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Conserved domains on  [gi|490210092|ref|WP_004108494|]
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MULTISPECIES: DUF2501 domain-containing protein [Klebsiella]

Protein Classification

DUF2501 domain-containing protein( domain architecture ID 10013858)

uncharacterized DUF2501 domain-containing protein similar to Escherichia coli YjjA, which is found in an operon next to DnaC, a protein required for the initiation of chromosome replication

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK11667 PRK11667
hypothetical protein; Provisional
 1-163 1.77e-59

hypothetical protein; Provisional


:

Pssm-ID: 236951  Cd Length: 163  Bit Score: 182.19  E-value: 1.77e-59
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490210092   1 MKSAKTLFRTAIVAGALFTFGAHATSWQDSLSSAANQLSSQNGSQQSGGMSLSSLTGLLNGGNQSLTSSSMNNAAGIMSY 80
Cdd:PRK11667   2 MKTIKHLLCCAILAAALISTGAHAASLGDSLSSAASQLGGQAGSSQQGGWSLSSLTGLLSGGGQALSAGSMNNAAGILQY 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490210092  81 CAKQKLASVTNTENIKNQVLDKLGLSTPEkQKEDTSYLEGLQGLLTSKDGQQLNLNNLGSSPLAEKVKTKACDLVLKQGV 160
Cdd:PRK11667  82 CAKNNYLSATGAESVKDQLLGKLGLGSTE-QKSDTNYLSGLQGLLKTGDGQQLNLSNIGTTPLKEKVKTKACDLVLKQGK 160


                 ...
gi 490210092 161 SFL 163
Cdd:PRK11667 161 SFL 163
 
Name Accession Description Interval E-value
PRK11667 PRK11667
hypothetical protein; Provisional
 1-163 1.77e-59

hypothetical protein; Provisional


Pssm-ID: 236951  Cd Length: 163  Bit Score: 182.19  E-value: 1.77e-59
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490210092   1 MKSAKTLFRTAIVAGALFTFGAHATSWQDSLSSAANQLSSQNGSQQSGGMSLSSLTGLLNGGNQSLTSSSMNNAAGIMSY 80
Cdd:PRK11667   2 MKTIKHLLCCAILAAALISTGAHAASLGDSLSSAASQLGGQAGSSQQGGWSLSSLTGLLSGGGQALSAGSMNNAAGILQY 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490210092  81 CAKQKLASVTNTENIKNQVLDKLGLSTPEkQKEDTSYLEGLQGLLTSKDGQQLNLNNLGSSPLAEKVKTKACDLVLKQGV 160
Cdd:PRK11667  82 CAKNNYLSATGAESVKDQLLGKLGLGSTE-QKSDTNYLSGLQGLLKTGDGQQLNLSNIGTTPLKEKVKTKACDLVLKQGK 160


                 ...
gi 490210092 161 SFL 163
Cdd:PRK11667 161 SFL 163
DUF2501 pfam10696
Protein of unknown function (DUF2501); Members of this family are all Proteobacteria. Several ...
 83-161 6.29e-20

Protein of unknown function (DUF2501); Members of this family are all Proteobacteria. Several are annotated as being YjjA or YjjA-like, but this protein is uncharacterized.


Pssm-ID: 431442  Cd Length: 77  Bit Score: 78.56  E-value: 6.29e-20
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 490210092   83 KQKLASVTNTENIKNQVLDKLGLSTPEKQKeDTSYLEGLQGLLTSKDGQQLNLNNLGSSpLAEKVKTKACDLVLKQGVS 161
Cdd:pfam10696   1 KNNYLSADGASSVKDQLLGKLGLGTQEQQK-DSDYQNGLQGLLKTGNGQQFNLSNLGTT-LKEKVKTKACDLVLKQAKS 77
 
Name Accession Description Interval E-value
PRK11667 PRK11667
hypothetical protein; Provisional
 1-163 1.77e-59

hypothetical protein; Provisional


Pssm-ID: 236951  Cd Length: 163  Bit Score: 182.19  E-value: 1.77e-59
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490210092   1 MKSAKTLFRTAIVAGALFTFGAHATSWQDSLSSAANQLSSQNGSQQSGGMSLSSLTGLLNGGNQSLTSSSMNNAAGIMSY 80
Cdd:PRK11667   2 MKTIKHLLCCAILAAALISTGAHAASLGDSLSSAASQLGGQAGSSQQGGWSLSSLTGLLSGGGQALSAGSMNNAAGILQY 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490210092  81 CAKQKLASVTNTENIKNQVLDKLGLSTPEkQKEDTSYLEGLQGLLTSKDGQQLNLNNLGSSPLAEKVKTKACDLVLKQGV 160
Cdd:PRK11667  82 CAKNNYLSATGAESVKDQLLGKLGLGSTE-QKSDTNYLSGLQGLLKTGDGQQLNLSNIGTTPLKEKVKTKACDLVLKQGK 160


                 ...
gi 490210092 161 SFL 163
Cdd:PRK11667 161 SFL 163
DUF2501 pfam10696
Protein of unknown function (DUF2501); Members of this family are all Proteobacteria. Several ...
 83-161 6.29e-20

Protein of unknown function (DUF2501); Members of this family are all Proteobacteria. Several are annotated as being YjjA or YjjA-like, but this protein is uncharacterized.


Pssm-ID: 431442  Cd Length: 77  Bit Score: 78.56  E-value: 6.29e-20
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 490210092   83 KQKLASVTNTENIKNQVLDKLGLSTPEKQKeDTSYLEGLQGLLTSKDGQQLNLNNLGSSpLAEKVKTKACDLVLKQGVS 161
Cdd:pfam10696   1 KNNYLSADGASSVKDQLLGKLGLGTQEQQK-DSDYQNGLQGLLKTGNGQQFNLSNLGTT-LKEKVKTKACDLVLKQAKS 77
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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