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Conserved domains on  [gi|490247372|ref|WP_004145519|]
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MULTISPECIES: YoaH family protein [Gammaproteobacteria]

Protein Classification

YoaH family protein( domain architecture ID 10006959)

YoaH family protein similar to Yersinia pseudotuberculosis UPF0181 protein YPTS_1774

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
yoaH COG3140
Uncharacterized conserved protein YoaH, UPF0181 family [Function unknown];
1-58 2.76e-28

Uncharacterized conserved protein YoaH, UPF0181 family [Function unknown];


:

Pssm-ID: 442374  Cd Length: 58  Bit Score: 95.02  E-value: 2.76e-28
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 490247372  1 MFAGLPSLSHEQQQKAVERIHELMAQGISSGQAIALVAEELRATHTGEQIVARFEDED 58
Cdd:COG3140   1 MFNGLPALTHEQQQQAVERIQQLMAQGMSSGEAIALVAQEIREEHQGEQVVVRFDDED 58
 
Name Accession Description Interval E-value
yoaH COG3140
Uncharacterized conserved protein YoaH, UPF0181 family [Function unknown];
1-58 2.76e-28

Uncharacterized conserved protein YoaH, UPF0181 family [Function unknown];


Pssm-ID: 442374  Cd Length: 58  Bit Score: 95.02  E-value: 2.76e-28
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 490247372  1 MFAGLPSLSHEQQQKAVERIHELMAQGISSGQAIALVAEELRATHTGEQIVARFEDED 58
Cdd:COG3140   1 MFNGLPALTHEQQQQAVERIQQLMAQGMSSGEAIALVAQEIREEHQGEQVVVRFDDED 58
PRK05114 PRK05114
YoaH family protein;
1-59 1.91e-26

YoaH family protein;


Pssm-ID: 179941  Cd Length: 59  Bit Score: 90.47  E-value: 1.91e-26
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*....
gi 490247372  1 MFAGLPSLSHEQQQKAVERIHELMAQGISSGQAIALVAEELRATHTGEQIVARFEDEDE 59
Cdd:PRK05114  1 MFAGLPSLTHEQQQKAVERIQELMAQGMSSGEAIALVAEELRANHQGERIVARFEDEDE 59
UPF0181 pfam03701
Uncharacterized protein family (UPF0181); This family contains small proteins of about 50 ...
 1-49 9.94e-21

Uncharacterized protein family (UPF0181); This family contains small proteins of about 50 amino acids of unknown function. The family includes YoaH.


Pssm-ID: 427449  Cd Length: 50  Bit Score: 75.83  E-value: 9.94e-21
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*....
gi 490247372   1 MFAGLPSLSHEQQQKAVERIHELMAQGISSGQAIALVAEELRATHTGEQ 49
Cdd:pfam03701  1 MLDGLPSLTHEQQQQAVERIQQLMAQGMSSGEAIAIVAQELREEHQGKE 49
 
Name Accession Description Interval E-value
yoaH COG3140
Uncharacterized conserved protein YoaH, UPF0181 family [Function unknown];
1-58 2.76e-28

Uncharacterized conserved protein YoaH, UPF0181 family [Function unknown];


Pssm-ID: 442374  Cd Length: 58  Bit Score: 95.02  E-value: 2.76e-28
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 490247372  1 MFAGLPSLSHEQQQKAVERIHELMAQGISSGQAIALVAEELRATHTGEQIVARFEDED 58
Cdd:COG3140   1 MFNGLPALTHEQQQQAVERIQQLMAQGMSSGEAIALVAQEIREEHQGEQVVVRFDDED 58
PRK05114 PRK05114
YoaH family protein;
1-59 1.91e-26

YoaH family protein;


Pssm-ID: 179941  Cd Length: 59  Bit Score: 90.47  E-value: 1.91e-26
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*....
gi 490247372  1 MFAGLPSLSHEQQQKAVERIHELMAQGISSGQAIALVAEELRATHTGEQIVARFEDEDE 59
Cdd:PRK05114  1 MFAGLPSLTHEQQQKAVERIQELMAQGMSSGEAIALVAEELRANHQGERIVARFEDEDE 59
UPF0181 pfam03701
Uncharacterized protein family (UPF0181); This family contains small proteins of about 50 ...
 1-49 9.94e-21

Uncharacterized protein family (UPF0181); This family contains small proteins of about 50 amino acids of unknown function. The family includes YoaH.


Pssm-ID: 427449  Cd Length: 50  Bit Score: 75.83  E-value: 9.94e-21
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*....
gi 490247372   1 MFAGLPSLSHEQQQKAVERIHELMAQGISSGQAIALVAEELRATHTGEQ 49
Cdd:pfam03701  1 MLDGLPSLTHEQQQQAVERIQQLMAQGMSSGEAIAIVAQELREEHQGKE 49
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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