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Conserved domains on  [gi|489738226|ref|WP_003642321|]
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iron-sulfur cluster biosynthesis family protein [Lactiplantibacillus plantarum]

Protein Classification

iron-sulfur cluster biosynthesis family protein( domain architecture ID 10478949)

uncharacterized iron-sulfur cluster biosynthesis family protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Fe-S_biosyn pfam01521
Iron-sulphur cluster biosynthesis; This family is involved in iron-sulphur cluster ...
 3-110 1.49e-19

Iron-sulphur cluster biosynthesis; This family is involved in iron-sulphur cluster biosynthesis. Its members include proteins that are involved in nitrogen fixation such as the HesB and HesB-like proteins.


:

Pssm-ID: 426304  Cd Length: 111  Bit Score: 77.69  E-value: 1.49e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489738226    3 QIEISDRLKALLVAK-GFDKKQLVLVTDDGGGKYSLhgGACSIGTKFTIIVLDQPDPEYNvTVVNNQSLALWTSTYDLIF 81
Cdd:pfam01521   2 KITITDAAAERLKKLlAGDKKELRLDVDDGGGPYSK--GGCSIGGKFSLVLVDEPDPDYD-EVIESNGGPIYVDSYSLPF 78

                          90       100       110
                  ....*....|....*....|....*....|.
gi 489738226   82 FNDGIKMDYDQGRIAI--KDNAHMLDNAVQI 110
Cdd:pfam01521  79 LDEGLTLDFVEDLGTLglKSDNGNLDGNVGC 109
 
Name Accession Description Interval E-value
Fe-S_biosyn pfam01521
Iron-sulphur cluster biosynthesis; This family is involved in iron-sulphur cluster ...
 3-110 1.49e-19

Iron-sulphur cluster biosynthesis; This family is involved in iron-sulphur cluster biosynthesis. Its members include proteins that are involved in nitrogen fixation such as the HesB and HesB-like proteins.


Pssm-ID: 426304  Cd Length: 111  Bit Score: 77.69  E-value: 1.49e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489738226    3 QIEISDRLKALLVAK-GFDKKQLVLVTDDGGGKYSLhgGACSIGTKFTIIVLDQPDPEYNvTVVNNQSLALWTSTYDLIF 81
Cdd:pfam01521   2 KITITDAAAERLKKLlAGDKKELRLDVDDGGGPYSK--GGCSIGGKFSLVLVDEPDPDYD-EVIESNGGPIYVDSYSLPF 78

                          90       100       110
                  ....*....|....*....|....*....|.
gi 489738226   82 FNDGIKMDYDQGRIAI--KDNAHMLDNAVQI 110
Cdd:pfam01521  79 LDEGLTLDFVEDLGTLglKSDNGNLDGNVGC 109
 
Name Accession Description Interval E-value
Fe-S_biosyn pfam01521
Iron-sulphur cluster biosynthesis; This family is involved in iron-sulphur cluster ...
 3-110 1.49e-19

Iron-sulphur cluster biosynthesis; This family is involved in iron-sulphur cluster biosynthesis. Its members include proteins that are involved in nitrogen fixation such as the HesB and HesB-like proteins.


Pssm-ID: 426304  Cd Length: 111  Bit Score: 77.69  E-value: 1.49e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489738226    3 QIEISDRLKALLVAK-GFDKKQLVLVTDDGGGKYSLhgGACSIGTKFTIIVLDQPDPEYNvTVVNNQSLALWTSTYDLIF 81
Cdd:pfam01521   2 KITITDAAAERLKKLlAGDKKELRLDVDDGGGPYSK--GGCSIGGKFSLVLVDEPDPDYD-EVIESNGGPIYVDSYSLPF 78

                          90       100       110
                  ....*....|....*....|....*....|.
gi 489738226   82 FNDGIKMDYDQGRIAI--KDNAHMLDNAVQI 110
Cdd:pfam01521  79 LDEGLTLDFVEDLGTLglKSDNGNLDGNVGC 109
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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