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Conserved domains on  [gi|490288489|ref|WP_004184114|]
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MULTISPECIES: FAD-NAD(P)-binding protein [Klebsiella]

Protein Classification

FAD/NAD(P) binding domain-containing protein( domain architecture ID 10013368)

uncharacterized Rossmann-fold FAD/NAD(P) binding domain-containing protein similar to Escherichia coli YdhS

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK09897 PRK09897
FAD-NAD(P)-binding protein;
1-534 0e+00

FAD-NAD(P)-binding protein;


:

Pssm-ID: 182134 [Multi-domain]  Cd Length: 534  Bit Score: 1040.08  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490288489   1 MKRIAIVGVGPTGIYTFYELVKRGEPLAITLFEKEAQAGVGMPYSDDNTAAQMLANIASIEIPPIDLTYLQWLQQQSDDW 80
Cdd:PRK09897   1 MKKIAIVGAGPTGIYTFFSLLQQQTPLSISIFEQADEAGVGMPYSDEENSKMMLANIASIEIPPIYCTYLEWLQKQEDSH 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490288489  81 LAARGLERHALHERQFLPRVILGEYYRDRFLYLVERARDVGFVISVCESCEVTDIAVQPTGIAIHTDSAADPVIVDLVAI 160
Cdd:PRK09897  81 LQRYGVKKETLHDRQFLPRILLGEYFRDQFLRLVDQARQQKFAVAVYESCQVTDLQITNAGVMLATNQDLPSETFDLAVI 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490288489 161 ATGHLWPEEERASRQYFPSPWTGLMEARIAPCRVGILGTSLSAIDAAVAVVARHGVFHTEDDKTTHFSLHPGSEALEITL 240
Cdd:PRK09897 161 ATGHVWPDEEEATRTYFPSPWSGLMEAKVDACNVGIMGTSLSGLDAAMAVAIQHGSFIEDDKQHVVFHRDNASEKLNITL 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490288489 241 MSRHGVLPEADFYCPIPWEPLEIATPAALEAAIAEGSDALLDRIFELIVKELEYAAPDWSEAIGLRQLTPDSIADAWFAD 320
Cdd:PRK09897 241 MSRTGILPEADFYCPIPYEPLHIVTDQALNAEIAKGEEGLLDRVFRLIVEEIKFADPDWSQRIALESLNVDSFAQAWFAE 320

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490288489 321 RLTHDPFQWAQRNLQEVERNKREHHTVPWRYAILRLHEAIETVVPQFNDADSRRFRQGLARVFIDNYAAIPPESIRRLLA 400
Cdd:PRK09897 321 RKQRDPFDWAEKNLQEVERNKREKHTVPWRYVILRLHEAVQEIVPHLNEHDHKRFSKGLARVFIDNYAAIPSESIRRLLA 400

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490288489 401 LHRAGILRILTLGEDYELQREPDRTLIVHHRQRCEFDVFIDARGQKALKTRDLPFPSLRQQLLACGDDIPDVGDDYTLQA 480
Cdd:PRK09897 401 LREAGIIHILALGEDYEMEINESRTVIKTEDNSYSFDVFIDARGQRPLKVKDIPFPGLREQLQKTGDEIPDVGEDYTLQQ 480

                        490       500       510       520       530
                 ....*....|....*....|....*....|....*....|....*....|....
gi 490288489 481 PETVRGRVAFGALPWLMHDRPFVQGLTASAEIGSAMARAVSQQAAGRRRRLWYI 534
Cdd:PRK09897 481 PEDIRGRVAFGALPWLMHDQPFVQGLTACAEIGEAMARAVVKPASRARRRLSFD 534
 
Name Accession Description Interval E-value
PRK09897 PRK09897
FAD-NAD(P)-binding protein;
1-534 0e+00

FAD-NAD(P)-binding protein;


Pssm-ID: 182134 [Multi-domain]  Cd Length: 534  Bit Score: 1040.08  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490288489   1 MKRIAIVGVGPTGIYTFYELVKRGEPLAITLFEKEAQAGVGMPYSDDNTAAQMLANIASIEIPPIDLTYLQWLQQQSDDW 80
Cdd:PRK09897   1 MKKIAIVGAGPTGIYTFFSLLQQQTPLSISIFEQADEAGVGMPYSDEENSKMMLANIASIEIPPIYCTYLEWLQKQEDSH 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490288489  81 LAARGLERHALHERQFLPRVILGEYYRDRFLYLVERARDVGFVISVCESCEVTDIAVQPTGIAIHTDSAADPVIVDLVAI 160
Cdd:PRK09897  81 LQRYGVKKETLHDRQFLPRILLGEYFRDQFLRLVDQARQQKFAVAVYESCQVTDLQITNAGVMLATNQDLPSETFDLAVI 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490288489 161 ATGHLWPEEERASRQYFPSPWTGLMEARIAPCRVGILGTSLSAIDAAVAVVARHGVFHTEDDKTTHFSLHPGSEALEITL 240
Cdd:PRK09897 161 ATGHVWPDEEEATRTYFPSPWSGLMEAKVDACNVGIMGTSLSGLDAAMAVAIQHGSFIEDDKQHVVFHRDNASEKLNITL 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490288489 241 MSRHGVLPEADFYCPIPWEPLEIATPAALEAAIAEGSDALLDRIFELIVKELEYAAPDWSEAIGLRQLTPDSIADAWFAD 320
Cdd:PRK09897 241 MSRTGILPEADFYCPIPYEPLHIVTDQALNAEIAKGEEGLLDRVFRLIVEEIKFADPDWSQRIALESLNVDSFAQAWFAE 320

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490288489 321 RLTHDPFQWAQRNLQEVERNKREHHTVPWRYAILRLHEAIETVVPQFNDADSRRFRQGLARVFIDNYAAIPPESIRRLLA 400
Cdd:PRK09897 321 RKQRDPFDWAEKNLQEVERNKREKHTVPWRYVILRLHEAVQEIVPHLNEHDHKRFSKGLARVFIDNYAAIPSESIRRLLA 400

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490288489 401 LHRAGILRILTLGEDYELQREPDRTLIVHHRQRCEFDVFIDARGQKALKTRDLPFPSLRQQLLACGDDIPDVGDDYTLQA 480
Cdd:PRK09897 401 LREAGIIHILALGEDYEMEINESRTVIKTEDNSYSFDVFIDARGQRPLKVKDIPFPGLREQLQKTGDEIPDVGEDYTLQQ 480

                        490       500       510       520       530
                 ....*....|....*....|....*....|....*....|....*....|....
gi 490288489 481 PETVRGRVAFGALPWLMHDRPFVQGLTASAEIGSAMARAVSQQAAGRRRRLWYI 534
Cdd:PRK09897 481 PEDIRGRVAFGALPWLMHDQPFVQGLTACAEIGEAMARAVVKPASRARRRLSFD 534
YdhS COG4529
Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only];
2-527 8.53e-100

Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only];


Pssm-ID: 443597 [Multi-domain]  Cd Length: 466  Bit Score: 309.19  E-value: 8.53e-100
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490288489   2 KRIAIVGVGPTGIYTFYELVKRG-EPLAITLFEKEAQAGVGMPYSDDNtaAQMLANIASIEIPPID---LTYLQWLQQQS 77
Cdd:COG4529    6 KRIAIIGGGASGTALAIHLLRRApEPLRITLFEPRPELGRGVAYSTDS--PEHLLNVPAGRMSAFPddpDHFLRWLRENG 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490288489  78 DDWlaargleRHALHERQFLPRVILGEYYRDRFLYLVERARDvgFVISVCESCEVTDIAVQPTGIAIHTDSAAdPVIVDL 157
Cdd:COG4529   84 ARA-------APAIDPDAFVPRRLFGEYLRERLAEALARAPA--GVRLRHIRAEVVDLERDDGGYRVTLADGE-TLRADA 153

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490288489 158 VAIATGHLWPE----EERASRQYFPSPWTGLMEARIAP-CRVGILGTSLSAIDAAVAVVARHGVFHteddktthfslhpg 232
Cdd:COG4529  154 VVLATGHPPPApppgLAAGSPRYIADPWPPGALARIPPdARVLIIGTGLTAIDVVLSLAARGHRGP-------------- 219

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490288489 233 sealeITLMSRHGVLPEADFycPIPWEPLEIATPAALEAaiaegsdalldrifelivkeleyaapdwseaiglrqltpds 312
Cdd:COG4529  220 -----ITALSRRGLLPRAHP--PGAPLPLKFLTPEALEE----------------------------------------- 251

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490288489 313 iADAWFADRLTHDPFQWAQRNLQEVERNkrehhTVPWRYAILRLHEAIETVVPQFNDADSRRFRQGLARVFIDNYAAIPP 392
Cdd:COG4529  252 -LPLFFAARTARDLLRALRADLAEAEAG-----GVDWRAVIDALRPVLQALWAALSAEERRRFLRHLRPYWDVHRHRMPP 325

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490288489 393 ESIRRLLALHRAGILRILTlGEDYELQREPDRTLIVH--HRQRCEFDVFIDARGQKALKTR--DLPFPSLRQQLLACGDD 468
Cdd:COG4529  326 ESAARLLALIAAGRLEVLA-GRLEDIEAAEGGFVVTGagDGETLEVDVVINATGPEPDLRRdaDPLLRSLLARGLARPDP 404

                        490       500       510       520       530       540
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 490288489 469 IP---DVGDDYTLQ-APETVRGRVAFGAlPWLMHDRPFVQGLTASAEIGSAMARAVSQQAAGR 527
Cdd:COG4529  405 LGlglDVDPDGRVLdADGRASPRLFALG-PLARGTLWETTALPEIREQAAALARRLLASLAEA 466
NAD_binding_9 pfam13454
FAD-NAD(P)-binding;
5-165 4.26e-29

FAD-NAD(P)-binding;


Pssm-ID: 433222 [Multi-domain]  Cd Length: 155  Bit Score: 112.37  E-value: 4.26e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490288489    5 AIVGVGPTGIYTFYELVKR--GEPLAITLFEKeAQAGVGMPYSDDNtAAQMLANIASIEIPPI---DLTYLQWLQQQSDD 79
Cdd:pfam13454   1 AIVGGGPSGLALLERLLARapKRPLEITLFDP-SPPGAGGVYRTDQ-SPEHLLNVPASRMSLFpddPPHFLEWLRARGAL 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490288489   80 wlaargLERHALHERQFLPRVILGEYYRDRFLYLVERARDvGFVISVCEScEVTDIAVQPTGIAIHTDSAAdPVIVDLVA 159
Cdd:pfam13454  79 ------DEAPGLDPDDFPPRALYGRYLRDRFEEALARAPA-GVTVRVHRA-RVTDLRPRGDGYRVLLADGR-TLAADAVV 149


                  ....*.
gi 490288489  160 IATGHL 165
Cdd:pfam13454 150 LATGHG 155
 
Name Accession Description Interval E-value
PRK09897 PRK09897
FAD-NAD(P)-binding protein;
1-534 0e+00

FAD-NAD(P)-binding protein;


Pssm-ID: 182134 [Multi-domain]  Cd Length: 534  Bit Score: 1040.08  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490288489   1 MKRIAIVGVGPTGIYTFYELVKRGEPLAITLFEKEAQAGVGMPYSDDNTAAQMLANIASIEIPPIDLTYLQWLQQQSDDW 80
Cdd:PRK09897   1 MKKIAIVGAGPTGIYTFFSLLQQQTPLSISIFEQADEAGVGMPYSDEENSKMMLANIASIEIPPIYCTYLEWLQKQEDSH 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490288489  81 LAARGLERHALHERQFLPRVILGEYYRDRFLYLVERARDVGFVISVCESCEVTDIAVQPTGIAIHTDSAADPVIVDLVAI 160
Cdd:PRK09897  81 LQRYGVKKETLHDRQFLPRILLGEYFRDQFLRLVDQARQQKFAVAVYESCQVTDLQITNAGVMLATNQDLPSETFDLAVI 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490288489 161 ATGHLWPEEERASRQYFPSPWTGLMEARIAPCRVGILGTSLSAIDAAVAVVARHGVFHTEDDKTTHFSLHPGSEALEITL 240
Cdd:PRK09897 161 ATGHVWPDEEEATRTYFPSPWSGLMEAKVDACNVGIMGTSLSGLDAAMAVAIQHGSFIEDDKQHVVFHRDNASEKLNITL 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490288489 241 MSRHGVLPEADFYCPIPWEPLEIATPAALEAAIAEGSDALLDRIFELIVKELEYAAPDWSEAIGLRQLTPDSIADAWFAD 320
Cdd:PRK09897 241 MSRTGILPEADFYCPIPYEPLHIVTDQALNAEIAKGEEGLLDRVFRLIVEEIKFADPDWSQRIALESLNVDSFAQAWFAE 320

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490288489 321 RLTHDPFQWAQRNLQEVERNKREHHTVPWRYAILRLHEAIETVVPQFNDADSRRFRQGLARVFIDNYAAIPPESIRRLLA 400
Cdd:PRK09897 321 RKQRDPFDWAEKNLQEVERNKREKHTVPWRYVILRLHEAVQEIVPHLNEHDHKRFSKGLARVFIDNYAAIPSESIRRLLA 400

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490288489 401 LHRAGILRILTLGEDYELQREPDRTLIVHHRQRCEFDVFIDARGQKALKTRDLPFPSLRQQLLACGDDIPDVGDDYTLQA 480
Cdd:PRK09897 401 LREAGIIHILALGEDYEMEINESRTVIKTEDNSYSFDVFIDARGQRPLKVKDIPFPGLREQLQKTGDEIPDVGEDYTLQQ 480

                        490       500       510       520       530
                 ....*....|....*....|....*....|....*....|....*....|....
gi 490288489 481 PETVRGRVAFGALPWLMHDRPFVQGLTASAEIGSAMARAVSQQAAGRRRRLWYI 534
Cdd:PRK09897 481 PEDIRGRVAFGALPWLMHDQPFVQGLTACAEIGEAMARAVVKPASRARRRLSFD 534
YdhS COG4529
Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only];
2-527 8.53e-100

Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only];


Pssm-ID: 443597 [Multi-domain]  Cd Length: 466  Bit Score: 309.19  E-value: 8.53e-100
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490288489   2 KRIAIVGVGPTGIYTFYELVKRG-EPLAITLFEKEAQAGVGMPYSDDNtaAQMLANIASIEIPPID---LTYLQWLQQQS 77
Cdd:COG4529    6 KRIAIIGGGASGTALAIHLLRRApEPLRITLFEPRPELGRGVAYSTDS--PEHLLNVPAGRMSAFPddpDHFLRWLRENG 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490288489  78 DDWlaargleRHALHERQFLPRVILGEYYRDRFLYLVERARDvgFVISVCESCEVTDIAVQPTGIAIHTDSAAdPVIVDL 157
Cdd:COG4529   84 ARA-------APAIDPDAFVPRRLFGEYLRERLAEALARAPA--GVRLRHIRAEVVDLERDDGGYRVTLADGE-TLRADA 153

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490288489 158 VAIATGHLWPE----EERASRQYFPSPWTGLMEARIAP-CRVGILGTSLSAIDAAVAVVARHGVFHteddktthfslhpg 232
Cdd:COG4529  154 VVLATGHPPPApppgLAAGSPRYIADPWPPGALARIPPdARVLIIGTGLTAIDVVLSLAARGHRGP-------------- 219

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490288489 233 sealeITLMSRHGVLPEADFycPIPWEPLEIATPAALEAaiaegsdalldrifelivkeleyaapdwseaiglrqltpds 312
Cdd:COG4529  220 -----ITALSRRGLLPRAHP--PGAPLPLKFLTPEALEE----------------------------------------- 251

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490288489 313 iADAWFADRLTHDPFQWAQRNLQEVERNkrehhTVPWRYAILRLHEAIETVVPQFNDADSRRFRQGLARVFIDNYAAIPP 392
Cdd:COG4529  252 -LPLFFAARTARDLLRALRADLAEAEAG-----GVDWRAVIDALRPVLQALWAALSAEERRRFLRHLRPYWDVHRHRMPP 325

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490288489 393 ESIRRLLALHRAGILRILTlGEDYELQREPDRTLIVH--HRQRCEFDVFIDARGQKALKTR--DLPFPSLRQQLLACGDD 468
Cdd:COG4529  326 ESAARLLALIAAGRLEVLA-GRLEDIEAAEGGFVVTGagDGETLEVDVVINATGPEPDLRRdaDPLLRSLLARGLARPDP 404

                        490       500       510       520       530       540
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 490288489 469 IP---DVGDDYTLQ-APETVRGRVAFGAlPWLMHDRPFVQGLTASAEIGSAMARAVSQQAAGR 527
Cdd:COG4529  405 LGlglDVDPDGRVLdADGRASPRLFALG-PLARGTLWETTALPEIREQAAALARRLLASLAEA 466
NAD_binding_9 pfam13454
FAD-NAD(P)-binding;
5-165 4.26e-29

FAD-NAD(P)-binding;


Pssm-ID: 433222 [Multi-domain]  Cd Length: 155  Bit Score: 112.37  E-value: 4.26e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490288489    5 AIVGVGPTGIYTFYELVKR--GEPLAITLFEKeAQAGVGMPYSDDNtAAQMLANIASIEIPPI---DLTYLQWLQQQSDD 79
Cdd:pfam13454   1 AIVGGGPSGLALLERLLARapKRPLEITLFDP-SPPGAGGVYRTDQ-SPEHLLNVPASRMSLFpddPPHFLEWLRARGAL 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490288489   80 wlaargLERHALHERQFLPRVILGEYYRDRFLYLVERARDvGFVISVCEScEVTDIAVQPTGIAIHTDSAAdPVIVDLVA 159
Cdd:pfam13454  79 ------DEAPGLDPDDFPPRALYGRYLRDRFEEALARAPA-GVTVRVHRA-RVTDLRPRGDGYRVLLADGR-TLAADAVV 149


                  ....*.
gi 490288489  160 IATGHL 165
Cdd:pfam13454 150 LATGHG 155
HemY COG1232
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ...
 1-39 4.37e-04

Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis


Pssm-ID: 440845 [Multi-domain]  Cd Length: 443  Bit Score: 42.90  E-value: 4.37e-04
                         10        20        30
                 ....*....|....*....|....*....|....*....
gi 490288489   1 MKRIAIVGVGPTGIYTFYELVKRGepLAITLFEKEAQAG 39
Cdd:COG1232    1 MKRVAVIGGGIAGLTAAYRLAKAG--HEVTVLEASDRVG 37
PRK11883 PRK11883
protoporphyrinogen oxidase; Reviewed
 2-39 6.86e-04

protoporphyrinogen oxidase; Reviewed


Pssm-ID: 237009 [Multi-domain]  Cd Length: 451  Bit Score: 42.14  E-value: 6.86e-04
                         10        20        30
                 ....*....|....*....|....*....|....*...
gi 490288489   2 KRIAIVGVGPTGIYTFYELVKRGEPLAITLFEKEAQAG 39
Cdd:PRK11883   1 KKVAIIGGGITGLSAAYRLHKKGPDADITLLEASDRLG 38
PRK07233 PRK07233
hypothetical protein; Provisional
 3-42 1.52e-03

hypothetical protein; Provisional


Pssm-ID: 235977 [Multi-domain]  Cd Length: 434  Bit Score: 41.03  E-value: 1.52e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 490288489   3 RIAIVGVGPTGIYTFYELVKRGEPlaITLFEKEAQAGvGM 42
Cdd:PRK07233   1 KIAIVGGGIAGLAAAYRLAKRGHE--VTVFEADDQLG-GL 37
PRK12409 PRK12409
D-amino acid dehydrogenase small subunit; Provisional
 1-34 2.89e-03

D-amino acid dehydrogenase small subunit; Provisional


Pssm-ID: 237093 [Multi-domain]  Cd Length: 410  Bit Score: 40.01  E-value: 2.89e-03
                         10        20        30
                 ....*....|....*....|....*....|....
gi 490288489   1 MKRIAIVGVGPTGIYTFYELVKRGepLAITLFEK 34
Cdd:PRK12409   1 MSHIAVIGAGITGVTTAYALAQRG--YQVTVFDR 32
PRK12771 PRK12771
putative glutamate synthase (NADPH) small subunit; Provisional
 2-42 6.32e-03

putative glutamate synthase (NADPH) small subunit; Provisional


Pssm-ID: 237198 [Multi-domain]  Cd Length: 564  Bit Score: 39.09  E-value: 6.32e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|.
gi 490288489   2 KRIAIVGVGPTGIYTFYELVKRGEplAITLFEKEAQAGvGM 42
Cdd:PRK12771 138 KRVAVIGGGPAGLSAAYHLRRMGH--AVTIFEAGPKLG-GM 175
PRK12814 PRK12814
putative NADPH-dependent glutamate synthase small subunit; Provisional
 2-44 8.76e-03

putative NADPH-dependent glutamate synthase small subunit; Provisional


Pssm-ID: 139246 [Multi-domain]  Cd Length: 652  Bit Score: 38.94  E-value: 8.76e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|...
gi 490288489   2 KRIAIVGVGPTGIYTFYELVKRGEplAITLFEKEAQAGVGMPY 44
Cdd:PRK12814 194 KKVAIIGAGPAGLTAAYYLLRKGH--DVTIFDANEQAGGMMRY 234
GltD COG0493
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport ...
 2-42 8.94e-03

NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport and metabolism, General function prediction only]; NADPH-dependent glutamate synthase beta chain or related oxidoreductase is part of the Pathway/BioSystem: Glutamine biosynthesis


Pssm-ID: 440259 [Multi-domain]  Cd Length: 434  Bit Score: 38.58  E-value: 8.94e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|.
gi 490288489   2 KRIAIVGVGPTGIYTFYELVKRGepLAITLFEKEAQAGvGM 42
Cdd:COG0493  122 KKVAVVGSGPAGLAAAYQLARAG--HEVTVFEALDKPG-GL 159
PRK07208 PRK07208
hypothetical protein; Provisional
 1-39 9.91e-03

hypothetical protein; Provisional


Pssm-ID: 235967 [Multi-domain]  Cd Length: 479  Bit Score: 38.72  E-value: 9.91e-03
                         10        20        30
                 ....*....|....*....|....*....|....*....
gi 490288489   1 MKRIAIVGVGPTGIYTFYELVKRGEPlaITLFEKEAQAG 39
Cdd:PRK07208   4 KKSVVIIGAGPAGLTAAYELLKRGYP--VTVLEADPVVG 40
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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