVLINPAAFLIIIAGTAACLLNAFPMEVLKNFPTLVKMLFKQPEFMSKsDMLKMF 82
Cdd:COG1291    1 MATIIGLVVGLGAVLGGFLLEGGSLGALIQPPSLLIVFGGTLGAVLISFPLKVLKAALKALKKAFKGKKADYE-ELIELL 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495233089  83 VELSQTARREGILALESRVEEVPDVFLKTGLSMVIDGLDPDFVGDVLEAEIQGMEERHRVGALIFSQAGSYAPTLGVLGA 162
Cdd:COG1291   80 VELAEKARKEGLLALESDIEEIDDPFLRDGLRLVVDGTDPEEIRELLETEIEAMEERHEAGAKVFEAMGDYAPAFGIIGT 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495233089 163 VVGLIAALGNLNDIDALGHSIAAAFVATLLGIFTGYVIWNPFANKLKIMSKKEVDVRKMMVEGILSLQAGDSPTAIEAKL 242
Cdd:COG1291  160 VLGLIQMLGNLDDPSALGPGIAVALVTTFYGVLLANLFFLPIANKLKRRSEEEVLLREMIIEGLLAIQAGENPRIIEEKL 239

                        250
                 ....*....|....*....
gi 495233089 243 KVFISQTEREQMKAKTEEA 261
Cdd:COG1291  240 RSFLPPSERPSFEEEELKG 258
MotA_ExbB pfam01618
MotA/TolQ/ExbB proton channel family; This family groups together integral membrane proteins ...
 101-216 2.60e-31

MotA/TolQ/ExbB proton channel family; This family groups together integral membrane proteins that appear to be involved translocation of proteins across a membrane. These proteins are probably proton channels. MotA is an essential component of the flageller motor that uses a proton gradient to generate rotational motion in the flageller. ExbB is part of the TonB-dependent transduction complex. The TonB complex uses the proton gradient across the inner bacterial membrane to transport large molecules across the outer bacterial membrane.


Pssm-ID: 460268  Cd Length: 120  Bit Score: 112.19  E-value: 2.60e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495233089  101 VEEVPDVFLKTGLSMVIDGLDPDFVGDVLEAEIQGMEERHRVGALIFSQAGSYAPTLGVLGAVVGLIAALGNLND----I 176
Cdd:pfam01618   2 ANSPEDRFLKKGLQLVVDGTDPEEIRRALEEAIDREEERLERGLSILATIGSLAPLLGLLGTVLGLIHAFQNLGDagpgL 81

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 495233089  177 DALGHSIAAAFVATLLGIFTGyVIWNPFANKLKIMSKKEV 216
Cdd:pfam01618  82 SALAPGIAEALIATAYGLFVA-IPALPFYNKLKRRSEREV 120
 
Name Accession Description Interval E-value
PRK08124 PRK08124
flagellar motor protein MotA; Validated
 1-261 6.22e-138

flagellar motor protein MotA; Validated


Pssm-ID: 181238 [Multi-domain]  Cd Length: 263  Bit Score: 388.55  E-value: 6.22e-138
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495233089   1 MELSTIIGIGLGFVAVGVGMVLKGASLVVLINPAAFLIIIAGTAACLLNAFPMEVLKNFPTLVKMLFKQPEFMSKSDMLK 80
Cdd:PRK08124   1 MDITTIIGLILGLIAVVVGMVVKGASLAVLLNPAAILIIIVGTIAAVMIAFPMSELKKVPKLFKVLFKEKKDPSKEELIE 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495233089  81 MFVELSQTARREGILALESRVEEVPDVFLKTGLSMVIDGLDPDFVGDVLEAEIQGMEERHRVGALIFSQAGSYAPTLGVL 160
Cdd:PRK08124  81 QFVEWASESRREGLLALEAQLDEIDDPFLKRGLKMVIDGQSPEFIRDVLEEEIEAMEERHAAGAAIFTQAGTYAPTLGVL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495233089 161 GAVVGLIAALGNLNDIDALGHSIAAAFVATLLGIFTGYVIWNPFANKLKIMSKKEVDVRKMMVEGILSLQAGDSPTAIEA 240
Cdd:PRK08124 161 GAVIGLIAALGNLSDIEKLGHAISAAFVATLLGIFTGYVLWHPFANKLKRKSKEEIELKYIIIEGVLAIQEGNAPRVIEE 240

                        250       260
                 ....*....|....*....|.
gi 495233089 241 KLKVFISQTEREQMKAKTEEA 261
Cdd:PRK08124 241 KLLGYLSPKERKKLEEGAEKN 261
MotA COG1291
Flagellar motor component MotA [Cell motility];
3-261 2.84e-100

Flagellar motor component MotA [Cell motility];


Pssm-ID: 440902 [Multi-domain]  Cd Length: 258  Bit Score: 292.75  E-value: 2.84e-100
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495233089   3 LSTIIGIGLGFVAVGVGMVLKGASLVVLINPAAFLIIIAGTAACLLNAFPMEVLKNFPTLVKMLFKQPEFMSKsDMLKMF 82
Cdd:COG1291    1 MATIIGLVVGLGAVLGGFLLEGGSLGALIQPPSLLIVFGGTLGAVLISFPLKVLKAALKALKKAFKGKKADYE-ELIELL 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495233089  83 VELSQTARREGILALESRVEEVPDVFLKTGLSMVIDGLDPDFVGDVLEAEIQGMEERHRVGALIFSQAGSYAPTLGVLGA 162
Cdd:COG1291   80 VELAEKARKEGLLALESDIEEIDDPFLRDGLRLVVDGTDPEEIRELLETEIEAMEERHEAGAKVFEAMGDYAPAFGIIGT 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495233089 163 VVGLIAALGNLNDIDALGHSIAAAFVATLLGIFTGYVIWNPFANKLKIMSKKEVDVRKMMVEGILSLQAGDSPTAIEAKL 242
Cdd:COG1291  160 VLGLIQMLGNLDDPSALGPGIAVALVTTFYGVLLANLFFLPIANKLKRRSEEEVLLREMIIEGLLAIQAGENPRIIEEKL 239

                        250
                 ....*....|....*....
gi 495233089 243 KVFISQTEREQMKAKTEEA 261
Cdd:COG1291  240 RSFLPPSERPSFEEEELKG 258
motC PRK09109
flagellar motor protein; Reviewed
 1-246 1.29e-73

flagellar motor protein; Reviewed


Pssm-ID: 181654 [Multi-domain]  Cd Length: 246  Bit Score: 224.82  E-value: 1.29e-73
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495233089   1 MELSTIIGIGLGFVAVGVGMVLKGASLVVLINPAAFLIIIAGTAACLLNAFPMEVLKNFPTLVKMLFKQPEFmSKSDMLK 80
Cdd:PRK09109   1 MDVLSLIGLILAFVAIIGGQVLEGGHLGSLLNGPAFLIVIGGTLGAVLLQTPLAVFKRAFKILRWVFFPPRS-DLEGGID 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495233089  81 MFVELSQTARREGILALESRVEEVPDVFLKTGLSMVIDGLDPDFVGDVLEAEIQGMEERHRVGALIFSQAGSYAPTLGVL 160
Cdd:PRK09109  80 RIVEWSNTARKEGLLGLEDVADREPDPFARKGLQLLVDGAEPESIRSVLEVEIDTQEHRDLQAAKVFESMGGYAPTIGII 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495233089 161 GAVVGLIAALGNLNDIDALGHSIAAAFVATLLGIFTGYVIWNPFANKLKIMSKKEVDVRKMMVEGILSLQAGDSPTAIEA 240
Cdd:PRK09109 160 GAVMGLIHVMENLADPSQLGSGIAVAFVATIYGVASANLLFLPVANKLKSIIHRQSRYREMLVEGLVAIAEGENPRSIEL 239


                 ....*.
gi 495233089 241 KLKVFI 246
Cdd:PRK09109 240 KLQGYL 245
PRK06926 PRK06926
flagellar motor protein MotP; Reviewed
 5-260 4.48e-61

flagellar motor protein MotP; Reviewed


Pssm-ID: 180755 [Multi-domain]  Cd Length: 271  Bit Score: 193.78  E-value: 4.48e-61
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495233089   5 TIIGIGLGFVAVGVGMVLKG--ASLVVLINPAAFLIIIAGTAACLLNAFPMEVLKNFPTLVKMLFKQPEfMSKSDMLKMF 82
Cdd:PRK06926   8 TPVGIFLGITIVVLGVISNSglSGFLSFIDLTSILIVTGGLCAALFISFSPKDLKLAPRVLKQAFQSQE-DDVEELVQTF 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495233089  83 VELSQTARREGILALESRVEEVPDVFLKTGLSMVIDGLDPDFVGDVLEAEIQGMEERHRVGALIFSQAGSYAPTLGVLGA 162
Cdd:PRK06926  87 VSLSEKARREGLLSLEAELEEVKDPFIKKGLLLAIDGWEPETIRDIMMAEIAAMEERHRKGRRIFEKAGEYAPAWGMIGT 166

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495233089 163 VVGLIAALGNLNDIDALGHSIAAAFVATLLGIFTGYVIWNPFANKLKIMSKKEVDVRKMMVEGILSLQAGDSPTAIEAKL 242
Cdd:PRK06926 167 LVGLVLMLKNLNDPSTLGPNMAIALLTTLYGTLLANLVFLPIAAKLEEKTEEEVFVKQVIIEGVIGVQSGQNPRILEEKL 246

                        250       260
                 ....*....|....*....|..
gi 495233089 243 KVFIS----QTEREQMKAKTEE 260
Cdd:PRK06926 247 SVFSSkedwTKEEEDRKKKEEV 268
PRK08456 PRK08456
flagellar motor protein MotA; Validated
 1-250 2.22e-53

flagellar motor protein MotA; Validated


Pssm-ID: 181434 [Multi-domain]  Cd Length: 257  Bit Score: 173.37  E-value: 2.22e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495233089   1 MELSTIIGIGLGFVAVGVGMVLKGASLVVLINPAAFLIIIAGTAACLLNAFPMEVLKNFPTLVKMLFKQPEfMSKSDMLK 80
Cdd:PRK08456   1 MDLSTILGMVLAVASISVGDILEGGNPLHVIHLSSFIIVVPTALFAAMTATHKKYVKAAYKELKIVFKNPG-VNLNERIK 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495233089  81 MFVELSQTARREGILALESRVEEVPDVFLKTGLSMVIDGLDPDFVGDVLEAEIQGMEERHRVGALIFSQAGSYAPTLGVL 160
Cdd:PRK08456  80 QLVELATLARKDGVLALEGRVAQIEDEFLKNGLSMLVDGKDLEEIKESMEIQIEEMEEYYHGAAHYWITAGETCPTMGLV 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495233089 161 GAVVGLIAALGNLNDIDALGHSIAAAFVATLLGIFTGYVIWNPFANKLKIMSKKEVDVRKMMVEGILSLQAGDSPTAIEA 240
Cdd:PRK08456 160 GAVMGLMLALQKLDNPAEMAAGIAGAFTATVTGIMGSYALFGPWGHKLKAKSKDIIKEKTVILEGILGIAEGANPRDLEE 239

                        250
                 ....*....|
gi 495233089 241 KLKVFISQTE 250
Cdd:PRK08456 240 KLLNYLSPGE 249
PRK08990 PRK08990
flagellar motor protein PomA; Reviewed
 1-252 6.29e-45

flagellar motor protein PomA; Reviewed


Pssm-ID: 181604 [Multi-domain]  Cd Length: 254  Bit Score: 151.73  E-value: 6.29e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495233089   1 MELSTIIGIGLGFVAVGVGMVLKGaSLVVLINPAAFLIIIAGTAACLLNAFPmevLKNFPTLVKMLFKQpeFMSKSD--- 77
Cdd:PRK08990   1 MDLATLIGLIGAFAFVIMAMVLGG-GIGMFVDVPSILIVFGGSLFVVLMKFN---LGQFFGAVKIAGKA--FMFKIDkpe 74

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495233089  78 -MLKMFVELSQTARREGILALESRveEVPDVFLKTGLSMVIDGLDPDFVGDVLEAEIQGMEERHRVGALIFSQAGSYAPT 156
Cdd:PRK08990  75 dLIEQIVEMADAARKGGFLALEEA--EISNSFMQKGVDLLVDGHDGDVVRAALEKDIALTEERHETGIGIFRAFGDVAPA 152

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495233089 157 LGVLGAVVGLIAALGNLNDIDALGHSIAAAFVATLLGIFTGYVIWNPFANKLKIMSKKEVDVRKMMVEGILSLQAGDSPT 236
Cdd:PRK08990 153 MGMIGTLIGLVAMLSNMDDPKSIGPAMAVALLTTLYGAVLANMVAIPIADKLSLRMGEEMLNRNLIMDAVLAIQDGQNPR 232

                        250
                 ....*....|....*.
gi 495233089 237 AIEAKLKVFISQTERE 252
Cdd:PRK08990 233 VIEGFLKNYLAEKKRK 248
MotA_ExbB pfam01618
MotA/TolQ/ExbB proton channel family; This family groups together integral membrane proteins ...
 101-216 2.60e-31

MotA/TolQ/ExbB proton channel family; This family groups together integral membrane proteins that appear to be involved translocation of proteins across a membrane. These proteins are probably proton channels. MotA is an essential component of the flageller motor that uses a proton gradient to generate rotational motion in the flageller. ExbB is part of the TonB-dependent transduction complex. The TonB complex uses the proton gradient across the inner bacterial membrane to transport large molecules across the outer bacterial membrane.


Pssm-ID: 460268  Cd Length: 120  Bit Score: 112.19  E-value: 2.60e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495233089  101 VEEVPDVFLKTGLSMVIDGLDPDFVGDVLEAEIQGMEERHRVGALIFSQAGSYAPTLGVLGAVVGLIAALGNLND----I 176
Cdd:pfam01618   2 ANSPEDRFLKKGLQLVVDGTDPEEIRRALEEAIDREEERLERGLSILATIGSLAPLLGLLGTVLGLIHAFQNLGDagpgL 81

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 495233089  177 DALGHSIAAAFVATLLGIFTGyVIWNPFANKLKIMSKKEV 216
Cdd:pfam01618  82 SALAPGIAEALIATAYGLFVA-IPALPFYNKLKRRSEREV 120
PRK06743 PRK06743
flagellar motor protein MotP; Reviewed
 7-255 2.49e-24

flagellar motor protein MotP; Reviewed


Pssm-ID: 136027  Cd Length: 254  Bit Score: 97.74  E-value: 2.49e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495233089   7 IGIGLGFVAVGVGMVLKGASLVVLIN---PAAFLIIIAGTAACLLNAFPM-EVLKNFPTLVKMLFKQPEFMSKsdMLKMF 82
Cdd:PRK06743   1 VGIIVGFAIVIAAIMLGGGGIKAFKNfldVSSILIVIGGTTATIVVAYRFgEIKKYTKSIFTVLHRREEDLEQ--LTDLF 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495233089  83 VELSQTARREGILALESRVEEVPDVFLKTGLSMVIDGLDPDFVGDVLEAEIQGMEERHRVGALIFSQAGSYAPTLGVLGA 162
Cdd:PRK06743  79 VDFSKKSKKHGLLSLEVDGEQVDNPFIQKGIRLMLSGYDEDELKEVLMKDVETEVYELRKGAALLDKIGDFAPAWGMIGT 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495233089 163 VVGLIAALGNLNDIDALGHSIAAAFVATLLGIFTGYVIWNPFANKLKIMSKKEVDVRKMMVEGILSLQAGDSPTAIEAKL 242
Cdd:PRK06743 159 LIGLIIMLQNLQDTSQIGTGMAVAMLTTLYGSVLANMIAIPLAEKVYRGIEDLYTEKKFVIEAISELYRGQIPSKLKLKL 238

                        250
                 ....*....|...
gi 495233089 243 KVFISQTEREQMK 255
Cdd:PRK06743 239 DTYVYETKIKKVK 251
PRK09110 PRK09110
flagellar motor stator protein MotA;
6-251 2.33e-22

flagellar motor stator protein MotA;


Pssm-ID: 181655 [Multi-domain]  Cd Length: 283  Bit Score: 92.92  E-value: 2.33e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495233089   6 IIGIGLGFVAVGVGMVLKGASLVVLINPAAFLIII-AGTAAcLLNAFPMEVLKNFPTLVKMLFKQPEFmSKS---DMLKM 81
Cdd:PRK09110   4 IIGYIVVLGSVFGGYLLAGGHLGALIQPAELLIIGgAALGA-FIVGNPGKAIKATLKALPKLFKGPKY-KKAdymDLLAL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495233089  82 FVELSQTARREGILALESRVE--EVPDVFLK----------------TGLSMVIDGLDPDFVGDVLEAEIQGMEERHRVG 143
Cdd:PRK09110  82 LYELLRKARQEGMMALEAHIEnpEESPIFAKypkilkdhhlvdficdYLRLMISGNMNPHEIEALMDEEIETHHHEAEVP 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495233089 144 ALIFSQAGSYAPTLGVLGAVVGLIAALGNLN-DIDALGHSIAAAFVATLLGIFTGYVIWNPFANKLKIMSKKEVDVRKMM 222
Cdd:PRK09110 162 AHALQKVADALPAFGIVAAVLGVVKTMGSIDqPPAVLGALIGAALVGTFLGILLAYGFVGPLAARLEQVVEEDTKMYQCI 241

                        250       260       270
                 ....*....|....*....|....*....|
gi 495233089 223 VEGILSLQAGDSPT-AIEAKLKVfISQTER 251
Cdd:PRK09110 242 KVTLLASLNGYAPQiAVEFGRKT-LPSTER 270
PRK12482 PRK12482
flagellar motor stator protein MotA;
6-244 9.00e-14

flagellar motor stator protein MotA;


Pssm-ID: 171532 [Multi-domain]  Cd Length: 287  Bit Score: 69.39  E-value: 9.00e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495233089   6 IIGIGLGFVAVGVGMVLKGASLVVLINPAAFLIIIAGTAACLLNAFPMEVLKNFPTLVKMLFKQ----PEFmsKSDMLKM 81
Cdd:PRK12482   4 LFGLLVVMGCVFGGYLMSGGSLSSIWQPGEIIIILGAGIGAMILGNPKSVLKEMWHQIKGVIRRkeygVEF--QRQLLLL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495233089  82 FVELSQTARREGILALESRVE--EVPDVFLKTGLS----------------MVIDGLDPDFVGDVLEAEIQGMEERHRVG 143
Cdd:PRK12482  82 LYELLEMVQEGGLKRLDQHIEipEESSLFQKYPLIlqqkrlitfisdnfrlMAMGKINQHELEGILDQELDAVEEELLQP 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495233089 144 ALIFSQAGSYAPTLGVLGAVVGLIAALGNLN-DIDALGHSIAAAFVATLLGIFTGYVIWNPFANKLKIMSKKEVDVRKmM 222
Cdd:PRK12482 162 SRSLQRIAEAMPGFGICAAVLGIIITMQSIDgSIAEIGLKVAAALVGTFLGVFICYCLMDPLANAMEQEIKKELSLLE-C 240

                        250       260
                 ....*....|....*....|....
gi 495233089 223 VEGILSLQAGDSPT--AIEAKLKV 244
Cdd:PRK12482 241 VRTVLVAHVAGKPTllAVDAGRKL 264
MotA_N pfam20560
Motility protein A N-terminal; This entry represents the N-terminal domain of Motility protein ...
 6-93 2.22e-05

Motility protein A N-terminal; This entry represents the N-terminal domain of Motility protein A (MotA). MotA is a membrane protein that forms the stator element of the flagellar motor complex together with MotB with 5:2 stoichiometry, which couples ion flow across the cytoplasmic membrane to generate torque, and thus, it is required for rotation of the flagellar motor. This domain contains conserved torque-generating charged residues at the C-terminal and is adjacent pfam01618, which represents MotA TMH3 and TMH4.


Pssm-ID: 466709 [Multi-domain]  Cd Length: 91  Bit Score: 42.00  E-value: 2.22e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 495233089    6 IIGIGLGFVAVGVGMVLKGASLVVLINPAAFLIIIAGTAAC-LLNAFPMEVLKNFPTLVKMLFKQPEFmSKS---DMLKM 81
Cdd:pfam20560   1 IIGIVVVLGCVFGGYALAGGHLGVLWQLPFELLIIGGAAIGaFIIANPMKVLKATLKALPKAFKGSKY-KKAdylDLLAL 79

                          90
                  ....*....|..
gi 495233089   82 FVELSQTARREG 93
Cdd:pfam20560  80 LYELLRKARKEG 91
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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