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MULTISPECIES: peptidoglycan DD-transpeptidase MrdA [Raoultella]
Protein Classification
penicillin-binding protein 2 ( domain architecture ID 11484953 )
penicillin-binding protein (PBP) 2 is a membrane-associated enzyme that is involved in the synthesis of cross-linked peptidoglycan
List of domain hits
Name
Accession
Description
Interval
E-value
PRK10795
PRK10795 penicillin-binding protein 2; Provisional
1-633
0e+00
penicillin-binding protein 2; Provisional
Pssm-ID: 236761 [Multi-domain]
Cd Length: 634
Bit Score: 1355.59
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 1 M KLQNSFRDYTAES S LFVRRALVAFLGILLLTG I L V ANLYN V QIVR Y TDYQTRSNENRIKLVPI P PSRGIIYDRNGTPLA 80
Cdd:PRK10795 2 K KLQNSFRDYTAES A LFVRRALVAFLGILLLTG V L I ANLYN L QIVR F TDYQTRSNENRIKLVPI A PSRGIIYDRNGTPLA 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 81 LNRTIYQLEMMPEKVDN V QQTLDALR D V I DLTDDDIA N F K KER S RS H RFTSIPVK V NL S EVQVARFAVNQYRFPGVEVKG 160
Cdd:PRK10795 82 LNRTIYQLEMMPEKVDN L QQTLDALR S V V DLTDDDIA A F R KER A RS R RFTSIPVK T NL T EVQVARFAVNQYRFPGVEVKG 161
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 161 Y K RRYYPY N SALTHVIGYVSKINDKDV D RLDKEGKLANYA S THDIGKLGIERYYEDVLHG Q TGYEEVEVNNRGRVIRQL K 240
Cdd:PRK10795 162 Y Q RRYYPY G SALTHVIGYVSKINDKDV E RLDKEGKLANYA A THDIGKLGIERYYEDVLHG K TGYEEVEVNNRGRVIRQL H 241
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 241 E V PPQAG R DIYLTLDLKLQQYIETLLAGSRAAVVVTDPRTG S ILALVSTPSYDPNLFVDGISSKDYS A LLNDPN T PL V NR 320
Cdd:PRK10795 242 E Q PPQAG H DIYLTLDLKLQQYIETLLAGSRAAVVVTDPRTG G ILALVSTPSYDPNLFVDGISSKDYS G LLNDPN R PL I NR 321
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 321 ATQGVYPPASTVKPYVAVSALSA N VITRNTSLFDPGWWQLPGS D KRYRDWKKWGHG H LNVTK A LEESADT Y FYQVAYDMG 400
Cdd:PRK10795 322 ATQGVYPPASTVKPYVAVSALSA G VITRNTSLFDPGWWQLPGS E KRYRDWKKWGHG R LNVTK S LEESADT F FYQVAYDMG 401
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 401 IDRLSEWM S KFGYGHYTGIDL S EERSGNMPTREWK L KRFKKPWYQGDTIPVGIGQGYWTATPIQM N KALM I LINDG L VKV 480
Cdd:PRK10795 402 IDRLSEWM G KFGYGHYTGIDL A EERSGNMPTREWK Q KRFKKPWYQGDTIPVGIGQGYWTATPIQM S KALM T LINDG I VKV 481
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 481 PHLL Q ST V EDGKQVPWVQPHEPPVGDIHSG F WEIAKDGM F GVANR G NGTAHKYFASAPYKIAAKSGTAQVFGLKANETYN 560
Cdd:PRK10795 482 PHLL M ST A EDGKQVPWVQPHEPPVGDIHSG Y WEIAKDGM Y GVANR P NGTAHKYFASAPYKIAAKSGTAQVFGLKANETYN 561
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 490997813 561 AH R IAERLRDHKLMTAFAPYNNPQVAVAIILENGGAGPAVGTIMRQILDHIMLGDNNT N LP S ENPAV T A G ED Q 633
Cdd:PRK10795 562 AH K IAERLRDHKLMTAFAPYNNPQVAVAIILENGGAGPAVGTIMRQILDHIMLGDNNT D LP A ENPAV A A A ED H 634
Name
Accession
Description
Interval
E-value
PRK10795
PRK10795 penicillin-binding protein 2; Provisional
1-633
0e+00
penicillin-binding protein 2; Provisional
Pssm-ID: 236761 [Multi-domain]
Cd Length: 634
Bit Score: 1355.59
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 1 M KLQNSFRDYTAES S LFVRRALVAFLGILLLTG I L V ANLYN V QIVR Y TDYQTRSNENRIKLVPI P PSRGIIYDRNGTPLA 80
Cdd:PRK10795 2 K KLQNSFRDYTAES A LFVRRALVAFLGILLLTG V L I ANLYN L QIVR F TDYQTRSNENRIKLVPI A PSRGIIYDRNGTPLA 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 81 LNRTIYQLEMMPEKVDN V QQTLDALR D V I DLTDDDIA N F K KER S RS H RFTSIPVK V NL S EVQVARFAVNQYRFPGVEVKG 160
Cdd:PRK10795 82 LNRTIYQLEMMPEKVDN L QQTLDALR S V V DLTDDDIA A F R KER A RS R RFTSIPVK T NL T EVQVARFAVNQYRFPGVEVKG 161
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 161 Y K RRYYPY N SALTHVIGYVSKINDKDV D RLDKEGKLANYA S THDIGKLGIERYYEDVLHG Q TGYEEVEVNNRGRVIRQL K 240
Cdd:PRK10795 162 Y Q RRYYPY G SALTHVIGYVSKINDKDV E RLDKEGKLANYA A THDIGKLGIERYYEDVLHG K TGYEEVEVNNRGRVIRQL H 241
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 241 E V PPQAG R DIYLTLDLKLQQYIETLLAGSRAAVVVTDPRTG S ILALVSTPSYDPNLFVDGISSKDYS A LLNDPN T PL V NR 320
Cdd:PRK10795 242 E Q PPQAG H DIYLTLDLKLQQYIETLLAGSRAAVVVTDPRTG G ILALVSTPSYDPNLFVDGISSKDYS G LLNDPN R PL I NR 321
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 321 ATQGVYPPASTVKPYVAVSALSA N VITRNTSLFDPGWWQLPGS D KRYRDWKKWGHG H LNVTK A LEESADT Y FYQVAYDMG 400
Cdd:PRK10795 322 ATQGVYPPASTVKPYVAVSALSA G VITRNTSLFDPGWWQLPGS E KRYRDWKKWGHG R LNVTK S LEESADT F FYQVAYDMG 401
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 401 IDRLSEWM S KFGYGHYTGIDL S EERSGNMPTREWK L KRFKKPWYQGDTIPVGIGQGYWTATPIQM N KALM I LINDG L VKV 480
Cdd:PRK10795 402 IDRLSEWM G KFGYGHYTGIDL A EERSGNMPTREWK Q KRFKKPWYQGDTIPVGIGQGYWTATPIQM S KALM T LINDG I VKV 481
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 481 PHLL Q ST V EDGKQVPWVQPHEPPVGDIHSG F WEIAKDGM F GVANR G NGTAHKYFASAPYKIAAKSGTAQVFGLKANETYN 560
Cdd:PRK10795 482 PHLL M ST A EDGKQVPWVQPHEPPVGDIHSG Y WEIAKDGM Y GVANR P NGTAHKYFASAPYKIAAKSGTAQVFGLKANETYN 561
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 490997813 561 AH R IAERLRDHKLMTAFAPYNNPQVAVAIILENGGAGPAVGTIMRQILDHIMLGDNNT N LP S ENPAV T A G ED Q 633
Cdd:PRK10795 562 AH K IAERLRDHKLMTAFAPYNNPQVAVAIILENGGAGPAVGTIMRQILDHIMLGDNNT D LP A ENPAV A A A ED H 634
pbp2_mrdA
TIGR03423 penicillin-binding protein 2; Members of this protein family are penicillin-binding protein 2 ...
19-614
0e+00
penicillin-binding protein 2; Members of this protein family are penicillin-binding protein 2 (PBP-2), a protein whose gene (designated pbpA or mrdA) generally is found next to the gene for RodA, a protein required for rod (bacillus) shape in many bacteria. PBP-2 acts as a transpeptidase for cell elongation (hence, rod-shape). [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
Pssm-ID: 274573 [Multi-domain]
Cd Length: 592
Bit Score: 940.41
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 19 RRALV AFLGI L L L T G I L V A N L YNV Q IV R YTD Y Q T R S NE NRI K LVPIPP S RG I I Y DRNG TP LA L NR TIYQ LE MM PEKVD NV 98
Cdd:TIGR03423 1 RRALV LGGLV L A L F G V L A A R L FYL Q VI R GEE Y A T L S ED NRI R LVPIPP P RG L I L DRNG VL LA D NR PSFS LE IV PEKVD DL 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 99 QQ TLD A L RDVI DL TDD DIA N F K KE RS RS H RF TS IP V K VN L S E VQ VARFAVNQYR F PGVE VKGYKR RYYPY NSALT HV I GY 178
Cdd:TIGR03423 81 DA TLD R L AKLL DL DPE DIA R F L KE LK RS R RF EP IP L K SD L T E EE VARFAVNQYR L PGVE IEARLK RYYPY GELAA HV L GY 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 179 V SK IN DK D VD RL D kegk L ANYA STHD IGK L GIE R YYED V L H G QT GY E EVEVN N RGRVIR Q L KE VPP QA G R D IY LT L D LK L 258
Cdd:TIGR03423 161 V GE IN EE D LE RL E ---- P ANYA GGDY IGK S GIE K YYED E L R G KP GY R EVEVN A RGRVIR T L SR VPP VP G K D LV LT I D AR L 236
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 259 QQ YI E TL L A G S R A AVVV T DPRTG S ILA L VSTPS Y DPNLFVDGISSKDY S ALLNDP NT PL V NRA T QGVYPP A ST V KP Y VA V 338
Cdd:TIGR03423 237 QQ AA E KA L G G R R G AVVV M DPRTG E ILA M VSTPS F DPNLFVDGISSKDY K ALLNDP DR PL L NRA I QGVYPP G ST F KP V VA L 316
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 339 S AL SAN VIT RN T SLFD PG WW QL P G sd K R Y R D WK KW GHG HLNVT KA L EES A D T YFYQ V A YDM GID RLS E WMSK FG Y G HY TG 418
Cdd:TIGR03423 317 A AL EEG VIT PE T RIYC PG YF QL G G -- R R F R C WK RG GHG RVDLR KA I EES C D V YFYQ L A LRL GID KIA E YAKR FG F G QK TG 394
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 419 IDL SE E R SG NM P T REWK L KRF KK PWY Q GDT IP V G IGQGY WTA TP I Q MNK A LMI L I N D G LVKV PHL LQ S TVE - DG KQ V PWV 497
Cdd:TIGR03423 395 IDL PG E K SG LV P S REWK R KRF GQ PWY P GDT LN V S IGQGY VLV TP L Q LAV A TAA L A N G G KLYK PHL VK S IED p DG GV V RRT 474
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 498 Q P HEPPVGD I HSGFWEIAKD GM FG V A N RGN GTA HKYFASA PYK I A A K S GTAQV FG LK AN E T Y N A HR I A ERLRDH K L MT AF 577
Cdd:TIGR03423 475 E P EVLRPLP I SPENLDVVRE GM RD V V N GPG GTA RRARLGL PYK M A G K T GTAQV VS LK QG E K Y D A EQ I P ERLRDH A L FV AF 554
570 580 590
....*....|....*....|....*....|....*...
gi 490997813 578 APY N NP QV AVA I I L E N GG A G PAV - GT I M R Q I L D HIM LG 614
Cdd:TIGR03423 555 APY D NP KI AVA V I V E H GG G G SSA a AP I A R K I M D AYL LG 592
FtsI
COG0768 Cell division protein FtsI, peptidoglycan transpeptidase (Penicillin-binding protein 2) [Cell ...
11-610
0e+00
Cell division protein FtsI, peptidoglycan transpeptidase (Penicillin-binding protein 2) [Cell cycle control, cell division, chromosome partitioning, Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440531 [Multi-domain]
Cd Length: 568
Bit Score: 615.30
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 11 TA E SS LF V RR A L VA FL GI LLL TGI LV AN L YNV Q I V RYTD Y QTRSN ENRI KL VPIP PS RG I IYDRNG TP LA L N RTI Y Q L EM 90
Cdd:COG0768 4 KK E KR LF R RR L L LL FL LV LLL FLL LV GR L FYL Q V V EGDE Y AELAE ENRI RT VPIP AP RG L IYDRNG NV LA T N VPV Y S L YA 83
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 91 M PE K V DNVQQ T LDA L RDVID L TDDDIANFK K ER SR S hrft SIPV K V NLS EVQV AR fa VNQYRF PGV E V KGYKR RYYPY NS 170
Cdd:COG0768 84 D PE E V KDPEE T AEK L AKLLG L DPEELRKKL K KK SR F ---- PVYL K R NLS PEEA AR -- IRALKL PGV Y V EAEYK RYYPY GE 157
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 171 ALT HV I GYV SK IN DK D vdrldkegklanyasth D IGK L G I E RY YED V L H G QT G YEE VEV NN RGRVIR Q L - K E V PP QA G R D 249
Cdd:COG0768 158 LAA HV L GYV GE IN GG D ----------------- G IGK S G L E KA YED L L R G TP G KRR VEV DA RGRVIR D L g E E K PP VP G K D 220
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 250 IY LT L D LK LQ QYI E TL L AGS ------- RA AVVV T DP R TG S ILA LV S T PS Y DPNLFV D G isskdysallnd P NT PL V NRA T 322
Cdd:COG0768 221 LV LT I D SD LQ KIA E EA L KKA veeykak SG AVVV M DP K TG E ILA MA S Y PS F DPNLFV G G ------------ P DE PL R NRA V 288
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 323 QG V Y P P A ST V KP YV A VS AL SAN VIT RN T SLFD PG WWQLP G sd KRY RDW KKW GHG H L NV T K AL EE S ADTY FY QV A YDM GID 402
Cdd:COG0768 289 QG T Y E P G ST F KP FT A AA AL EEG VIT PD T TFDC PG YYRVG G -- RTI RDW DRG GHG T L TL T E AL AK S SNVG FY KL A LRL GID 366
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 403 R L SEWMS KFG Y G HY TGIDL SE E R SG NM P TR ewklkrfk K P WY Q G D T IPVG IGQG y WTA TP I Q MNK A LMILI N D G LVKV PH 482
Cdd:COG0768 367 K L YDYLK KFG L G QK TGIDL PG E A SG LL P SP -------- K R WY P G E T ATMS IGQG - LSV TP L Q LAQ A YAAIA N G G VLVK PH 437
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 483 L LQST V EDGKQ V PWVQ P HEP - P V gd I HSGFW E IAKD GM F GV A N RGN GTA HKY f A SAP Y KI A A K S GTAQV FGLKANET Y NA 561
Cdd:COG0768 438 L VKEI V DPDGE V VKEE P EVL r R V -- I SPETA E TVRE GM E GV V N EPG GTA RRA - A IPG Y RV A G K T GTAQV VDIGNGGY Y KG 514
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*..
gi 490997813 562 HR IA erlrdhk LMTA FAP YN NP QV AVA IIL EN G G -------- A G P AVGT IM RQI L DH 610
Cdd:COG0768 515 RH IA ------- SFVG FAP AD NP RY AVA VVV EN P G ggayggtv A A P VFRE IM EAY L RL 564
Transpeptidase
pfam00905 Penicillin binding protein transpeptidase domain; The active site serine (residue 337 in Swiss: ...
271-609
2.04e-86
Penicillin binding protein transpeptidase domain; The active site serine (residue 337 in Swiss:P14677) is conserved in all members of this family.
Pssm-ID: 425939 [Multi-domain]
Cd Length: 296
Bit Score: 271.60
E-value: 2.04e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 271 AAV VV T DP R TG SI LA L V ST PSYDPN L F vdgisskdysallndp NT PL V NRA TQGV Y P P A ST V KP YV A VS AL SAN V ITRNT 350
Cdd:pfam00905 1 GSA VV L DP K TG EV LA M V GK PSYDPN G F ---------------- IG PL R NRA VTSR Y E P G ST F KP FT A LA AL DNG V LKPDE 64
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 351 SL FD PGWW Q lp GSD K RYR DW KKWGH G HLNVTK ALE E S ADT Y FYQV A YDM G I D R L SEWMS KFGYG HY TGI D L SE E RS G NMP 430
Cdd:pfam00905 65 TI FD WPGK Q -- QGG K SIG DW NQDQV G IGTLRQ ALE Y S SNW Y MQKL A QKL G A D K L RSYLK KFGYG NK TGI G L PG E NA G YLT 142
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 431 TR ewklkrfkkp W YQ G D T IPV GIG qgy W T A TP I Q MNK A LMILI N D G LVKV PHL LQ S TVE dgkqvp W V Q P HEPPVGD I HSG 510
Cdd:pfam00905 143 PY ---------- W LE G A T ASF GIG --- L T I TP L Q QAQ A YAAIA N G G KLVP PHL VK S IED ------ K V D P KVLNKLP I SKS 203
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 511 FW E IA KD GMFG V A N R G N GT AH ky F A SAP YK I A A K S GTAQV F G L K ANET Y NAH riaerlr DHKLMTAF AP YN NP QV A V A II 590
Cdd:pfam00905 204 TA E KV KD MLRL V V N D G T GT GT -- A A VPG YK V A G K T GTAQV A G P K GGGY Y DGA ------- QIGWFVGY AP AD NP KY A F A VL 274
330 340
....*....|....*....|..
gi 490997813 591 LENGGA --- G PAVGT I MRQ IL D 609
Cdd:pfam00905 275 IDDPKR yyg G KVAAP I FKD IL E 296
Name
Accession
Description
Interval
E-value
PRK10795
PRK10795 penicillin-binding protein 2; Provisional
1-633
0e+00
penicillin-binding protein 2; Provisional
Pssm-ID: 236761 [Multi-domain]
Cd Length: 634
Bit Score: 1355.59
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 1 M KLQNSFRDYTAES S LFVRRALVAFLGILLLTG I L V ANLYN V QIVR Y TDYQTRSNENRIKLVPI P PSRGIIYDRNGTPLA 80
Cdd:PRK10795 2 K KLQNSFRDYTAES A LFVRRALVAFLGILLLTG V L I ANLYN L QIVR F TDYQTRSNENRIKLVPI A PSRGIIYDRNGTPLA 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 81 LNRTIYQLEMMPEKVDN V QQTLDALR D V I DLTDDDIA N F K KER S RS H RFTSIPVK V NL S EVQVARFAVNQYRFPGVEVKG 160
Cdd:PRK10795 82 LNRTIYQLEMMPEKVDN L QQTLDALR S V V DLTDDDIA A F R KER A RS R RFTSIPVK T NL T EVQVARFAVNQYRFPGVEVKG 161
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 161 Y K RRYYPY N SALTHVIGYVSKINDKDV D RLDKEGKLANYA S THDIGKLGIERYYEDVLHG Q TGYEEVEVNNRGRVIRQL K 240
Cdd:PRK10795 162 Y Q RRYYPY G SALTHVIGYVSKINDKDV E RLDKEGKLANYA A THDIGKLGIERYYEDVLHG K TGYEEVEVNNRGRVIRQL H 241
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 241 E V PPQAG R DIYLTLDLKLQQYIETLLAGSRAAVVVTDPRTG S ILALVSTPSYDPNLFVDGISSKDYS A LLNDPN T PL V NR 320
Cdd:PRK10795 242 E Q PPQAG H DIYLTLDLKLQQYIETLLAGSRAAVVVTDPRTG G ILALVSTPSYDPNLFVDGISSKDYS G LLNDPN R PL I NR 321
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 321 ATQGVYPPASTVKPYVAVSALSA N VITRNTSLFDPGWWQLPGS D KRYRDWKKWGHG H LNVTK A LEESADT Y FYQVAYDMG 400
Cdd:PRK10795 322 ATQGVYPPASTVKPYVAVSALSA G VITRNTSLFDPGWWQLPGS E KRYRDWKKWGHG R LNVTK S LEESADT F FYQVAYDMG 401
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 401 IDRLSEWM S KFGYGHYTGIDL S EERSGNMPTREWK L KRFKKPWYQGDTIPVGIGQGYWTATPIQM N KALM I LINDG L VKV 480
Cdd:PRK10795 402 IDRLSEWM G KFGYGHYTGIDL A EERSGNMPTREWK Q KRFKKPWYQGDTIPVGIGQGYWTATPIQM S KALM T LINDG I VKV 481
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 481 PHLL Q ST V EDGKQVPWVQPHEPPVGDIHSG F WEIAKDGM F GVANR G NGTAHKYFASAPYKIAAKSGTAQVFGLKANETYN 560
Cdd:PRK10795 482 PHLL M ST A EDGKQVPWVQPHEPPVGDIHSG Y WEIAKDGM Y GVANR P NGTAHKYFASAPYKIAAKSGTAQVFGLKANETYN 561
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 490997813 561 AH R IAERLRDHKLMTAFAPYNNPQVAVAIILENGGAGPAVGTIMRQILDHIMLGDNNT N LP S ENPAV T A G ED Q 633
Cdd:PRK10795 562 AH K IAERLRDHKLMTAFAPYNNPQVAVAIILENGGAGPAVGTIMRQILDHIMLGDNNT D LP A ENPAV A A A ED H 634
pbp2_mrdA
TIGR03423 penicillin-binding protein 2; Members of this protein family are penicillin-binding protein 2 ...
19-614
0e+00
penicillin-binding protein 2; Members of this protein family are penicillin-binding protein 2 (PBP-2), a protein whose gene (designated pbpA or mrdA) generally is found next to the gene for RodA, a protein required for rod (bacillus) shape in many bacteria. PBP-2 acts as a transpeptidase for cell elongation (hence, rod-shape). [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
Pssm-ID: 274573 [Multi-domain]
Cd Length: 592
Bit Score: 940.41
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 19 RRALV AFLGI L L L T G I L V A N L YNV Q IV R YTD Y Q T R S NE NRI K LVPIPP S RG I I Y DRNG TP LA L NR TIYQ LE MM PEKVD NV 98
Cdd:TIGR03423 1 RRALV LGGLV L A L F G V L A A R L FYL Q VI R GEE Y A T L S ED NRI R LVPIPP P RG L I L DRNG VL LA D NR PSFS LE IV PEKVD DL 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 99 QQ TLD A L RDVI DL TDD DIA N F K KE RS RS H RF TS IP V K VN L S E VQ VARFAVNQYR F PGVE VKGYKR RYYPY NSALT HV I GY 178
Cdd:TIGR03423 81 DA TLD R L AKLL DL DPE DIA R F L KE LK RS R RF EP IP L K SD L T E EE VARFAVNQYR L PGVE IEARLK RYYPY GELAA HV L GY 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 179 V SK IN DK D VD RL D kegk L ANYA STHD IGK L GIE R YYED V L H G QT GY E EVEVN N RGRVIR Q L KE VPP QA G R D IY LT L D LK L 258
Cdd:TIGR03423 161 V GE IN EE D LE RL E ---- P ANYA GGDY IGK S GIE K YYED E L R G KP GY R EVEVN A RGRVIR T L SR VPP VP G K D LV LT I D AR L 236
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 259 QQ YI E TL L A G S R A AVVV T DPRTG S ILA L VSTPS Y DPNLFVDGISSKDY S ALLNDP NT PL V NRA T QGVYPP A ST V KP Y VA V 338
Cdd:TIGR03423 237 QQ AA E KA L G G R R G AVVV M DPRTG E ILA M VSTPS F DPNLFVDGISSKDY K ALLNDP DR PL L NRA I QGVYPP G ST F KP V VA L 316
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 339 S AL SAN VIT RN T SLFD PG WW QL P G sd K R Y R D WK KW GHG HLNVT KA L EES A D T YFYQ V A YDM GID RLS E WMSK FG Y G HY TG 418
Cdd:TIGR03423 317 A AL EEG VIT PE T RIYC PG YF QL G G -- R R F R C WK RG GHG RVDLR KA I EES C D V YFYQ L A LRL GID KIA E YAKR FG F G QK TG 394
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 419 IDL SE E R SG NM P T REWK L KRF KK PWY Q GDT IP V G IGQGY WTA TP I Q MNK A LMI L I N D G LVKV PHL LQ S TVE - DG KQ V PWV 497
Cdd:TIGR03423 395 IDL PG E K SG LV P S REWK R KRF GQ PWY P GDT LN V S IGQGY VLV TP L Q LAV A TAA L A N G G KLYK PHL VK S IED p DG GV V RRT 474
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 498 Q P HEPPVGD I HSGFWEIAKD GM FG V A N RGN GTA HKYFASA PYK I A A K S GTAQV FG LK AN E T Y N A HR I A ERLRDH K L MT AF 577
Cdd:TIGR03423 475 E P EVLRPLP I SPENLDVVRE GM RD V V N GPG GTA RRARLGL PYK M A G K T GTAQV VS LK QG E K Y D A EQ I P ERLRDH A L FV AF 554
570 580 590
....*....|....*....|....*....|....*...
gi 490997813 578 APY N NP QV AVA I I L E N GG A G PAV - GT I M R Q I L D HIM LG 614
Cdd:TIGR03423 555 APY D NP KI AVA V I V E H GG G G SSA a AP I A R K I M D AYL LG 592
FtsI
COG0768 Cell division protein FtsI, peptidoglycan transpeptidase (Penicillin-binding protein 2) [Cell ...
11-610
0e+00
Cell division protein FtsI, peptidoglycan transpeptidase (Penicillin-binding protein 2) [Cell cycle control, cell division, chromosome partitioning, Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440531 [Multi-domain]
Cd Length: 568
Bit Score: 615.30
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 11 TA E SS LF V RR A L VA FL GI LLL TGI LV AN L YNV Q I V RYTD Y QTRSN ENRI KL VPIP PS RG I IYDRNG TP LA L N RTI Y Q L EM 90
Cdd:COG0768 4 KK E KR LF R RR L L LL FL LV LLL FLL LV GR L FYL Q V V EGDE Y AELAE ENRI RT VPIP AP RG L IYDRNG NV LA T N VPV Y S L YA 83
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 91 M PE K V DNVQQ T LDA L RDVID L TDDDIANFK K ER SR S hrft SIPV K V NLS EVQV AR fa VNQYRF PGV E V KGYKR RYYPY NS 170
Cdd:COG0768 84 D PE E V KDPEE T AEK L AKLLG L DPEELRKKL K KK SR F ---- PVYL K R NLS PEEA AR -- IRALKL PGV Y V EAEYK RYYPY GE 157
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 171 ALT HV I GYV SK IN DK D vdrldkegklanyasth D IGK L G I E RY YED V L H G QT G YEE VEV NN RGRVIR Q L - K E V PP QA G R D 249
Cdd:COG0768 158 LAA HV L GYV GE IN GG D ----------------- G IGK S G L E KA YED L L R G TP G KRR VEV DA RGRVIR D L g E E K PP VP G K D 220
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 250 IY LT L D LK LQ QYI E TL L AGS ------- RA AVVV T DP R TG S ILA LV S T PS Y DPNLFV D G isskdysallnd P NT PL V NRA T 322
Cdd:COG0768 221 LV LT I D SD LQ KIA E EA L KKA veeykak SG AVVV M DP K TG E ILA MA S Y PS F DPNLFV G G ------------ P DE PL R NRA V 288
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 323 QG V Y P P A ST V KP YV A VS AL SAN VIT RN T SLFD PG WWQLP G sd KRY RDW KKW GHG H L NV T K AL EE S ADTY FY QV A YDM GID 402
Cdd:COG0768 289 QG T Y E P G ST F KP FT A AA AL EEG VIT PD T TFDC PG YYRVG G -- RTI RDW DRG GHG T L TL T E AL AK S SNVG FY KL A LRL GID 366
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 403 R L SEWMS KFG Y G HY TGIDL SE E R SG NM P TR ewklkrfk K P WY Q G D T IPVG IGQG y WTA TP I Q MNK A LMILI N D G LVKV PH 482
Cdd:COG0768 367 K L YDYLK KFG L G QK TGIDL PG E A SG LL P SP -------- K R WY P G E T ATMS IGQG - LSV TP L Q LAQ A YAAIA N G G VLVK PH 437
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 483 L LQST V EDGKQ V PWVQ P HEP - P V gd I HSGFW E IAKD GM F GV A N RGN GTA HKY f A SAP Y KI A A K S GTAQV FGLKANET Y NA 561
Cdd:COG0768 438 L VKEI V DPDGE V VKEE P EVL r R V -- I SPETA E TVRE GM E GV V N EPG GTA RRA - A IPG Y RV A G K T GTAQV VDIGNGGY Y KG 514
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*..
gi 490997813 562 HR IA erlrdhk LMTA FAP YN NP QV AVA IIL EN G G -------- A G P AVGT IM RQI L DH 610
Cdd:COG0768 515 RH IA ------- SFVG FAP AD NP RY AVA VVV EN P G ggayggtv A A P VFRE IM EAY L RL 564
Transpeptidase
pfam00905 Penicillin binding protein transpeptidase domain; The active site serine (residue 337 in Swiss: ...
271-609
2.04e-86
Penicillin binding protein transpeptidase domain; The active site serine (residue 337 in Swiss:P14677) is conserved in all members of this family.
Pssm-ID: 425939 [Multi-domain]
Cd Length: 296
Bit Score: 271.60
E-value: 2.04e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 271 AAV VV T DP R TG SI LA L V ST PSYDPN L F vdgisskdysallndp NT PL V NRA TQGV Y P P A ST V KP YV A VS AL SAN V ITRNT 350
Cdd:pfam00905 1 GSA VV L DP K TG EV LA M V GK PSYDPN G F ---------------- IG PL R NRA VTSR Y E P G ST F KP FT A LA AL DNG V LKPDE 64
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 351 SL FD PGWW Q lp GSD K RYR DW KKWGH G HLNVTK ALE E S ADT Y FYQV A YDM G I D R L SEWMS KFGYG HY TGI D L SE E RS G NMP 430
Cdd:pfam00905 65 TI FD WPGK Q -- QGG K SIG DW NQDQV G IGTLRQ ALE Y S SNW Y MQKL A QKL G A D K L RSYLK KFGYG NK TGI G L PG E NA G YLT 142
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 431 TR ewklkrfkkp W YQ G D T IPV GIG qgy W T A TP I Q MNK A LMILI N D G LVKV PHL LQ S TVE dgkqvp W V Q P HEPPVGD I HSG 510
Cdd:pfam00905 143 PY ---------- W LE G A T ASF GIG --- L T I TP L Q QAQ A YAAIA N G G KLVP PHL VK S IED ------ K V D P KVLNKLP I SKS 203
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 511 FW E IA KD GMFG V A N R G N GT AH ky F A SAP YK I A A K S GTAQV F G L K ANET Y NAH riaerlr DHKLMTAF AP YN NP QV A V A II 590
Cdd:pfam00905 204 TA E KV KD MLRL V V N D G T GT GT -- A A VPG YK V A G K T GTAQV A G P K GGGY Y DGA ------- QIGWFVGY AP AD NP KY A F A VL 274
330 340
....*....|....*....|..
gi 490997813 591 LENGGA --- G PAVGT I MRQ IL D 609
Cdd:pfam00905 275 IDDPKR yyg G KVAAP I FKD IL E 296
PBP_dimer
pfam03717 Penicillin-binding Protein dimerization domain; This domain is found at the N terminus of ...
63-238
1.74e-52
Penicillin-binding Protein dimerization domain; This domain is found at the N terminus of Class B High Molecular Weight Penicillin-Binding Proteins. Its function has not been precisely defined, but is strongly implicated in PBP polymerization. The domain forms a largely disordered 'sugar tongs' structure.
Pssm-ID: 427460 [Multi-domain]
Cd Length: 178
Bit Score: 178.28
E-value: 1.74e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 63 PIP PS RG I IYDRNG TP LA L N RTI Y Q L EMM P E K VDNVQQTLD A ------ L RDVI DL T D D D IANFKKERSRSHRFTSIPV K V 136
Cdd:pfam03717 1 PIP AP RG E IYDRNG VV LA T N KPV Y S L TIT P S K LKKADALKT A lklakl L SNYE DL D D E D LTERFLKMNSYKSYYPVVI K K 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 137 NLSE VQ VAR FAV N QYRF PGV EVKGYKR RYYPY NSALT H VI GYV SK I NDKDVDRLDKE G klan Y ASTHDI GK L G I E RY YE D 216
Cdd:pfam03717 81 NLSE EE VAR IEE N LLEL PGV SIETDPV RYYPY GELAA H LL GYV GE I TEEELEKYLDK G ---- Y SRGDLV GK S G L E KQ YE S 156
170 180
....*....|....*....|..
gi 490997813 217 VL H G QT G YEE VEV NNR GRVIR Q 238
Cdd:pfam03717 157 VL R G KD G VRQ VEV DAL GRVIR E 178
PRK15105
PRK15105 peptidoglycan synthase FtsI; Provisional
64-608
1.15e-36
peptidoglycan synthase FtsI; Provisional
Pssm-ID: 185060 [Multi-domain]
Cd Length: 578
Bit Score: 144.96
E-value: 1.15e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 64 IPP SRG I I Y DR N G T PLA LNRTIYQLEMM P EK V - D NVQQTL D ---- AL R D VIDLTD D DIAN f KKERSRSH RF TSIPVK VN L 138
Cdd:PRK15105 66 VST SRG M I T DR S G R PLA VSVPVKAIWAD P KE V h D AGGISV D drwk AL A D ALNIPL D QLSA - RINANPKG RF IYLARQ VN P 144
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 139 S evq V A RF a VNQYRF PG VEVKGYK RRYYP YNSALT H V IG y VSKINDKDVD rldkegklanyasthdigkl G I E RYYEDV L 218
Cdd:PRK15105 145 D --- M A DY - IKKLKL PG IHLREES RRYYP SGEVTA H L IG - FTNVDSQGIE -------------------- G V E KSFDKW L 199
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 219 H GQ T G YEE V EVNNR GRVI RQLKEVPP QA GRDIY L TL D LK LQ QYIETL L -------- A G S RA AV V V t D PR TG SI LA LVST P 290
Cdd:PRK15105 200 T GQ P G ERI V RKDRY GRVI EDISSTDS QA AHNLA L SI D ER LQ ALVYRE L nnavafnk A E S GS AV L V - D VN TG EV LA MANS P 278
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 291 SY D PN lfvdgisskdys A L LND P NTPLV NRA TQG V YP P A STVKP Y V AVS AL SAN V ITR N TS L f DPGWWQLP G sd KRYR D W 370
Cdd:PRK15105 279 SY N PN ------------ N L SGT P KDAMR NRA ITD V FE P G STVKP M V VMT AL QRG V VKE N SV L - NTVPYRIN G -- HEIK D V 343
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 371 KKW gh GH L NV T KA L EE S ADTYFYQV A YD M GIDR L SEWM S K FG Y G HY T GID L SE ERSG NM P T rewklkrf K KP W YQGDTIP 450
Cdd:PRK15105 344 ARY -- SE L TL T GV L QK S SNVGVSKL A LA M PSSA L VDTY S R FG L G KA T NLG L VG ERSG LY P Q -------- K QR W SDIERAT 413
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 451 VGI G Q G Y w TA TP I Q MNKALMILIND G LVK v P hl L QS T VE D gkqvpwvqphe PPV GDIHSGFWE I AKD --- G M FG VA NR G N 527
Cdd:PRK15105 414 FSF G Y G L - MV TP L Q LARVYATIGSY G IYR - P -- L SI T KV D ----------- PPV PGERVFPES I VRT vvh M M ES VA LP G G 478
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 528 G TAHK yf A SAP Y K IA A K S GTA QVF G LKAN et Y NAHR IA erlrdhkl M TA - F AP YNN P QV A VAIILEN ------- GGA -- G 597
Cdd:PRK15105 479 G GVKA -- A IKG Y R IA I K T GTA KKV G PDGR -- Y INKY IA -------- Y TA g V AP ASQ P RF A LVVVIND pqagkyy GGA vs A 546
570
....*....|.
gi 490997813 598 P AV G T IM RQI L 608
Cdd:PRK15105 547 P VF G A IM GGV L 557
MrcB
COG0744 Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase [Cell wall ...
235-632
1.64e-22
Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440507 [Multi-domain]
Cd Length: 630
Bit Score: 101.92
E-value: 1.64e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 235 V I R Q L K E ----- VPPQA G RD IY L TLD L KLQ QYI E TLLA --------- G SR AA V VV T DP R TG SI LA L V STPS Y DPNL F vdg 300
Cdd:COG0744 277 V R R E L E E llged DLYRG G LK IY T TLD P KLQ KAA E KAVK nvlpegkpg G LQ AA L VV V DP K TG EV LA M V GGRD Y GKSQ F --- 353
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 301 isskdysallndpntplv NRATQ GVYP P A ST V KP Y V AVS AL SAN v I T RN T SL ------ F DP G W W QLPGS D K RY rdwkkwg 374
Cdd:COG0744 354 ------------------ NRATQ AKRQ P G ST F KP F V YAA AL EQG - Y T PA T TV ddepvt F PG G G W SPKNY D G RY ------- 407
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 375 H G HLNVTK AL EE S AD T YFYQV A YDM G I D RLSEWMSKF G yghytgidlseersgnmptrewklkr FKK P WYQGDTIPV G IG 454
Cdd:COG0744 408 R G PVTLRE AL AN S LN T PAVRL A QEV G L D KVVDTARRL G -------------------------- ITS P LDPNPSLAL G TS 461
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 455 qgyw TAT P IQ M NK A LMILI N D G LVKV PH LLQS - T VE DGK QVPWVQ P HEPP V GDIHSGF we IAK D GMFG V ANR G N G T A HKY 533
Cdd:COG0744 462 ---- EVS P LE M AS A YATFA N G G VYVE PH AITK v T DA DGK VLYEAK P KCEQ V ISPEVAY -- LMT D MLQD V VTS G T G R A ARL 535
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 534 fas APYKI A A K S GT AQVF glkanetynahriaerl RD hklm TA F AP Y n N PQ VAV A IILE N ---------- GG AG PA vg T I 603
Cdd:COG0744 536 --- PGRPV A G K T GT TNDN ----------------- RD ---- AW F VG Y - T PQ LVT A VWVG N ddnspmgyvt GG SL PA -- P I 588
410 420
....*....|....*....|....*....
gi 490997813 604 M R QILDHIML G DNNTNL P SENPA V TAG E D 632
Cdd:COG0744 589 W R DFMEAALE G LPVEDF P KPSGV V RID E P 617
PbpC
COG4953 Membrane carboxypeptidase/penicillin-binding protein PbpC [Cell wall/membrane/envelope ...
234-354
2.79e-05
Membrane carboxypeptidase/penicillin-binding protein PbpC [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443980 [Multi-domain]
Cd Length: 773
Bit Score: 47.13
E-value: 2.79e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490997813 234 R VI RQL kevp P QAG R d I YL TLD LK LQ QYI E T L LAG -- S R -------- AAV V V T D P RTG SI LA L V - S TPSY D PNLF -- VD G 300
Cdd:COG4953 263 R LL RQL ---- P GGT R - I RT TLD AG LQ RRL E R L VRR yv R R lkqngihn AAV L V V D N RTG EV LA Y V g S ADFF D ASRQ gq VD M 337
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 490997813 301 ISSK dysallndpntplvn R A tqgvyp P A ST V KP YVAVS AL SANV I TRN T S L F D 354
Cdd:COG4953 338 VRAL --------------- R S ------ P G ST L KP FLYGL AL DQGL I HPE T L L A D 370
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
