|
Name |
Accession |
Description |
Interval |
E-value |
| PRK15100 |
PRK15100 |
cystine ABC transporter permease; |
1-220 |
9.40e-146 |
|
cystine ABC transporter permease;
Pssm-ID: 185055 [Multi-domain] Cd Length: 220 Bit Score: 404.90 E-value: 9.40e-146
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490205021 1 MQESIQLVIDSAPFLLKGAVFTLQLSIGGMFFGLVLGFILALMRMSPVWPIKWLARMYISIFRGTPLIAQLFMIYYGLPQ 80
Cdd:PRK15100 1 MQESIQLVIDSAPFLLKGAGYTLQLSIGGMFFGLLLGFILALMRLSPIWPVRWLARFYVSIFRGTPLIAQLFMIYYGLPQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490205021 81 FGIELDPIPAAMIGLSLNTAAYAAETLRAAIASIDKGQWEAAASIGMTRWQAMRRAILPQAARVALPPLSNSFISLVKDT 160
Cdd:PRK15100 81 FGIELDPIPAAMIGLSLNTAAYAAETLRAAISSIDKGQWEAAASIGMTRWQTLRRAILPQAARTALPPLSNSFISLVKDT 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 490205021 161 SLAATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWVMATVLSTLQNYFENQLNRQERD 220
Cdd:PRK15100 161 SLAATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWIMATVLSALQNRFENQLNRQERE 220
|
|
| HisM |
COG0765 |
ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]; ... |
1-216 |
1.77e-97 |
|
ABC-type amino acid transport system, permease component [Amino acid transport and metabolism];
Pssm-ID: 440528 [Multi-domain] Cd Length: 218 Bit Score: 282.73 E-value: 1.77e-97
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490205021 1 MQESIQLVIDSAPFLLKGAVFTLQLSIGGMFFGLVLGFILALMRMSPVWPIKWLARMYISIFRGTPLIAQLFMIYYGLPQ 80
Cdd:COG0765 1 MFFDFSVLLDYLPLLLEGLLVTLLLTVLAIVLGLVLGLLLALARLSPNPVLRWLATAYVEFFRGTPLLVQLFFIYFGLPL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490205021 81 FGIELDPIPAAMIGLSLNTAAYAAETLRAAIASIDKGQWEAAASIGMTRWQAMRRAILPQAARVALPPLSNSFISLVKDT 160
Cdd:COG0765 81 LGIDLSPFVAAVIALTLNSAAYLAEIVRAGIQSVPKGQWEAARALGLSRWQTMRRIILPQALRIILPPLGNEFISLLKDT 160
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 490205021 161 SLAATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWVMATVLSTLQNYFENQLNR 216
Cdd:COG0765 161 SLVSVIGVPELTRAAQQIASRTFRPFEVYLVAALIYLVLTLPLSLLARRLERRLAR 216
|
|
| ectoine_ehuC |
TIGR03004 |
ectoine/hydroxyectoine ABC transporter, permease protein EhuC; Members of this family are ... |
13-216 |
8.66e-47 |
|
ectoine/hydroxyectoine ABC transporter, permease protein EhuC; Members of this family are presumed to act as permease subunits of ectoine ABC transporters. Operons containing this gene also contain the other genes of the ABC transporter and typically are found next to either ectoine utilization or ectoine biosynthesis operons. Permease subunits EhuC and EhuD are homologous.
Pssm-ID: 132049 [Multi-domain] Cd Length: 214 Bit Score: 153.85 E-value: 8.66e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490205021 13 PFLLKGAVFTLQLSIGGMFFGLVLGFILALMRMSPVWPIKWLARMYISIFRGTPLIAQLFMIYYGLPQFGIELDPIPAAM 92
Cdd:TIGR03004 5 PLLLQGAWVTMQITLAGSVLATVLAFFAGLGRVSGGPILRTVALCYIEVFRGTSLLVQLFWFYFVLPLIGLSLDPVTTGV 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490205021 93 IGLSLNTAAYAAETLRAAIASIDKGQWEAAASIGMTRWQAMRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELF 172
Cdd:TIGR03004 85 MVLGLHAGAYGAEIVRGALSSVSVQQLEACRALNFTRFQTLRRISLPQALVEMMPAFGNLAIELLKLTSLVSLISLADLT 164
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 490205021 173 RQAQLITSRTLEVFTMYLAASLIYWVMATVLSTLQNYFENQLNR 216
Cdd:TIGR03004 165 FAAQSIRNLTLDTLSIFAITLLCYFVMALIIMLIMRVLERVVRR 208
|
|
| TM_PBP2 |
cd06261 |
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ... |
22-204 |
2.43e-24 |
|
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.
Pssm-ID: 119394 [Multi-domain] Cd Length: 190 Bit Score: 95.04 E-value: 2.43e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490205021 22 TLQLSIGGMFFGLVLGFILALMRMSPVWPIKWLARMYISIFRGTPLIAQLFMIYYGLPQFG---IELDPIPAAMIGLSLN 98
Cdd:cd06261 4 TLLLALIATLLALVLGLLLGIILARKRGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLLgwgILPGLGLPALILALLL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490205021 99 TAAYAAETLRAAIASIDKGQWEAAASIGMTRWQAMRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLI 178
Cdd:cd06261 84 IAPFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLGGGEAPGPGTGL 163
|
170 180
....*....|....*....|....*.
gi 490205021 179 TSRTLEVFTMYLAASLIYWVMATVLS 204
Cdd:cd06261 164 LLIFAILFPGDLGVAAAVALILLLLS 189
|
|
| BPD_transp_1 |
pfam00528 |
Binding-protein-dependent transport system inner membrane component; The alignments cover the ... |
33-211 |
3.55e-16 |
|
Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.
Pssm-ID: 334128 [Multi-domain] Cd Length: 183 Bit Score: 73.49 E-value: 3.55e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490205021 33 GLVLGFILALMRMSPVwpiKWLARMYISIFRGTPLIAQLFMIYYgLPQFGIELDPIPAAMIGLSLNTAAYAAETLRAAIA 112
Cdd:pfam00528 1 GIPLGIIAALRRGRRL---DRLLRPLIDLLQALPSFVLAILLVV-IAILSILGHGILPAIILALLGWAGYARLIRRAALR 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490205021 113 SIDKGQWEAAASIGMTRWQAMRRAILPQAARVALPPLSNSFISLVKDTSLAATI----QVPELFRQAQLItSRTLEVFTM 188
Cdd:pfam00528 77 SLPSDLVEAARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLEFLgswpGLGLLLIEAILG-YDYPEIQGP 155
|
170 180
....*....|....*....|...
gi 490205021 189 YLAASLIYWVMATVLSTLQNYFE 211
Cdd:pfam00528 156 VLAAALILLLLNLLVDILQRLLD 178
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PRK15100 |
PRK15100 |
cystine ABC transporter permease; |
1-220 |
9.40e-146 |
|
cystine ABC transporter permease;
Pssm-ID: 185055 [Multi-domain] Cd Length: 220 Bit Score: 404.90 E-value: 9.40e-146
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490205021 1 MQESIQLVIDSAPFLLKGAVFTLQLSIGGMFFGLVLGFILALMRMSPVWPIKWLARMYISIFRGTPLIAQLFMIYYGLPQ 80
Cdd:PRK15100 1 MQESIQLVIDSAPFLLKGAGYTLQLSIGGMFFGLLLGFILALMRLSPIWPVRWLARFYVSIFRGTPLIAQLFMIYYGLPQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490205021 81 FGIELDPIPAAMIGLSLNTAAYAAETLRAAIASIDKGQWEAAASIGMTRWQAMRRAILPQAARVALPPLSNSFISLVKDT 160
Cdd:PRK15100 81 FGIELDPIPAAMIGLSLNTAAYAAETLRAAISSIDKGQWEAAASIGMTRWQTLRRAILPQAARTALPPLSNSFISLVKDT 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 490205021 161 SLAATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWVMATVLSTLQNYFENQLNRQERD 220
Cdd:PRK15100 161 SLAATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWIMATVLSALQNRFENQLNRQERE 220
|
|
| HisM |
COG0765 |
ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]; ... |
1-216 |
1.77e-97 |
|
ABC-type amino acid transport system, permease component [Amino acid transport and metabolism];
Pssm-ID: 440528 [Multi-domain] Cd Length: 218 Bit Score: 282.73 E-value: 1.77e-97
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490205021 1 MQESIQLVIDSAPFLLKGAVFTLQLSIGGMFFGLVLGFILALMRMSPVWPIKWLARMYISIFRGTPLIAQLFMIYYGLPQ 80
Cdd:COG0765 1 MFFDFSVLLDYLPLLLEGLLVTLLLTVLAIVLGLVLGLLLALARLSPNPVLRWLATAYVEFFRGTPLLVQLFFIYFGLPL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490205021 81 FGIELDPIPAAMIGLSLNTAAYAAETLRAAIASIDKGQWEAAASIGMTRWQAMRRAILPQAARVALPPLSNSFISLVKDT 160
Cdd:COG0765 81 LGIDLSPFVAAVIALTLNSAAYLAEIVRAGIQSVPKGQWEAARALGLSRWQTMRRIILPQALRIILPPLGNEFISLLKDT 160
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 490205021 161 SLAATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWVMATVLSTLQNYFENQLNR 216
Cdd:COG0765 161 SLVSVIGVPELTRAAQQIASRTFRPFEVYLVAALIYLVLTLPLSLLARRLERRLAR 216
|
|
| ArtM |
COG4160 |
ABC-type arginine/histidine transport system, permease component [Amino acid transport and ... |
4-219 |
1.43e-74 |
|
ABC-type arginine/histidine transport system, permease component [Amino acid transport and metabolism];
Pssm-ID: 443325 [Multi-domain] Cd Length: 229 Bit Score: 224.97 E-value: 1.43e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490205021 4 SIQLVIDSAPFLLKGAVFTLQLSIGGMFFGLVLGFILALMRMSPVWPIKWLARMYISIFRGTPLIAQLFMIYYGLPQFG- 82
Cdd:COG4160 2 DLDLLFEYLPLLLSGLPLTLQLLALSLLLGFLLAVPLALARASGNRLLRWPARGYIYVFRGTPLLVQLFLIYYGLGQFEw 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490205021 83 --------IELDPIPAAMIGLSLNTAAYAAETLRAAIASIDKGQWEAAASIGMTRWQAMRRAILPQAARVALPPLSNSFI 154
Cdd:COG4160 82 vreswlwpLLRDPWFCALLALTLNTAAYTAEIFRGAIRAVPKGEIEAARALGMSRWQTFRRIILPSALRRALPAYSNEVI 161
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 490205021 155 SLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWVMATVLSTLQNYFENQLNRQER 219
Cdd:COG4160 162 LMLKATALASTITVMDLTGVARRIYSRTYDPFEPFLIAALIYLVITFLLTRLFRLLERRLLRHLR 226
|
|
| ArtQ |
COG4215 |
ABC-type arginine transport system, permease component [Amino acid transport and metabolism]; |
15-219 |
3.79e-62 |
|
ABC-type arginine transport system, permease component [Amino acid transport and metabolism];
Pssm-ID: 443361 [Multi-domain] Cd Length: 238 Bit Score: 193.80 E-value: 3.79e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490205021 15 LLKGAVFTLQLSIGGMFFGLVLGFILALMRMSPVWPIKWLARMYISIFRGTPLIAQLFMIYYGLPQ------------FG 82
Cdd:COG4215 18 LLAGALVTLELALLSLLLGLVLGLLGALAKLSGNRPLRWLATGYTTVVRGVPDLLLILLLYFGGQIllnaladlfgydGF 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490205021 83 IELDPIPAAMIGLSLNTAAYAAETLRAAIASIDKGQWEAAASIGMTRWQAMRRAILPQAARVALPPLSNSFISLVKDTSL 162
Cdd:COG4215 98 IEINPFVAGVLALGFVFGAYATEVFRGAFLAVPKGQIEAARAYGMSRWQVFRRILLPQMWRYALPGLGNNWLVLLKDTAL 177
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 490205021 163 AATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWVMATVLSTLQNYFENQLNRQER 219
Cdd:COG4215 178 VSVIGLVDLVRQAQEAAGSTREPFTFYLAAALIYLALTTVSELVLARLERRASRGVR 234
|
|
| ectoine_ehuC |
TIGR03004 |
ectoine/hydroxyectoine ABC transporter, permease protein EhuC; Members of this family are ... |
13-216 |
8.66e-47 |
|
ectoine/hydroxyectoine ABC transporter, permease protein EhuC; Members of this family are presumed to act as permease subunits of ectoine ABC transporters. Operons containing this gene also contain the other genes of the ABC transporter and typically are found next to either ectoine utilization or ectoine biosynthesis operons. Permease subunits EhuC and EhuD are homologous.
Pssm-ID: 132049 [Multi-domain] Cd Length: 214 Bit Score: 153.85 E-value: 8.66e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490205021 13 PFLLKGAVFTLQLSIGGMFFGLVLGFILALMRMSPVWPIKWLARMYISIFRGTPLIAQLFMIYYGLPQFGIELDPIPAAM 92
Cdd:TIGR03004 5 PLLLQGAWVTMQITLAGSVLATVLAFFAGLGRVSGGPILRTVALCYIEVFRGTSLLVQLFWFYFVLPLIGLSLDPVTTGV 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490205021 93 IGLSLNTAAYAAETLRAAIASIDKGQWEAAASIGMTRWQAMRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELF 172
Cdd:TIGR03004 85 MVLGLHAGAYGAEIVRGALSSVSVQQLEACRALNFTRFQTLRRISLPQALVEMMPAFGNLAIELLKLTSLVSLISLADLT 164
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 490205021 173 RQAQLITSRTLEVFTMYLAASLIYWVMATVLSTLQNYFENQLNR 216
Cdd:TIGR03004 165 FAAQSIRNLTLDTLSIFAITLLCYFVMALIIMLIMRVLERVVRR 208
|
|
| PRK11123 |
PRK11123 |
arginine ABC transporter permease ArtQ; |
15-222 |
1.04e-41 |
|
arginine ABC transporter permease ArtQ;
Pssm-ID: 182979 [Multi-domain] Cd Length: 238 Bit Score: 141.35 E-value: 1.04e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490205021 15 LLKGAVFTLQLSIGGMFFGLVLGFILALMRMSPVWPIKWLARMYISIFRGTPLIAQLFMIYYGLPQF------------- 81
Cdd:PRK11123 7 LASAAGMTVGLAVCALIVGLALAMLFAVWESAKWRPVAWPGTALVTLLRGLPEILVVLFIYFGSSQLlltlsdgftlnlg 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490205021 82 -----------GIELDPIPAAMIGLSLNTAAYAAETLRAAIASIDKGQWEAAASIGMTRWQAMRRAILPQAARVALPPLS 150
Cdd:PRK11123 87 fvqipvqmdieNFEVSPFLCGVIALSLLYAAYASQTLRGALKAVPVGQWESGQALGLSKSAIFFRLVMPQMWRHALPGLG 166
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 490205021 151 NSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWVMATVLSTLQNYFENQLNRQERDPK 222
Cdd:PRK11123 167 NQWLVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIIAAAIYLVITLISQYILKRIELRATRFERRPS 238
|
|
| glnP |
PRK09494 |
glutamine ABC transporter permease protein; Reviewed |
1-214 |
4.88e-41 |
|
glutamine ABC transporter permease protein; Reviewed
Pssm-ID: 181907 [Multi-domain] Cd Length: 219 Bit Score: 139.04 E-value: 4.88e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490205021 1 MQESIQLVIDSAPFLLKGAVFTLQLSIGGMFFGLVLGFILALMRMSPVWPIKWLARMYISIFRGTPLIAQLFMIYYGLPQ 80
Cdd:PRK09494 1 MQFDWSAIWPAIPLLLEGAKMTLWISVLGLAGGLVIGLLAGFARAYGGWIANHIALVFIELIRGTPIVVQVMFIYFALPM 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490205021 81 F--GIELDPIPAAMIGLSLNTAAYAAETLRAAIASIDKGQWEAAASIGMTRWQAMRRAILPQAARVALPPLSNSFISLVK 158
Cdd:PRK09494 81 AfnDLRIDPFTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRRETLRYVIGPLALRRMLPPLGNQWIISIK 160
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 490205021 159 DTSLAATIQVPELFRQAQLITS---RTLEVFTmylAASLIYWVMATVLSTLQNYFENQL 214
Cdd:PRK09494 161 DTSLFIVIGVAELTRQGQEIIAgnfRALEIWS---AVAVIYLIITLVLSFILRRLERRM 216
|
|
| ectoine_ehuD |
TIGR03003 |
ectoine/hydroxyectoine ABC transporter, permease protein EhuD; Members of this family are ... |
13-214 |
2.72e-40 |
|
ectoine/hydroxyectoine ABC transporter, permease protein EhuD; Members of this family are presumed to act as permease subunits of ectoine ABC transporters. Operons containing this gene also contain the other genes of the ABC transporter and typically are found next to either ectoine utilization or ectoine biosynthesis operons.
Pssm-ID: 132048 [Multi-domain] Cd Length: 212 Bit Score: 136.91 E-value: 2.72e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490205021 13 PFLLKGAVFTLQLSIGGMFFGLVLGFILALMRMSPVWPIKWLARMYISIFRGTPLIAQLFMIYYGLPQFGIELDPIPAAM 92
Cdd:TIGR03003 11 PTLIEGLKITILATALGFAIAAVLGLVFAILRRSAPTPISWPTSFVVEFIRGTPLLVQLYFLYYVLPDIGIRLPALVAGV 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490205021 93 IGLSLNTAAYAAETLRAAIASIDKGQWEAAASIGMTRWQAMRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELF 172
Cdd:TIGR03003 91 LGLGLHYATYAAEVYRAGIEAVPRGQWEAATALNLTARQTYRHIILPQAIPPIIPALGNYLVAMFKETPVLSAITVLELM 170
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 490205021 173 RQAQLITSRTLEVFTMYLAASLIYWVMATVLSTLQNYFENQL 214
Cdd:TIGR03003 171 NQAKSIGNSTFRYLEPMTLVGVFFLILSIISVFFLRRLEARL 212
|
|
| PRK15107 |
PRK15107 |
glutamate/aspartate ABC transporter permease GltK; |
8-211 |
3.42e-38 |
|
glutamate/aspartate ABC transporter permease GltK;
Pssm-ID: 185062 [Multi-domain] Cd Length: 224 Bit Score: 131.88 E-value: 3.42e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490205021 8 VIDSAPFLLKGAVFTLQLSIGGMFFGLVLGFILALMRMSPVWPIKWLARMYISIFRGTPLIAQLFMIYYGLPQF---GIE 84
Cdd:PRK15107 9 IVPSLPYLLDGLVITLKITVTAVVIGILWGTILAVMRLSSFKPVAWFAKAYVNVFRSIPLVMVLLWFYLIVPGFlqnVLG 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490205021 85 LDP-----IPAAMIGLSLNTAAYAAETLRAAIASIDKGQWEAAASIGMTRWQAMRRAILPQAARVALPPLSNSFISLVKD 159
Cdd:PRK15107 89 LSPktdirLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLTQGIVLFQD 168
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 490205021 160 TSLAATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWVMATVLSTLQNYFE 211
Cdd:PRK15107 169 TSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLLVSYLK 220
|
|
| artM |
PRK11122 |
arginine ABC transporter permease ArtM; |
13-219 |
4.90e-37 |
|
arginine ABC transporter permease ArtM;
Pssm-ID: 182978 [Multi-domain] Cd Length: 222 Bit Score: 128.92 E-value: 4.90e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490205021 13 PFLLKGAVFTLQLSIGGMFFGLVLGFILALMRMSPVWPIKWLARMYISIFRGTPLIAQLFMIYYGLPQF----------G 82
Cdd:PRK11122 6 PELLKGLHTSLTLTVASLLVALVLALIFTIILTLKTPVLVWLVRGYITLFTGTPLLVQIFLIYYGPGQFpwlqeypwlwH 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490205021 83 IELDPIPAAMIGLSLNTAAYAAETLRAAIASIDKGQWEAAASIGMTRWQAMrRAILPQAARVALPPLSNSFISLVKDTSL 162
Cdd:PRK11122 86 LLSQPWLCAMLALALNSAAYSTQLFYGAVRAIPEGQWQSCAALGMSKKQTL-RILLPYAFKRALSSYSNEVVLVFKSTSL 164
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 490205021 163 AATIQVPELFRQAQLITSRTLEVfTMYLAASLIYWVMATVLSTLQNYFENQLNRQER 219
Cdd:PRK11122 165 AYTITLMDVMGYSQLLYGRTYDV-MVFGAAGIIYLVVNGLLTLLMRLIERKALAFER 220
|
|
| HEQRo_perm_3TM |
TIGR01726 |
amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; This ... |
13-109 |
1.63e-34 |
|
amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; This model represents one of several classes of multiple membrane spanning regions found immediately N-terminal to the domain described by pfam00528, binding-protein-dependent transport systems inner membrane component. The region covered by this model generally is predicted to contain three transmembrane helices. Substrate specificities attributed to members of this family include histidine, arginine, glutamine, glutamate, and (in Agrobacterium) the opines octopine and nopaline. [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 130787 [Multi-domain] Cd Length: 99 Bit Score: 118.40 E-value: 1.63e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490205021 13 PFLLKGAVFTLQLSIGGMFFGLVLGFILALMRMSPVWPIKWLARMYISIFRGTPLIAQLFMIYYGLPQFGIELDPIPAAM 92
Cdd:TIGR01726 3 PFLLKGLLLTLLLSVLSILLGLVLGLLLALLRLSGNRPLRWIATVYVELFRGTPLLVQLFFIYFGLPLIGIRLSPLTAAV 82
|
90
....*....|....*..
gi 490205021 93 IGLSLNTAAYAAETLRA 109
Cdd:TIGR01726 83 IALTLFYGAYLAEIFRG 99
|
|
| PRK15069 |
PRK15069 |
histidine ABC transporter permease HisM; |
16-203 |
3.07e-31 |
|
histidine ABC transporter permease HisM;
Pssm-ID: 185029 [Multi-domain] Cd Length: 234 Bit Score: 114.38 E-value: 3.07e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490205021 16 LKGAVFTLQLSIGGMFFGLVLGFILALMRMSPVWPIKWLARMYISIFRGTPLIAQLFMIYYGLpqFGIEL---------- 85
Cdd:PRK15069 20 FTGLAITLWLLVASVVIGFVLAVPLAIARVSSNKWIRFPVWLYTYVFRGTPLYVQLLVFYTGM--YSLEIvrgtdlldaf 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490205021 86 --DPIPAAMIGLSLNTAAYAAETLRAAIASIDKGQWEAAASIGMTRWQAMRRAILPQAARVALPPLSNSFISLVKDTSLA 163
Cdd:PRK15069 98 frSGLNCTILAFTLNTCAYTTEIFAGAIRSVPHGEIEAARAYGMSTFKLYRRIILPSALRRALPAYSNEVILMLHATTLA 177
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 490205021 164 ATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWVMATVL 203
Cdd:PRK15069 178 FTATVPDILKIARDINSATYQPFQAFGIAAVLYLIISFVL 217
|
|
| BatB |
COG4597 |
ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]; ... |
22-219 |
9.51e-29 |
|
ABC-type amino acid transport system, permease component [Amino acid transport and metabolism];
Pssm-ID: 443651 [Multi-domain] Cd Length: 397 Bit Score: 111.01 E-value: 9.51e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490205021 22 TLQLSIGGMFFGLVLGFILALMRMSPVWPIKWLARMYISIFRGTPLIAQLFMIYYGL----------------------- 78
Cdd:COG4597 95 TLLVAVLGIVLATILGFLVGIARLSSNWLVSKLATVYVEIFRNIPLLLQIFFWYFAVlealpsprqslslfdgvflnnrg 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490205021 79 -----PQFGIELDPIPAAMI------------------------------------------------------------ 93
Cdd:COG4597 175 lylpaPVFEPGFGWVLAALLaaivaafvlrrwarrrqeatgqrfpvwwislallvglpllaflllgaplsldypelkgfn 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490205021 94 ----------------GLSLNTAAYAAETLRAAIASIDKGQWEAAASIGMTRWQAMRRAILPQAARVALPPLSNSFISLV 157
Cdd:COG4597 255 frggltlspefvalllALSLYTAAFIAEIVRAGIQAVSKGQTEAARALGLRPGQTLRLVVLPQALRVIIPPLTSQYLNLT 334
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490205021 158 KDTSLAATIQVPELFR-QAQLI---TSRTLEVFTM----YLAASLIywvmatvLSTLQNYFENQLNRQER 219
Cdd:COG4597 335 KNSSLAVAIGYPDLVSvFAGTTlnqTGQAIEIIAItmavYLTISLL-------ISLLMNWYNRRVALVER 397
|
|
| TM_PBP2 |
cd06261 |
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ... |
22-204 |
2.43e-24 |
|
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.
Pssm-ID: 119394 [Multi-domain] Cd Length: 190 Bit Score: 95.04 E-value: 2.43e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490205021 22 TLQLSIGGMFFGLVLGFILALMRMSPVWPIKWLARMYISIFRGTPLIAQLFMIYYGLPQFG---IELDPIPAAMIGLSLN 98
Cdd:cd06261 4 TLLLALIATLLALVLGLLLGIILARKRGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLLgwgILPGLGLPALILALLL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490205021 99 TAAYAAETLRAAIASIDKGQWEAAASIGMTRWQAMRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLI 178
Cdd:cd06261 84 IAPFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLGGGEAPGPGTGL 163
|
170 180
....*....|....*....|....*.
gi 490205021 179 TSRTLEVFTMYLAASLIYWVMATVLS 204
Cdd:cd06261 164 LLIFAILFPGDLGVAAAVALILLLLS 189
|
|
| PRK15135 |
PRK15135 |
histidine ABC transporter permease HisQ; |
15-202 |
1.33e-22 |
|
histidine ABC transporter permease HisQ;
Pssm-ID: 185089 [Multi-domain] Cd Length: 228 Bit Score: 91.39 E-value: 1.33e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490205021 15 LLKGAVFTLQLSIGGMFFGLVLGFILALMRMSPVWPIKWLARMYISIFRGTPLIAQLFMIYYGLPQF-----------GI 83
Cdd:PRK15135 9 ILQGALVTLELALSSVVLAVIIGLIGAGGKLSQNRLLGLIFEGYTTLIRGVPDLVLMLLIFYGLQIAlnsvtealgvgQI 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490205021 84 ELDPIPAAMIGLSLNTAAYAAETLRAAIASIDKGQWEAAASIGMTRWQAMRRAILPQAARVALPPLSNSFISLVKDTSLA 163
Cdd:PRK15135 89 DIDPMVAGIITLGFIYGAYFTETFRGAFMAVPKGHIEAATAFGFTRGQVFRRIMFPAMMRYALPGIGNNWQVILKATALV 168
|
170 180 190
....*....|....*....|....*....|....*....
gi 490205021 164 ATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWVMATV 202
Cdd:PRK15135 169 SLLGLEDVVKATQLAGKSTWEPFYFAIVCGVIYLVFTTV 207
|
|
| BPD_transp_1 |
pfam00528 |
Binding-protein-dependent transport system inner membrane component; The alignments cover the ... |
33-211 |
3.55e-16 |
|
Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.
Pssm-ID: 334128 [Multi-domain] Cd Length: 183 Bit Score: 73.49 E-value: 3.55e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490205021 33 GLVLGFILALMRMSPVwpiKWLARMYISIFRGTPLIAQLFMIYYgLPQFGIELDPIPAAMIGLSLNTAAYAAETLRAAIA 112
Cdd:pfam00528 1 GIPLGIIAALRRGRRL---DRLLRPLIDLLQALPSFVLAILLVV-IAILSILGHGILPAIILALLGWAGYARLIRRAALR 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490205021 113 SIDKGQWEAAASIGMTRWQAMRRAILPQAARVALPPLSNSFISLVKDTSLAATI----QVPELFRQAQLItSRTLEVFTM 188
Cdd:pfam00528 77 SLPSDLVEAARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLEFLgswpGLGLLLIEAILG-YDYPEIQGP 155
|
170 180
....*....|....*....|...
gi 490205021 189 YLAASLIYWVMATVLSTLQNYFE 211
Cdd:pfam00528 156 VLAAALILLLLNLLVDILQRLLD 178
|
|
| PhnE |
COG3639 |
ABC-type phosphate/phosphonate transport system, permease component [Inorganic ion transport ... |
15-142 |
1.85e-13 |
|
ABC-type phosphate/phosphonate transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 442856 [Multi-domain] Cd Length: 244 Bit Score: 67.03 E-value: 1.85e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490205021 15 LLKGAVFTLQLSIGGMFFGLVLGFILALM---RMSPVWPIKWLARMYISIFRGTP--LIAQLFMIYYGLPQFgieldpip 89
Cdd:COG3639 49 LLSALLETLAIALLGTLLGAVLALPLAFLaarNLAPNPWVRLLARRLLNVLRAIPelVWALIFVAAVGLGPF-------- 120
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 490205021 90 AAMIGLSLNTAAYAAETLRAAIASIDKGQWEAAASIGMTRWQAMRRAILPQAA 142
Cdd:COG3639 121 AGVLALAIHTIGFLGKLFAEAIEEIDPGPVEALRATGASRLQVIRYGVLPQVL 173
|
|
| FbpB |
COG1178 |
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]; |
11-143 |
2.97e-10 |
|
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440791 [Multi-domain] Cd Length: 538 Bit Score: 59.02 E-value: 2.97e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490205021 11 SAPFLLKGAVFTLQLSIGGMFFGLVLGFILA-LMRMSPVWPIKWLARM---------------YISIFRGTPLIAQLFMI 74
Cdd:COG1178 48 SDPYLWRALGNTLLLALLVTLLSLLLGVPLAwLLARTDFPGRRLLRWLlllplalppyvvalaWIALFGPNGLLNTLLRA 127
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 490205021 75 YYGLPQFGIEldPIPAAMIGLSLNTAAYAAETLRAAIASIDKGQWEAAASIGMTRWQAMRRAILPQAAR 143
Cdd:COG1178 128 LFGLEPPDIY--GLGGIILVLVLFNYPYVYLLLRAALRSIDASLEEAARSLGASPWRAFRRVTLPLLRP 194
|
|
| MetP |
COG2011 |
ABC-type methionine transport system, permease component [Amino acid transport and metabolism]; ... |
15-166 |
1.13e-07 |
|
ABC-type methionine transport system, permease component [Amino acid transport and metabolism];
Pssm-ID: 441614 Cd Length: 220 Bit Score: 50.44 E-value: 1.13e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490205021 15 LLKGAVFTLQLSIGGMFF----GLVLGFILALMRMSPVWPIKWLAR---MYISIFRGTPLIAQLFMIyygLP-------- 79
Cdd:COG2011 12 LLQATGETLYMVGVSTLIavllGLPLGVLLVLTRPGGLLPNPVLYRvlgVIVNIFRSIPFIILLVAL---IPltrlivgt 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490205021 80 QFGIEldpipAAMIGLSLNTAAYAAETLRAAIASIDKGQWEAAASIGMTRWQAMRRAILPQaarvALPPLSNS----FIS 155
Cdd:COG2011 89 SIGTT-----AAIVPLTIAAIPFFARLVENALREVDPGVIEAAQAMGASPWQIIFKVLLPE----ALPSLILGltvtLIS 159
|
170
....*....|.
gi 490205021 156 LVKDTSLAATI 166
Cdd:COG2011 160 LIGYSAMAGAV 170
|
|
| PotB |
COG1176 |
ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport ... |
11-141 |
5.00e-06 |
|
ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism];
Pssm-ID: 440789 [Multi-domain] Cd Length: 287 Bit Score: 46.29 E-value: 5.00e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490205021 11 SAPFLLKGAVFTLQLSIGGMFFGLVLGFILALM--RMSPVWPIKWLA------------RMY--ISIFRGTPLIAQLFMi 74
Cdd:COG1176 61 TDPLYLKVLLRTLWIALLTTLICLLLGYPIAYFlaRAPPRWRNLLLLlvilpfwtsflvRTYawIVLLGRNGLLNSLLL- 139
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 490205021 75 yyglpQFGIELDPIP------AAMIGLSLNTAAYAAETLRAAIASIDKGQWEAAASIGMTRWQAMRRAILPQA 141
Cdd:COG1176 140 -----ALGLIDEPLRllytefAVVIGLVYVYLPFMVLPLYAALEKIDPSLLEAARDLGASPWQTFRRVILPLS 207
|
|
| TauC |
COG0600 |
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion ... |
15-142 |
1.89e-05 |
|
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440365 [Multi-domain] Cd Length: 254 Bit Score: 44.37 E-value: 1.89e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490205021 15 LLKGAVFTLQLSIGGMFFGLVLGFILA-LMRMSPvwPIKWLARMYISIFRGTPLIA--QLFMIYYGLPqfgieldpIPAA 91
Cdd:COG0600 59 LWEHLLASLLRVLLGFALAALLGVPLGlLLGLSR--LLRRLLDPLLVFLRPIPPLAlaPLLILWFGIG--------EASK 128
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 490205021 92 MIGLSLNTAAYAAETLRAAIASIDKGQWEAAASIGMTRWQAMRRAILPQAA 142
Cdd:COG0600 129 IFVIFLGAFFPILLNTAAGVRSVDPELLELARSLGASRWQILRKVVLPAAL 179
|
|
| FbpB |
COG1178 |
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]; |
13-164 |
2.22e-04 |
|
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440791 [Multi-domain] Cd Length: 538 Bit Score: 41.69 E-value: 2.22e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490205021 13 PFLLKGAVFTLQLSIGGMFFGLVLGFILAlmrmspvwpikWLARMYISifRGTPLIAQLFMIYYGLP---------QFGI 83
Cdd:COG1178 334 PSLLRALLNSLLLALLAALLAVLLALLLA-----------YLVRRRRG--RLARLLDRLAMLPYAVPgivlglgllLLFN 400
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490205021 84 ELDPIP--AAMIGLSLNTA----AYAAETLRAAIASIDKGQWEAAASIGMTRWQAMRRAILPQAARVALPPLSNSFISLV 157
Cdd:COG1178 401 RPLPLLlyGTLAILVLAYVvrflPFALRSLEAALAQIDPSLEEAARSLGASPLRTLRRVTLPLLRPGLLAAALLVFVTSM 480
|
....*..
gi 490205021 158 KDTSLAA 164
Cdd:COG1178 481 KELSATL 487
|
|
| PotC |
COG1177 |
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport ... |
15-142 |
3.86e-04 |
|
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism];
Pssm-ID: 440790 [Multi-domain] Cd Length: 262 Bit Score: 40.48 E-value: 3.86e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490205021 15 LLKGAVFTLQLSIGGMFFGLVLGFILALmrmspvwpikWLARMYisiFRGTPLIAQLFMIYYGLP-------------QF 81
Cdd:COG1177 59 LLDALLNSLLIALLSTLLATVLGTPAAL----------ALARYR---FRGRRLLLALLLLPLVVPgivlgvallllfsAL 125
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 490205021 82 GIELdPIPAAMIGLSLNTAAYAAETLRAAIASIDKGQWEAAASIGMTRWQAMRRAILPQAA 142
Cdd:COG1177 126 GLSG-GLWGLILAHVVFTLPFVVLVVLARLQGFDPSLEEAARDLGASPWQTFRRVTLPLIA 185
|
|
| CysU |
COG0555 |
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]; ... |
102-143 |
1.44e-03 |
|
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440321 [Multi-domain] Cd Length: 268 Bit Score: 38.58 E-value: 1.44e-03
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 490205021 102 YAAETLRAAIASIDKGQWEAAASIGMTRWQAMRRAILPQAAR 143
Cdd:COG0555 150 FVVRTVQPVLEELDPELEEAAATLGASRWQTFRRVILPLLLP 191
|
|
| OpuBB |
COG1174 |
ABC-type proline/glycine betaine transport system, permease component [Amino acid transport ... |
23-166 |
2.77e-03 |
|
ABC-type proline/glycine betaine transport system, permease component [Amino acid transport and metabolism];
Pssm-ID: 440787 [Multi-domain] Cd Length: 212 Bit Score: 37.73 E-value: 2.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490205021 23 LQLSIGGMFFGLVLGFILALMrmspVWPIKWLARMYI---SIFRGTPLIAQLFMIyygLPQFGIelDPIPAaMIGLSL-- 97
Cdd:COG1174 24 LLLVLLALLIALLIAVPLGIL----ITRRRRLAGLVLgvaNILQTIPSLALLALL---IPLLGI--GPAPA-IIALVLya 93
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 490205021 98 ------NTAAyaaetlraAIASIDKGQWEAAASIGMTRWQAMRRAILPQAARVALPPLSNSFISLVKDTSLAATI 166
Cdd:COG1174 94 llpilrNTYT--------GLRSVDPAVVEAARGMGMTPWQRLWRVELPLALPVILAGIRTAAVQNIGTATLAALI 160
|
|
| PRK10782 |
PRK10782 |
D-methionine ABC transporter permease MetI; |
15-152 |
2.78e-03 |
|
D-methionine ABC transporter permease MetI;
Pssm-ID: 182726 Cd Length: 217 Bit Score: 37.79 E-value: 2.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 490205021 15 LLKGAVFTLQLSIGGMFFGLVLGF----ILALMRMSPVWPIKWLARMY---ISIFRGTPLIAQL-FMIYYGLPQFGIELD 86
Cdd:PRK10782 9 LVRGVWETLAMTFVSGFFGFVIGLpvgvLLYVTRPGQIIANAKLYRTLsalVNIFRSIPFIILLvWMIPFTRVIVGTSIG 88
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 490205021 87 pIPAAMIGLSLNTAAYAAETLRAAIASIDKGQWEAAASIGMTRWQAMRRAILPQaarvALPPLSNS 152
Cdd:PRK10782 89 -LQAAIVPLTVGAAPFIARMVENALLEIPTGLIEASRAMGATPMQIVRKVLLPE----ALPGLVNA 149
|
|
| |
