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Conserved domains on  [gi|490252189|ref|WP_004150222|]
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MULTISPECIES: septal ring assembly protein ZapB [Klebsiella/Raoultella group]

Protein Classification

upstream stimulatory factor 2( domain architecture ID 10015110)

upstream stimulatory factor 2 (USF2) acts as transcription factor that binds to a symmetrical DNA sequence (E-boxes) (5'-CACGTG-3') that is found in a variety of viral and cellular promoters

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK15422 PRK15422
septal ring assembly protein ZapB; Provisional
 3-81 3.29e-26

septal ring assembly protein ZapB; Provisional


:

Pssm-ID: 185320 [Multi-domain]  Cd Length: 79  Bit Score: 91.68  E-value: 3.29e-26
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 490252189  3 MSLEVFEKLESKVQQAIDTITLLQMEIEELKEKNNTLVQEVQSAQHGREELERENSQLKEQQQGWQERLQALLGRMEEV 81
Cdd:PRK15422  1 MSLEVFEKLEAKVQQAIDTITLLQMEIEELKEKNNSLSQEVQNAQHQREELERENNHLKEQQNGWQERLQALLGRMEEV 79
 
Name Accession Description Interval E-value
PRK15422 PRK15422
septal ring assembly protein ZapB; Provisional
 3-81 3.29e-26

septal ring assembly protein ZapB; Provisional


Pssm-ID: 185320 [Multi-domain]  Cd Length: 79  Bit Score: 91.68  E-value: 3.29e-26
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 490252189  3 MSLEVFEKLESKVQQAIDTITLLQMEIEELKEKNNTLVQEVQSAQHGREELERENSQLKEQQQGWQERLQALLGRMEEV 81
Cdd:PRK15422  1 MSLEVFEKLEAKVQQAIDTITLLQMEIEELKEKNNSLSQEVQNAQHQREELERENNHLKEQQNGWQERLQALLGRMEEV 79
ZapB COG3074
Cell division protein ZapB, interacts with FtsZ [Cell cycle control, cell division, chromosome ...
 3-81 2.84e-18

Cell division protein ZapB, interacts with FtsZ [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 442308 [Multi-domain]  Cd Length: 79  Bit Score: 71.54  E-value: 2.84e-18
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 490252189  3 MSLEVFEKLESKVQQAIDTITLLQMEIEELKEKNNTLVQEVQSAQHGREELERENSQLKEQQQGWQERLQALLGRMEEV 81
Cdd:COG3074   1 MSLELLEELEAKVQQAVDTIELLQMEVEELKEKNEELEQENEELQSENEELQSENEQLKTENAEWQERIRSLLGKIDEV 79
ZapB pfam06005
Cell division protein ZapB; ZapB is a non-essential, abundant cell division factor that is ...
 3-80 4.71e-13

Cell division protein ZapB; ZapB is a non-essential, abundant cell division factor that is required for proper Z-ring formation.


Pssm-ID: 428718 [Multi-domain]  Cd Length: 71  Bit Score: 58.05  E-value: 4.71e-13
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 490252189   3 MSLEVFEKLESKVQQAIDTITLLQMEIEELKEKNNTLVQEvqsaqhgREELERENSQLKEQQQGWQERLQALLGRMEE 80
Cdd:pfam06005  1 MSLELLEQLETKIQAAVDTIALLQMENEELKEENEELKEE-------ANELEEENQQLKQERNQWQERIRGLLGKLDE 71
 
Name Accession Description Interval E-value
PRK15422 PRK15422
septal ring assembly protein ZapB; Provisional
 3-81 3.29e-26

septal ring assembly protein ZapB; Provisional


Pssm-ID: 185320 [Multi-domain]  Cd Length: 79  Bit Score: 91.68  E-value: 3.29e-26
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 490252189  3 MSLEVFEKLESKVQQAIDTITLLQMEIEELKEKNNTLVQEVQSAQHGREELERENSQLKEQQQGWQERLQALLGRMEEV 81
Cdd:PRK15422  1 MSLEVFEKLEAKVQQAIDTITLLQMEIEELKEKNNSLSQEVQNAQHQREELERENNHLKEQQNGWQERLQALLGRMEEV 79
ZapB COG3074
Cell division protein ZapB, interacts with FtsZ [Cell cycle control, cell division, chromosome ...
 3-81 2.84e-18

Cell division protein ZapB, interacts with FtsZ [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 442308 [Multi-domain]  Cd Length: 79  Bit Score: 71.54  E-value: 2.84e-18
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 490252189  3 MSLEVFEKLESKVQQAIDTITLLQMEIEELKEKNNTLVQEVQSAQHGREELERENSQLKEQQQGWQERLQALLGRMEEV 81
Cdd:COG3074   1 MSLELLEELEAKVQQAVDTIELLQMEVEELKEKNEELEQENEELQSENEELQSENEQLKTENAEWQERIRSLLGKIDEV 79
ZapB pfam06005
Cell division protein ZapB; ZapB is a non-essential, abundant cell division factor that is ...
 3-80 4.71e-13

Cell division protein ZapB; ZapB is a non-essential, abundant cell division factor that is required for proper Z-ring formation.


Pssm-ID: 428718 [Multi-domain]  Cd Length: 71  Bit Score: 58.05  E-value: 4.71e-13
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 490252189   3 MSLEVFEKLESKVQQAIDTITLLQMEIEELKEKNNTLVQEvqsaqhgREELERENSQLKEQQQGWQERLQALLGRMEE 80
Cdd:pfam06005  1 MSLELLEQLETKIQAAVDTIALLQMENEELKEENEELKEE-------ANELEEENQQLKQERNQWQERIRGLLGKLDE 71
PRK13922 PRK13922
rod shape-determining protein MreC; Provisional
 7-63 1.34e-03

rod shape-determining protein MreC; Provisional


Pssm-ID: 237560  Cd Length: 276  Bit Score: 35.34  E-value: 1.34e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 490252189   7 VFEKLESKVQQAIDtITLLQMEIEELKEKNNTLVQEVQSAQhgreELERENSQLKEQ 63
Cdd:PRK13922  57 PREFVSGVFESLAS-LFDLREENEELKKELLELESRLQELE----QLEAENARLREL 108
PRK11281 PRK11281
mechanosensitive channel MscK;
9-71 5.43e-03

mechanosensitive channel MscK;


Pssm-ID: 236892 [Multi-domain]  Cd Length: 1113  Bit Score: 33.73  E-value: 5.43e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 490252189    9 EKLESKVQQAIDTITLLQMEIEELKEKNNTLVQEvQSAQHGREELERENSQLKEQQQGWQERL 71
Cdd:PRK11281   83 EQLKQQLAQAPAKLRQAQAELEALKDDNDEETRE-TLSTLSLRQLESRLAQTLDQLQNAQNDL 144
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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