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Conserved domains on  [gi|490769819|ref|WP_004632048|]
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MULTISPECIES: DUF934 domain-containing protein [Ralstonia]

Protein Classification

DUF934 domain-containing protein( domain architecture ID 10007945)

DUF934 domain-containing protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
COG3749 COG3749
Uncharacterized conserved protein, DUF934 family [Function unknown];
1-173 1.45e-73

Uncharacterized conserved protein, DUF934 family [Function unknown];


:

Pssm-ID: 442963  Cd Length: 161  Bit Score: 218.17  E-value: 1.45e-73
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490769819   1 MSKIIKlqNGapQIVADEWTVLRTPEggeltqadVDAAAHAIVPLPYWEAHRDALLARARAgtLAVWLAPDDEPFALEAD 80
Cdd:COG3749    1 MPKLIK--DG--QIVDDDWTLLRDDE--------PLPEGKVIVPLARWLAERDALLARNGP--LGVWLAPDDDVEELAPD 66
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490769819  81 LPSLSLVAVDFPVFRDGRGYSTAFLLRQRLGFTRELRAIGDVLRDQLDFMRRCGFDAYAVRADKNIDDALNGFGEISVHY 160
Cdd:COG3749   67 LDRLALIAVDFPKFTDGRGYSQARLLRERYGYTGELRAVGDVLRDQLFYMLRCGFDAFELRADQDLEAALAALNDFSVAY 146
                        170
                 ....*....|...
gi 490769819 161 QGAIDEPRPLFRR 173
Cdd:COG3749  147 QPAVDEPRPLFRR 159
 
Name Accession Description Interval E-value
COG3749 COG3749
Uncharacterized conserved protein, DUF934 family [Function unknown];
1-173 1.45e-73

Uncharacterized conserved protein, DUF934 family [Function unknown];


Pssm-ID: 442963  Cd Length: 161  Bit Score: 218.17  E-value: 1.45e-73
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490769819   1 MSKIIKlqNGapQIVADEWTVLRTPEggeltqadVDAAAHAIVPLPYWEAHRDALLARARAgtLAVWLAPDDEPFALEAD 80
Cdd:COG3749    1 MPKLIK--DG--QIVDDDWTLLRDDE--------PLPEGKVIVPLARWLAERDALLARNGP--LGVWLAPDDDVEELAPD 66
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490769819  81 LPSLSLVAVDFPVFRDGRGYSTAFLLRQRLGFTRELRAIGDVLRDQLDFMRRCGFDAYAVRADKNIDDALNGFGEISVHY 160
Cdd:COG3749   67 LDRLALIAVDFPKFTDGRGYSQARLLRERYGYTGELRAVGDVLRDQLFYMLRCGFDAFELRADQDLEAALAALNDFSVAY 146
                        170
                 ....*....|...
gi 490769819 161 QGAIDEPRPLFRR 173
Cdd:COG3749  147 QPAVDEPRPLFRR 159
DUF934 pfam06073
Bacterial protein of unknown function (DUF934); This family consists of several bacterial ...
66-168 8.51e-54

Bacterial protein of unknown function (DUF934); This family consists of several bacterial proteins of unknown function, however members have been suggested to be an accessory protein for sulfite reduction. This is based on the observation that they strongly cofit with various genes in the sulfate assimilation pathway in various Pseudomonas as well as in Marinobacter adhaerens HP15 and C. basilensis 4G11 (see Supplementary note 5 in.)


Pssm-ID: 461820  Cd Length: 103  Bit Score: 166.16  E-value: 8.51e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490769819   66 VWLAPDDEPFALEADLPSLSLVAVDFPVFRDGRGYSTAFLLRQRLGFTRELRAIGDVLRDQLDFMRRCGFDAYAVRADKN 145
Cdd:pfam06073   1 VWLAPDEDPEELAPDLDRLALIALDFPKFRDGRGYSQARLLRERYGYKGELRATGDVLRDQLFFMLRCGFDAFALRADKD 80
                          90       100
                  ....*....|....*....|...
gi 490769819  146 IDDALNGFGEISVHYQGAIDEPR 168
Cdd:pfam06073  81 PEDALAALGRFSVFYQPAADGPQ 103
PRK06107 PRK06107
aspartate transaminase;
33-125 7.38e-03

aspartate transaminase;


Pssm-ID: 180403  Cd Length: 402  Bit Score: 36.25  E-value: 7.38e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490769819  33 ADVDAAAHAIVPLPYWEAHRDALLarARAGTLAVWLAPDDEPF-----ALEADL-PSLSLVAVDFPVFRDGRGYSTAfll 106
Cdd:PRK06107 112 ATLEAGDEVIIPAPYWVSYPDMVL--ANDGTPVIVACPEEQGFkltpeALEAAItPRTRWLILNAPSNPTGAVYSRA--- 186
                         90
                 ....*....|....*....
gi 490769819 107 rqrlgftrELRAIGDVLRD 125
Cdd:PRK06107 187 --------ELRALADVLLR 197
 
Name Accession Description Interval E-value
COG3749 COG3749
Uncharacterized conserved protein, DUF934 family [Function unknown];
1-173 1.45e-73

Uncharacterized conserved protein, DUF934 family [Function unknown];


Pssm-ID: 442963  Cd Length: 161  Bit Score: 218.17  E-value: 1.45e-73
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490769819   1 MSKIIKlqNGapQIVADEWTVLRTPEggeltqadVDAAAHAIVPLPYWEAHRDALLARARAgtLAVWLAPDDEPFALEAD 80
Cdd:COG3749    1 MPKLIK--DG--QIVDDDWTLLRDDE--------PLPEGKVIVPLARWLAERDALLARNGP--LGVWLAPDDDVEELAPD 66
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490769819  81 LPSLSLVAVDFPVFRDGRGYSTAFLLRQRLGFTRELRAIGDVLRDQLDFMRRCGFDAYAVRADKNIDDALNGFGEISVHY 160
Cdd:COG3749   67 LDRLALIAVDFPKFTDGRGYSQARLLRERYGYTGELRAVGDVLRDQLFYMLRCGFDAFELRADQDLEAALAALNDFSVAY 146
                        170
                 ....*....|...
gi 490769819 161 QGAIDEPRPLFRR 173
Cdd:COG3749  147 QPAVDEPRPLFRR 159
DUF934 pfam06073
Bacterial protein of unknown function (DUF934); This family consists of several bacterial ...
66-168 8.51e-54

Bacterial protein of unknown function (DUF934); This family consists of several bacterial proteins of unknown function, however members have been suggested to be an accessory protein for sulfite reduction. This is based on the observation that they strongly cofit with various genes in the sulfate assimilation pathway in various Pseudomonas as well as in Marinobacter adhaerens HP15 and C. basilensis 4G11 (see Supplementary note 5 in.)


Pssm-ID: 461820  Cd Length: 103  Bit Score: 166.16  E-value: 8.51e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490769819   66 VWLAPDDEPFALEADLPSLSLVAVDFPVFRDGRGYSTAFLLRQRLGFTRELRAIGDVLRDQLDFMRRCGFDAYAVRADKN 145
Cdd:pfam06073   1 VWLAPDEDPEELAPDLDRLALIALDFPKFRDGRGYSQARLLRERYGYKGELRATGDVLRDQLFFMLRCGFDAFALRADKD 80
                          90       100
                  ....*....|....*....|...
gi 490769819  146 IDDALNGFGEISVHYQGAIDEPR 168
Cdd:pfam06073  81 PEDALAALGRFSVFYQPAADGPQ 103
PRK06107 PRK06107
aspartate transaminase;
33-125 7.38e-03

aspartate transaminase;


Pssm-ID: 180403  Cd Length: 402  Bit Score: 36.25  E-value: 7.38e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490769819  33 ADVDAAAHAIVPLPYWEAHRDALLarARAGTLAVWLAPDDEPF-----ALEADL-PSLSLVAVDFPVFRDGRGYSTAfll 106
Cdd:PRK06107 112 ATLEAGDEVIIPAPYWVSYPDMVL--ANDGTPVIVACPEEQGFkltpeALEAAItPRTRWLILNAPSNPTGAVYSRA--- 186
                         90
                 ....*....|....*....
gi 490769819 107 rqrlgftrELRAIGDVLRD 125
Cdd:PRK06107 187 --------ELRALADVLLR 197
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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