NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|489484754|ref|WP_003389730|]
View 

MULTISPECIES: DUF3055 domain-containing protein [Brevibacillus]

Protein Classification

DUF3055 domain-containing protein( domain architecture ID 10567953)

uncharacterized DUF3055 domain-containing protein

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
DUF3055 pfam11256
Protein of unknown function (DUF3055); This family of proteins with unknown function appear to ...
 8-85 1.77e-43

Protein of unknown function (DUF3055); This family of proteins with unknown function appear to be restricted to Firmicutes.


:

Pssm-ID: 431763  Cd Length: 80  Bit Score: 135.78  E-value: 1.77e-43
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 489484754   8 LYDESEETKTRFVSFMAESTRFDLAIMTTNRFYGKKLVINIQNGRSAIIGSDDLEEEGYLEFAFNLNETEAAELKAFL 85
Cdd:pfam11256  1 LYDETEETKTRFVGFTGESQRFDLAIVYTNRFYGKPLVLCMQTGRSAIIGPDDLEEPGYLEHAFGLSEEEAEELREFL 78
 
Name Accession Description Interval E-value
DUF3055 pfam11256
Protein of unknown function (DUF3055); This family of proteins with unknown function appear to ...
 8-85 1.77e-43

Protein of unknown function (DUF3055); This family of proteins with unknown function appear to be restricted to Firmicutes.


Pssm-ID: 431763  Cd Length: 80  Bit Score: 135.78  E-value: 1.77e-43
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 489484754   8 LYDESEETKTRFVSFMAESTRFDLAIMTTNRFYGKKLVINIQNGRSAIIGSDDLEEEGYLEFAFNLNETEAAELKAFL 85
Cdd:pfam11256  1 LYDETEETKTRFVGFTGESQRFDLAIVYTNRFYGKPLVLCMQTGRSAIIGPDDLEEPGYLEHAFGLSEEEAEELREFL 78
 
Name Accession Description Interval E-value
DUF3055 pfam11256
Protein of unknown function (DUF3055); This family of proteins with unknown function appear to ...
 8-85 1.77e-43

Protein of unknown function (DUF3055); This family of proteins with unknown function appear to be restricted to Firmicutes.


Pssm-ID: 431763  Cd Length: 80  Bit Score: 135.78  E-value: 1.77e-43
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 489484754   8 LYDESEETKTRFVSFMAESTRFDLAIMTTNRFYGKKLVINIQNGRSAIIGSDDLEEEGYLEFAFNLNETEAAELKAFL 85
Cdd:pfam11256  1 LYDETEETKTRFVGFTGESQRFDLAIVYTNRFYGKPLVLCMQTGRSAIIGPDDLEEPGYLEHAFGLSEEEAEELREFL 78
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH