|
Name |
Accession |
Description |
Interval |
E-value |
| tyrA |
PRK11199 |
bifunctional chorismate mutase/prephenate dehydrogenase; Provisional |
1-373 |
0e+00 |
|
bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Pssm-ID: 183035 [Multi-domain] Cd Length: 374 Bit Score: 780.60 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489923110 1 MVAELTALRDQIDEVDKALLDLLARRLELVAEVGEVKSRFGLPIYVPEREASMLASRRAEAEALGVPPDLIEDVLRRVMR 80
Cdd:PRK11199 1 MVAELTALRDQIDEVDKQLLELLAKRLELVAQVGEVKSRHGLPIYVPEREAAMLASRRAEAEALGVPPDLIEDVLRRVMR 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489923110 81 ESYSSENDKGFKTLCPSLRPVVIVGGGGQMGRLFEKMLTLSGYQVRILEQQDWDRAPEIVSDAGMVIVSVPIHVTEQVIA 160
Cdd:PRK11199 81 ESYSSENDKGFKTLNPDLRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDDWDRAEDILADAGMVIVSVPIHLTEEVIA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489923110 161 KLPRLPSDCILVDLASVKNGPLQAMLAAHDGPVVGLHPMFGPDSGSLAKQVVVWCDGRQPEAYQWFLEQIQVWGARLHRI 240
Cdd:PRK11199 161 RLPPLPEDCILVDLTSVKNAPLQAMLAAHSGPVLGLHPMFGPDVGSLAKQVVVVCDGRQPEAYQWLLEQIQVWGARLHRI 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489923110 241 SAVEHDQNMAFIQALRHFATFAYGLHLAEENVQLEQLLALSSPIYRLELAMVGRLFAQDPQLYADIIMSSESNLALIKRY 320
Cdd:PRK11199 241 SAVEHDQNMAFIQALRHFATFAYGLHLAKENVDLEQLLALSSPIYRLELAMVGRLFAQDPQLYADIIMSSPENLALIKRY 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 489923110 321 YQRFGEAIGLLEQGDKQAFIDSFRKVEHWFGDYAKRFQSESRTLLRQANDSRP 373
Cdd:PRK11199 321 YQRFGEALELLEQGDKQAFIDSFRKVEHWFGDYAEQFLKESRSLLQQANDNRQ 373
|
|
| PRK08655 |
PRK08655 |
prephenate dehydrogenase; Provisional |
101-352 |
1.08e-47 |
|
prephenate dehydrogenase; Provisional
Pssm-ID: 236326 [Multi-domain] Cd Length: 437 Bit Score: 167.47 E-value: 1.08e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489923110 101 VVIVGGGGQMGRLFEKMLTLSGYQVRIleqqdWDRAP-------------------EIVSDAGMVIVSVPIHVTEQVIAK 161
Cdd:PRK08655 3 ISIIGGTGGLGKWFARFLKEKGFEVIV-----TGRDPkkgkevakelgveyandniDAAKDADIVIISVPINVTEDVIKE 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489923110 162 L-PRLPSDCILVDLASVKNGPLQAML--AAHDGPVVGLHPMFGPDSGSLAKQVVVWC--DGRQ----PEAYQWFLEQiqv 232
Cdd:PRK08655 78 VaPHVKEGSLLMDVTSVKERPVEAMEeyAPEGVEILPTHPMFGPRTPSLKGQVVILTptEKRSnpwfDKVKNFLEKE--- 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489923110 233 wGARLHRISAVEHDQNMAFIQALRHFATFAYGLHLAEENVQLEQLLALSSPIYRLELAMVGRLFAQDPQLYADIIMS--- 309
Cdd:PRK08655 155 -GARVIVTSPEEHDRIMSVVQGLTHFAYISIASTLKRLGVDIKESRKFASPIYELMIDIIGRILGQNPYLYASIQMNnpq 233
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 489923110 310 -SESNLALIKRyYQRFGEaigLLEQGDKQAFIDSFRKVEHWFGD 352
Cdd:PRK08655 234 iPEIHETFIKE-CEELSE---LVKNGDREEFVERMKEAAKHFGD 273
|
|
| CM_T |
TIGR01799 |
chorismate mutase domain of T-protein; This model represents the chorismate mutase domain of ... |
5-87 |
7.56e-37 |
|
chorismate mutase domain of T-protein; This model represents the chorismate mutase domain of the gamma proteobacterial "T-protein" which consists of an N-terminal chorismate mutase domain and a C-terminal prephenate dehydrogenase domain. [Amino acid biosynthesis, Aromatic amino acid family]
Pssm-ID: 130858 [Multi-domain] Cd Length: 83 Bit Score: 128.48 E-value: 7.56e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489923110 5 LTALRDQIDEVDKALLDLLARRLELVAEVGEVKSRFGLPIYVPEREASMLASRRAEAEALGVPPDLIEDVLRRVMRESYS 84
Cdd:TIGR01799 1 LEDLRGEIDGVDQELLHLLAKRLELVAQVGKVKHAAGLPIYAPEREAAMLAARREEAEKAGIAPDLIEDVLRRFMRESYA 80
|
...
gi 489923110 85 SEN 87
Cdd:TIGR01799 81 NEN 83
|
|
| FDXACB |
COG4937 |
Ferredoxin-fold anticodon binding domain [Translation, ribosomal structure and biogenesis]; |
101-356 |
1.22e-26 |
|
Ferredoxin-fold anticodon binding domain [Translation, ribosomal structure and biogenesis];
Pssm-ID: 443964 [Multi-domain] Cd Length: 443 Bit Score: 110.11 E-value: 1.22e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489923110 101 VVIVGGGGQMGRLFEKMLTLSGYQVRILEQQDWDRAPE------------IVSDAGMVIVSVPIHVTEQVIAKL-PRLPS 167
Cdd:COG4937 7 IGIIGGTGEMGQWFAKFFKDFGFEVTIWGRGGKVEIAEklgvgfandndaAIADADIIIVSVPIVITETTIVEVaPKMPK 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489923110 168 DCILVDLASVKNGPLQAMLAAHDGPVVGL--HPMFGPDSGSLAKQVVVW------CDGRQPEAYQWFLEQiqvwGARLHR 239
Cdd:COG4937 87 GSLLMDLTSTKVKPVEAMEKYAPVDVEILgtHPMFGPTPPTLSGQIVILtpiegrCDKWFPKIRNLLEEE----GARIII 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489923110 240 ISAVEHDQNMAFIQALRHFATFAYGLHLAEENVQLEQLLALSSPIYRLELAMVGRLFAQDPQLYADIIMSSESNLALIKR 319
Cdd:COG4937 163 ITPEEHDRMMSVVQGLTHFAYISIGATIKRLDFDVKESRKFASPVYELMLDIIGRIIGQNPYLYASIQMENPEVKKVHET 242
|
250 260 270
....*....|....*....|....*....|....*..
gi 489923110 320 YYQRFGEAIGLLEQGDKQAFIDSFRKVEHWFGDYAKR 356
Cdd:COG4937 243 FIEECNELSNIVRKDDEEGFVEIMKEAAKHFGDTESA 279
|
|
| PheA |
COG1605 |
Chorismate mutase [Amino acid transport and metabolism]; Chorismate mutase is part of the ... |
3-166 |
1.49e-24 |
|
Chorismate mutase [Amino acid transport and metabolism]; Chorismate mutase is part of the Pathway/BioSystem: Aromatic amino acid biosynthesis
Pssm-ID: 441213 [Multi-domain] Cd Length: 166 Bit Score: 98.30 E-value: 1.49e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489923110 3 AELTALRDQIDEVDKALLDLLARRLELVAEVGEVKSRFGLPIYVPEREASMLASRRAEAEALGVPPDLIEDVLRRVMRES 82
Cdd:COG1605 5 ESLEELRAEIDEIDRQLLELLAERAELAKEVGELKKEHGLPIYDPEREAEVLERLRELAEELGLDPEFVEAIFREIISES 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489923110 83 YSSENDKGFKTLCpslrPVVIVGGGGQMGRLFEKMLTLSGYQVRILEQQDWDRAPEIVSDAGMVIVSVPIHVTEQVIAKL 162
Cdd:COG1605 85 IALQEKLLAEVAY----LGPEGGFTGQAAGKHFGGSAASLPAAAIDEVFREVEAGGAAYGVVPVENSTEGGVVETLDLLL 160
|
....
gi 489923110 163 PRLP 166
Cdd:COG1605 161 ASPL 164
|
|
| TyrA |
COG0287 |
Prephenate dehydrogenase [Amino acid transport and metabolism]; Prephenate dehydrogenase is ... |
136-345 |
2.52e-21 |
|
Prephenate dehydrogenase [Amino acid transport and metabolism]; Prephenate dehydrogenase is part of the Pathway/BioSystem: Aromatic amino acid biosynthesis
Pssm-ID: 440056 [Multi-domain] Cd Length: 278 Bit Score: 92.50 E-value: 2.52e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489923110 136 APEIVSDAGMVIVSVPIHVTEQVIAKL-PRLPSDCILVDLASVKNGPLQAM--LAAHDGPVVGLHPMFGPD-SGSLA--- 208
Cdd:COG0287 55 LEEAVADADLVVLAVPVGATIEVLAELaPHLKPGAIVTDVGSVKGAVVEAAeaLLPDGVRFVGGHPMAGTEkSGPEAada 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489923110 209 -----KQVVVwC--DGRQPEAYQWFLEQIQVWGARLHRISAVEHDQNMAFIQALRHFATFAYGLHLAEENVQlEQLLALS 281
Cdd:COG0287 135 dlfegAPYIL-TptEGTDPEALERVEELWEALGARVVEMDPEEHDRVVAAVSHLPHLLAFALVNTVADLEDE-EEILRLA 212
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 489923110 282 SPIYRlelAMVgRLFAQDPQLYADIIMS-SESNLALIKRYYQRFGEAIGLLEQGDKQAFIDSFRK 345
Cdd:COG0287 213 AGGFR---DTT-RIAASDPEMWRDIFLAnREALLEALDRFIEELDALRDALEAGDGEALEELLER 273
|
|
| PRK08818 |
PRK08818 |
prephenate dehydrogenase; Provisional |
97-338 |
1.17e-18 |
|
prephenate dehydrogenase; Provisional
Pssm-ID: 181561 [Multi-domain] Cd Length: 370 Bit Score: 86.46 E-value: 1.17e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489923110 97 SLRPVV-IVGGGGQMGRLFEKML-TLSGYQVRILEQQDWDRAPE--IVSDAGMVIVSVPIHVTEQVIAKLPRLP----SD 168
Cdd:PRK08818 2 IAQPVVgIVGSAGAYGRWLARFLrTRMQLEVIGHDPADPGSLDPatLLQRADVLIFSAPIRHTAALIEEYVALAggraAG 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489923110 169 CILVDLASVKNGPLQAMLAAHdGPVVGLHPMFGP-DSGSLAKQVVVWCDGRQPEAYQWFLEQIQVWGARLHRISAVEHDQ 247
Cdd:PRK08818 82 QLWLDVTSIKQAPVAAMLASQ-AEVVGLHPMTAPpKSPTLKGRVMVVCEARLQHWSPWVQSLCSALQAECVYATPEHHDR 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489923110 248 NMAFIQALRHfATfayglHLAEENV---------QLEQLLALSSPIYRLELAMVGRLFAQDPQLYADIIMSSESNLALIK 318
Cdd:PRK08818 161 VMALVQAMVH-AT-----HLAQAGVlrdyapllgELRALMPYRSASFELDTAVIARILSLNPSIYEDIQFGNPYVGEMLD 234
|
250 260
....*....|....*....|
gi 489923110 319 RYYQRFGEAIGLLEQGDKQA 338
Cdd:PRK08818 235 RLLAQLQELRALVAQGDDAA 254
|
|
| CM_2 |
pfam01817 |
Chorismate mutase type II; Chorismate mutase EC:5.4.99.5 catalyzes the conversion of ... |
9-87 |
2.09e-14 |
|
Chorismate mutase type II; Chorismate mutase EC:5.4.99.5 catalyzes the conversion of chorismate to prephenate in the pathway of tyrosine and phenylalanine biosynthesis. This enzyme is negatively regulated by tyrosine, tryptophan and phenylalanine.
Pssm-ID: 460345 [Multi-domain] Cd Length: 79 Bit Score: 67.52 E-value: 2.09e-14
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 489923110 9 RDQIDEVDKALLDLLARRLELVAEVGEVKSRFGLPIYVPEREASMLASRRAEAEALGVPPDLIEDVLRRVMRESYSSEN 87
Cdd:pfam01817 1 RAEIDEIDREILELLAERMELAREIGEYKKENGLPVYDPEREEEVLERLRAGAEELGLDPDFIEAIFREIISESRALQK 79
|
|
| CM_2 |
smart00830 |
Chorismate mutase type II; Chorismate mutase, catalyses the conversion of chorismate to ... |
9-87 |
3.40e-14 |
|
Chorismate mutase type II; Chorismate mutase, catalyses the conversion of chorismate to prephenate in the pathway of tyrosine and phenylalanine biosynthesis. This enzyme is negatively regulated by tyrosine, tryptophan and phenylalanine..
Pssm-ID: 214841 [Multi-domain] Cd Length: 79 Bit Score: 67.22 E-value: 3.40e-14
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 489923110 9 RDQIDEVDKALLDLLARRLELVAEVGEVKSRFGLPIYVPEREASMLASRRAEAEALGVPPDLIEDVLRRVMRESYSSEN 87
Cdd:smart00830 1 RAEIDAIDDQILALLAERAALAREVARLKAKNGLPIRDPEREAEVLERLRALAEGPGLDPELVERIFREIIEASIALQK 79
|
|
| PRK08507 |
PRK08507 |
prephenate dehydrogenase; Validated |
138-314 |
6.77e-11 |
|
prephenate dehydrogenase; Validated
Pssm-ID: 181452 [Multi-domain] Cd Length: 275 Bit Score: 62.22 E-value: 6.77e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489923110 138 EIVS-----DAGMVIVSVPIHVTEQVIAKLPRLPSDCILVDLASVKNGPLQAMLAAHDGPVVGLHPM-----FGPDS--- 204
Cdd:PRK08507 49 EIVSfeelkKCDVIFLAIPVDAIIEILPKLLDIKENTTIIDLGSTKAKIIESVPKHIRKNFIAAHPMagtenSGPKAaik 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489923110 205 GSLAKQVVVWCDGRQP-EAYQWFLEQI-QVWGARLHRISAVEHDQNMAFIQALRHFATFAYGLH-LAEENVQleQLLALS 281
Cdd:PRK08507 129 GLYEGKVVVLCDVEKSgEKHQERAKEIfSGLGMRIVYMDAKEHDLHAAYISHLPHIISFALANTvLKEEDER--NIFDLA 206
|
170 180 190
....*....|....*....|....*....|...
gi 489923110 282 SPIYRlelAMVgRLFAQDPQLYADIIMSSESNL 314
Cdd:PRK08507 207 GGGFR---SMS-RLAKSSPAMWSDIFKQNKENV 235
|
|
| PDH_C |
pfam20463 |
Prephenate dehydrogenase, dimerization domain; Members of this family are prephenate ... |
241-344 |
5.95e-10 |
|
Prephenate dehydrogenase, dimerization domain; Members of this family are prephenate dehydrogenases EC:1.3.1.12 (PDHs) involved in tyrosine biosynthesis. This is the C-terminal, helical dimerization domain of PDHs.
Pssm-ID: 466612 [Multi-domain] Cd Length: 102 Bit Score: 55.85 E-value: 5.95e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489923110 241 SAVEHDQNMAFIQALRHFATFAYGLHLAEENVQLEQLLALSSPIYRLelamVGRLFAQDPQLYADIIMSSESNLA-LIKR 319
Cdd:pfam20463 1 SPETHDRVVAVVSHLPHFVAIALAATLAELGVDIKEARKLASGGFRD----MTRIAGSNPELWADIQTHNARAVLeALDD 76
|
90 100
....*....|....*....|....*
gi 489923110 320 YYQRFGEAIGLLEQGDKQAFIDSFR 344
Cdd:pfam20463 77 FIAELKQLKELIRNGDWEELVEYMK 101
|
|
| PLN02712 |
PLN02712 |
arogenate dehydrogenase |
106-324 |
6.68e-09 |
|
arogenate dehydrogenase
Pssm-ID: 215382 [Multi-domain] Cd Length: 667 Bit Score: 57.68 E-value: 6.68e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489923110 106 GGGQMGRLFEKMLTLSGYQVRILEQQDW-DRAPEI----VSDAG--------MVIVSVPIHVTEQVIAKLP--RLPSDCI 170
Cdd:PLN02712 376 GFGNFGQFLAKTMVKQGHTVLAYSRSDYsDEAQKLgvsyFSDADdlceehpeVILLCTSILSTEKVLKSLPfqRLKRSTL 455
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489923110 171 LVDLASVKNGPLQAMLAA--HDGPVVGLHPMFGPDSGS--------LAKQVVVWCDGRQPEAYQWFLEQIQVWGARLHRI 240
Cdd:PLN02712 456 FVDVLSVKEFPRNLFLQHlpQDFDILCTHPMFGPESGKngwnnlafVFDKVRIGSDDRRVSRCDSFLDIFAREGCRMVEM 535
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489923110 241 SAVEHDQNMAFIQalrhFATFAYGLHLaeENVQLEqllalSSPI----YRLELAMVGRLFAQDPQLYADIIMSSESNLAL 316
Cdd:PLN02712 536 SCAEHDWHAAGSQ----FITHTMGRLL--EKLGLE-----STPIntkgYETLLNLVENTAGDSFDLYYGLFMYNVNAMEQ 604
|
....*...
gi 489923110 317 IKRYYQRF 324
Cdd:PLN02712 605 LERLDLAF 612
|
|
| PRK06545 |
PRK06545 |
prephenate dehydrogenase; Validated |
138-338 |
7.87e-09 |
|
prephenate dehydrogenase; Validated
Pssm-ID: 235824 [Multi-domain] Cd Length: 359 Bit Score: 56.45 E-value: 7.87e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489923110 138 EIVSDAGMVIVSVPIHVTEQVIAKLPR--LPSDCILVDLASVKNGPLQAMLAAHDGPV--VGLHPMFGPD-SGSLAKQ-- 210
Cdd:PRK06545 56 RAAAEADLIVLAVPVDATAALLAELADleLKPGVIVTDVGSVKGAILAEAEALLGDLIrfVGGHPMAGSHkSGVAAARad 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489923110 211 -------VVVWCDGRQPEAyqwfLEQIQVW----GARLHRISAVEHDQNMAFIQALRHFATFAYGLHLAEENvqleqLLA 279
Cdd:PRK06545 136 lfenapwVLTPDDHTDPDA----VAELKDLlsgtGAKFVVLDAEEHDRAVALVSHLPHILASSLAARLAGEH-----PLA 206
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 489923110 280 LSspiyrleLAMVG-----RLFAQDPQLYADIImssESN----LALIKRYYQRFGEAIGLLEQGDKQA 338
Cdd:PRK06545 207 LR-------LAAGGfrditRIASSDPGMWRDIL---ESNaealLDALDEWIEDLDRARDALESGDAEA 264
|
|
| PDH_N |
pfam02153 |
Prephenate dehydrogenase, nucleotide-binding domain; Members of this family are prephenate ... |
138-237 |
2.73e-08 |
|
Prephenate dehydrogenase, nucleotide-binding domain; Members of this family are prephenate dehydrogenases (PDHs) EC:1.3.1.12 involved in tyrosine biosynthesis. This is the N-terminal nucleotide-binding domain of PDHs, which has a modified Rossmann nucleotide-binding fold with an extended beta-sheet sandwiched by three helices on each face.
Pssm-ID: 460467 [Multi-domain] Cd Length: 154 Bit Score: 52.39 E-value: 2.73e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489923110 138 EIVSDAGMVIVSVPIHVTEQVIAKL-PRLPSDCILVDLASVKNGP---LQAMLAAHDgpVVGLHPMFGPDS--------G 205
Cdd:pfam02153 41 EAVREADIVFLAVPVEQTLPVLKELaPHLKEDALITDVGSVKVKIireLEQHLPDKS--FVPGHPMAGTEKsgpdaaraN 118
|
90 100 110
....*....|....*....|....*....|....*
gi 489923110 206 SLAKQVVVWCDGRQPEAyQWFLEQIQVW---GARL 237
Cdd:pfam02153 119 LFENAPVILTPTEKTDT-EALNCVKELLegvGARV 152
|
|
| PLN02256 |
PLN02256 |
arogenate dehydrogenase |
146-257 |
3.82e-08 |
|
arogenate dehydrogenase
Pssm-ID: 215144 [Multi-domain] Cd Length: 304 Bit Score: 54.28 E-value: 3.82e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489923110 146 VIVSVPIHVTEQVIAKLP--RLPSDCILVDLASVKNGPLQAMLAA--HDGPVVGLHPMFGPDSG--SLAKQVVVW----- 214
Cdd:PLN02256 96 VLLCTSILSTEAVLRSLPlqRLKRSTLFVDVLSVKEFPKNLLLQVlpEEFDILCTHPMFGPESGkgGWAGLPFVYdkvri 175
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 489923110 215 -CDGRQPEAYQWFLEQIQVWGARLHRISAVEHDQNMAFIQALRH 257
Cdd:PLN02256 176 gDEGEREARCERFLDIFEEEGCRMVEMSCEEHDRYAAGSQFITH 219
|
|
| PRK14806 |
PRK14806 |
bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; ... |
138-343 |
1.58e-07 |
|
bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional
Pssm-ID: 237820 [Multi-domain] Cd Length: 735 Bit Score: 53.07 E-value: 1.58e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489923110 138 EIVSDAGMVIVSVPIHVTEQVIAKL-PRLPSDCILVDLASVKNGPLQAMLAAHDG-P--VVGLHPMFGPD-SGSLAKQVV 212
Cdd:PRK14806 59 EAVSGADVIVLAVPVLAMEKVLADLkPLLSEHAIVTDVGSTKGNVVDAARAVFGElPagFVPGHPIAGSEkSGVHAANAD 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489923110 213 VWCDGR-----QPEAYQWFLEQI-QVW---GARLHRISAVEHDQNMAFIQALRHFatFAYGL--HLAEENVQLEqllals 281
Cdd:PRK14806 139 LFRNHKviltpLAETDPAALARVdRLWravGADVLHMDVAHHDEVLAATSHLPHL--LAFSLvdQLANREDNLD------ 210
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 489923110 282 spIYRleLAMVG-----RLFAQDPQLYADIIMSS-ESNLALIKRYYQRFGEAIGLLEQGDKQAFIDSF 343
Cdd:PRK14806 211 --IFR--YAAGGfrdftRIAASDPVMWHDIFLANkEAVLRALDHFRDDLDALRAAIEAGDGHALLGVF 274
|
|
| PRK07502 |
PRK07502 |
prephenate/arogenate dehydrogenase family protein; |
134-343 |
2.77e-07 |
|
prephenate/arogenate dehydrogenase family protein;
Pssm-ID: 236034 [Multi-domain] Cd Length: 307 Bit Score: 51.51 E-value: 2.77e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489923110 134 DRAPEIVSDAGMVIVSVPIHVTEQVIAKL-PRLPSDCILVDLASVKnGPLQAMLAAHDGPVVGL---HPMF-----GPDS 204
Cdd:PRK07502 58 TSAAEAVKGADLVILCVPVGASGAVAAEIaPHLKPGAIVTDVGSVK-ASVIAAMAPHLPEGVHFipgHPLAgtehsGPDA 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489923110 205 GSLAKQVVVWC-----DGRQPEAYQWFLEQIQVWGARLHRISAVEHDQNMAFIQALRHFatFAYGL-----HLaeENVQL 274
Cdd:PRK07502 137 GFAELFENRWCiltppEGTDPAAVARLTAFWRALGARVEEMDPEHHDLVLAITSHLPHL--IAYTIvgtadDL--ERVTE 212
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 489923110 275 EQLLALSSPIYRlelaMVGRLFAQDPQLYADIIMSS-ESNLALIkryyQRFGEAIGLLEQ----GDKQAFIDSF 343
Cdd:PRK07502 213 SEVIKYSASGFR----DFTRIAASDPTMWRDVFLHNkDAVLEML----GRFTEDLAALQRairwGDGDALFDLF 278
|
|
| PRK06444 |
PRK06444 |
prephenate dehydrogenase; Provisional |
101-255 |
6.87e-07 |
|
prephenate dehydrogenase; Provisional
Pssm-ID: 102381 [Multi-domain] Cd Length: 197 Bit Score: 49.46 E-value: 6.87e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489923110 101 VVIVGGGGQMGRLFEKMLTLSGYQVRIleqQDWDrapeivsdagMVIVSVPIHVTEQVIAKlprlpSDCILVDLASVKng 180
Cdd:PRK06444 3 EIIIGKNGRLGRVLCSILDDNGLGVYI---KKAD----------HAFLSVPIDAALNYIES-----YDNNFVEISSVK-- 62
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 489923110 181 plqAMLAAHDGPVVGLHPMFGPDS--GSLAKQVVVWCDGRQPEaYQWFLEQIqVWGARLHRISAVEHDQNMAFIQAL 255
Cdd:PRK06444 63 ---WPFKKYSGKIVSIHPLFGPMSynDGVHRTVIFINDISRDN-YLNEINEM-FRGYHFVEMTADEHDLLMSEIMVK 134
|
|
| CM_archaeal |
TIGR01791 |
chorismate mutase, archaeal type; This model represents a clade of archaeal chorismate mutases. ... |
5-82 |
9.63e-06 |
|
chorismate mutase, archaeal type; This model represents a clade of archaeal chorismate mutases. Chorismate mutase catalyzes the conversion of chorismate into prephenate which is subsequently converted into either phenylalanine or tyrosine. In Sulfolobus this gene is found as a fusion with prephenate dehydrogenase (although the non-TIGR annotation contains a typographical error indicating it as a dehydratase OMNI|NTL02SS0274) which is the next enzyme in the tyrosine biosynthesis pathway. The Archaeoglobus gene contains an N-terminal prephenate dehydrogenase domain and a C-terminal prephenate dehydratase domain followed by a regulatory amino acid-binding ACT domain. The Thermoplasma volcanium gene is adjacent to prephenate dehydratase. [Amino acid biosynthesis, Aromatic amino acid family]
Pssm-ID: 130851 [Multi-domain] Cd Length: 83 Bit Score: 43.57 E-value: 9.63e-06
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 489923110 5 LTALRDQIDEVDKALLDLLARRLELVAEVGEVKSRFGLPIYVPEREASMLASRRAEAEALGVPPDLIEDVLRRVMRES 82
Cdd:TIGR01791 1 IEELRQEIEEIDKSILDLIEKRIKIARKIGEIKHNNGLPITDEEREERVIERLRNTARNLGLDVLKLKEIFEILMSLS 78
|
|
| PLN02712 |
PLN02712 |
arogenate dehydrogenase |
145-355 |
1.69e-05 |
|
arogenate dehydrogenase
Pssm-ID: 215382 [Multi-domain] Cd Length: 667 Bit Score: 46.90 E-value: 1.69e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489923110 145 MVIVSVPIHVTEQVIAKLP--RLPSDCILVDLASVKNGPLQAMLA--AHDGPVVGLHPMFGPDSGSLA--------KQVV 212
Cdd:PLN02712 111 VILLCTSIISTENVLKSLPlqRLKRNTLFVDVLSVKEFAKNLLLDylPEDFDIICSHPMFGPQSAKHGwdglrfvyEKVR 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489923110 213 VWCDGRQPEAYQWFLEQIQVWGARLHRISAVEHDQNMAFIQalrhFATFAYGLhlaeenvQLEQLLALSSPI----YRLE 288
Cdd:PLN02712 191 IGNEELRVSRCKSFLEVFEREGCKMVEMSCTEHDKYAAESQ----FITHTVGR-------VLEMLKLESTPIntkgYESL 259
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 489923110 289 LAMVGRLFAQDPQLYADIIMSSESNLALIKRY--------YQRFGEAIGLLEqgdKQAFIDSFRKVeHWFGDYAK 355
Cdd:PLN02712 260 LDLVENTCGDSFDLYYGLFMYNKNSLEMLERLdlafealrKQLFGRLHGVVR---KQLFGNEEKKV-HVQPNHAE 330
|
|
| PRK09239 |
PRK09239 |
chorismate mutase; Provisional |
1-81 |
5.71e-05 |
|
chorismate mutase; Provisional
Pssm-ID: 181719 [Multi-domain] Cd Length: 104 Bit Score: 41.93 E-value: 5.71e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489923110 1 MVAELTALRDQIDEVDKALLDLLARRLELVAEVGEVKSRFGLPIYVPEREASMLASRRAEAEALGVPPDLIEDVLRRVMR 80
Cdd:PRK09239 8 APAELAALRQSIDNIDAALIHMLAERFKCTQAVGVLKAEHGLPPADPAREAYQIERLRQLAKDANLDPDFAEKFLNFIIK 87
|
.
gi 489923110 81 E 81
Cdd:PRK09239 88 E 88
|
|
| PRK07417 |
PRK07417 |
prephenate/arogenate dehydrogenase; |
137-338 |
8.52e-05 |
|
prephenate/arogenate dehydrogenase;
Pssm-ID: 180970 [Multi-domain] Cd Length: 279 Bit Score: 43.73 E-value: 8.52e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489923110 137 PEIVSDAGMVIVSVPIHVTEQVIAKL-PRLPSDCILVDLASVKNGPLQAMLAAHDGpVVGLHPMFG-PDSGSLAKQ---- 210
Cdd:PRK07417 52 LSLLKDCDLVILALPIGLLLPPSEQLiPALPPEAIVTDVGSVKAPIVEAWEKLHPR-FVGSHPMAGtAESGVEAGQrglf 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489923110 211 -----VVVWCDGRQPEAYQWFLEQIQVWGARLHRISAVEHDQNMAFIQALRHFATFAYGLHLAEEN----VQLEQLLALS 281
Cdd:PRK07417 131 knrpwVLTPTENTDLNALAIVEELAVSLGSKIYTADPEEHDRAVALISHLPVMVSAALIQTCGTEKdpsvLKLAQNLASS 210
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 489923110 282 SpiyrleLAMVGRLFAQDPQLYADiiMSSESNLAL---IKRYYQRFGEAIGLLEQGDKQA 338
Cdd:PRK07417 211 G------FADTSRVGGGNPELGVM--MAEYNRAALlrsLASYRQSLDQLEELIEQENWSA 262
|
|
| CM-like |
TIGR01803 |
chorismate mutase related enzymes; This subfamily includes two enzymes which are variants on ... |
5-72 |
8.54e-05 |
|
chorismate mutase related enzymes; This subfamily includes two enzymes which are variants on the mechanism of chorismate mutase and are likely to have evolved from an ancestral chorismate mutase enzyme. 4-amino-4-deoxy-chorismate mutase produces amino-deoxy-prephenate which is subsequently converted to para-dimethylamino-phenylalanine, a component of the natural product pristinamycin. Isochorismate-pyruvate lyase presumably catalyzes the same type of 2+2+2 cyclo-rearrangement as chorismate mutase, but acting on isochorismate, this results in two broken bonds instead of one broken and one made. The product of this reaction is salicylate (2-hydroxy-benzoate) which is also incorporated into various natural products.
Pssm-ID: 130862 [Multi-domain] Cd Length: 82 Bit Score: 40.65 E-value: 8.54e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 489923110 5 LTALRDQIDEVDKALLDLLARRLELVAEVGEVKSRFGLPIYVPEREASMLASRRAEAEALGVPPDLIE 72
Cdd:TIGR01803 1 LADIREAIDRIDLALVQALGRRMDYVKRASEFKRSHEAAIPAPERVAAVLPNAARWAEENGLDPPFVE 68
|
|
| PRK12595 |
PRK12595 |
bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed |
1-55 |
2.55e-04 |
|
bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Pssm-ID: 183614 [Multi-domain] Cd Length: 360 Bit Score: 42.66 E-value: 2.55e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 489923110 1 MVAELTALRDQIDEVDKALLDLLARRLELVAEVGEVKSRFGLPIYVPEREASMLA 55
Cdd:PRK12595 2 MNEELEQLRKEIDEINLQLLELLSKRGELVQEIGEEKTKQGTKRYDPVREREMLD 56
|
|
| CM_P2 |
TIGR01807 |
chorismate mutase domain of proteobacterial P-protein, clade 2; This model represents one of ... |
5-79 |
5.28e-04 |
|
chorismate mutase domain of proteobacterial P-protein, clade 2; This model represents one of two separate clades of the chorismate mutase domain of the gamma and beta and epsilon proteobacterial "P-protein" which contains an N-terminal chorismate mutase domain and a C-terminal prephenate dehydratase domain. It is also found in Aquifex aolicus. [Amino acid biosynthesis, Aromatic amino acid family]
Pssm-ID: 130866 [Multi-domain] Cd Length: 76 Bit Score: 38.20 E-value: 5.28e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 489923110 5 LTALRDQIDEVDKALLDLLARRLELVAEVGEVKSRF--GLPIYVPEREASMLasRRAEAEALG-VPPDLIEDVLRRVM 79
Cdd:TIGR01807 1 LEELRNKIDAIDDRILDLLSERATYAQAVGELKGSGasGASFYRPEREAQVI--RRLQNLNKGpLDQEAIARIFREIM 76
|
|
| PRK11861 |
PRK11861 |
bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase; Provisional |
146-314 |
1.12e-03 |
|
bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase; Provisional
Pssm-ID: 183343 [Multi-domain] Cd Length: 673 Bit Score: 40.84 E-value: 1.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489923110 146 VIVSVPIHVTEQVIAKL-PRLPSDCILVDLASVKN---GPLQAMLAAHDGPVVGLHPMFGPDSGSLAKQVVVWCDGRQ-- 219
Cdd:PRK11861 1 VLLAAPVAQTGPLLARIaPFLDASTIVTDAGSTKSdvvAAARAALGARIGQFVPGHPIAGRESSGVDAALADLYVGRNvv 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489923110 220 ----PEAYQWFLEQIQ-VWGAR---LHRISAVEHDQNMAFIQALRHFATFAYglhlaeenvqLEQLLALSSPIYRLELAM 291
Cdd:PRK11861 81 lcalPENAPDALARVEaMWRAAradVRAMSAEQHDRVFAAVSHLPHVLSFAL----------VEQILGESDAELKFSYAA 150
|
170 180
....*....|....*....|....*...
gi 489923110 292 VG-----RLFAQDPQLYADIIMSSESNL 314
Cdd:PRK11861 151 GGfrdftRIAASSPEMWRDVCLANRAAL 178
|
|
| PRK06285 |
PRK06285 |
chorismate mutase; Provisional |
4-79 |
1.20e-03 |
|
chorismate mutase; Provisional
Pssm-ID: 180509 [Multi-domain] Cd Length: 96 Bit Score: 37.71 E-value: 1.20e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 489923110 4 ELTALRDQIDEVDKALLDLLARRLELVAEVGEVKSRFGLPIYVPEREASMLASRRAEAEALGVPPDLIEDVLRRVM 79
Cdd:PRK06285 8 RLNEIRKRIDEIDEQIIDLIAERTSLAKEIAELKKSLGMPIFDPEREDYIHEKIRKLCEEHNIDENIGLKIMKILM 83
|
|
| CM_mono_grmpos |
TIGR01805 |
monofunctional chorismate mutase, gram positive-type, clade 2; This model represents a clade ... |
5-62 |
5.98e-03 |
|
monofunctional chorismate mutase, gram positive-type, clade 2; This model represents a clade of chorismate mutase proteins/domains from gram positive species. The sequence from Enterococcus is fused to the C-terminus of an aparrent acetyltransferase, and the seuence from Clostridium acetobutylicum (but not perfringens) is fused to the N-terminus of shikimate-5-dehydrogenase, another enzyme of the chorismate pathway. All the other members of this clade are mono-functional. Members of this clade from Streptococcus and Lactococcus have been found which represent the sole chorismate mutase domain in their respective genomes which also exhibit evidence of the enzymes of both the upstream and downstream branches of the chorismate pathways. [Amino acid biosynthesis, Aromatic amino acid family]
Pssm-ID: 130864 [Multi-domain] Cd Length: 81 Bit Score: 35.52 E-value: 5.98e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 489923110 5 LTALRDQIDEVDKALLDLLARRLELVAEVGEVKSRFGLPIYVPEREASMLASRRAEAE 62
Cdd:TIGR01805 1 LELIRKKIDEIDDKLVVLFEERMEVVKEIAAYKKKNGIPIFDSKREQEIIDKCTKNVE 58
|
|
| PRK07075 |
PRK07075 |
isochorismate lyase; |
5-73 |
8.47e-03 |
|
isochorismate lyase;
Pssm-ID: 136191 [Multi-domain] Cd Length: 101 Bit Score: 35.48 E-value: 8.47e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 489923110 5 LTALRDQIDEVDKALLDLLarrlelVAEVGEVK--SRFG---LPIYVPEREASMLASRRAEAEALGVPPDLIED 73
Cdd:PRK07075 10 LDDIREAIDRLDRDIIAAL------GRRMQYVKaaSRFKpseASIPAPERVAAMLPERRRWAEQAGLDADFVEK 77
|
|
|