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Conserved domains on  [gi|489409964|ref|WP_003315956|]
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MULTISPECIES: F0F1 ATP synthase subunit delta [Pseudomonas]

Protein Classification

FoF1 ATP synthase subunit delta( domain architecture ID 10012586)

F0F1 ATP synthase subunit delta is part of the catalytic core of the F-type ATPase that produces ATP from ADP in the presence of a proton gradient across the membrane

Gene Ontology:  GO:0046933|GO:0015986|GO:0045261
PubMed:  30901262
SCOP:  3000714

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
PRK05758 PRK05758
F0F1 ATP synthase subunit delta; Validated
 1-178 7.15e-76

F0F1 ATP synthase subunit delta; Validated


:

Pssm-ID: 235593  Cd Length: 177  Bit Score: 224.67  E-value: 7.15e-76
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489409964   1 MAELTTLARPYAKAAFEHAQAHQQLANWSAMLGLAAAVSQDDTMQRMLKAPRLTSAQKATtFIEVCGEKFDAKAQNFIHV 80
Cdd:PRK05758   1 MSELSTVARPYAKALFEVALEKGSLDAWSEELTFLAEVAENEDLAALLSSPLVSAEQKKK-LLAAVFKSLSEYVQNFLKV 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489409964  81 VAENDRLPLLPEIAELFDLYKAEQEKSVDVDVTSAFALNQEQQDKLAKVLSARLGREVRLHAAEDASLIGGVVIRAGDLV 160
Cdd:PRK05758  80 LAENGRLALLPEILEQFEALRAEHENIVDAEVTSAFPLSEEQLDKLKAALEKRLGRKVKLNEKVDPSLIGGVIIKVGDRV 159

                        170
                 ....*....|....*...
gi 489409964 161 IDGSVRGKIAKLAEALKS 178
Cdd:PRK05758 160 IDGSVRGKLERLKDALKS 177
 
Name Accession Description Interval E-value
PRK05758 PRK05758
F0F1 ATP synthase subunit delta; Validated
 1-178 7.15e-76

F0F1 ATP synthase subunit delta; Validated


Pssm-ID: 235593  Cd Length: 177  Bit Score: 224.67  E-value: 7.15e-76
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489409964   1 MAELTTLARPYAKAAFEHAQAHQQLANWSAMLGLAAAVSQDDTMQRMLKAPRLTSAQKATtFIEVCGEKFDAKAQNFIHV 80
Cdd:PRK05758   1 MSELSTVARPYAKALFEVALEKGSLDAWSEELTFLAEVAENEDLAALLSSPLVSAEQKKK-LLAAVFKSLSEYVQNFLKV 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489409964  81 VAENDRLPLLPEIAELFDLYKAEQEKSVDVDVTSAFALNQEQQDKLAKVLSARLGREVRLHAAEDASLIGGVVIRAGDLV 160
Cdd:PRK05758  80 LAENGRLALLPEILEQFEALRAEHENIVDAEVTSAFPLSEEQLDKLKAALEKRLGRKVKLNEKVDPSLIGGVIIKVGDRV 159

                        170
                 ....*....|....*...
gi 489409964 161 IDGSVRGKIAKLAEALKS 178
Cdd:PRK05758 160 IDGSVRGKLERLKDALKS 177
AtpH COG0712
FoF1-type ATP synthase, delta subunit [Energy production and conversion]; FoF1-type ATP ...
 1-178 2.76e-64

FoF1-type ATP synthase, delta subunit [Energy production and conversion]; FoF1-type ATP synthase, delta subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440476  Cd Length: 178  Bit Score: 195.38  E-value: 2.76e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489409964   1 MAeLTTLARPYAKAAFEHAQAHQQLANWSAMLG-LAAAVSQDDTMQRMLKAPRLTSAQKATTFIEVCGEKFDAKAQNFIH 79
Cdd:COG0712    1 MA-LSTIARRYAKALFELAKEKGALDEVEEELFaLAALLAENPELRALLSSPVISAEEKKELLEALFGGKLSPETLNFLK 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489409964  80 VVAENDRLPLLPEIAELFDLYKAEQEKSVDVDVTSAFALNQEQQDKLAKVLSARLGREVRLHAAEDASLIGGVVIRAGDL 159
Cdd:COG0712   80 LLVENGRLALLPEIAEEFEELAAERRGIVVAEVTSAVPLSEEQLERLAAALEKKTGKKVELNVKVDPSLIGGVVVRVGDK 159

                        170
                 ....*....|....*....
gi 489409964 160 VIDGSVRGKIAKLAEALKS 178
Cdd:COG0712  160 VIDGSVRGRLNRLRRALKG 178
OSCP pfam00213
ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP ...
 7-176 8.50e-60

ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP subunit which is this family. The ATP D subunit from metazoa are found in family pfam00401.


Pssm-ID: 459714  Cd Length: 172  Bit Score: 183.88  E-value: 8.50e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489409964    7 LARPYAKAAFEHAQAHQQLANWSAMLG-LAAAVSQDDTMQRMLKAPRLTSAQKATTFIEVCGEKFDAKAQNFIHVVAEND 85
Cdd:pfam00213   1 IARRYAKALFELAKEKGKLDQVEEELEaLEAALAENPDLAAFLSNPTISAEEKKALLLELFKGLLSPLTLNFLKLLAENG 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489409964   86 RLPLLPEIAELFDLYKAEQEKSVDVDVTSAFALNQEQQDKLAKVLSARLGR-EVRLHAAEDASLIGGVVIRAGDLVIDGS 164
Cdd:pfam00213  81 RLGLLPEIAEEFEELLDEARGIVEAEVTSAVPLSEEQLEKLAAALEKKTGKkKVKLENKVDPSLIGGVVVRVGDKVIDGS 160

                         170
                  ....*....|..
gi 489409964  165 VRGKIAKLAEAL 176
Cdd:pfam00213 161 VKGKLERLKRAL 172
ATP_synt_delta TIGR01145
ATP synthase, F1 delta subunit; This model describes the ATP synthase delta subunit in ...
 8-176 6.64e-44

ATP synthase, F1 delta subunit; This model describes the ATP synthase delta subunit in bacteria, mitochondria, and chloroplasts. It is sometimes called OSCP for Oligomycin Sensitivity Conferring Protein. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Delta subunit belongs to the F1 cluster or sector and functionally implicated in the overall stability of the complex. Expression of truncated forms of this subunit results in low ATPase activity. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 130215 [Multi-domain]  Cd Length: 172  Bit Score: 143.22  E-value: 6.64e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489409964    8 ARPYAKAAFEHAQAHQQLANWSAMLGLAAAVSQDD-TMQRMLKAPRLTSAQKATTFIEVCGEKFDAKAQNFIHVVAENDR 86
Cdd:TIGR01145   2 ARPYAKALFEIANEKSSLEEWGEMLNFVKEVLKNNkELKKFLSNPLISAEKKKEFIKNVFGEQLDESSLNLLLLLAENGR 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489409964   87 LPLLPEIAELFDLYKAEQEKSVDVDVTSAFALNQEQQDKLAKVLSARLGRE-VRLHAAEDASLIGGVVIRAGDLVIDGSV 165
Cdd:TIGR01145  82 LAALPDILDQFLKLSYEAQQTADVEVISAKPLTEDQQAKIAEKLEKITGAAkVKLNCKVDKDLIGGVIIRIGDRVIDGSV 161

                         170
                  ....*....|.
gi 489409964  166 RGKIAKLAEAL 176
Cdd:TIGR01145 162 RGQLKRLSRQL 172
 
Name Accession Description Interval E-value
PRK05758 PRK05758
F0F1 ATP synthase subunit delta; Validated
 1-178 7.15e-76

F0F1 ATP synthase subunit delta; Validated


Pssm-ID: 235593  Cd Length: 177  Bit Score: 224.67  E-value: 7.15e-76
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489409964   1 MAELTTLARPYAKAAFEHAQAHQQLANWSAMLGLAAAVSQDDTMQRMLKAPRLTSAQKATtFIEVCGEKFDAKAQNFIHV 80
Cdd:PRK05758   1 MSELSTVARPYAKALFEVALEKGSLDAWSEELTFLAEVAENEDLAALLSSPLVSAEQKKK-LLAAVFKSLSEYVQNFLKV 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489409964  81 VAENDRLPLLPEIAELFDLYKAEQEKSVDVDVTSAFALNQEQQDKLAKVLSARLGREVRLHAAEDASLIGGVVIRAGDLV 160
Cdd:PRK05758  80 LAENGRLALLPEILEQFEALRAEHENIVDAEVTSAFPLSEEQLDKLKAALEKRLGRKVKLNEKVDPSLIGGVIIKVGDRV 159

                        170
                 ....*....|....*...
gi 489409964 161 IDGSVRGKIAKLAEALKS 178
Cdd:PRK05758 160 IDGSVRGKLERLKDALKS 177
AtpH COG0712
FoF1-type ATP synthase, delta subunit [Energy production and conversion]; FoF1-type ATP ...
 1-178 2.76e-64

FoF1-type ATP synthase, delta subunit [Energy production and conversion]; FoF1-type ATP synthase, delta subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440476  Cd Length: 178  Bit Score: 195.38  E-value: 2.76e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489409964   1 MAeLTTLARPYAKAAFEHAQAHQQLANWSAMLG-LAAAVSQDDTMQRMLKAPRLTSAQKATTFIEVCGEKFDAKAQNFIH 79
Cdd:COG0712    1 MA-LSTIARRYAKALFELAKEKGALDEVEEELFaLAALLAENPELRALLSSPVISAEEKKELLEALFGGKLSPETLNFLK 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489409964  80 VVAENDRLPLLPEIAELFDLYKAEQEKSVDVDVTSAFALNQEQQDKLAKVLSARLGREVRLHAAEDASLIGGVVIRAGDL 159
Cdd:COG0712   80 LLVENGRLALLPEIAEEFEELAAERRGIVVAEVTSAVPLSEEQLERLAAALEKKTGKKVELNVKVDPSLIGGVVVRVGDK 159

                        170
                 ....*....|....*....
gi 489409964 160 VIDGSVRGKIAKLAEALKS 178
Cdd:COG0712  160 VIDGSVRGRLNRLRRALKG 178
OSCP pfam00213
ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP ...
 7-176 8.50e-60

ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP subunit which is this family. The ATP D subunit from metazoa are found in family pfam00401.


Pssm-ID: 459714  Cd Length: 172  Bit Score: 183.88  E-value: 8.50e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489409964    7 LARPYAKAAFEHAQAHQQLANWSAMLG-LAAAVSQDDTMQRMLKAPRLTSAQKATTFIEVCGEKFDAKAQNFIHVVAEND 85
Cdd:pfam00213   1 IARRYAKALFELAKEKGKLDQVEEELEaLEAALAENPDLAAFLSNPTISAEEKKALLLELFKGLLSPLTLNFLKLLAENG 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489409964   86 RLPLLPEIAELFDLYKAEQEKSVDVDVTSAFALNQEQQDKLAKVLSARLGR-EVRLHAAEDASLIGGVVIRAGDLVIDGS 164
Cdd:pfam00213  81 RLGLLPEIAEEFEELLDEARGIVEAEVTSAVPLSEEQLEKLAAALEKKTGKkKVKLENKVDPSLIGGVVVRVGDKVIDGS 160

                         170
                  ....*....|..
gi 489409964  165 VRGKIAKLAEAL 176
Cdd:pfam00213 161 VKGKLERLKRAL 172
ATP_synt_delta TIGR01145
ATP synthase, F1 delta subunit; This model describes the ATP synthase delta subunit in ...
 8-176 6.64e-44

ATP synthase, F1 delta subunit; This model describes the ATP synthase delta subunit in bacteria, mitochondria, and chloroplasts. It is sometimes called OSCP for Oligomycin Sensitivity Conferring Protein. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Delta subunit belongs to the F1 cluster or sector and functionally implicated in the overall stability of the complex. Expression of truncated forms of this subunit results in low ATPase activity. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 130215 [Multi-domain]  Cd Length: 172  Bit Score: 143.22  E-value: 6.64e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489409964    8 ARPYAKAAFEHAQAHQQLANWSAMLGLAAAVSQDD-TMQRMLKAPRLTSAQKATTFIEVCGEKFDAKAQNFIHVVAENDR 86
Cdd:TIGR01145   2 ARPYAKALFEIANEKSSLEEWGEMLNFVKEVLKNNkELKKFLSNPLISAEKKKEFIKNVFGEQLDESSLNLLLLLAENGR 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489409964   87 LPLLPEIAELFDLYKAEQEKSVDVDVTSAFALNQEQQDKLAKVLSARLGRE-VRLHAAEDASLIGGVVIRAGDLVIDGSV 165
Cdd:TIGR01145  82 LAALPDILDQFLKLSYEAQQTADVEVISAKPLTEDQQAKIAEKLEKITGAAkVKLNCKVDKDLIGGVIIRIGDRVIDGSV 161

                         170
                  ....*....|.
gi 489409964  166 RGKIAKLAEAL 176
Cdd:TIGR01145 162 RGQLKRLSRQL 172
PRK13429 PRK13429
F0F1 ATP synthase subunit delta; Provisional
 3-177 8.71e-36

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 237386  Cd Length: 181  Bit Score: 123.01  E-value: 8.71e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489409964   3 ELTTLARPYAKAAFEHAQAHQQLANWSAML-GLAAAVSQDDTMQRMLKAPRLTSAQKATTFIEVCG-EKFDAKAQNFIHV 80
Cdd:PRK13429   2 LLNAIARRYAKALFQLAKEKGQLDSVYEELkQLAELLEDSPELRDALSNPVLSAEEKKAVLEKLLGkLKVSPEVLNFLKL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489409964  81 VAENDRLPLLPEIAELF-DLYKaEQEKSVDVDVTSAFALNQEQQDKLAKVLSARLGREVRLHAAEDASLIGGVVIRAGDL 159
Cdd:PRK13429  82 LADRRRLGILPEIAARYlELAD-EQKGIVRATVTSAVPLSEAQQEAIRQKLEKMTGKKVELDTAVDPSLIGGVVVKIGDK 160

                        170
                 ....*....|....*...
gi 489409964 160 VIDGSVRGKIAKLAEALK 177
Cdd:PRK13429 161 VLDASVRTQLRRLKETLK 178
PRK13434 PRK13434
F0F1 ATP synthase subunit delta; Provisional
 4-176 2.43e-18

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 139571  Cd Length: 184  Bit Score: 78.05  E-value: 2.43e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489409964   4 LTTLARPYAKAAFEHAQAHQQLANwsAMLGLAAAVSQDDTMQRMLKAPRLTSAQKATTFIEVCGEKFDAKAQNFIHVVAE 83
Cdd:PRK13434   3 DSGVSKVYASALLGAANSPEEVEQ--ELGDLVQLLFKDEKIRNFFLSPTVSPEEKEQTLAKNLRGKISDITLNFLGVLLN 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489409964  84 NDRLPLLPEIAELFDLYKAEQEKSVDVDVTSAFALNQEQQDKLAKVLSARLGREVRLHAAEDASLIGGVVIRAGDLVIDG 163
Cdd:PRK13434  81 KGRFIYLPEIQKDFTVELDKKKGRVRAQIVSYPSLEPAQVDKLGSILSEKFKSEFILEVSEDKNLLGGFVVQFNDLKIEK 160

                        170
                 ....*....|...
gi 489409964 164 SVRGKIAKLAEAL 176
Cdd:PRK13434 161 SIASQLGEIKKAM 173
atpD CHL00119
ATP synthase CF1 delta subunit; Validated
 7-176 6.35e-18

ATP synthase CF1 delta subunit; Validated


Pssm-ID: 177042  Cd Length: 184  Bit Score: 76.95  E-value: 6.35e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489409964   7 LARPYAKAAFEHAQAHQQLANWSA-MLGLAAAVSQDDTMQRMLKAPRLTSAQKATTFIEVCGEKFDAKAQNFIHVVAEND 85
Cdd:CHL00119   8 IAQPYAEALLEFAKEKNIMEQITAdIQLILTFLNESPELKKFLANPLISKNAKKEVIKKTFGSQINENTLKFLMVLVDRG 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489409964  86 RLPLLPEIAELFdLYKAEQEKSVD-VDVTSAFALNQEQQDKLAKVLSARLG-REVRLHAAEDASLIGGVVIRAGDLVIDG 163
Cdd:CHL00119  88 RIALLDAIIEKY-LELVYKLASIKiAEVSTAVPLSSAQEEALIEKLKEMTNaKEIKLVITVDPSLIGGFLIKIGSKVIDT 166

                        170
                 ....*....|...
gi 489409964 164 SVRGKIAKLAEAL 176
Cdd:CHL00119 167 SIKGQLKQLASHL 179
PRK13430 PRK13430
F0F1 ATP synthase subunit delta; Provisional
 34-178 5.49e-17

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 237387 [Multi-domain]  Cd Length: 271  Bit Score: 76.14  E-value: 5.49e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489409964  34 LAAAVSQDDTMQRMLKAPRLTSAQKATTFIEVCGEKFDAKAQNFI-HVVAENDRLPLLPEIAELFDLYKAEQEKSVDVdV 112
Cdd:PRK13430 127 LGRILASNPELRLALSDRAAPAEAKRELLARLLYGKVTPVTERLAeQAVGRPRGRSIEEGLDELSNLAAARRGRSVAT-V 205

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 489409964 113 TSAFALNQEQQDKLAKVLSARLGREVRLHAAEDASLIGGVVIRAGDLVIDGSVRGKIAKLAEALKS 178
Cdd:PRK13430 206 TTAVPLSDEQKQRLAAALSRIYGRPVHLNSEVDPSVLGGMRVQVGDEVIDGSVAGRLERLRRRLAG 271
PRK13441 PRK13441
F0F1 ATP synthase subunit delta; Provisional
 4-177 1.38e-15

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 184054  Cd Length: 180  Bit Score: 70.55  E-value: 1.38e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489409964   4 LTTLARPYAKAAFEHAQAHQQLANWSAMLGLAAAVSQddTMQRMLKAPRLTSAQKATT---FIEVCGEKFDAKAQNFIHV 80
Cdd:PRK13441   3 YSAIASKYARALLNVAIELEKEEEYGEFLDLVCQIYE--SAKEFFDNPIVKPEKKVSLikeIMKEFGQEMDEFFENFLNL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489409964  81 VAENDRLPLLPEIAELFDLYKAEQEKSVDVDVTSAFALNQEQQDKLAKVLSARLGREVRLHAAEDASLIGGVVIRAGDLV 160
Cdd:PRK13441  81 VFENKRQKLLPQIRALFEYEKILSEQKVPVNLTTAHELSDEELKLLRKFVRKYVLRDPVFEETIDESLIAGAVVEFEGKR 160

                        170
                 ....*....|....*...
gi 489409964 161 IDGSVRGKIAKLA-EALK 177
Cdd:PRK13441 161 LDVTVQGRLKKIArEVLK 178
PRK08474 PRK08474
F0F1 ATP synthase subunit delta; Validated
 1-141 4.72e-13

F0F1 ATP synthase subunit delta; Validated


Pssm-ID: 236271  Cd Length: 176  Bit Score: 63.84  E-value: 4.72e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489409964   1 MAELttLARPYAKAAFEHAQAHQQLANWSAMLGLAAAVSqDDTMQRMLKAPRLTSAQKATTFIEVCGEKfDAKAQNFIHV 80
Cdd:PRK08474   1 MEEL--IAKRYAKALLSSLSSDELNDIYSNLKILSSAFA-DEKFKEIISSPEISKEQKIEFLLSFVDNA-NAKFQNFIKL 76

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 489409964  81 VAENDRLPLLPEIAELFDLYKAEQEKSVDVDVTSAFALNQEQQDKLAKVLSARLGREVRLH 141
Cdd:PRK08474  77 LAENKRLELIPAIAKELERQIALKENEYVGVVYSNEKLSEETLKKLEEKLSKKFNAKIKLK 137
PRK13428 PRK13428
F0F1 ATP synthase subunit delta; Provisional
 93-176 1.26e-06

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 184048 [Multi-domain]  Cd Length: 445  Bit Score: 47.42  E-value: 1.26e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489409964  93 IAELFDLYKAEQEKSVDVdVTSAFALNQEQQDKLAKVLSARLGREVRLHAAEDASLIGGVVIRAGDLVIDGSVRGKIAKL 172
Cdd:PRK13428 361 VLFLAELAVARRGEVVAQ-VSAAAELSDAQRTRLTEVLSRIYGRPVSVQLHIDPELLGGLSIAVGDEVIDGTLSSRLAAA 439


                 ....
gi 489409964 173 AEAL 176
Cdd:PRK13428 440 EAQL 443
PRK13436 PRK13436
F0F1 ATP synthase subunit delta; Provisional
 69-177 9.59e-05

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 184053  Cd Length: 179  Bit Score: 40.80  E-value: 9.59e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489409964  69 KFDAKAQNFIHVVAENDRLPLLPEIAELFDlykaeqEKSVDVD------VTSAFALNQEQQDKLAKVLSARLGREVRLHA 142
Cdd:PRK13436  70 KIDIYLVNFLKILAKNNLFIYIKQILKKFV------KLSNEKLnitygeIYTTEPLSEVQISRFESKLSKKLNKKVHLVN 143

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 489409964 143 AEDASLIGGVVIRAGDLVIDGSVRGKIAKLAEALK 177
Cdd:PRK13436 144 KIDPKLIAGIKIKVDNKVFENSIKSKLKELKKQVL 178
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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