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Conserved domains on  [gi|494912073|ref|WP_007638112|]
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acetyl-CoA carboxylase biotin carboxyl carrier protein [Paraglaciecola psychrophila]

Protein Classification

acetyl-CoA carboxylase biotin carboxyl carrier protein( domain architecture ID 11423502)

acetyl-CoA carboxylase biotin carboxyl carrier protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA

CATH:  2.40.50.100
Gene Ontology:  GO:0003989|GO:0006633|GO:0009317
PubMed:  1370469
SCOP:  4002909
TCDB:  3.B.1

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
AccB COG0511
Biotin carboxyl carrier protein [Lipid transport and metabolism]; Biotin carboxyl carrier ...
 9-157 2.90e-51

Biotin carboxyl carrier protein [Lipid transport and metabolism]; Biotin carboxyl carrier protein is part of the Pathway/BioSystem: Fatty acid biosynthesis


:

Pssm-ID: 440277 [Multi-domain]  Cd Length: 136  Bit Score: 160.06  E-value: 2.90e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 494912073   9 LIELVEESGISELEITEGEESVRIHRGATEAQIAPQPQFVQQPQFVQQPQFVQQPQLApaaapapetapaiSGHIMCSPM 88
Cdd:COG0511    1 LIELLEESGLTELEVEEGEYKVRIKRGGAAAAAPVAAPAAAAPAAAAPAAAAAAAAAS-------------GGGAVKSPM 67

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 494912073  89 VGTFYRSSSPGVKSFAEVGQKVNVGDTLCIIEAMKMMNQIESDKSGVVKQILVENQDPVEFDQPMFVIE 157
Cdd:COG0511   68 VGTFYRAPSPGAKPFVKVGDKVKAGDTLCIIEAMKMMNEIEAPVSGTVVEILVENGQPVEYGQPLFVIE 136
 
Name Accession Description Interval E-value
AccB COG0511
Biotin carboxyl carrier protein [Lipid transport and metabolism]; Biotin carboxyl carrier ...
 9-157 2.90e-51

Biotin carboxyl carrier protein [Lipid transport and metabolism]; Biotin carboxyl carrier protein is part of the Pathway/BioSystem: Fatty acid biosynthesis


Pssm-ID: 440277 [Multi-domain]  Cd Length: 136  Bit Score: 160.06  E-value: 2.90e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 494912073   9 LIELVEESGISELEITEGEESVRIHRGATEAQIAPQPQFVQQPQFVQQPQFVQQPQLApaaapapetapaiSGHIMCSPM 88
Cdd:COG0511    1 LIELLEESGLTELEVEEGEYKVRIKRGGAAAAAPVAAPAAAAPAAAAPAAAAAAAAAS-------------GGGAVKSPM 67

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 494912073  89 VGTFYRSSSPGVKSFAEVGQKVNVGDTLCIIEAMKMMNQIESDKSGVVKQILVENQDPVEFDQPMFVIE 157
Cdd:COG0511   68 VGTFYRAPSPGAKPFVKVGDKVKAGDTLCIIEAMKMMNEIEAPVSGTVVEILVENGQPVEYGQPLFVIE 136
BCCP TIGR00531
acetyl-CoA carboxylase, biotin carboxyl carrier protein; This model is designed to identify ...
 1-157 2.14e-49

acetyl-CoA carboxylase, biotin carboxyl carrier protein; This model is designed to identify biotin carboxyl carrier protein as a peptide of acetyl-CoA carboxylase. Scoring below the trusted cutoff is a related protein encoded in a region associated with polyketide synthesis in the prokaryote Saccharopolyspora hirsuta, and a reported chloroplast-encoded biotin carboxyl carrier protein that may be highly derived from the last common ancestral sequence. Scoring below the noise cutoff are biotin carboxyl carrier domains of other enzymes such as pyruvate carboxylase.The gene name is accB or fabE. [Fatty acid and phospholipid metabolism, Biosynthesis]


Pssm-ID: 273123 [Multi-domain]  Cd Length: 155  Bit Score: 155.76  E-value: 2.14e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 494912073    1 MDIRKIKKLIELVEESGISELEITEGEESVRIHRGAteAQIAPQPQFVQQPQFVQQPQFVQQPQLAPAAAPAPETAPAIS 80
Cdd:TIGR00531   1 MNIREIKELIKLVEESGITELELKEEEFSVRLSKAA--AAASFSVVQQAAAPVPAQVPAQSSAAVPAPAPAAPAPAADIK 78

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 494912073   81 GHIMCSPMVGTFYRSSSPGVKSFAEVGQKVNVGDTLCIIEAMKMMNQIESDKSGVVKQILVENQDPVEFDQPMFVIE 157
Cdd:TIGR00531  79 GHIVRSPMVGTFYRAPSPDAKPFVEVGDKVNKGQTVCIVEAMKMMNEIEAEKAGTVVAILVENGQPVEYGEPLIVIE 155
PLN02983 PLN02983
biotin carboxyl carrier protein of acetyl-CoA carboxylase
 86-157 3.67e-31

biotin carboxyl carrier protein of acetyl-CoA carboxylase


Pssm-ID: 215533 [Multi-domain]  Cd Length: 274  Bit Score: 112.63  E-value: 3.67e-31
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 494912073  86 SPMVGTFYRSSSPGVKSFAEVGQKVNVGDTLCIIEAMKMMNQIESDKSGVVKQILVENQDPVEFDQPMFVIE 157
Cdd:PLN02983 202 SPMAGTFYRSPAPGEPPFVKVGDKVQKGQVVCIIEAMKLMNEIEADQSGTIVEILAEDGKPVSVDTPLFVIE 273
biotinyl_domain cd06850
The biotinyl-domain or biotin carboxyl carrier protein (BCCP) domain is present in all ...
 85-156 1.21e-22

The biotinyl-domain or biotin carboxyl carrier protein (BCCP) domain is present in all biotin-dependent enzymes, such as acetyl-CoA carboxylase, pyruvate carboxylase, propionyl-CoA carboxylase, methylcrotonyl-CoA carboxylase, geranyl-CoA carboxylase, oxaloacetate decarboxylase, methylmalonyl-CoA decarboxylase, transcarboxylase and urea amidolyase. This domain functions in transferring CO2 from one subsite to another, allowing carboxylation, decarboxylation, or transcarboxylation. During this process, biotin is covalently attached to a specific lysine.


Pssm-ID: 133459 [Multi-domain]  Cd Length: 67  Bit Score: 84.78  E-value: 1.21e-22
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 494912073  85 CSPMVGTFYrssspgvKSFAEVGQKVNVGDTLCIIEAMKMMNQIESDKSGVVKQILVENQDPVEFDQPMFVI 156
Cdd:cd06850    3 TAPMPGTVV-------KVLVKEGDKVEAGQPLAVLEAMKMENEVTAPVAGVVKEILVKEGDQVEAGQLLVVI 67
Biotin_lipoyl pfam00364
Biotin-requiring enzyme; This family covers two Prosite entries, the conserved lysine residue ...
 86-156 3.23e-19

Biotin-requiring enzyme; This family covers two Prosite entries, the conserved lysine residue binds biotin in one group and lipoic acid in the other. Note that the HMM does not currently recognize the Glycine cleavage system H proteins.


Pssm-ID: 395290 [Multi-domain]  Cd Length: 73  Bit Score: 76.48  E-value: 3.23e-19
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 494912073   86 SPMVGTFYRSssPGVKSFAEVGQKVNVGDTLCIIEAMKMMNQIESDKSGVVKQILVENQDPVEFDQPMFVI 156
Cdd:pfam00364   5 SPMIGESVRE--GVVEWLVKVGDKVKAGQPLAEVEAMKMEMEIPAPVAGVVKEILVPEGDTVEVGDPLAKI 73
 
Name Accession Description Interval E-value
AccB COG0511
Biotin carboxyl carrier protein [Lipid transport and metabolism]; Biotin carboxyl carrier ...
 9-157 2.90e-51

Biotin carboxyl carrier protein [Lipid transport and metabolism]; Biotin carboxyl carrier protein is part of the Pathway/BioSystem: Fatty acid biosynthesis


Pssm-ID: 440277 [Multi-domain]  Cd Length: 136  Bit Score: 160.06  E-value: 2.90e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 494912073   9 LIELVEESGISELEITEGEESVRIHRGATEAQIAPQPQFVQQPQFVQQPQFVQQPQLApaaapapetapaiSGHIMCSPM 88
Cdd:COG0511    1 LIELLEESGLTELEVEEGEYKVRIKRGGAAAAAPVAAPAAAAPAAAAPAAAAAAAAAS-------------GGGAVKSPM 67

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 494912073  89 VGTFYRSSSPGVKSFAEVGQKVNVGDTLCIIEAMKMMNQIESDKSGVVKQILVENQDPVEFDQPMFVIE 157
Cdd:COG0511   68 VGTFYRAPSPGAKPFVKVGDKVKAGDTLCIIEAMKMMNEIEAPVSGTVVEILVENGQPVEYGQPLFVIE 136
BCCP TIGR00531
acetyl-CoA carboxylase, biotin carboxyl carrier protein; This model is designed to identify ...
 1-157 2.14e-49

acetyl-CoA carboxylase, biotin carboxyl carrier protein; This model is designed to identify biotin carboxyl carrier protein as a peptide of acetyl-CoA carboxylase. Scoring below the trusted cutoff is a related protein encoded in a region associated with polyketide synthesis in the prokaryote Saccharopolyspora hirsuta, and a reported chloroplast-encoded biotin carboxyl carrier protein that may be highly derived from the last common ancestral sequence. Scoring below the noise cutoff are biotin carboxyl carrier domains of other enzymes such as pyruvate carboxylase.The gene name is accB or fabE. [Fatty acid and phospholipid metabolism, Biosynthesis]


Pssm-ID: 273123 [Multi-domain]  Cd Length: 155  Bit Score: 155.76  E-value: 2.14e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 494912073    1 MDIRKIKKLIELVEESGISELEITEGEESVRIHRGAteAQIAPQPQFVQQPQFVQQPQFVQQPQLAPAAAPAPETAPAIS 80
Cdd:TIGR00531   1 MNIREIKELIKLVEESGITELELKEEEFSVRLSKAA--AAASFSVVQQAAAPVPAQVPAQSSAAVPAPAPAAPAPAADIK 78

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 494912073   81 GHIMCSPMVGTFYRSSSPGVKSFAEVGQKVNVGDTLCIIEAMKMMNQIESDKSGVVKQILVENQDPVEFDQPMFVIE 157
Cdd:TIGR00531  79 GHIVRSPMVGTFYRAPSPDAKPFVEVGDKVNKGQTVCIVEAMKMMNEIEAEKAGTVVAILVENGQPVEYGEPLIVIE 155
PLN02983 PLN02983
biotin carboxyl carrier protein of acetyl-CoA carboxylase
 86-157 3.67e-31

biotin carboxyl carrier protein of acetyl-CoA carboxylase


Pssm-ID: 215533 [Multi-domain]  Cd Length: 274  Bit Score: 112.63  E-value: 3.67e-31
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 494912073  86 SPMVGTFYRSSSPGVKSFAEVGQKVNVGDTLCIIEAMKMMNQIESDKSGVVKQILVENQDPVEFDQPMFVIE 157
Cdd:PLN02983 202 SPMAGTFYRSPAPGEPPFVKVGDKVQKGQVVCIIEAMKLMNEIEADQSGTIVEILAEDGKPVSVDTPLFVIE 273
PRK09282 PRK09282
pyruvate carboxylase subunit B; Validated
 81-157 4.02e-25

pyruvate carboxylase subunit B; Validated


Pssm-ID: 236449 [Multi-domain]  Cd Length: 592  Bit Score: 99.92  E-value: 4.02e-25
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 494912073  81 GHImCSPMVGTFYrssspgvKSFAEVGQKVNVGDTLCIIEAMKMMNQIESDKSGVVKQILVENQDPVEFDQPMFVIE 157
Cdd:PRK09282 523 GAV-TSPMPGTVV-------KVKVKEGDKVKAGDTVLVLEAMKMENEIQAPVDGTVKEILVKEGDRVNPGDVLMEIE 591
biotinyl_domain cd06850
The biotinyl-domain or biotin carboxyl carrier protein (BCCP) domain is present in all ...
 85-156 1.21e-22

The biotinyl-domain or biotin carboxyl carrier protein (BCCP) domain is present in all biotin-dependent enzymes, such as acetyl-CoA carboxylase, pyruvate carboxylase, propionyl-CoA carboxylase, methylcrotonyl-CoA carboxylase, geranyl-CoA carboxylase, oxaloacetate decarboxylase, methylmalonyl-CoA decarboxylase, transcarboxylase and urea amidolyase. This domain functions in transferring CO2 from one subsite to another, allowing carboxylation, decarboxylation, or transcarboxylation. During this process, biotin is covalently attached to a specific lysine.


Pssm-ID: 133459 [Multi-domain]  Cd Length: 67  Bit Score: 84.78  E-value: 1.21e-22
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 494912073  85 CSPMVGTFYrssspgvKSFAEVGQKVNVGDTLCIIEAMKMMNQIESDKSGVVKQILVENQDPVEFDQPMFVI 156
Cdd:cd06850    3 TAPMPGTVV-------KVLVKEGDKVEAGQPLAVLEAMKMENEVTAPVAGVVKEILVKEGDQVEAGQLLVVI 67
PRK07051 PRK07051
biotin carboxyl carrier domain-containing protein;
82-157 1.89e-21

biotin carboxyl carrier domain-containing protein;


Pssm-ID: 180811 [Multi-domain]  Cd Length: 80  Bit Score: 82.37  E-value: 1.89e-21
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 494912073  82 HIMCSPMVGTFYRSSSPGVKSFAEVGQKVNVGDTLCIIEAMKMMNQIESDKSGVVKQILVENQDPVEFDQPMFVIE 157
Cdd:PRK07051   4 HEIVSPLPGTFYRRPSPDAPPYVEVGDAVAAGDVVGLIEVMKQFTEVEAEAAGRVVEFLVEDGEPVEAGQVLARIE 79
Biotin_lipoyl pfam00364
Biotin-requiring enzyme; This family covers two Prosite entries, the conserved lysine residue ...
 86-156 3.23e-19

Biotin-requiring enzyme; This family covers two Prosite entries, the conserved lysine residue binds biotin in one group and lipoic acid in the other. Note that the HMM does not currently recognize the Glycine cleavage system H proteins.


Pssm-ID: 395290 [Multi-domain]  Cd Length: 73  Bit Score: 76.48  E-value: 3.23e-19
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 494912073   86 SPMVGTFYRSssPGVKSFAEVGQKVNVGDTLCIIEAMKMMNQIESDKSGVVKQILVENQDPVEFDQPMFVI 156
Cdd:pfam00364   5 SPMIGESVRE--GVVEWLVKVGDKVKAGQPLAEVEAMKMEMEIPAPVAGVVKEILVPEGDTVEVGDPLAKI 73
Biotinyl_lipoyl_domains cd06663
Biotinyl_lipoyl_domains are present in biotin-dependent carboxylases/decarboxylases, the ...
 100-156 4.68e-16

Biotinyl_lipoyl_domains are present in biotin-dependent carboxylases/decarboxylases, the dihydrolipoyl acyltransferase component (E2) of 2-oxo acid dehydrogenases, and the H-protein of the glycine cleavage system (GCS). These domains transport CO2, acyl, or methylamine, respectively, between components of the complex/protein via a biotinyl or lipoyl group, which is covalently attached to a highly conserved lysine residue.


Pssm-ID: 133456 [Multi-domain]  Cd Length: 73  Bit Score: 68.24  E-value: 4.68e-16
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 494912073 100 VKSFAEVGQKVNVGDTLCIIEAMKMMNQIESDKSGVVKQILVENQDPVEFDQPMFVI 156
Cdd:cd06663   17 VKWLKKVGDKVKKGDVLAEIEAMKATSDVEAPKSGTVKKVLVKEGTKVEGDTPLVKI 73
PycA COG1038
Pyruvate carboxylase [Energy production and conversion]; Pyruvate carboxylase is part of the ...
 81-148 3.81e-13

Pyruvate carboxylase [Energy production and conversion]; Pyruvate carboxylase is part of the Pathway/BioSystem: Urea cycle


Pssm-ID: 440660 [Multi-domain]  Cd Length: 1144  Bit Score: 65.87  E-value: 3.81e-13
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 494912073   81 GHImCSPMVGTFyrssspgVKSFAEVGQKVNVGDTLCIIEAMKMMNQIESDKSGVVKQILVENQDPVE 148
Cdd:COG1038  1077 GHI-GAPMPGTV-------VKVLVKEGDEVKKGDPLLTIEAMKMETTITAPRDGTVKEVLVKEGDQVE 1136
PRK12999 PRK12999
pyruvate carboxylase; Reviewed
 81-148 4.67e-12

pyruvate carboxylase; Reviewed


Pssm-ID: 237263 [Multi-domain]  Cd Length: 1146  Bit Score: 62.46  E-value: 4.67e-12
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 494912073   81 GHImCSPMVGTFyrssspgVKSFAEVGQKVNVGDTLCIIEAMKMMNQIESDKSGVVKQILVENQDPVE 148
Cdd:PRK12999 1077 GHV-GAPMPGSV-------VTVLVKEGDEVKAGDPLAVIEAMKMETTITAPVDGTVKRVLVKAGDQVE 1136
PRK14040 PRK14040
oxaloacetate decarboxylase subunit alpha;
80-156 1.28e-10

oxaloacetate decarboxylase subunit alpha;


Pssm-ID: 237592 [Multi-domain]  Cd Length: 593  Bit Score: 58.40  E-value: 1.28e-10
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 494912073  80 SGHIMCSPMVGTFYrssspgvKSFAEVGQKVNVGDTLCIIEAMKMMNQIESDKSGVVKQILVENQDPVEFDQPMFVI 156
Cdd:PRK14040 523 AGEPVTAPLAGNIF-------KVIVTEGQTVAEGDVLLILEAMKMETEIRAAQAGTVRGIAVKEGDAVAVGDTLLTL 592
PRK05641 PRK05641
putative acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; Validated
 98-153 2.36e-10

putative acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; Validated


Pssm-ID: 235540 [Multi-domain]  Cd Length: 153  Bit Score: 55.64  E-value: 2.36e-10
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 494912073  98 PG--VKSFAEVGQKVNVGDTLCIIEAMKMMNQIESDKSGVVKQILVENQDPVEFDQPM 153
Cdd:PRK05641  92 PGkiLRILVREGQQVKVGQGLLILEAMKMENEIPAPKDGVVKKILVKEGDTVDTGQPL 149
lipoyl_domain cd06849
Lipoyl domain of the dihydrolipoyl acyltransferase component (E2) of 2-oxo acid dehydrogenases. ...
 105-156 6.00e-07

Lipoyl domain of the dihydrolipoyl acyltransferase component (E2) of 2-oxo acid dehydrogenases. 2-oxo acid dehydrogenase multienzyme complexes, like pyruvate dehydrogenase (PDH), 2-oxoglutarate dehydrogenase (OGDH) and branched-chain 2-oxo acid dehydrogenase (BCDH), contain at least three different enzymes, 2-oxo acid dehydrogenase (E1), dihydrolipoyl acyltransferase (E2) and dihydrolipoamide dehydrogenase (E3) and play a key role in redox regulation. E2, the central component of the complex, catalyzes the transfer of the acyl group of CoA from E1 to E3 via reductive acetylation of a lipoyl group covalently attached to a lysine residue.


Pssm-ID: 133458 [Multi-domain]  Cd Length: 74  Bit Score: 44.70  E-value: 6.00e-07
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|..
gi 494912073 105 EVGQKVNVGDTLCIIEAMKMMNQIESDKSGVVKQILVENQDPVEFDQPMFVI 156
Cdd:cd06849   23 KEGDSVEEGDVLAEVETDKATVEVEAPAAGVLAKILVEEGDTVPVGQVIAVI 74
PRK06549 PRK06549
acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; Validated
 80-142 7.69e-06

acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; Validated


Pssm-ID: 235826 [Multi-domain]  Cd Length: 130  Bit Score: 42.88  E-value: 7.69e-06
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 494912073  80 SGHIMCSPMVGTFyrssspgVKSFAEVGQKVNVGDTLCIIEAMKMMNQIESDKSGVVKQILVE 142
Cdd:PRK06549  60 GADAMPSPMPGTI-------LKVLVAVGDQVTENQPLLILEAMKMENEIVASSAGTVTAIHVT 115
AceF COG0508
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component ...
 103-156 1.01e-05

Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component [Energy production and conversion]; Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component is part of the Pathway/BioSystem: Pyruvate oxidation


Pssm-ID: 440274 [Multi-domain]  Cd Length: 77  Bit Score: 41.21  E-value: 1.01e-05
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 494912073 103 FAEVGQKVNVGDTLCIIEAMKMMNQIESDKSGVVKQILVENQDPVEFDQPMFVI 156
Cdd:COG0508   23 LVKEGDTVKEGDPLAEVETDKATMEVPAPAAGVLLEILVKEGDTVPVGAVIAVI 76
PTZ00144 PTZ00144
dihydrolipoamide succinyltransferase; Provisional
 106-156 5.88e-05

dihydrolipoamide succinyltransferase; Provisional


Pssm-ID: 240289 [Multi-domain]  Cd Length: 418  Bit Score: 41.98  E-value: 5.88e-05
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|.
gi 494912073 106 VGQKVNVGDTLCIIEAMKMMNQIESDKSGVVKQILVENQDPVEFDQPMFVI 156
Cdd:PTZ00144  68 VGDYVKEDEVICIIETDKVSVDIRAPASGVITKIFAEEGDTVEVGAPLSEI 118
PRK14042 PRK14042
pyruvate carboxylase subunit B; Provisional
 106-157 3.47e-04

pyruvate carboxylase subunit B; Provisional


Pssm-ID: 172536 [Multi-domain]  Cd Length: 596  Bit Score: 39.70  E-value: 3.47e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|..
gi 494912073 106 VGQKVNVGDTLCIIEAMKMMNQIESDKSGVVKQILVENQDPVEFDQPMFVIE 157
Cdd:PRK14042 543 AGDEVKAGQAVLVIEAMKMETEIKAPANGVVAEILCQKGDKVTPGQVLIRVE 594
PRK08225 PRK08225
acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; Validated
 101-147 8.70e-04

acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; Validated


Pssm-ID: 181304 [Multi-domain]  Cd Length: 70  Bit Score: 35.92  E-value: 8.70e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*..
gi 494912073 101 KSFAEVGQKVNVGDTLCIIEAMKMMNQIESDKSGVVKQILVENQDPV 147
Cdd:PRK08225  14 KIVVKVGDTVEEGQDVVILESMKMEIPIVAEEAGTVKKINVQEGDFV 60
PRK11856 PRK11856
branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed
 100-157 2.26e-03

branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed


Pssm-ID: 237001 [Multi-domain]  Cd Length: 411  Bit Score: 37.08  E-value: 2.26e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 494912073 100 VKSFAEVGQKVNVGDTLCIIEAMKMMNQIESDKSGVVKQILVENQDPVEFDQPMFVIE 157
Cdd:PRK11856  20 VEWLVKVGDTVKEGQPLAEVETDKATVEIPSPVAGTVAKLLVEEGDVVPVGSVIAVIE 77
PRK14875 PRK14875
acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
 103-156 3.11e-03

acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional


Pssm-ID: 184875 [Multi-domain]  Cd Length: 371  Bit Score: 36.85  E-value: 3.11e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 494912073 103 FAEVGQKVNVGDTLCIIEAMKMMNQIESDKSGVVKQILVENQDPVEFDQPMFVI 156
Cdd:PRK14875  23 LVQEGDEVEKGDELLDVETDKITNEVEAPAAGTLRRQVAQEGETLPVGALLAVV 76
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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