Na(+)-translocating NADH-quinone reductase subunit C is part of the Na(+)-NQR complex that couples the respiratory chain to ion translocation across the membrane in order to build up an electrochemical gradient
Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC [Energy production and ...
1-259
1.64e-145
Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC [Energy production and conversion]; Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC is part of the Pathway/BioSystem: Na+-translocating NADH dehydrogenase
Pssm-ID: 442116 Cd Length: 257 Bit Score: 407.67 E-value: 1.64e-145
NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit; This model represents the NqrC ...
5-253
1.24e-105
NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit; This model represents the NqrC subunit of the six-protein, Na(+)-pumping NADH-quinone reductase of a number of marine and pathogenic Gram-negative bacteria. This oxidoreductase complex functions primarily as a sodium ion pump. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273886 Cd Length: 251 Bit Score: 306.24 E-value: 1.24e-105
FMN-binding domain; This conserved region includes the FMN-binding site of the NqrC protein as ...
147-235
4.14e-10
FMN-binding domain; This conserved region includes the FMN-binding site of the NqrC protein as well as the NosR and NirI regulatory proteins. This domain is post-translationally flavinylated that may facilitate electron transfer, and thus, resembles multiheme cytochromes.
Pssm-ID: 461226 [Multi-domain] Cd Length: 71 Bit Score: 54.54 E-value: 4.14e-10
Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC [Energy production and ...
1-259
1.64e-145
Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC [Energy production and conversion]; Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC is part of the Pathway/BioSystem: Na+-translocating NADH dehydrogenase
Pssm-ID: 442116 Cd Length: 257 Bit Score: 407.67 E-value: 1.64e-145
NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit; This model represents the NqrC ...
5-253
1.24e-105
NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit; This model represents the NqrC subunit of the six-protein, Na(+)-pumping NADH-quinone reductase of a number of marine and pathogenic Gram-negative bacteria. This oxidoreductase complex functions primarily as a sodium ion pump. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273886 Cd Length: 251 Bit Score: 306.24 E-value: 1.24e-105
Na+-translocating ferredoxin:NAD+ oxidoreductase RNF, RnfG subunit [Energy production and ...
124-240
2.03e-10
Na+-translocating ferredoxin:NAD+ oxidoreductase RNF, RnfG subunit [Energy production and conversion]; Na+-translocating ferredoxin:NAD+ oxidoreductase RNF, RnfG subunit is part of the Pathway/BioSystem: Na+-translocating Fd:NADH oxidoreductase
Pssm-ID: 443697 [Multi-domain] Cd Length: 192 Bit Score: 58.68 E-value: 2.03e-10
FMN-binding domain; This conserved region includes the FMN-binding site of the NqrC protein as ...
147-235
4.14e-10
FMN-binding domain; This conserved region includes the FMN-binding site of the NqrC protein as well as the NosR and NirI regulatory proteins. This domain is post-translationally flavinylated that may facilitate electron transfer, and thus, resembles multiheme cytochromes.
Pssm-ID: 461226 [Multi-domain] Cd Length: 71 Bit Score: 54.54 E-value: 4.14e-10
electron transport complex, RnfABCDGE type, G subunit; The six subunit complex RnfABCDGE in ...
101-234
3.96e-09
electron transport complex, RnfABCDGE type, G subunit; The six subunit complex RnfABCDGE in Rhodobacter capsulatus encodes an apparent NADH oxidoreductase responsible for electron transport to nitrogenase, necessary for nitrogen fixation. A closely related complex in E. coli, RsxABCDGE (Reducer of SoxR), reduces the 2Fe-2S-containing superoxide sensor SoxR, active as a transcription factor when oxidized. This family of putative NADH oxidoreductase complexes exists in many of the same species as the related NQR, a Na(+)-translocating NADH-quinone reductase, but is distinct. This model describes the A subunit. [Energy metabolism, Electron transport]
Pssm-ID: 273889 [Multi-domain] Cd Length: 186 Bit Score: 54.67 E-value: 3.96e-09
Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
References:
Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
of the residues that compose this conserved feature have been mapped to the query sequence.
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