|
Name |
Accession |
Description |
Interval |
E-value |
| TPR_15 |
pfam13429 |
Tetratricopeptide repeat; |
447-714 |
1.30e-84 |
|
Tetratricopeptide repeat;
Pssm-ID: 433199 [Multi-domain] Cd Length: 279 Bit Score: 276.55 E-value: 1.30e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 447 RMARHFPLsvKERMQWAETHWNLFDPRQAWKVL-AGVDTRAIREPEFWRLRAALAWALEQDDDARAAYERMLALDIRlNS 525
Cdd:pfam13429 1 RLARFDPP--NEAYALATLLYGQGDPRKALAALkEGAQTAPASDTEFWRTLADLAWALQQDDDARRAYRQLLASGKA-RA 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 526 SDEDQLIALYRDSNPKQALQVLIGSWQRSRDPRRLASALQLAENLHDWPALKSLLAEAEGLPEAQGSPYYWVARARLAEQ 605
Cdd:pfam13429 78 DDYERLILLLYDARPKDAARLSELGWRRFRSPRHLYSALYLYERAGDYDRLARLLASLEELPAAEQSPAFWLARAEYYRQ 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 606 EGHGDVAERLYREALVRFPGENLVRERLLWFYIDRGRRDSLAPLLAQWHGLALRDSTLWLPFASASLLLERNDQALAWFR 685
Cdd:pfam13429 158 TGEPDAALRDYRRALALAPASTELRAALLWFLIDLGRRAELRPALAAWRARAETDADLWGPLAAAYLRLGRPRKALPYLR 237
|
250 260
....*....|....*....|....*....
gi 489547885 686 LYLKSNPNDWLVQAAYADALDASGYQDKA 714
Cdd:pfam13429 238 KQAASNRNDPLWLLAYADALEQAGRADAA 266
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
122-377 |
2.11e-08 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 57.05 E-value: 2.11e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 122 MDEEQTRRLLERLRK-IEHVSLNDAMLERLARHALALDAPDLAARTFAELAGRDPQgRQRWLDEAARWYLASGEPLPAAD 200
Cdd:COG2956 19 LLNGQPDKAIDLLEEaLELDPETVEAHLALGNLYRRRGEYDRAIRIHQKLLERDPD-RAEALLELAQDYLKAGLLDRAEE 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 201 IQRQLAEAQTESAKRLAYLRQAFASLlagERGEQAALLLDERLDALPEDESTLAWLAegvRAAEGSQRYDLAERFIRRWR 280
Cdd:COG2956 98 LLEKLLELDPDDAEALRLLAEIYEQE---GDWEKAIEVLERLLKLGPENAHAYCELA---ELYLEQGDYDEAIEALEKAL 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 281 ELRPEDHEALAADLRLNMAAGRVERAWEVGRELLALRPEDRTLLADLARLGEWTGNGPQALGLWKQLLAGADDPALREHA 360
Cdd:COG2956 172 KLDPDCARALLLLAELYLEQGDYEEAIAALERALEQDPDYLPALPRLAELYEKLGDPEEALELLRKALELDPSDDLLLAL 251
|
250
....*....|....*..
gi 489547885 361 WRLSLQMFDFDSAIELL 377
Cdd:COG2956 252 ADLLERKEGLEAALALL 268
|
|
| PksD |
COG3321 |
Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites ... |
195-709 |
3.79e-08 |
|
Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 442550 [Multi-domain] Cd Length: 1386 Bit Score: 57.96 E-value: 3.79e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 195 PLPAADIQRQLAEAQTESAKRLAYLRQAFASLLAGE--RGEQAALLLDERLDALPEDESTLAWLAEGVRAAEGSQRYDLA 272
Cdd:COG3321 862 PLPTYPFQREDAAAALLAAALAAALAAAAALGALLLaaLAAALAAALLALAAAAAAALALAAAALAALLALVALAAAAAA 941
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 273 ERFIRRWRELRPEDHEALAADLRLNMAAGRVERAWEVGRELLALRPEDRTLLADLARLGEWTGNGPQALGLWKQLLAGAD 352
Cdd:COG3321 942 LLALAAAAAAAAAALAAAEAGALLLLAAAAAAAAAAAAAAAAAAAAAAAAAAAALAAAAALALLAAAALLLAAAAAAAAL 1021
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 353 DPALREHAWRLSLQMFDFDSAIELLAPIGAQRQMTDEELDALVYSHETRGTPEEGEAWLRGYVQRYPKQRLAWQRLQQIL 432
Cdd:COG3321 1022 LALAALLAAAAAALAAAAAAAAAAAALAALAAAAAAAAALALALAALLLLAALAELALAAAALALAAALAAAALALALAA 1101
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 433 EHTQQLQEETGVWARMARHFPLSVKERMQWAETHWNLFDPRQAWKVLAGVDTRAIREPEFWRLRAALAWALEQDDDARAA 512
Cdd:COG3321 1102 LAAALLLLALLAALALAAAAAALLALAALLAAAAAAAALAAAAAAAAALALAAAAAALAAALAAALLAAAALLLALALAL 1181
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 513 YERMLALDIRLNSSDEDQLIALYRDSNPKQALQVLIGSWQRSRDPRRLASALQLAENLHDWPALKSLLAEAEGLPEAQGS 592
Cdd:COG3321 1182 AAALAAALAGLAALLLAALLAALLAALLALALAALAAAAAALLAAAAAAAALALLALAAAAAAVAALAAAAAALLAALAA 1261
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 593 PyywvARARLAEQEGHGDVAERLYREALVRFPGENLVRERLLWFYIDRGRRDSLAPLLAQWHGLALRDSTLWLPFASASL 672
Cdd:COG3321 1262 L----ALLAAAAGLAALAAAAAAAAAALALAAAAAAAAAALAALLAAAAAAAAAAAAAAAAAALAAALLAAALAALAAAV 1337
|
490 500 510
....*....|....*....|....*....|....*..
gi 489547885 673 LLERNDQALAWFRLYLKSNPNDWLVQAAYADALDASG 709
Cdd:COG3321 1338 AAALALAAAAAAAAAAAAAAAAAAALAAAAGAAAAAA 1374
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
185-377 |
6.58e-08 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 56.93 E-value: 6.58e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 185 AARWYLASGEPLPAADIQRQLAEAQTESAKRLAYLRQAFASLLAGERGEQAALLLDERLDALPEDESTL---AWLAEGVR 261
Cdd:COG3914 7 LALAALAAAALLAAAAAAELALAAELEAAALAAALGLALLLLAALAEAAAAALLALAAGEAAAAAAALLllaALLELAAL 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 262 AAEGSQRYDLAERFIRRWRELRPEDHEALAADLRLNMAAGRVERAWEVGRELLALRPEDRTLLADLARLGEWTGNGPQAL 341
Cdd:COG3914 87 LLQALGRYEEALALYRRALALNPDNAEALFNLGNLLLALGRLEEALAALRRALALNPDFAEAYLNLGEALRRLGRLEEAI 166
|
170 180 190
....*....|....*....|....*....|....*..
gi 489547885 342 GLWKQLLAGA-DDPALREHAWRLSLQMFDFDSAIELL 377
Cdd:COG3914 167 AALRRALELDpDNAEALNNLGNALQDLGRLEEAIAAY 203
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
150-418 |
1.87e-07 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 53.96 E-value: 1.87e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 150 LARHALALDAPDLAARTFAELAGRDPQGRQRWLdEAARWYLASGEPLPAADIQRQLAEAQTESAkrLAYLRQAFASLLAG 229
Cdd:COG2956 14 KGLNYLLNGQPDKAIDLLEEALELDPETVEAHL-ALGNLYRRRGEYDRAIRIHQKLLERDPDRA--EALLELAQDYLKAG 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 230 ERgEQAALLLDERLDALPEDESTLAWLAEgvrAAEGSQRYDLAERFIRRWRELRPEDHEALAADLRLNMAAGRVERAWEV 309
Cdd:COG2956 91 LL-DRAEELLEKLLELDPDDAEALRLLAE---IYEQEGDWEKAIEVLERLLKLGPENAHAYCELAELYLEQGDYDEAIEA 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 310 GRELLALRPEDRTLLADLARLGEWTGNGPQALGLWKQLLA-GADDPALREHAWRLSLQMFDFDSAIELLAPIgAQRQMTD 388
Cdd:COG2956 167 LEKALKLDPDCARALLLLAELYLEQGDYEEAIAALERALEqDPDYLPALPRLAELYEKLGDPEEALELLRKA-LELDPSD 245
|
250 260 270
....*....|....*....|....*....|
gi 489547885 389 EELDALVYSHETRGTPEEGEAWLRGYVQRY 418
Cdd:COG2956 246 DLLLALADLLERKEGLEAALALLERQLRRH 275
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
61-349 |
3.83e-07 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 53.19 E-value: 3.83e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 61 LLQAHPENDALRLTLIDLLVKLGDFEQARHHLarlrgkdrlatpfyeveldilgalarpegmdeeqtRRLLERLRKIEHV 140
Cdd:COG2956 34 ALELDPETVEAHLALGNLYRRRGEYDRAIRIH-----------------------------------QKLLERDPDRAEA 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 141 slndamLERLARHALALDAPDLAARTFAELAGRDPQgRQRWLDEAARWYLASGEPLPAADIQRQLAEAQTESAKrlAYLR 220
Cdd:COG2956 79 ------LLELAQDYLKAGLLDRAEELLEKLLELDPD-DAEALRLLAEIYEQEGDWEKAIEVLERLLKLGPENAH--AYCE 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 221 QAFASLLAGERgEQAALLLDERLDALPEDESTLAWLAEgvrAAEGSQRYDLAERFIRRWRELRPEDHEALAADLRLNMAA 300
Cdd:COG2956 150 LAELYLEQGDY-DEAIEALEKALKLDPDCARALLLLAE---LYLEQGDYEEAIAALERALEQDPDYLPALPRLAELYEKL 225
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 489547885 301 GRVERAWEVGRELLALRPEDRTLLAdLARLGEWTGNGPQALGLWKQLLA 349
Cdd:COG2956 226 GDPEEALELLRKALELDPSDDLLLA-LADLLERKEGLEAALALLERQLR 273
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
234-357 |
1.01e-06 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 49.23 E-value: 1.01e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 234 QAALLLDERLDALPEDESTLAWLAegvRAAEGSQRYDLAERFIRRWRELRPEDHEALAADLRLNMAAGRVERAWEVGREL 313
Cdd:COG4235 1 EAIARLRQALAANPNDAEGWLLLG---RAYLRLGRYDEALAAYEKALRLDPDNADALLDLAEALLAAGDTEEAEELLERA 77
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 489547885 314 LALRPEDRTLLADLARLGEWTGNGPQALGLWKQLLAGADDPALR 357
Cdd:COG4235 78 LALDPDNPEALYLLGLAAFQQGDYAEAIAAWQKLLALLPADAPA 121
|
|
| PEP_TPR_lipo |
TIGR02917 |
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly ... |
62-748 |
1.83e-06 |
|
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.
Pssm-ID: 274350 [Multi-domain] Cd Length: 899 Bit Score: 52.39 E-value: 1.83e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 62 LQAHPENDALRLTLIDLLVKLGDFEQArhhlarlrgkdrlatpfyEVELDilgaLARPEGMDEEQTRRLlerlrkiehvs 141
Cdd:TIGR02917 49 LQKDPNDAEARFLLGKIYLALGDYAAA------------------EKELR----KALSLGYPKNQVLPL----------- 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 142 lndamlerLARHALALDAPDLAARTFAELAGRDPQGRQRWLDEAARWYLASGEPlpaADIQRQLAEAQTESAKRLAYLRQ 221
Cdd:TIGR02917 96 --------LARAYLLQGKFQQVLDELPGKTLLDDEGAAELLALRGLAYLGLGQL---ELAQKSYEQALAIDPRSLYAKLG 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 222 AFASLLAGERGEQAALLLDERLDALPEDESTLAWLAEGVRAAEGsqrYDLAERFIRRWRELRPEDHEALAADLRLNMAAG 301
Cdd:TIGR02917 165 LAQLALAENRFDEARALIDEVLTADPGNVDALLLKGDLLLSLGN---IELALAAYRKAIALRPNNIAVLLALATILIEAG 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 302 RVERAWEVGRELLALRPedrtlladlarlgewtgNGPQALGLWKQllagaddpalrehawrLSLQMFDFDSAIELLApig 381
Cdd:TIGR02917 242 EFEEAEKHADALLKKAP-----------------NSPLAHYLKAL----------------VDFQKKNYEDARETLQ--- 285
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 382 AQRQMTDEELDALVY---SHETRGTPEEGEAWLRGYVQRYPKQRLAWQRLQQILEHTQQLQEETGVWARMARHFPLSVKE 458
Cdd:TIGR02917 286 DALKSAPEYLPALLLagaSEYQLGNLEQAYQYLNQILKYAPNSHQARRLLASIQLRLGRVDEAIATLSPALGLDPDDPAA 365
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 459 RMQWAETHWNLFDPRQAWKVLAGVdtrAIREPEFWRLRAALAWALEQDDDARAAYermlaldirlnssdEDQLIALYRDS 538
Cdd:TIGR02917 366 LSLLGEAYLALGDFEKAAEYLAKA---TELDPENAAARTQLGISKLSQGDPSEAI--------------ADLETAAQLDP 428
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 539 NPKQALQVLIGSWQRSRDPRR-LASALQLAENLHDWPALKSLLAEA---EGLP-EAQGS--------PYYWVAR---ARL 602
Cdd:TIGR02917 429 ELGRADLLLILSYLRSGQFDKaLAAAKKLEKKQPDNASLHNLLGAIylgKGDLaKAREAfekalsiePDFFPAAanlARI 508
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 603 AEQEGHGDVAERLYREALVRFPGENLVRERLLWFYIDRGRRDSLAPLLAQWHGLALRDSTLWLPFASASLLLERNDQALA 682
Cdd:TIGR02917 509 DIQEGNPDDAIQRFEKVLTIDPKNLRAILALAGLYLRTGNEEEAVAWLEKAAELNPQEIEPALALAQYYLGKGQLKKALA 588
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 489547885 683 WFRLYLKSNPNDWLVQAAYADALDASGYQDKAlrlrrlllRRLDREAVRATPDSFAAYLRLLAVAQ 748
Cdd:TIGR02917 589 ILNEAADAAPDSPEAWLMLGRAQLAAGDLNKA--------VSSFKKLLALQPDSALALLLLADAYA 646
|
|
| PEP_TPR_lipo |
TIGR02917 |
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly ... |
52-714 |
5.28e-06 |
|
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.
Pssm-ID: 274350 [Multi-domain] Cd Length: 899 Bit Score: 50.85 E-value: 5.28e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 52 AVSVNYAELLLQAHPENDALRLTLIDLLVKLGDFEQARHHLarlrGKDRLATPFYEVELDILGALARPEGmDEEQTRRLL 131
Cdd:TIGR02917 278 EDARETLQDALKSAPEYLPALLLAGASEYQLGNLEQAYQYL----NQILKYAPNSHQARRLLASIQLRLG-RVDEAIATL 352
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 132 ERLrkIEHVSLNDAMLERLARHALALDAPDLAARTFAELAGRDPQGRQRWLdEAARWYLASGEPLPAadIQRQLAEAQTE 211
Cdd:TIGR02917 353 SPA--LGLDPDDPAALSLLGEAYLALGDFEKAAEYLAKATELDPENAAART-QLGISKLSQGDPSEA--IADLETAAQLD 427
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 212 SAKRLAYLRQAFASLLAGErgEQAALLLDERLDA-LPEDESTLAWLAEgvrAAEGSQRYDLAERFIRRWRELRPEDHEAL 290
Cdd:TIGR02917 428 PELGRADLLLILSYLRSGQ--FDKALAAAKKLEKkQPDNASLHNLLGA---IYLGKGDLAKAREAFEKALSIEPDFFPAA 502
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 291 AADLRLNMAAGRVERAWEVGRELLALRPEDRTLLADLARLGEWTGNGPQALGLWKQllAGADDPAlrehawrlslqmfdf 370
Cdd:TIGR02917 503 ANLARIDIQEGNPDDAIQRFEKVLTIDPKNLRAILALAGLYLRTGNEEEAVAWLEK--AAELNPQ--------------- 565
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 371 dsAIELLApigaqrqmtdeeldALVYSHETRGTPEEGEAWLRGYVQRYPKQRLAWQRLQQILEHTQQLQEETGVWARMAR 450
Cdd:TIGR02917 566 --EIEPAL--------------ALAQYYLGKGQLKKALAILNEAADAAPDSPEAWLMLGRAQLAAGDLNKAVSSFKKLLA 629
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 451 HFPLSVKERMQWAETHWNLFDPRQAWKVLagvdTRAI-REPEFWRLRAALAWALEQDDDARAAYErmLALDIRLNSSDED 529
Cdd:TIGR02917 630 LQPDSALALLLLADAYAVMKNYAKAITSL----KRALeLKPDNTEAQIGLAQLLLAAKRTESAKK--IAKSLQKQHPKAA 703
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 530 QLIAL-----YRDSNPKQALQVLigswqrsRDPRRLASALQLAENLHDWPALKSLLAEAEGLPEAQGS--PYYWVAR--- 599
Cdd:TIGR02917 704 LGFELegdlyLRQKDYPAAIQAY-------RKALKRAPSSQNAIKLHRALLASGNTAEAVKTLEAWLKthPNDAVLRtal 776
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 600 ARLAEQEGHGDVAERLYREALVRFPGENLVRERLLWFYidRGRRDSLAPLLAQwHGLALRDSTLWLPFASASLLLERND- 678
Cdd:TIGR02917 777 AELYLAQKDYDKAIKHYQTVVKKAPDNAVVLNNLAWLY--LELKDPRALEYAE-RALKLAPNIPAILDTLGWLLVEKGEa 853
|
650 660 670
....*....|....*....|....*....|....*..
gi 489547885 679 -QALAWFRLYLKSNPNDWLVQAAYADALDASGYQDKA 714
Cdd:TIGR02917 854 dRALPLLRKAVNIAPEAAAIRYHLALALLATGRKAEA 890
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
212-353 |
1.11e-05 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 46.34 E-value: 1.11e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 212 SAKRLAYLRQAFASLLAGeRGEQAALLLDERLDALPEDESTLAWLAEgvrAAEGSQRYDLAERFIRRWRELRPEDHEALA 291
Cdd:COG4783 1 AACAEALYALAQALLLAG-DYDEAEALLEKALELDPDNPEAFALLGE---ILLQLGDLDEAIVLLHEALELDPDEPEARL 76
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 489547885 292 ADLRLNMAAGRVERAWEVGRELLALRPEDRTLLADLARLGEWTGNGPQALGLWKQLLAGADD 353
Cdd:COG4783 77 NLGLALLKAGDYDEALALLEKALKLDPEHPEAYLRLARAYRALGRPDEAIAALEKALELDPD 138
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
369-622 |
1.24e-05 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 48.57 E-value: 1.24e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 369 DFDSAIELLAPIGAQRQMTDEELDALVYSHETRGTPEEGEAWLRGYVQRYPKQRLAWQRLQQILEHTQQLQEETGVWARM 448
Cdd:COG2956 23 QPDKAIDLLEEALELDPETVEAHLALGNLYRRRGEYDRAIRIHQKLLERDPDRAEALLELAQDYLKAGLLDRAEELLEKL 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 449 ARHFPLSVKERMQWAETHWNLFDPRQAWKVLAGVDTRAIREPEFWRLRAALAWALEQDDDARAAYERMLALDIRLNSSDE 528
Cdd:COG2956 103 LELDPDDAEALRLLAEIYEQEGDWEKAIEVLERLLKLGPENAHAYCELAELYLEQGDYDEAIEALEKALKLDPDCARALL 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 529 DQLIALYRDSNPKQALQVLIGSWQRsrDPRRLASALQLAENLHDWPALKSLLAEAEGLPEAQGSPYYWVARARLAEQEGH 608
Cdd:COG2956 183 LLAELYLEQGDYEEAIAALERALEQ--DPDYLPALPRLAELYEKLGDPEEALELLRKALELDPSDDLLLALADLLERKEG 260
|
250
....*....|....
gi 489547885 609 GDVAERLYREALVR 622
Cdd:COG2956 261 LEAALALLERQLRR 274
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
595-714 |
1.24e-05 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 46.34 E-value: 1.24e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 595 YWVARARLAEQEGHGDVAERLYREALVRFPGENLVRERLLWFYIDRGRRDSLAPLLAQWHGLALRDSTLWLPFASASLLL 674
Cdd:COG4783 6 ALYALAQALLLAGDYDEAEALLEKALELDPDNPEAFALLGEILLQLGDLDEAIVLLHEALELDPDEPEARLNLGLALLKA 85
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 489547885 675 ERNDQALAWFRLYLKSNPNDWLVQAAYADALDASGYQDKA 714
Cdd:COG4783 86 GDYDEALALLEKALKLDPEHPEAYLRLARAYRALGRPDEA 125
|
|
| HemYx |
COG3071 |
Uncharacterized protein HemY, contains HemY_N domain and TPR repeats (unrelated to ... |
83-376 |
2.80e-05 |
|
Uncharacterized protein HemY, contains HemY_N domain and TPR repeats (unrelated to protoporphyrinogen oxidase HemY) [Function unknown];
Pssm-ID: 442305 [Multi-domain] Cd Length: 323 Bit Score: 47.60 E-value: 2.80e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 83 GDFEQARHHLARLRGKDRLATPFYeveldILGALARPEGMDEEQTRRLLERLRKIEHvSLNDAMLERLARHALALDAPDL 162
Cdd:COG3071 30 GRYARAEKLLSKAAEHSEAPLLAY-----LLAARAAQALGDYERRDEYLAQALELAP-EAELAVLLTRAELLLDQGQAEQ 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 163 AARTFAELAGRDPQgRQRWLDEAARWYLASGEPLPAADIQRQLAEAQTESAKRL-AYLRQAFASLLAGERGEQAALLldE 241
Cdd:COG3071 104 ALATLEALRAGAPR-HPQVLRLLLQAYRQLGDWEELLELLPALRKHKALSAEEAqALERRAYLGLLRQAARDAEALK--A 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 242 RLDALPEDESTLAWL-AEGVRAAEGSQRYDLAERFIRRWRELRPedHEALAADLRlNMAAGRVERAWEVGRELLALRPED 320
Cdd:COG3071 181 LWKALPRAERRDPELaAAYARALIALGDHDEAERLLREALKRQW--DPRLVRLYG-RLQGGDPAKQLKRAEKWLKKHPND 257
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 321 RTLLADLARL----GEWtgngPQALGLWKQLLAGADDPALREHAWRLSLQMFDFDSAIEL 376
Cdd:COG3071 258 PDLLLALGRLclrnQLW----GKAREYLEAALALRPSAEAYAELARLLEQLGDPEEAAEH 313
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
298-547 |
8.09e-05 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 45.88 E-value: 8.09e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 298 MAAGRVERAWEVGRELLALRPEDRTLLADLARLGEWTGNGPQALGLWKQLLAGADD--PALREHAwRLSLQMFDFDSAIE 375
Cdd:COG2956 19 LLNGQPDKAIDLLEEALELDPETVEAHLALGNLYRRRGEYDRAIRIHQKLLERDPDraEALLELA-QDYLKAGLLDRAEE 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 376 LLAPIGAQRQMTDEELDALVYSHETRGTPEEGEAWLRGYVQRYPKQRLAWQRLQQILEHTQQLQEETGVWARMARHFPLS 455
Cdd:COG2956 98 LLEKLLELDPDDAEALRLLAEIYEQEGDWEKAIEVLERLLKLGPENAHAYCELAELYLEQGDYDEAIEALEKALKLDPDC 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 456 VKERMQWAETHWNLFDPRQAWKVLAGVDTRAIREPEFWRLRAALAWALEQDDDARAAYERMLALDIrlNSSDEDQLIALY 535
Cdd:COG2956 178 ARALLLLAELYLEQGDYEEAIAALERALEQDPDYLPALPRLAELYEKLGDPEEALELLRKALELDP--SDDLLLALADLL 255
|
250
....*....|...
gi 489547885 536 -RDSNPKQALQVL 547
Cdd:COG2956 256 eRKEGLEAALALL 268
|
|
| HemYx |
COG3071 |
Uncharacterized protein HemY, contains HemY_N domain and TPR repeats (unrelated to ... |
57-353 |
1.22e-04 |
|
Uncharacterized protein HemY, contains HemY_N domain and TPR repeats (unrelated to protoporphyrinogen oxidase HemY) [Function unknown];
Pssm-ID: 442305 [Multi-domain] Cd Length: 323 Bit Score: 45.67 E-value: 1.22e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 57 YAELLLQAHPEND-ALRLTLIDLLVKLGDFEQARHHLARLRGKDRLATPFYEVELDILGALARPEGMDEeqtrrLLERLR 135
Cdd:COG3071 72 YLAQALELAPEAElAVLLTRAELLLDQGQAEQALATLEALRAGAPRHPQVLRLLLQAYRQLGDWEELLE-----LLPALR 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 136 KieHVSLNDAMLERLARHAlaldapdlAARTFAELAGRDPQGRQRWLDeaarwylasgepLPAADiqrqlaeaqtesaKR 215
Cdd:COG3071 147 K--HKALSAEEAQALERRA--------YLGLLRQAARDAEALKALWKA------------LPRAE-------------RR 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 216 LAYLRQAFAS-LLAGERGEQAALLLDERLDALPEDEstLAWLAEGVRAAEGSQRYDLAErfirRWRELRPEDHEALAADL 294
Cdd:COG3071 192 DPELAAAYARaLIALGDHDEAERLLREALKRQWDPR--LVRLYGRLQGGDPAKQLKRAE----KWLKKHPNDPDLLLALG 265
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 489547885 295 RLNMAAGRVERAWEVGRELLALRPEDRTLLAdLARLGEWTGNGPQALGLWKQLLAGADD 353
Cdd:COG3071 266 RLCLRNQLWGKAREYLEAALALRPSAEAYAE-LARLLEQLGDPEEAAEHYRKALALALG 323
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
261-378 |
2.43e-04 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 42.49 E-value: 2.43e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 261 RAAEGSQRYDLAERFIRRWRELRPEDHEALAADLRLNMAAGRVERAWEVGRELLALRPEDRTLLADLARLGEWTGNGPQA 340
Cdd:COG4783 12 QALLLAGDYDEAEALLEKALELDPDNPEAFALLGEILLQLGDLDEAIVLLHEALELDPDEPEARLNLGLALLKAGDYDEA 91
|
90 100 110
....*....|....*....|....*....|....*....
gi 489547885 341 LGLWKQLLA-GADDPALREHAWRLSLQMFDFDSAIELLA 378
Cdd:COG4783 92 LALLEKALKlDPEHPEAYLRLARAYRALGRPDEAIAALE 130
|
|
| PRK11447 |
PRK11447 |
cellulose synthase subunit BcsC; Provisional |
143-621 |
3.80e-04 |
|
cellulose synthase subunit BcsC; Provisional
Pssm-ID: 183140 [Multi-domain] Cd Length: 1157 Bit Score: 44.69 E-value: 3.80e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 143 NDAMLERLARHALALDAPDLAARTFAELAgRDPQGR----QRWLDE----------AARW--YLA---SGEPLPAA---- 199
Cdd:PRK11447 180 NTGLRNTLALLLFSSGRRDEGFAVLEQMA-KSPAGRdaaaQLWYGQikdmpvsdasVAALqkYLQvfsDGDSVAAArsql 258
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 200 -DIQRQLAE----------AQTES---AKRLAYLRQAF------ASLL---------AGERGE-----QAALLLDERLDA 245
Cdd:PRK11447 259 aEQQKQLADpafraraqglAAVDSgqgGKAIPELQQAVranpkdSEALgalgqaysqQGDRARavaqfEKALALDPHSSN 338
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 246 LPEDESTLA----WLA--EGVRAAEgSQRYDLAERFIRRWRELRPEDHEALAADLRLNMAAGRVERAWEVGRELLALRPE 319
Cdd:PRK11447 339 RDKWESLLKvnryWLLiqQGDAALK-ANNLAQAERLYQQARQVDNTDSYAVLGLGDVAMARKDYAAAERYYQQALRMDPG 417
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 320 DRTLLADLARLgeWTGNGPQALGLWKQLLAGADDPALREhaWRLSLQMFDFDSAIELLAPIGAQRQMTDeeldalVYSHE 399
Cdd:PRK11447 418 NTNAVRGLANL--YRQQSPEKALAFIASLSASQRRSIDD--IERSLQNDRLAQQAEALENQGKWAQAAE------LQRQR 487
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 400 TRGTPeeGEAWLRgyvqrypkqrlawQRLQQILEHTQQLQEETGVWARMARHFP------------LSVKERMQWAETHW 467
Cdd:PRK11447 488 LALDP--GSVWLT-------------YRLAQDLRQAGQRSQADALMRRLAQQKPndpeqvyayglyLSGSDRDRAALAHL 552
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 468 NLFdPRQAW--------------KVLA--------GVDTRAI----REPEFWRLRAALA-WALEQDD--DARAAYERMLA 518
Cdd:PRK11447 553 NTL-PRAQWnsniqelaqrlqsdQVLEtanrlrdsGKEAEAEallrQQPPSTRIDLTLAdWAQQRGDyaAARAAYQRVLT 631
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 519 L-----DIRLNSSDedQLIALYRDSNPKQALQVLIGSWQRSRDP-RRLASA-LQLAENLHDWPALKSLLAEAEGLPEAQG 591
Cdd:PRK11447 632 RepgnaDARLGLIE--VDIAQGDLAAARAQLAKLPATANDSLNTqRRVALAwAALGDTAAAQRTFNRLIPQAKSQPPSME 709
|
570 580 590
....*....|....*....|....*....|
gi 489547885 592 SPYYWVARARLAEQEGHGDVAERLYREALV 621
Cdd:PRK11447 710 SALVLRDAARFEAQTGQPQQALETYKDAMV 739
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
186-396 |
7.40e-04 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 42.69 E-value: 7.40e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 186 ARWYLASGEPLPAADIQRQLAEAQTESAKRLAYLRQAFASLlagERGEQAALLLDERLDALPEDESTLAWLAegvRAAEG 265
Cdd:COG0457 15 GLAYRRLGRYEEAIEDYEKALELDPDDAEALYNLGLAYLRL---GRYEEALADYEQALELDPDDAEALNNLG---LALQA 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 266 SQRYDLAERFIRRWRELRPEDHEALAADLRLNMAAGRVERAWEVGRELLALRPEDRTLLADLARLGEWTGNGPQALGLWK 345
Cdd:COG0457 89 LGRYEEALEDYDKALELDPDDAEALYNLGLALLELGRYDEAIEAYERALELDPDDADALYNLGIALEKLGRYEEALELLE 168
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 489547885 346 QLLAGADDPALREHAWRLSLQMFDFDSAIELLAPIGAQRQMTDEELDALVY 396
Cdd:COG0457 169 KLEAAALAALLAAALGEAALALAAAEVLLALLLALEQALRKKLAILTLAAL 219
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
551-743 |
1.04e-03 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 43.44 E-value: 1.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 551 WQRSRDPRRLASALQLAENLHDwpALKSLLAEAEGLPEAQGSPYYWVARARLAEQEGHGDVAERLYREALVRFPGENLVR 630
Cdd:COG3914 4 AALLALAALAAAALLAAAAAAE--LALAAELEAAALAAALGLALLLLAALAEAAAAALLALAAGEAAAAAAALLLLAALL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 631 ERLLWFYIDRGRRDSLAPLLAQWHGLALRDSTLWLPFASASLLLERNDQALAWFRLYLKSNPNDWLVQAAYADALDASGY 710
Cdd:COG3914 82 ELAALLLQALGRYEEALALYRRALALNPDNAEALFNLGNLLLALGRLEEALAALRRALALNPDFAEAYLNLGEALRRLGR 161
|
170 180 190
....*....|....*....|....*....|...
gi 489547885 711 QDKAlrlrrlllRRLDREAVRATPDSFAAYLRL 743
Cdd:COG3914 162 LEEA--------IAALRRALELDPDNAEALNNL 186
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
420-712 |
1.14e-03 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 43.06 E-value: 1.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 420 KQRLAWQRLQQILEHTQQLQEETGVWARMARHFPLSVKERMQWAETHWNLFDPRQAWKVLAGVDTRAIREPEFWRLRAAL 499
Cdd:COG3914 8 ALAALAAAALLAAAAAAELALAAELEAAALAAALGLALLLLAALAEAAAAALLALAAGEAAAAAAALLLLAALLELAALL 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 500 AWALEQDDDARAAYERMLALdirlnssDEDQLIALYRDSNpkqALQVLigswqrsrdpRRLASALQlaenlhdwpALKSL 579
Cdd:COG3914 88 LQALGRYEEALALYRRALAL-------NPDNAEALFNLGN---LLLAL----------GRLEEALA---------ALRRA 138
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 580 LAEAEGLPEAqgspyyWVARARLAEQEGHGDVAERLYREALVRFPGENLVRERLLWFYIDRGRRD----------SLAPL 649
Cdd:COG3914 139 LALNPDFAEA------YLNLGEALRRLGRLEEAIAALRRALELDPDNAEALNNLGNALQDLGRLEeaiaayrralELDPD 212
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 489547885 650 LAQWHGLALR------DSTLWLPFASASLLLERNDQALAWFRL-YLKSNPNDWLVQAA--YADALDASGYQD 712
Cdd:COG3914 213 NADAHSNLLFalrqacDWEVYDRFEELLAALARGPSELSPFALlYLPDDDPAELLALAraWAQLVAAAAAPE 284
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
211-435 |
1.90e-03 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 42.29 E-value: 1.90e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 211 ESAKRLAYLRQAFASLLAGERGEQAALLLDERLDALPEDESTLAWLAEGVRAAEGSQRYDLAERFIRRWRELRPEDHEAL 290
Cdd:COG3914 2 AAAALLALAALAAAALLAAAAAAELALAAELEAAALAAALGLALLLLAALAEAAAAALLALAAGEAAAAAAALLLLAALL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 291 AADLRLNMAAGRVERAWEVGRELLALRPEDRTLLADLARLGEWTGNGPQALGLWKQLLagADDPALREHAWRLSLQMFDF 370
Cdd:COG3914 82 ELAALLLQALGRYEEALALYRRALALNPDNAEALFNLGNLLLALGRLEEALAALRRAL--ALNPDFAEAYLNLGEALRRL 159
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 489547885 371 DSAIELLAPIGAQRQMTDEELDA---LVYSHETRGTPEEGEAWLRGYVQRYPKQRLAWQRLQQILEHT 435
Cdd:COG3914 160 GRLEEAIAALRRALELDPDNAEAlnnLGNALQDLGRLEEAIAAYRRALELDPDNADAHSNLLFALRQA 227
|
|
| TadD |
COG5010 |
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
202-349 |
2.37e-03 |
|
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444034 [Multi-domain] Cd Length: 155 Bit Score: 39.94 E-value: 2.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 202 QRQLAEAQTESAKRLAYLRQAFASLLAGERGEQAALLLDERLDALPEDESTLAWLAEGVRAAEGSQRYDLAERFIRRWRE 281
Cdd:COG5010 3 ALEGFDRLPLYLLLLTKLRTLVEKYEAALAGANNTKEDELAAAGRDKLAKAFAIESPSDNLYNKLGDFEESLALLEQALQ 82
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 489547885 282 LRPEDHEALAADLRLNMAAGRVERAWEVGRELLALRPEDRTLLADLARLGEWTGNGPQALGLWKQLLA 349
Cdd:COG5010 83 LDPNNPELYYNLALLYSRSGDKDEAKEYYEKALALSPDNPNAYSNLAALLLSLGQDDEAKAALQRALG 150
|
|
| COG3899 |
COG3899 |
Predicted ATPase [General function prediction only]; |
147-681 |
2.93e-03 |
|
Predicted ATPase [General function prediction only];
Pssm-ID: 443106 [Multi-domain] Cd Length: 1244 Bit Score: 42.15 E-value: 2.93e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 147 LERLARHALALDAPDLAARTF---AELAGRDPQGRQR--WLDEAARWYLASGEPLPAADIQRQLAEAQTESAkrLAYLRQ 221
Cdd:COG3899 708 LLRAARRALARGAYAEALRYLeraLELLPPDPEEEYRlaLLLELAEALYLAGRFEEAEALLERALAARALAA--LAALRH 785
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 222 AFASLLAGERGEQAALLLDERLDALPEDESTLAwLAEGVRAAEGSQRYDLAERFIRRWRELRPEDHEALAADLRLNMAAG 301
Cdd:COG3899 786 GNPPASARAYANLGLLLLGDYEEAYEFGELALA-LAERLGDRRLEARALFNLGFILHWLGPLREALELLREALEAGLETG 864
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 302 RVERAWEVGRELLALRPEDRTLLADLARLGEWTGNGPQALGLWKQLLAGADDPALREHAWRLSLQMFDFDSAIELLAPIG 381
Cdd:COG3899 865 DAALALLALAAAAAAAAAAAALAAAAAAAARLLAAAAAALAAAAAAAALAAAELARLAAAAAAAAALALAAAAAAAAAAA 944
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 382 AQRQMTDEELDALVYSHETRGTPEEGEAWLRGYVQRYPKQRLAWQRLQQILEHTQQLQEETGVWARMARHFPLSVKERMQ 461
Cdd:COG3899 945 LAAAAAAAALAAALALAAAAAAAAAAALAAAAAAAAAAAAAAAAAALEAAAAALLALLAAAAAAAAAAAALAAALLAAAL 1024
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 462 WAETHWNLFDPRQAWKVLAGVDTRAIREPEFWRLRAALAWALEQDDDARAAYERMLALDIRLNSSDEDQLIALYRDSNPK 541
Cdd:COG3899 1025 AALAAAAAAAALLAAAAALALLAALAAAAAAAAAAAALAAAAALLAAAAAAAAAAAAAAAAAALAAALAAAALAAAAAAA 1104
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 542 QALQVLIGSWQRSRDPRRLASALQLAENLHDWPALKSLLAEAEGLPEAQGSPYYWVARARLAEQEGHGDVAERLYREALV 621
Cdd:COG3899 1105 LALAAALAALALAAALAALALAAAARAAAALLLLAAALALALAALLLLAALLLALALLLLALAALALAAALAALAAALLA 1184
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 622 RFPGENLVRERLLWFYIDRGRRDSLAPLLAQWHGLALRDSTLWLPFASASLLLERNDQAL 681
Cdd:COG3899 1185 AAAAAAAAAALLAALLALAARLAALLALALLALEAAALLLLLLLAALALAAALLALRLLA 1244
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
591-795 |
2.95e-03 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 40.76 E-value: 2.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 591 GSPYYWVARARLAEQEGHGDVAERLYREALVRFPGENLVRERLLWFYIDRGRRDSLAPLLAQWHGLALRDSTLWLPFASA 670
Cdd:COG0457 40 DDAEALYNLGLAYLRLGRYEEALADYEQALELDPDDAEALNNLGLALQALGRYEEALEDYDKALELDPDDAEALYNLGLA 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 671 SLLLERNDQALAWFRLYLKSNPNDWLVQAAYADALDASGYQDKALRLRRLLLRRLDREAVRATPDSFAAYLRLLAVAQGP 750
Cdd:COG0457 120 LLELGRYDEAIEAYERALELDPDDADALYNLGIALEKLGRYEEALELLEKLEAAALAALLAAALGEAALALAAAEVLLAL 199
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 489547885 751 LLAQGEARRAWNGEPAMLQLWFEQFLDQLAATNQEPLKDDWLAWA 795
Cdd:COG0457 200 LLALEQALRKKLAILTLAALAELLLLALALLLALRLAALALYQYR 244
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
176-320 |
3.73e-03 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 39.02 E-value: 3.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 176 QGRQRWLDEAARWYLASGEPLPAADIQRQLAEAQTESAKRLAYLRQAfasLLAGERGEQAALLLDERLDALPEDESTLAW 255
Cdd:COG4783 1 AACAEALYALAQALLLAGDYDEAEALLEKALELDPDNPEAFALLGEI---LLQLGDLDEAIVLLHEALELDPDEPEARLN 77
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 489547885 256 LAegvRAAEGSQRYDLAERFIRRWRELRPEDHEALAADLRLNMAAGRVERAWEVGRELLALRPED 320
Cdd:COG4783 78 LG---LALLKAGDYDEALALLEKALKLDPEHPEAYLRLARAYRALGRPDEAIAALEKALELDPDD 139
|
|
| PRK11447 |
PRK11447 |
cellulose synthase subunit BcsC; Provisional |
248-363 |
5.50e-03 |
|
cellulose synthase subunit BcsC; Provisional
Pssm-ID: 183140 [Multi-domain] Cd Length: 1157 Bit Score: 41.22 E-value: 5.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 248 EDESTLAWLAEGVRAAEGSQRYDLAERFIRRWRELRPEDHEALAADLRL-----NMAAGRVE-----------RAWEVGR 311
Cdd:PRK11447 23 AAPTAQQQLLEQVRLGEATHREDLVRQSLYRLELIDPNNPDVIAARFRLllrqgDSDGAQKLldrlsqlapdsNAYRSSR 102
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 489547885 312 ELLAL-RPEDRTLLaDLARLGEWTGNGPQALGLWKQLLAGA-DDPALREHAWRL 363
Cdd:PRK11447 103 TTMLLsTPEGRQAL-QQARLLATTGRTEEALASYDKLFNGApPELDLAVEYWRL 155
|
|
| FepA |
COG4771 |
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ... |
908-1075 |
6.20e-03 |
|
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];
Pssm-ID: 443803 [Multi-domain] Cd Length: 612 Bit Score: 40.61 E-value: 6.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 908 GDDWYADLELGSGRYHGDALDSSLLGSERN----ARLTLRRELADGFAAATLDGSWRDDEDRHGLGLLR-NWRLSSRDEL 982
Cdd:COG4771 157 TDELEGSVSLGYGSNGNGTYSGSLSLGGPGdklsFLLSGSYRDRDGYLDYRNGGFVGNSGYERYNLNAKlGYRLSDNHRL 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 983 EAGLDWHRETDETGLMRALGM---------------RDSLRLGGRHTLSgrDQLSWSLAHNRFSTRQGDDLGNGEA---- 1043
Cdd:COG4771 237 SLSGGYSRQDRDGGPPTLGDTeissdnagdrdtttdRGNYSLRYNGDLG--DNLDLSLYYSRTDRDSTNGSLGGSTgsfs 314
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 489547885 1044 --------LSLEWAHTLffdGPAWQLRGGIDYQRNRLENR 1075
Cdd:COG4771 315 dsddttygLELDLTYPL---GGNHTLTLGAEYRYDDLDSS 351
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
199-443 |
8.51e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 40.32 E-value: 8.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 199 ADIQRQLAEAQTESakrLAYlRQAFASLLAGERGEQAALL----LDERLDALPEDESTLAwlaEGVRAAEgsQRYDLAER 274
Cdd:COG3096 399 ADYQQALDVQQTRA---IQY-QQAVQALEKARALCGLPDLtpenAEDYLAAFRAKEQQAT---EEVLELE--QKLSVADA 469
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 275 FIRRWRElrpedheALAAdlrLNMAAGRVER--AWEVGRELLALRPEDRTLLADLARLGewtgngpQALGLWKQLLAGAD 352
Cdd:COG3096 470 ARRQFEK-------AYEL---VCKIAGEVERsqAWQTARELLRRYRSQQALAQRLQQLR-------AQLAELEQRLRQQQ 532
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 353 DpaLREHAWRLSLQM-FDFDSAIELLAPIGAQRQMTDEELDALVYSHETRGTPEEGEAWLRGYVQRYPKQRLAWQRLQQI 431
Cdd:COG3096 533 N--AERLLEEFCQRIgQQLDAAEELEELLAELEAQLEELEEQAAEAVEQRSELRQQLEQLRARIKELAARAPAWLAAQDA 610
|
250
....*....|..
gi 489547885 432 LEHtqqLQEETG 443
Cdd:COG3096 611 LER---LREQSG 619
|
|
| COG3899 |
COG3899 |
Predicted ATPase [General function prediction only]; |
147-688 |
8.58e-03 |
|
Predicted ATPase [General function prediction only];
Pssm-ID: 443106 [Multi-domain] Cd Length: 1244 Bit Score: 40.61 E-value: 8.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 147 LERLARHALALDAPDLAARtFAELAGRDPQGRQRWlDEAARWY---LASGEPLPAADIQRQLAEAQTESAKRLAYLRQAF 223
Cdd:COG3899 688 LFELAHHLNRAGERDRAAR-LLLRAARRALARGAY-AEALRYLeraLELLPPDPEEEYRLALLLELAEALYLAGRFEEAE 765
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 224 ASLLAGERGEQAALLLDERLDALPEDESTLAWLAEGVR------AAEGSQRYDLAERFIRRWRELRpedheALAADLRLN 297
Cdd:COG3899 766 ALLERALAARALAALAALRHGNPPASARAYANLGLLLLgdyeeaYEFGELALALAERLGDRRLEAR-----ALFNLGFIL 840
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 298 MAAGRVERAWEVGRELLALRPEDRTLLADLARLGEWTGNGPQALGLWKQLLAGADDPALREHAWRLSLQMFDFDSAIELL 377
Cdd:COG3899 841 HWLGPLREALELLREALEAGLETGDAALALLALAAAAAAAAAAAALAAAAAAAARLLAAAAAALAAAAAAAALAAAELAR 920
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 378 APIGAQRQMTDEELDALVYSHETRGTPEEGEAWLRGYVQRYPKQRLAWQRLQQILEHTQQLQEETGVWARMARHFPLSVK 457
Cdd:COG3899 921 LAAAAAAAAALALAAAAAAAAAAALAAAAAAAALAAALALAAAAAAAAAAALAAAAAAAAAAAAAAAAAALEAAAAALLA 1000
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 458 ERMQWAETHWNLFDPRQAWKVLAGVDTRAIREPEFWRLRAALAWALEQDDDARAAYERMLALDIRLNSSDEDQLIALYRD 537
Cdd:COG3899 1001 LLAAAAAAAAAAAALAAALLAAALAALAAAAAAAALLAAAAALALLAALAAAAAAAAAAAALAAAAALLAAAAAAAAAAA 1080
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489547885 538 SNPKQALQVLIGSWQRSRDPRRLASALQLAENLHDWPALKSLLAEAEGLPEAQGSPYYWVARARLAEQEGHGDVAERLYR 617
Cdd:COG3899 1081 AAAAAAALAAALAAAALAAAAAAALALAAALAALALAAALAALALAAAARAAAALLLLAAALALALAALLLLAALLLALA 1160
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 489547885 618 EALVRFPGENLVRERLLWFYIDRGRRDSLAPLLAQWHGLALRDSTLWLPFASASLLLERNDQALAWFRLYL 688
Cdd:COG3899 1161 LLLLALAALALAAALAALAAALLAAAAAAAAAAALLAALLALAARLAALLALALLALEAAALLLLLLLAAL 1231
|
|
| |
