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Conserved domains on  [gi|494798220|ref|WP_007533628|]
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MULTISPECIES: DUF1153 domain-containing protein [Rhizobium/Agrobacterium group]

Protein Classification

DUF1153 domain-containing protein( domain architecture ID 10535147)

uncharacterized protein containing DUF1153 domain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF1153 pfam06627
Protein of unknown function (DUF1153); This family consists of several short, hypothetical ...
 6-90 1.80e-55

Protein of unknown function (DUF1153); This family consists of several short, hypothetical bacterial proteins of unknown function.


:

Pssm-ID: 429042  Cd Length: 87  Bit Score: 165.91  E-value: 1.80e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 494798220   6 RPRVKYVIGPDGSPLTIADLPPPNTRRWVIRRKAEVVAAVRGGLLSLEEACERYTLTVEEFLSWQSSINSHGLAGLRTTR 85
Cdd:pfam06627  3 VTGPRYVTGPDGSPLTRADLPPPNTRRWVARRKAEVVAAVRGGLLTLDEACERYGLSEEEFASWQRAIDRHGLAGLRTTR 82


                 ....*
gi 494798220  86 IQQYR 90
Cdd:pfam06627 83 IQQYR 87
 
Name Accession Description Interval E-value
DUF1153 pfam06627
Protein of unknown function (DUF1153); This family consists of several short, hypothetical ...
 6-90 1.80e-55

Protein of unknown function (DUF1153); This family consists of several short, hypothetical bacterial proteins of unknown function.


Pssm-ID: 429042  Cd Length: 87  Bit Score: 165.91  E-value: 1.80e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 494798220   6 RPRVKYVIGPDGSPLTIADLPPPNTRRWVIRRKAEVVAAVRGGLLSLEEACERYTLTVEEFLSWQSSINSHGLAGLRTTR 85
Cdd:pfam06627  3 VTGPRYVTGPDGSPLTRADLPPPNTRRWVARRKAEVVAAVRGGLLTLDEACERYGLSEEEFASWQRAIDRHGLAGLRTTR 82


                 ....*
gi 494798220  86 IQQYR 90
Cdd:pfam06627 83 IQQYR 87
 
Name Accession Description Interval E-value
DUF1153 pfam06627
Protein of unknown function (DUF1153); This family consists of several short, hypothetical ...
 6-90 1.80e-55

Protein of unknown function (DUF1153); This family consists of several short, hypothetical bacterial proteins of unknown function.


Pssm-ID: 429042  Cd Length: 87  Bit Score: 165.91  E-value: 1.80e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 494798220   6 RPRVKYVIGPDGSPLTIADLPPPNTRRWVIRRKAEVVAAVRGGLLSLEEACERYTLTVEEFLSWQSSINSHGLAGLRTTR 85
Cdd:pfam06627  3 VTGPRYVTGPDGSPLTRADLPPPNTRRWVARRKAEVVAAVRGGLLTLDEACERYGLSEEEFASWQRAIDRHGLAGLRTTR 82


                 ....*
gi 494798220  86 IQQYR 90
Cdd:pfam06627 83 IQQYR 87
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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