|
Name |
Accession |
Description |
Interval |
E-value |
| recA |
PRK09354 |
recombinase A; Provisional |
1-342 |
0e+00 |
|
recombinase A; Provisional
Pssm-ID: 236476 [Multi-domain] Cd Length: 349 Bit Score: 699.24 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 1 MDENKSKALNAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIIEIYGPESSGKTTMTLQAIA 80
Cdd:PRK09354 3 MDEEKQKALEAALKQIEKQFGKGSIMRLGDDAAMDVEVISTGSLALDIALGIGGLPRGRIVEIYGPESSGKTTLALHAIA 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 81 ECQKAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQALEIADMLVRSGAIDLIVVDSVAALTPRAEIEGEMGD 160
Cdd:PRK09354 83 EAQKAGGTAAFIDAEHALDPVYAKKLGVDIDNLLVSQPDTGEQALEIADTLVRSGAVDLIVVDSVAALVPKAEIEGEMGD 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 161 SHMGLQARLMSQALRKITGNAKRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRVGQVKEGDEIVGSE 240
Cdd:PRK09354 163 SHVGLQARLMSQALRKLTGNISKSNTTVIFINQIREKIGVMFGNPETTTGGNALKFYASVRLDIRRIGTIKDGDEVIGNR 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 241 TKVKVVKNKMAPPFREALFQILYGKGVNHLGELVDLAVQQEIVQKAGAWYSYQGEKIGQGKNNTIRHLEEHPELAQTIEK 320
Cdd:PRK09354 243 TKVKVVKNKVAPPFKQAEFDIMYGEGISREGELIDLGVELGIIEKSGAWYSYNGEKIGQGRENAKQYLKENPELADEIEK 322
|
330 340
....*....|....*....|..
gi 491320529 321 LIREQLLTTGNVVEEKDEEEPD 342
Cdd:PRK09354 323 KIREKLGLSAAAAEEEEEEDEE 344
|
|
| RecA |
COG0468 |
RecA/RadA recombinase [Replication, recombination and repair]; |
1-342 |
0e+00 |
|
RecA/RadA recombinase [Replication, recombination and repair];
Pssm-ID: 440236 [Multi-domain] Cd Length: 351 Bit Score: 678.43 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 1 MDENKSKALNAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIIEIYGPESSGKTTMTLQAIA 80
Cdd:COG0468 6 ASSEKEKALEAALSQIEKQFGKGSIMRLGDKARQDVEVISTGSLALDIALGVGGLPRGRIVEIYGPESSGKTTLALHAIA 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 81 ECQKAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQALEIADMLVRSGAIDLIVVDSVAALTPRAEIEGEMGD 160
Cdd:COG0468 86 EAQKAGGIAAFIDAEHALDPEYAKKLGVDIDNLLVSQPDTGEQALEIAETLVRSGAVDLIVVDSVAALVPKAEIEGEMGD 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 161 SHMGLQARLMSQALRKITGNAKRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRVGQVKEGDEIVGSE 240
Cdd:COG0468 166 SHVGLQARLMSQALRKLTGAISKSNTTVIFINQLREKIGVMFGNPETTTGGNALKFYASVRLDIRRIGTIKDGDEVIGNR 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 241 TKVKVVKNKMAPPFREALFQILYGKGVNHLGELVDLAVQQEIVQKAGAWYSYQGEKIGQGKNNTIRHLEEHPELAQTIEK 320
Cdd:COG0468 246 TRVKVVKNKVAPPFKEAEFDIMYGEGISKEGELLDLAVELGIIEKSGAWYSYGGERLGQGRENAKQFLKENPELAEEIEA 325
|
330 340
....*....|....*....|..
gi 491320529 321 LIREQLLTTGNVVEEKDEEEPD 342
Cdd:COG0468 326 KIREKLGLGAVSEAAAAEEEED 347
|
|
| tigrfam_recA |
TIGR02012 |
protein RecA; This model describes orthologs of the recA protein. RecA promotes hybridization ... |
4-324 |
0e+00 |
|
protein RecA; This model describes orthologs of the recA protein. RecA promotes hybridization of homolgous regions of DNA. A segment of ssDNA can be hybridized to another ssDNA region, or to a dsDNA region. ATP is hydrolyzed in the process. Part of the SOS respones, it is regulated by LexA via autocatalytic cleavage. [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 162659 [Multi-domain] Cd Length: 321 Bit Score: 610.53 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 4 NKSKALNAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIIEIYGPESSGKTTMTLQAIAECQ 83
Cdd:TIGR02012 1 DKQKALEAALAQIEKQFGKGSIMRLGEKTVMDVETISTGSLALDLALGVGGLPKGRIIEIYGPESSGKTTLALHAIAEAQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 84 KAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQALEIADMLVRSGAIDLIVVDSVAALTPRAEIEGEMGDSHM 163
Cdd:TIGR02012 81 KAGGTAAFIDAEHALDPVYARKLGVDIDNLLVSQPDTGEQALEIAETLVRSGAVDIIVVDSVAALVPKAEIEGEMGDSHV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 164 GLQARLMSQALRKITGNAKRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRVGQVKEGDEIVGSETKV 243
Cdd:TIGR02012 161 GLQARLMSQALRKLTGALSKSNTTAIFINQIREKIGVMFGNPETTTGGNALKFYASVRLDIRRIGTVKQGEEVVGNRTKV 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 244 KVVKNKMAPPFREALFQILYGKGVNHLGELVDLAVQQEIVQKAGAWYSYQGEKIGQGKNNTIRHLEEHPELAQTIEKLIR 323
Cdd:TIGR02012 241 KVVKNKVAPPFREAEFDILYGEGISKLGEIIDLAVELDIIKKSGSWYSYGDEKLGQGRENAKAFLKENPELAQEIEKKVR 320
|
.
gi 491320529 324 E 324
Cdd:TIGR02012 321 E 321
|
|
| RecA |
pfam00154 |
recA bacterial DNA recombination protein; RecA is a DNA-dependent ATPase and functions in DNA ... |
7-268 |
0e+00 |
|
recA bacterial DNA recombination protein; RecA is a DNA-dependent ATPase and functions in DNA repair systems. RecA protein catalyzes an ATP-dependent DNA strand-exchange reaction that is the central step in the repair of dsDNA breaks by homologous recombination.
Pssm-ID: 425488 [Multi-domain] Cd Length: 262 Bit Score: 543.92 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 7 KALNAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIIEIYGPESSGKTTMTLQAIAECQKAG 86
Cdd:pfam00154 1 KALEAALKQIEKQFGKGSIMKLGDEKKLDVETISTGSLALDIALGIGGYPKGRIIEIYGPESSGKTTLALHAIAEAQKAG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 87 GTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQALEIADMLVRSGAIDLIVVDSVAALTPRAEIEGEMGDSHMGLQ 166
Cdd:pfam00154 81 GTAAFIDAEHALDPVYAKKLGVDIDNLLVSQPDTGEQALEIADMLVRSGAIDLIVVDSVAALVPKAEIEGEMGDSHVGLQ 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 167 ARLMSQALRKITGNAKRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRVGQVKEGDEIVGSETKVKVV 246
Cdd:pfam00154 161 ARLMSQALRKLTGSISKSNTTVIFINQIREKIGVMFGNPETTTGGRALKFYASVRLDIRRIGQIKQGEEVIGNKTKVKVV 240
|
250 260
....*....|....*....|..
gi 491320529 247 KNKMAPPFREALFQILYGKGVN 268
Cdd:pfam00154 241 KNKVAPPFKEAEFDIMYGEGIS 262
|
|
| RecA |
cd00983 |
recombinase A; RecA is a bacterial enzyme which has roles in homologous recombination, DNA ... |
36-269 |
8.46e-174 |
|
recombinase A; RecA is a bacterial enzyme which has roles in homologous recombination, DNA repair, and the induction of the SOS response. RecA couples ATP hydrolysis to DNA strand exchange.
Pssm-ID: 410863 [Multi-domain] Cd Length: 235 Bit Score: 481.67 E-value: 8.46e-174
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 36 VEAVSTGSLTLDIALGIGGLPKGRIIEIYGPESSGKTTMTLQAIAECQKAGGTCAFIDAEHALDPQYARKLGVDIDNLLV 115
Cdd:cd00983 2 VEVIPTGSLSLDIALGIGGLPRGRIIEIYGPESSGKTTLALHAIAEAQKLGGTAAFIDAEHALDPEYAKKLGVDIDNLLV 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 116 SQPDNGEQALEIADMLVRSGAIDLIVVDSVAALTPRAEIEGEMGDSHMGLQARLMSQALRKITGNAKRSNCMVIFINQIR 195
Cdd:cd00983 82 SQPDTGEQALEIADTLIRSGAVDLIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGSLSKSKTTVIFINQLR 161
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 491320529 196 MKIGVMFGSPETTTGGNALKFYASVRLDIRRVGQVKEGDEIVGSETKVKVVKNKMAPPFREALFQILYGKGVNH 269
Cdd:cd00983 162 EKIGVMFGNPETTTGGNALKFYASVRLDIRRIELIKEGEDVIGNRTKVKVVKNKVAPPFKQAEFDILYGEGISR 235
|
|
| recA |
PRK09519 |
intein-containing recombinase RecA; |
4-249 |
2.84e-123 |
|
intein-containing recombinase RecA;
Pssm-ID: 77219 [Multi-domain] Cd Length: 790 Bit Score: 372.89 E-value: 2.84e-123
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 4 NKSKALNAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIIEIYGPESSGKTTMTLQAIAECQ 83
Cdd:PRK09519 6 DREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRGRVIEIYGPESSGKTTVALHAVANAQ 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 84 KAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQALEIADMLVRSGAIDLIVVDSVAALTPRAEIEGEMGDSHM 163
Cdd:PRK09519 86 AAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQPDTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHV 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 164 GLQARLMSQALRKITGNAKRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRVGQVKEGDEIVGSETKV 243
Cdd:PRK09519 166 GLQARLMSQALRKMTGALNNSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVGNRTRV 245
|
....*.
gi 491320529 244 KVVKNK 249
Cdd:PRK09519 246 KVVKNK 251
|
|
| RecA-like |
cd01393 |
RecA family; RecA is a bacterial enzyme which has roles in homologous recombination, DNA ... |
58-226 |
2.07e-61 |
|
RecA family; RecA is a bacterial enzyme which has roles in homologous recombination, DNA repair, and the induction of the SOS response. RecA couples ATP hydrolysis to DNA strand exchange. While prokaryotes have a single RecA protein, eukaryotes have multiple RecA homologs such as Rad51, DMC1 and Rad55/57. Archaea have the RecA-like homologs RadA and RadB.
Pssm-ID: 410881 [Multi-domain] Cd Length: 185 Bit Score: 194.49 E-value: 2.07e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 58 GRIIEIYGPESSGKTTMTLQAIAECQKAGGTCAFIDAEHALDPQYAR-----------KLGVDIDNLLVSQPDNGEQALE 126
Cdd:cd01393 1 GKITEIYGPPGSGKTQLALQLAANALLLGGGVVWIDTEGAFPPSRLVqileaspsselELAEALSRLLYFRPPDTLAHLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 127 IADMLVRSGA----IDLIVVDSVAALTPRAEIEGEMGDSHMGLQARLMSQALRKITGNAKRSNCMVIFINQIRMKIGVMF 202
Cdd:cd01393 81 ALDSLPESLFpppnTSLVVVDSVSALFRKAFPRGGDGDSSSSLRARLLSQLARALQKLAAQFNLAVVVTNQVTTKIRGGS 160
|
170 180
....*....|....*....|....*
gi 491320529 203 G-SPETTTGGNALKFYASVRLDIRR 226
Cdd:cd01393 161 GaSLVPPALGNTWEHSVSTRLLLYR 185
|
|
| archRadB |
cd01394 |
archaeal RadB; The archaeal protein RadB shares similarity RadA, the archaeal functional ... |
39-223 |
4.99e-22 |
|
archaeal RadB; The archaeal protein RadB shares similarity RadA, the archaeal functional homologue to the bacterial RecA. The precise function of RadB is unclear.
Pssm-ID: 410882 [Multi-domain] Cd Length: 216 Bit Score: 92.38 E-value: 4.99e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 39 VSTGSLTLDIALGiGGLPKGRIIEIYGPESSGKTTMTLQAIAECQKAGGTCAFIDAEhALDP----QYAR-KLGVDIDNL 113
Cdd:cd01394 1 LSTGSKSLDSLLG-GGVERGTITQIYGPPGSGKTNICLQLAVEAAKQGKKVVYIDTE-GLSPerfqQIAGeRFESIASNI 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 114 LVSQP-DNGEQALEIADM--LVRSGAIDLIVVDSVAALTpRAEiegEMGDShmGLQARLMSQaLRKITGNAKRSNCMVIF 190
Cdd:cd01394 79 IVFEPySFDEQGVAIQEAekLLKSDKVDLVVVDSATALY-RLE---LGDDS--EANRELSRQ-MSKLLSIARKYDIPVVI 151
|
170 180 190
....*....|....*....|....*....|....*.
gi 491320529 191 INQIRMKIGVMFGSPettTGGNALKfYAS---VRLD 223
Cdd:cd01394 152 TNQVYSDIDDDRLKP---VGGTLLE-HWSkaiIRLE 183
|
|
| recA |
PRK09519 |
intein-containing recombinase RecA; |
245-326 |
2.30e-20 |
|
intein-containing recombinase RecA;
Pssm-ID: 77219 [Multi-domain] Cd Length: 790 Bit Score: 92.46 E-value: 2.30e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 245 VVKNKMAPPFREALFQILYGKGVNHLGELVDLAVQQEIVQKAGAWYSYQGEKIGQGKNNTIRHLEEHPELAQTIEKLIRE 324
Cdd:PRK09519 687 VVVHNCSPPFKQAEFDILYGKGISREGSLIDMGVDQGLIRKSGAWFTYEGEQLGQGKENARNFLVENADVADEIEKKIKE 766
|
..
gi 491320529 325 QL 326
Cdd:PRK09519 767 KL 768
|
|
| Rad51 |
pfam08423 |
Rad51; Rad51 is a DNA repair and recombination protein and is a homolog of the bacterial ... |
39-261 |
9.26e-17 |
|
Rad51; Rad51 is a DNA repair and recombination protein and is a homolog of the bacterial ATPase RecA protein.
Pssm-ID: 462471 [Multi-domain] Cd Length: 255 Bit Score: 78.88 E-value: 9.26e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 39 VSTGSLTLDIALGiGGLPKGRIIEIYGPESSGKTTMTLQAIAECQ------KAGGTCAFIDAEHALDP----QYARKLGV 108
Cdd:pfam08423 19 ITTGSKELDKLLG-GGIETGSITEIFGEFRTGKTQLCHTLCVTCQlplemgGGEGKALYIDTEGTFRPerlvAIAERYGL 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 109 D----IDNLLVSQPDNGEQALEI----ADMLVRSgAIDLIVVDSVAALTpRAEIE--GEMGDSHMGLqARLMSqALRKIt 178
Cdd:pfam08423 98 DpedvLDNVAYARAYNSEHQMQLlqqaAAMMSES-RFALLIVDSATALY-RTDFSgrGELAERQQHL-AKFLR-TLQRL- 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 179 gnAKRSNCMVIFINQIRMKIG---VMF-GSPETTTGGNALKFYASVRLDIRRvgqvKEGDEIVgsetkVKVVKnkmAP-- 252
Cdd:pfam08423 173 --ADEFGVAVVITNQVVAQVDgaaGMFsGDPKKPIGGHIMAHASTTRLSLRK----GRGEQRI-----CKIYD---SPcl 238
|
....*....
gi 491320529 253 PFREALFQI 261
Cdd:pfam08423 239 PESEAVFAI 247
|
|
| recomb_radB |
TIGR02237 |
DNA repair and recombination protein RadB; This family consists exclusively of archaeal RadB ... |
46-226 |
1.93e-16 |
|
DNA repair and recombination protein RadB; This family consists exclusively of archaeal RadB protein, a homolog of bacterial RecA (TIGR02012), eukaryotic RAD51 (TIGR02239) and DMC1 (TIGR02238), and archaeal RadA (TIGR02236).
Pssm-ID: 274047 [Multi-domain] Cd Length: 209 Bit Score: 77.07 E-value: 1.93e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 46 LDIALGiGGLPKGRIIEIYGPESSGKTTMTLQAIAECQKAGGTCAFIDAEhALDPQYARKLGVD-----IDNLLVSQP-- 118
Cdd:TIGR02237 1 IDELLG-GGVERGTITQIYGPPGSGKTNICMILAVNAARQGKKVVYIDTE-GLSPERFKQIAEDrperaLSNFIVFEVfd 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 119 -DNGEQALEIADMLVRSGAIDLIVVDSVAALTpRAEIEGEMGDSHMGLQARLmsQALRKItgnAKRSNCMVIFINQIRMK 197
Cdd:TIGR02237 79 fDEQGVAIQKTSKFIDRDSASLVVVDSFTALY-RLELSDDRISRNRELARQL--TLLLSL---ARKKNLAVVITNQVYTD 152
|
170 180
....*....|....*....|....*....
gi 491320529 198 IGVMFGSPettTGGNALKFYASVRLDIRR 226
Cdd:TIGR02237 153 VNNGTLRP---LGGHLLEHWSKVILRLEK 178
|
|
| radA |
PRK04301 |
DNA repair and recombination protein RadA; Validated |
34-261 |
5.09e-16 |
|
DNA repair and recombination protein RadA; Validated
Pssm-ID: 235273 [Multi-domain] Cd Length: 317 Bit Score: 77.61 E-value: 5.09e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 34 QAVEAVSTGSLTLDIALGiGGLPKGRIIEIYGPESSGKTTMTLQAIAECQKA------GGTCAFIDAEHALDP----QYA 103
Cdd:PRK04301 79 KNVGKITTGSKELDELLG-GGIETQSITEFYGEFGSGKTQICHQLAVNVQLPeekgglEGKAVYIDTEGTFRPerieQMA 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 104 RKLGVDID----NLLVSQPDNGEQALEIADM---LVRSG-AIDLIVVDSVAALTpRAEI--EGEMGDShmglQARLMSQ- 172
Cdd:PRK04301 158 EALGLDPDevldNIHVARAYNSDHQMLLAEKaeeLIKEGeNIKLVIVDSLTAHF-RAEYvgRGNLAER----QQKLNKHl 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 173 -ALRKItgnAKRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRvgqVKEGDEIvgsetkVKVVKnkmA 251
Cdd:PRK04301 233 hDLLRL---ADLYNAAVVVTNQVMARPDAFFGDPTQPIGGHILGHTATFRIYLRK---SKGNKRI------ARLVD---S 297
|
250
....*....|..
gi 491320529 252 P--PFREALFQI 261
Cdd:PRK04301 298 PhlPEGEAVFRI 309
|
|
| radB |
PRK09361 |
DNA repair and recombination protein RadB; Provisional |
37-228 |
6.80e-16 |
|
DNA repair and recombination protein RadB; Provisional
Pssm-ID: 236482 [Multi-domain] Cd Length: 225 Bit Score: 75.67 E-value: 6.80e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 37 EAVSTGSLTLDIALGiGGLPKGRIIEIYGPESSGKTTMTLQAIAECQKAGGTCAFIDAEhALDPQYARKLGVD-----ID 111
Cdd:PRK09361 3 ERLPTGCKMLDELLG-GGFERGTITQIYGPPGSGKTNICLQLAVEAAKNGKKVIYIDTE-GLSPERFKQIAGEdfeelLS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 112 NLLVSQP---DNGEQALEIADMLVRSGaIDLIVVDSVAALTpRAEIEGEmgDSHMGLQARLMSQaLRKITGNAKRSNCMV 188
Cdd:PRK09361 81 NIIIFEPssfEEQSEAIRKAEKLAKEN-VGLIVLDSATSLY-RLELEDE--EDNSKLNRELGRQ-LTHLLKLARKHDLAV 155
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 491320529 189 IFINQIRMKIGVMFGSPettTGGNALKfYAS---VRLDIRRVG 228
Cdd:PRK09361 156 VITNQVYSDIDSDGLRP---LGGHTLE-HWSktiLRLEKFRNG 194
|
|
| archRadA |
cd19515 |
archaeal recombinase Rad51/RadA; This group includes the archaeal protein RadA which is a ... |
39-226 |
2.09e-15 |
|
archaeal recombinase Rad51/RadA; This group includes the archaeal protein RadA which is a homolog of Rad51. RAD51 recombinase plays an essential role in DNA repair by homologous recombination (HR)
Pssm-ID: 410923 [Multi-domain] Cd Length: 233 Bit Score: 74.32 E-value: 2.09e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 39 VSTGSLTLDIALGiGGLPKGRIIEIYGPESSGKTTMTLQAIAECQK------AGGTCAFIDAEHALDP----QYARKLGV 108
Cdd:cd19515 1 ISTGSKELDKLLG-GGIETQAITEVFGEFGSGKTQLCHQLAVNVQLppeeggLNGKAVYIDTENTFRPerimQMAKALGL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 109 DIDNLL----VSQPDNGE-QAL---EIADMLVRSGAIDLIVVDSVAALTpRAEI--EGEMGDSHMGLqARLMSQALRKit 178
Cdd:cd19515 80 DPDEVLdniyVARAYNSNhQMLlveKAEDLIKEGNNIKLLIVDSLTSHF-RAEYvgRGTLAERQQKL-NKHLHDLHRL-- 155
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 491320529 179 gnAKRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRR 226
Cdd:cd19515 156 --ADLYNIAVLVTNQVMAKPDAFFGDPTQAIGGHILGHAATFRVYLRK 201
|
|
| COG4544 |
COG4544 |
Uncharacterized conserved protein [Function unknown]; |
27-152 |
2.57e-15 |
|
Uncharacterized conserved protein [Function unknown];
Pssm-ID: 443609 [Multi-domain] Cd Length: 230 Bit Score: 74.20 E-value: 2.57e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 27 RLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIIEIYGPE-SSGKTTMTLQAIAECQKAGGTCAFIDAEHALDPQYARK 105
Cdd:COG4544 17 RGEGLAAAARAVLPTGFAALDAALPGGGLPRGALHEILGPApGIGELGLLLPLLARLAQAGGPVLWIAPPYDLYAPGLAA 96
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 491320529 106 LGVDIDNLLVSQPDNGEQALEIADMLVRSGAIDLIVVDsVAALTPRA 152
Cdd:COG4544 97 AGLDPERLLLVRARRPADALWAAEEALRSGACGAVVAW-LERLDLTA 142
|
|
| Rad51_DMC1_archRadA |
cd01123 |
recombinase Rad51, DMC1, and archaeal RadA; This group of recombinases includes the eukaryotic ... |
39-267 |
5.02e-15 |
|
recombinase Rad51, DMC1, and archaeal RadA; This group of recombinases includes the eukaryotic proteins RAD51, RAD55/57 and the meiosis-specific protein DMC1, and the archaeal protein RadA. They are closely related to the bacterial RecA group. Rad51 proteins catalyze a similar recombination reaction as RecA, using ATP-dependent DNA binding activity and a DNA-dependent ATPase. However, this reaction is less efficient and requires accessory proteins such as RAD55/57 .
Pssm-ID: 410868 [Multi-domain] Cd Length: 234 Bit Score: 73.33 E-value: 5.02e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 39 VSTGSLTLDIALGiGGLPKGRIIEIYGPESSGKTTMTLQAIAECQ------KAGGTCAFIDAEHALDPQ----YARKLGV 108
Cdd:cd01123 1 ITTGSKELDKLLG-GGIETGSITEMFGEFRTGKTQLCHTLAVTCQlpidrgGGEGKAIYIDTEGTFRPErlraIAQRFGL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 109 D----IDNLLVSQPDNGEQALEI----ADMLVRSgAIDLIVVDSVAALTpRAEI--EGEMGDSHMGLqARLMSqALRKIt 178
Cdd:cd01123 80 DpddvLDNVAYARAFNSDHQTQLldqaAAMMVES-RFKLLIVDSATALY-RTDYsgRGELSARQMHL-AKFLR-MLQRL- 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 179 gnAKRSNCMVIFINQIRMKIG---VMFGSPETTTGGNALKFYASVRLDIRRvGQvkegdeivgSETKVKVVKNKMAPPFR 255
Cdd:cd01123 155 --ADEFGVAVVVTNQVVAQVDgamMFAADPKKPIGGNILAHASTTRLYLRK-GR---------GETRICKIYDSPCLPEA 222
|
250
....*....|..
gi 491320529 256 EALFQIlYGKGV 267
Cdd:cd01123 223 EAVFAI-TADGV 233
|
|
| PLN03186 |
PLN03186 |
DNA repair protein RAD51 homolog; Provisional |
34-261 |
2.70e-13 |
|
DNA repair protein RAD51 homolog; Provisional
Pssm-ID: 178728 [Multi-domain] Cd Length: 342 Bit Score: 69.76 E-value: 2.70e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 34 QAVEAVSTGSLTLDIALGiGGLPKGRIIEIYGPESSGKTTMTLQAIAECQ----KAGGT--CAFIDAEHALDPQ----YA 103
Cdd:PLN03186 100 QEIIQITTGSRELDKILE-GGIETGSITEIYGEFRTGKTQLCHTLCVTCQlpldQGGGEgkAMYIDTEGTFRPQrliqIA 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 104 RKLGVD----IDNLLVSQPDNGEQALEI----ADMLVRSgAIDLIVVDSVAALTpRAEIEGEmGDshmgLQAR--LMSQA 173
Cdd:PLN03186 179 ERFGLNgadvLENVAYARAYNTDHQSELlleaASMMAET-RFALMIVDSATALY-RTEFSGR-GE----LSARqmHLGKF 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 174 LRKITGNAKRSNCMVIFINQIRMKI--GVMFGSPETT-TGGNALKFYASVRLDIRRvGQvkegdeivGSETKVKVVKNKM 250
Cdd:PLN03186 252 LRSLQRLADEFGVAVVITNQVVAQVdgSAFFAGPQLKpIGGNIMAHASTTRLALRK-GR--------GENRICKVISSPC 322
|
250
....*....|.
gi 491320529 251 APPfREALFQI 261
Cdd:PLN03186 323 LPE-AEARFSI 332
|
|
| Rad51 |
cd19513 |
RAD51D recombinase; RAD51 recombinase plays an essential role in DNA repair by homologous ... |
39-261 |
4.36e-13 |
|
RAD51D recombinase; RAD51 recombinase plays an essential role in DNA repair by homologous recombination (HR). HR is an important error-free repair mechanism for chromosomal double-strand break (DSB) which otherwise leads to cell cycle arrest and death. RAD51 is recruited to the break site with the help of its paralogs, RAD51D, RAD51B, RAD51C, XRCC3, and XRCC2, where it forms long helical polymers which wrap around the ssDNA tail at the break which leads to pairing and strand invasion.
Pssm-ID: 410921 [Multi-domain] Cd Length: 235 Bit Score: 67.73 E-value: 4.36e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 39 VSTGSLTLDIALGiGGLPKGRIIEIYGPESSGKTTMTLQAIAECQ------KAGGTCAFIDAEHALDPQ----YARKLGV 108
Cdd:cd19513 1 ITTGSKELDKLLG-GGIETGSITELFGEFRTGKTQLCHTLAVTCQlpidqgGGEGKALYIDTEGTFRPErllaIAERYGL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 109 D----IDNLLVSQPDNGEQALEiadMLVRSGAI------DLIVVDSVAALTpRAEIEGEmGDshmgLQARLM--SQALRK 176
Cdd:cd19513 80 NgedvLDNVAYARAYNTDHQMQ---LLIQASAMmaesryALLIVDSATALY-RTDYSGR-GE----LSARQMhlAKFLRM 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 177 ITGNAKRSNCMVIFINQIRMKI--GVMF-GSPETTTGGNALKFYASVRLDIRRvGQvkegdeivgSETKVKVVKNKMAPP 253
Cdd:cd19513 151 LQRLADEFGVAVVITNQVVAQVdgAAMFaGDPKKPIGGNIMAHASTTRLYLRK-GR---------GETRICKIYDSPCLP 220
|
....*...
gi 491320529 254 FREALFQI 261
Cdd:cd19513 221 EAEAVFAI 228
|
|
| recomb_DMC1 |
TIGR02238 |
meiotic recombinase Dmc1; This model describes DMC1, a subfamily of a larger family of DNA ... |
1-261 |
4.57e-13 |
|
meiotic recombinase Dmc1; This model describes DMC1, a subfamily of a larger family of DNA repair and recombination proteins. It is eukaryotic only and most closely related to eukaryotic RAD51. It also resembles archaeal RadA (TIGR02236) and RadB (TIGR02237) and bacterial RecA (TIGR02012). It has been characterized for human as a recombinase active only in meiosis.
Pssm-ID: 131292 [Multi-domain] Cd Length: 313 Bit Score: 69.04 E-value: 4.57e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 1 MDENKSKALNAALSQIEkQFGKNTVMRLGDNTvQAVEAVSTGSLTLDIALGiGGLPKGRIIEIYGPESSGKTTM------ 74
Cdd:TIGR02238 42 LSEAKVDKIKEAASKII-NPGFITAFEISQKR-KKVLKITTGSQALDGILG-GGIESMSITEVFGEFRCGKTQLshtlcv 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 75 TLQAIAECQKAGGTCAFIDAEHALDP----QYARKLGVD----IDNLLVSQPDNGEQALEIADML---VRSGAIDLIVVD 143
Cdd:TIGR02238 119 TAQLPREMGGGNGKVAYIDTEGTFRPdrirAIAERFGVDpdavLDNILYARAYTSEHQMELLDYLaakFSEEPFRLLIVD 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 144 SVAALTpRAEI--EGEMGDSHMGLqarlmSQALRKITGNAKRSNCMVIFINQIRMKIG--VMFGS-PETTTGGNALKFYA 218
Cdd:TIGR02238 199 SIMALF-RVDFsgRGELSERQQKL-----AQMLSRLNKISEEFNVAVFVTNQVQADPGatMTFIAdPKKPIGGHVLAHAS 272
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 491320529 219 SVRLDIRRvgqvKEGDEivgsetkvKVVKNKMAP--PFREALFQI 261
Cdd:TIGR02238 273 TTRILLRK----GRGEE--------RVAKLYDSPdmPEAEASFQI 305
|
|
| DMC1 |
cd19514 |
homologous-pairing protein DMC1; DMC1 has a central role in homologous recombination in ... |
39-261 |
4.69e-13 |
|
homologous-pairing protein DMC1; DMC1 has a central role in homologous recombination in meiosis. It assembles at the sites of programmed DNA double-strand breaks and carries out a search for allelic DNA sequences located on homologous chromatids. It forms octameric rings.
Pssm-ID: 410922 [Multi-domain] Cd Length: 236 Bit Score: 67.77 E-value: 4.69e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 39 VSTGSLTLDIALGiGGLPKGRIIEIYGPESSGKTTM--TLQAIAECQK----AGGTCAFIDAEHALDP----QYARKLGV 108
Cdd:cd19514 1 ISTGSTELDKLLG-GGIESMSITEVFGEFRTGKTQLshTLCVTAQLPGsmggGGGKVAYIDTEGTFRPdrirPIAERFGV 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 109 D----IDNLLVSQPDNGEQALEIADML----VRSGAIDLIVVDSVAAL-----TPRaeieGEMGDSHMGLqARLMSQaLR 175
Cdd:cd19514 80 DhdavLDNILYARAYTSEHQMELLDYVaakfHEEAVFRLLIIDSIMALfrvdfSGR----GELAERQQKL-AQMLSR-LQ 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 176 KItgnAKRSNCMVIFINQIRMKIG--VMFGS-PETTTGGNALKFYASVRLDIRRvgqvKEGDEivgsetkvKVVKNKMAP 252
Cdd:cd19514 154 KI---SEEYNVAVFITNQVTADPGaaMTFQAdPKKPIGGHILAHASTTRISLRK----GRGEE--------RIAKIYDSP 218
|
250
....*....|.
gi 491320529 253 --PFREALFQI 261
Cdd:cd19514 219 dlPENEATFAI 229
|
|
| RAD55 |
COG0467 |
RecA-superfamily ATPase, KaiC/GvpD/RAD55 family [Signal transduction mechanisms]; |
39-206 |
1.09e-12 |
|
RecA-superfamily ATPase, KaiC/GvpD/RAD55 family [Signal transduction mechanisms];
Pssm-ID: 440235 [Multi-domain] Cd Length: 221 Bit Score: 66.48 E-value: 1.09e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 39 VSTGSLTLDIALGiGGLPKGRIIEIYGPESSGKTTMTLQAIAECQKAGGTCAFIDAEHALDP--QYARKLGVDIDNLL-- 114
Cdd:COG0467 2 VPTGIPGLDELLG-GGLPRGSSTLLSGPPGTGKTTLALQFLAEGLRRGEKGLYVSFEESPEQllRRAESLGLDLEEYIes 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 115 -------VSQPDNGEQALEIADML---VRSGAIDLIVVDSVAALtpraeiEGEMGDSHMglqARLMsqaLRKITGNAKRS 184
Cdd:COG0467 81 gllriidLSPEELGLDLEELLARLreaVEEFGAKRVVIDSLSGL------LLALPDPER---LREF---LHRLLRYLKKR 148
|
170 180
....*....|....*....|..
gi 491320529 185 NCMVIFINQIRMKIGVMFGSPE 206
Cdd:COG0467 149 GVTTLLTSETGGLEDEATEGGL 170
|
|
| PTZ00035 |
PTZ00035 |
Rad51 protein; Provisional |
39-226 |
1.66e-11 |
|
Rad51 protein; Provisional
Pssm-ID: 185407 [Multi-domain] Cd Length: 337 Bit Score: 64.25 E-value: 1.66e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 39 VSTGSLTLDIALGiGGLPKGRIIEIYGPESSGKTTM------TLQAIAECQKAGGTCAFIDAEHALDP----QYARKLGV 108
Cdd:PTZ00035 100 ITTGSTQLDKLLG-GGIETGSITELFGEFRTGKTQLchtlcvTCQLPIEQGGGEGKVLYIDTEGTFRPerivQIAERFGL 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 109 D----IDNLLVSQPDNGEQALE----IADMLVRSgAIDLIVVDSVAALTpRAEI--EGEMGDSHMGLqARLMSqALRKIt 178
Cdd:PTZ00035 179 DpedvLDNIAYARAYNHEHQMQllsqAAAKMAEE-RFALLIVDSATALF-RVDYsgRGELAERQQHL-GKFLR-ALQKL- 253
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 491320529 179 gnAKRSNCMVIFINQIRMKIG---VMFGSPETTTGGNALKFYASVRLDIRR 226
Cdd:PTZ00035 254 --ADEFNVAVVITNQVMADVDgasMFVADPKKPIGGHIIAHASTTRLSLRK 302
|
|
| PLN03187 |
PLN03187 |
meiotic recombination protein DMC1 homolog; Provisional |
39-268 |
2.75e-11 |
|
meiotic recombination protein DMC1 homolog; Provisional
Pssm-ID: 215620 [Multi-domain] Cd Length: 344 Bit Score: 64.03 E-value: 2.75e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 39 VSTGSLTLDIALGiGGLPKGRIIEIYGPESSGKTTM------TLQAIAECQKAGGTCAFIDAEHALDP----QYARKLGV 108
Cdd:PLN03187 108 ITTGSQALDELLG-GGIETRCITEAFGEFRSGKTQLahtlcvTTQLPTEMGGGNGKVAYIDTEGTFRPdrivPIAERFGM 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 109 D----IDNLLVSQPDNGEQaleIADMLVRSGA------IDLIVVDSVAAL-----TPRaeieGEMGDShmglQARLmSQA 173
Cdd:PLN03187 187 DadavLDNIIYARAYTYEH---QYNLLLGLAAkmaeepFRLLIVDSVIALfrvdfTGR----GELAER----QQKL-AQM 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 174 LRKITGNAKRSNCMVIFINQIRMKIG--VMFGSPETTTGGNALKFYASVRLDIRRvgqvKEGDEIVgsetkVKVVKnkmA 251
Cdd:PLN03187 255 LSRLTKIAEEFNVAVYMTNQVIADPGggMFISDPKKPAGGHVLAHAATIRLMLRK----GKGEQRV-----CKVFD---A 322
|
250
....*....|....*....
gi 491320529 252 P--PFREALFQILYGkGVN 268
Cdd:PLN03187 323 PnlPEAEAEFQITSG-GIM 340
|
|
| Rad51B |
cd19493 |
RAD51B recombinase; RAD51B recombinase, a RAD51 paralog, plays an important role in DNA repair ... |
47-226 |
8.43e-11 |
|
RAD51B recombinase; RAD51B recombinase, a RAD51 paralog, plays an important role in DNA repair by homologous recombination (HR). HR is an important error-free repair mechanism for chromosomal double-strand break (DSB) which otherwise leads to cell cycle arrest and death. RAD51B, together with the other RAD51 paralogs, RAD51C, RAD51D, XRCC3, and XRCC2, helps recruit RAD51 to the break site.
Pssm-ID: 410901 [Multi-domain] Cd Length: 222 Bit Score: 61.18 E-value: 8.43e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 47 DIALGiGGLPKGRIIEIYGPESSGKT----TMTLQAIAECQKAG--GTCAFIDAEHALDPQYAR---------------- 104
Cdd:cd19493 1 DTALA-GGLPLGAITEITGASGSGKTqfalTLASSAAMPARKGGldGGVLYIDTESKFSAERLAeiaearfpeafsgfme 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 105 ---KLGVDIDNLLVSQPDNGEQALEIADML---VRSGAIDLIVVDSVAALTpRAEIEGEMGD---SHMGLqARLMSqALR 175
Cdd:cd19493 80 eneRAEEMLKRVAVVRVTTLAQLLERLPNLeehILSSGVRLVVIDSIAALV-RREFGGSDGEvteRHNAL-AREAS-SLK 156
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 491320529 176 KItgnAKRSNCMVIFINQIRMKIGVMFGSPETTTG--GNALKFYASVRLDIRR 226
Cdd:cd19493 157 RL---AEEFRIAVLVTNQATTHFGDAGDGSSGVTAalGDAWAHAVNTRLRLER 206
|
|
| recomb_RAD51 |
TIGR02239 |
DNA repair protein RAD51; This eukaryotic sequence family consists of RAD51, a protein ... |
34-268 |
1.44e-10 |
|
DNA repair protein RAD51; This eukaryotic sequence family consists of RAD51, a protein involved in DNA homologous recombination and repair. It is similar in sequence the exclusively meiotic recombinase DMC1 (TIGR02238), to archaeal families RadA (TIGR02236) and RadB (TIGR02237), and to bacterial RecA (TIGR02012).
Pssm-ID: 274048 [Multi-domain] Cd Length: 316 Bit Score: 61.28 E-value: 1.44e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 34 QAVEAVSTGSLTLDIALGiGGLPKGRIIEIYGPESSGKTTMTLQAIAECQ----KAG--GTCAFIDAEHALDPQ----YA 103
Cdd:TIGR02239 73 QEVIQLTTGSKELDKLLG-GGIETGSITEIFGEFRTGKTQLCHTLAVTCQlpidQGGgeGKALYIDTEGTFRPErllaIA 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 104 RKLGVD----IDNLLVSQPDNGEQALEI----ADMLVRSgAIDLIVVDSVAALTpRAEI--EGEMGDSHMGLqARLMsQA 173
Cdd:TIGR02239 152 ERYGLNpedvLDNVAYARAYNTDHQLQLlqqaAAMMSES-RFALLIVDSATALY-RTDFsgRGELSARQMHL-ARFL-RS 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 174 LRKItgnAKRSNCMVIFINQIRMKI---GVMF-GSPETTTGGNALKFYASVRLDIRRvGQvkegdeivGSETKVKVVKNK 249
Cdd:TIGR02239 228 LQRL---ADEFGVAVVITNQVVAQVdgaGSMFaGDPKKPIGGNIMAHASTTRLSLRK-GR--------GEQRICKIYDSP 295
|
250
....*....|....*....
gi 491320529 250 MAPPfREALFQIlYGKGVN 268
Cdd:TIGR02239 296 CLPE-SEAMFAI-YEDGIG 312
|
|
| RepA |
COG3598 |
RecA-family ATPase [Replication, recombination and repair]; |
55-254 |
5.01e-10 |
|
RecA-family ATPase [Replication, recombination and repair];
Pssm-ID: 442817 [Multi-domain] Cd Length: 313 Bit Score: 59.91 E-value: 5.01e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 55 LPKGRIIEIYGPESSGKTTMTLQ---AIAE------CQKAGGTCAFIDAE----------HALDPQYARKLGVDIDNLLV 115
Cdd:COG3598 10 LPEGGVTLLAGPPGTGKSFLALQlaaAVAAggpwlgRRVPPGKVLYLAAEddrgelrrrlKALGADLGLPFADLDGRLRL 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 116 SQPDNGEQALEIADML---VRSGAIDLIVVDSVAALTPraeiegemGDSHMGLQARLMSQALRKItgnAKRSNCMVIFIN 192
Cdd:COG3598 90 LSLAGDLDDTDDLEALeraIEEEGPDLVVIDPLARVFG--------GDENDAEEMRAFLNPLDRL---AERTGAAVLLVH 158
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 491320529 193 QIRmKIGVMFGSPETTTGGNALKFYASVRLDIRRvgqVKEGDEIVgsetkVKVVKNKMAPPF 254
Cdd:COG3598 159 HTG-KGGAGKDSGDRARGSSALRGAARSVLVLSR---EKGEDLRV-----LTRAKSNYGPEI 211
|
|
| XRCC3 |
cd19491 |
XRCC3 recombinase; XRCC3 (X-ray repair complementing defective repair in Chinese hamster cells ... |
46-194 |
7.55e-10 |
|
XRCC3 recombinase; XRCC3 (X-ray repair complementing defective repair in Chinese hamster cells 3) recombinase, a RAD51 paralog, plays an important role in DNA repair by homologous recombination (HR). HR is an important error-free repair mechanism for chromosomal double-strand break (DSB) which otherwise leads to cell cycle arrest and death. XRCC3, together with the other RAD51 paralogs, RAD51B, RAD51C, RAD51D, and XRCC2, helps recruit RAD51 to the break site.
Pssm-ID: 410899 [Multi-domain] Cd Length: 250 Bit Score: 58.46 E-value: 7.55e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 46 LDIALGiGGLPKGRIIEIYGPESSGKTTMTLQAIAECQKA------GGTCAFIDAEHAL-------------DPQYARKL 106
Cdd:cd19491 1 LDELLG-GGIPVGGITEIAGESGAGKTQLCLQLALTVQLPrelgglGGGAVYICTESSFpskrlqqlasslpKRYHLEKA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 107 GVDIDNLLVSQpdngeqaleIADM-------------LVRSGAIDLIVVDSVAALTpRAEIEGEMGDshMGLQARLMSQA 173
Cdd:cd19491 80 KNFLDNIFVEH---------VADLetlehclnyqlpaLLERGPIRLVVIDSIAALF-RSEFDTSRSD--LVERAKYLRRL 147
|
170 180
....*....|....*....|.
gi 491320529 174 LRKITGNAKRSNCMVIFINQI 194
Cdd:cd19491 148 ADHLKRLADKYNLAVVVVNQV 168
|
|
| AAA |
smart00382 |
ATPases associated with a variety of cellular activities; AAA - ATPases associated with a ... |
57-227 |
7.69e-10 |
|
ATPases associated with a variety of cellular activities; AAA - ATPases associated with a variety of cellular activities. This profile/alignment only detects a fraction of this vast family. The poorly conserved N-terminal helix is missing from the alignment.
Pssm-ID: 214640 [Multi-domain] Cd Length: 148 Bit Score: 56.61 E-value: 7.69e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 57 KGRIIEIYGPESSGKTTMTLQAIAECQKAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSqpDNGEQALEIADMLVRSGA 136
Cdd:smart00382 1 PGEVILIVGPPGSGKTTLARALARELGPPGGGVIYIDGEDILEEVLDQLLLIIVGGKKAS--GSGELRLRLALALARKLK 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 137 IDLIVVDSVAALTPRAEiegemgdshmgLQARLMSQALRKITGNAKRSNCMVIFINQirmkigvmfgsPETTTGGNALKF 216
Cdd:smart00382 79 PDVLILDEITSLLDAEQ-----------EALLLLLEELRLLLLLKSEKNLTVILTTN-----------DEKDLGPALLRR 136
|
170
....*....|.
gi 491320529 217 YASVRLDIRRV 227
Cdd:smart00382 137 RFDRRIVLLLI 147
|
|
| KaiC-like |
cd01124 |
Circadian Clock Protein KaiC; KaiC is a circadian clock protein, most studied in cyanobacteria. ... |
39-206 |
9.36e-10 |
|
Circadian Clock Protein KaiC; KaiC is a circadian clock protein, most studied in cyanobacteria. KaiC, an autokinase, autophosphatase, and ATPase, is part of the core oscillator, composed of three proteins: KaiA, KaiB, and KaiC. The circadian oscillation is regulated via KaiC phosphorylation.
Pssm-ID: 410869 [Multi-domain] Cd Length: 222 Bit Score: 58.04 E-value: 9.36e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 39 VSTGSLTLDIALGiGGLPKGRIIEIYGPESSGKTTMTLQAIAECQKAGGTCAFIDAEHALDP--QYARKLGVDIDNL--- 113
Cdd:cd01124 1 VKTGIPGLDELLG-GGIPKGSVTLLTGGPGTGKTLFGLQFLYAGAKNGEPGLFFTFEESPERllRNAKSFGWDFDEMede 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 114 ----LVSQPDNGEQALEIADML------VRSGAIDLIVVDSVAALTPRAEiegemgdshmglQARLMSQALRKITGNAKR 183
Cdd:cd01124 80 gkliIVDAPPTEAGRFSLDELLsrilsiIKSFKAKRVVIDSLSGLRRAKE------------DQMRARRIVIALLNELRA 147
|
170 180
....*....|....*....|....*.
gi 491320529 184 SNCMVIFINQ---IRMKIGVMFGSPE 206
Cdd:cd01124 148 AGVTTIFTSEmrsFLSSESAGGGDVS 173
|
|
| Rad51C |
cd19492 |
RAD51C recombinase; RAD51C recombinase, a RAD51 paralog, plays an important role in DNA repair ... |
58-222 |
2.50e-09 |
|
RAD51C recombinase; RAD51C recombinase, a RAD51 paralog, plays an important role in DNA repair by homologous recombination (HR). HR is an important error-free repair mechanism for chromosomal double-strand break (DSB) which otherwise leads to cell cycle arrest and death. RAD51C, together with the other RAD51 paralogs, RAD51B, RAD51D, XRCC3, and XRCC2, helps recruit RAD51 to the break site. Additionally, RAD51C acts as a mediator in the early steps of DNA damage signaling.
Pssm-ID: 410900 [Multi-domain] Cd Length: 172 Bit Score: 55.69 E-value: 2.50e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 58 GRIIEIYGPESSGKTTMTLQAIAECQKA------GGTCAFIDAEHALDPQYARKLGVD--------IDNLLVSQPDngeq 123
Cdd:cd19492 1 GKITEICGVPGVGKTQLCMQLAVNVQIPkcfgglAGEAIYIDTEGSFNIHYFRVHDYVellalinsLPKFLEDHPK---- 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 124 aleiadmlvrsgaIDLIVVDSVAaLTPRAEIEgemgdsHMGLQARL---MSQALRKItgnAKRSNCMVIFINQIRMKIGV 200
Cdd:cd19492 77 -------------VKLIVVDSIA-FPFRHDFD------DLAQRTRLlngLAQLLHSL---ARQHNLAVVLTNQVTTKISE 133
|
170 180
....*....|....*....|..
gi 491320529 201 MFGSPETTTGGNALKFYASVRL 222
Cdd:cd19492 134 DGQSQLVPALGESWSHACTTRL 155
|
|
| ATPase |
pfam06745 |
KaiC; This family is in the P-loop NTPase superfamily and is found in archaea, bacteria and ... |
39-230 |
5.88e-09 |
|
KaiC; This family is in the P-loop NTPase superfamily and is found in archaea, bacteria and eukaryotes. More than one copy is sometimes found in each protein. This family includes KaiC, which is one of the Kai proteins among which direct protein-protein association may be a critical process in the generation of circadian rhythms in cyanobacteria.
Pssm-ID: 429095 [Multi-domain] Cd Length: 231 Bit Score: 55.71 E-value: 5.88e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 39 VSTGSLTLDiALGIGGLPKGRIIEIYGPESSGKTTMTLQ-AIAECQKAGGTCAFIDA-EHALD-PQYARKLGVDIDNLL- 114
Cdd:pfam06745 1 VKTGIPGLD-EILKGGFPEGRVVLITGGPGTGKTIFGLQfLYNGALKYGEPGVFVTLeEPPEDlRENARSFGWDLEKLEe 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 115 ------------------VSQPDNGEQALEIADMLVRSGAIDLIVVDSVAALtprAEIEGEMgdshmglQAR-LMSQALR 175
Cdd:pfam06745 80 egklaiidastsgigiaeVEDRFDLEELIERLREAIREIGAKRVVIDSITTL---FYLLKPA-------VAReILRRLKR 149
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 491320529 176 KITGNakrsNCMVIFINQIRMKigvmfgspETTTGGNALKFYAS---VRLDIRRVGQV 230
Cdd:pfam06745 150 VLKGL----GVTAIFTSEKPSG--------EGGIGGYGVEEFIVdgvIRLDLKEIEEE 195
|
|
| XRCC2 |
cd19490 |
XRCC2 recombinase; XRCC2 (X-ray repair complementing defective repair in Chinese hamster cells ... |
58-225 |
5.85e-07 |
|
XRCC2 recombinase; XRCC2 (X-ray repair complementing defective repair in Chinese hamster cells 2) recombinase, a RAD51 paralog, plays an important role in DNA repair by homologous recombination (HR). HR is an important error-free repair mechanism for chromosomal double-strand break (DSB) which otherwise leads to cell cycle arrest and death. XRCC2, together with the other RAD51 paralogs, RAD51B, RAD51C, RAD51D, and XRCC3, helps recruit RAD51 to the break site.
Pssm-ID: 410898 [Multi-domain] Cd Length: 226 Bit Score: 49.65 E-value: 5.85e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 58 GRIIEIYGPESSGKTTMTLQAIAEC---QKAGGTCA--------FIDAEHALDP--------QYARKlgvDIDNLLVSQP 118
Cdd:cd19490 1 GDVIEITGPSGSGKTELLYHLAARCilpSSWGGVPLggleaavvFIDTDGRFDIlrlrsileARIRA---AIQAANSSDD 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 119 DNG-----EQALE---------IADML-------------VRSGAIDLIVVDSVAALTPRAEIEGEMGDSHMGLQARLM- 170
Cdd:cd19490 78 EEDveeiaRECLQrlhifrchsSLQLLatllslenyllslSANPELGLLLIDSISAFYWQDRFSAELARAAPLLQEAALr 157
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 491320529 171 --SQALRKITgnaKRSNCMVIFINQIRMKIgvmfGSPETTTGGNALKFYASVRLDIR 225
Cdd:cd19490 158 aiLRELRRLR---RRFQLVVIATKQALFPG----KSASTDNPAANNAVSKASAPSHR 207
|
|
| RadA_SMS_N |
cd01121 |
bacterial RadA DNA repair protein; Sms or bacterial RadA is a DNA repair protein that plays a ... |
25-191 |
1.46e-05 |
|
bacterial RadA DNA repair protein; Sms or bacterial RadA is a DNA repair protein that plays a role in recombination and recombinational repair of DNA damaged by UV radiation, X-rays, and chemical agent and is responsible for the stabilization or processing of branched DNA molecules.
Pssm-ID: 410866 [Multi-domain] Cd Length: 268 Bit Score: 45.99 E-value: 1.46e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 25 VMRLGDNTVQAVEAVSTGSLTLDIALGiGGLPKGRIIEIYGPESSGKTTMTLQAIAECQKAGGTCAFIDAEHALDpQY-- 102
Cdd:cd01121 50 PLPLSDVEAEEEERISTGIGELDRVLG-GGLVPGSVVLIGGDPGIGKSTLLLQVAARLAQRGGKVLYVSGEESLS-QIkl 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 103 -ARKLGVDIDNLLVSQPDNGEQALEiadmLVRSGAIDLIVVDSVAALTpRAEIEGEMGDShmgLQARLMSQALRKItgnA 181
Cdd:cd01121 128 rAERLGLGSDNLYLLAETNLEAILA----EIEELKPSLVVIDSIQTVY-SPELTSSPGSV---SQVRECAAELLRL---A 196
|
170
....*....|
gi 491320529 182 KRSNCMVIFI 191
Cdd:cd01121 197 KETGIPVFLV 206
|
|
| RecA-like_superfamily |
cd01120 |
RecA-like_NTPases; RecA-like NTPases. This superfamily includes the NTP binding domain of F1 ... |
61-215 |
3.76e-05 |
|
RecA-like_NTPases; RecA-like NTPases. This superfamily includes the NTP binding domain of F1 and V1 H(+)ATPases, DnaB and related helicases as well as bacterial RecA and related eukaryotic and archaeal recombinases. This group also includes bacterial conjugation proteins and related DNA transfer proteins involved in type II and type IV secretion.
Pssm-ID: 410865 [Multi-domain] Cd Length: 119 Bit Score: 42.49 E-value: 3.76e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 61 IEIYGPESSGKTTMTLQAIAECQKAGGTCAFIDAehaldpqyarklgvdidnllvsqpdngeqaLEIADMLVRS----GA 136
Cdd:cd01120 1 ILITGPPGSGKTTLLLQFAEQALLSDEPVIFISF------------------------------LDTILEAIEDlieeKK 50
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 491320529 137 IDLIVVDSVAALTPRAEiegemgdshmGLQARLMSQALRKITGNAKRSNCMVIFINQIRMKIGVMFGSPETTTGGNALK 215
Cdd:cd01120 51 LDIIIIDSLSSLARASQ----------GDRSSELLEDLAKLLRAARNTGITVIATIHSDKFDIDRGGSSNDERLLKSLR 119
|
|
| AAA_25 |
pfam13481 |
AAA domain; This AAA domain is found in a wide variety of presumed DNA repair proteins. |
52-191 |
6.15e-05 |
|
AAA domain; This AAA domain is found in a wide variety of presumed DNA repair proteins.
Pssm-ID: 463892 [Multi-domain] Cd Length: 193 Bit Score: 43.14 E-value: 6.15e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 52 IGG-LPKGRIIEIYGPESSGKTTMTLQ---AIAECQK--------AGGTCAFIDAE----------HALDPQYARKLGVD 109
Cdd:pfam13481 26 IKGlLPAGGLGLLAGAPGTGKTTLALDlaaAVATGKPwlggprvpEQGKVLYVSAEgpadelrrrlRAAGADLDLPARLL 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 110 IDNLLVSQP----DNGEQAL-----EIADMLVRSGAIDLIVVDSVAALTPraeiegemGDSHMGLQARLMSQALRKItgn 180
Cdd:pfam13481 106 FLSLVESLPlfflDRGGPLLdadvdALEAALEEVEDPDLVVIDPLARALG--------GDENSNSDVGRLVKALDRL--- 174
|
170
....*....|.
gi 491320529 181 AKRSNCMVIFI 191
Cdd:pfam13481 175 ARRTGATVLLV 185
|
|
| KaiC-like_N |
cd19488 |
N-terminal domain of KaiC family protein; uncharacterized subfamily; KaiC is a circadian clock ... |
39-150 |
1.20e-04 |
|
N-terminal domain of KaiC family protein; uncharacterized subfamily; KaiC is a circadian clock protein, most studied in cyanobacteria. KaiC, an autokinase, autophosphatase, and ATPase, is part of the core oscillator, composed of three proteins: KaiA, KaiB, and KaiC. The circadian oscillation is regulated via KaiC phosphorylation.
Pssm-ID: 410896 [Multi-domain] Cd Length: 225 Bit Score: 42.72 E-value: 1.20e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 39 VSTGSLTLDIALGiGGLPKGRIIEIYGPESSGKTTMTLQAIAECQKAGGTCAFIDAEHALDP--QYARKLGVDIDNLLV- 115
Cdd:cd19488 1 ISTGIPGLDDILR-GGLPPRRLYLVEGAPGTGKTTLALQFLLEGAANGETGLYITLSETEQElrAVALSHGWSLDGIHIf 79
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 491320529 116 --SQPDNGEQALEIADML----VRSGAIDLIVVDSVAALTP 150
Cdd:cd19488 80 elSPSESALDAAQQYTILhpseLELSETTRLIFERVERLKP 120
|
|
| FlaH |
COG2874 |
Archaellum biogenesis ATPase ArlH/FlaH [Cell motility]; |
39-77 |
2.48e-03 |
|
Archaellum biogenesis ATPase ArlH/FlaH [Cell motility];
Pssm-ID: 442121 Cd Length: 230 Bit Score: 38.66 E-value: 2.48e-03
10 20 30
....*....|....*....|....*....|....*....
gi 491320529 39 VSTGSLTLDIALGiGGLPKGRIIEIYGPESSGKTTMTLQ 77
Cdd:COG2874 3 ISTGNDELDKRLG-GGIPLGSLVLIEGENGTGKSVLSQQ 40
|
|
| Rad51D |
cd19489 |
RAD51D recombinase; RAD51D recombinase, a RAD51 paralog, plays an important role in DNA repair ... |
53-81 |
3.83e-03 |
|
RAD51D recombinase; RAD51D recombinase, a RAD51 paralog, plays an important role in DNA repair by homologous recombination (HR). HR is an important error-free repair mechanism for chromosomal double-strand break (DSB) which otherwise leads to cell cycle arrest and death. RAD51D, together with the other RAD51 paralogs, RAD51B, RAD51C, XRCC3, and XRCC2, helps recruit RAD51 to the break site.
Pssm-ID: 410897 [Multi-domain] Cd Length: 209 Bit Score: 38.00 E-value: 3.83e-03
10 20
....*....|....*....|....*....
gi 491320529 53 GGLPKGRIIEIYGPESSGKTTMTLQAIAE 81
Cdd:cd19489 2 GGLRTGEITELVGESSSGKTQLCLTAAAN 30
|
|
| fbpC |
PRK11432 |
ferric ABC transporter ATP-binding protein; |
13-95 |
6.01e-03 |
|
ferric ABC transporter ATP-binding protein;
Pssm-ID: 183133 [Multi-domain] Cd Length: 351 Bit Score: 38.16 E-value: 6.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 491320529 13 LSQIEKQFGKNTVMrlgDNtvqaveavstgsLTLDIalgigglPKGRIIEIYGPESSGKTTMtLQAIAECQKAGGTCAFI 92
Cdd:PRK11432 9 LKNITKRFGSNTVI---DN------------LNLTI-------KQGTMVTLLGPSGCGKTTV-LRLVAGLEKPTEGQIFI 65
|
...
gi 491320529 93 DAE 95
Cdd:PRK11432 66 DGE 68
|
|
| |
