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Conserved domains on  [gi|489342789|ref|WP_003249952|]
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MULTISPECIES: dihydropteroate synthase [Pseudomonas]

Protein Classification

dihydropteroate synthase( domain architecture ID 11416730)

dihydropteroate synthase catalyzes the formation of 7,8-dihydropteroate from para-aminobenzoic acid and 6-hydroxymethyl-7,8-dihydropterin-pyrophosphate, a key step in the folate biosynthetic pathway

CATH:  3.20.20.20
EC:  2.5.1.15
PubMed:  19899766|22383850
SCOP:  4003341

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
FolP COG0294
Dihydropteroate synthase [Coenzyme transport and metabolism]; Dihydropteroate synthase is part ...
15-283 1.01e-155

Dihydropteroate synthase [Coenzyme transport and metabolism]; Dihydropteroate synthase is part of the Pathway/BioSystem: Folate biosynthesis


:

Pssm-ID: 440063  Cd Length: 274  Bit Score: 434.87  E-value: 1.01e-155
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489342789  15 RVLDLSHTHVMGILNITPDSFSDGGRFSQRDEALRHAEAMVAAGATLIDIGGESTRPGARAVSVTEELERVAPMVEAINS 94
Cdd:COG0294    5 RTLDLSRPLVMGILNVTPDSFSDGGRYNDPDAALAHAEEMVEEGADIIDIGGESTRPGAEPVSAEEELARVVPVIEALRA 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489342789  95 RLDVVISVDTSTPAVMREAARLGAGLINDVRALERD-GALDAAADTGLPVCLMHMRGEPGNMQDDPHYQDVTADVTRYLE 173
Cdd:COG0294   85 EFDVPISVDTYKAEVARAALEAGADIINDVSGLRFDpEMAEVAAEYGVPVVLMHMRGTPQTMQRNPHYDDVVAEVRDFLE 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489342789 174 QRMAACAAAGIDADRIILDPGFGFAKTLAHNLSLFKHMEALYRLGRPLLVGVSRKSMIGLTLERPVGERLYGSLALAALA 253
Cdd:COG0294  165 ERIEAAEAAGIARERIILDPGIGFGKTLEHNLELLRRLDELRALGYPVLVGVSRKSFIGALLGRPPEERLAGTLAAAALA 244
                        250       260       270
                 ....*....|....*....|....*....|
gi 489342789 254 MTKGASILRVHDVAETVDVVRMIAAVQNAE 283
Cdd:COG0294  245 AARGADIVRVHDVAETVDALKVADAIRRAR 274
 
Name Accession Description Interval E-value
FolP COG0294
Dihydropteroate synthase [Coenzyme transport and metabolism]; Dihydropteroate synthase is part ...
15-283 1.01e-155

Dihydropteroate synthase [Coenzyme transport and metabolism]; Dihydropteroate synthase is part of the Pathway/BioSystem: Folate biosynthesis


Pssm-ID: 440063  Cd Length: 274  Bit Score: 434.87  E-value: 1.01e-155
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489342789  15 RVLDLSHTHVMGILNITPDSFSDGGRFSQRDEALRHAEAMVAAGATLIDIGGESTRPGARAVSVTEELERVAPMVEAINS 94
Cdd:COG0294    5 RTLDLSRPLVMGILNVTPDSFSDGGRYNDPDAALAHAEEMVEEGADIIDIGGESTRPGAEPVSAEEELARVVPVIEALRA 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489342789  95 RLDVVISVDTSTPAVMREAARLGAGLINDVRALERD-GALDAAADTGLPVCLMHMRGEPGNMQDDPHYQDVTADVTRYLE 173
Cdd:COG0294   85 EFDVPISVDTYKAEVARAALEAGADIINDVSGLRFDpEMAEVAAEYGVPVVLMHMRGTPQTMQRNPHYDDVVAEVRDFLE 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489342789 174 QRMAACAAAGIDADRIILDPGFGFAKTLAHNLSLFKHMEALYRLGRPLLVGVSRKSMIGLTLERPVGERLYGSLALAALA 253
Cdd:COG0294  165 ERIEAAEAAGIARERIILDPGIGFGKTLEHNLELLRRLDELRALGYPVLVGVSRKSFIGALLGRPPEERLAGTLAAAALA 244
                        250       260       270
                 ....*....|....*....|....*....|
gi 489342789 254 MTKGASILRVHDVAETVDVVRMIAAVQNAE 283
Cdd:COG0294  245 AARGADIVRVHDVAETVDALKVADAIRRAR 274
folP PRK11613
dihydropteroate synthase; Provisional
15-282 9.67e-135

dihydropteroate synthase; Provisional


Pssm-ID: 183230  Cd Length: 282  Bit Score: 382.18  E-value: 9.67e-135
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489342789  15 RVLDLSHTHVMGILNITPDSFSDGGRFSQRDEALRHAEAMVAAGATLIDIGGESTRPGARAVSVTEELERVAPMVEAINS 94
Cdd:PRK11613   8 TTLDLSHPHVMGILNVTPDSFSDGGTHNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELDRVIPVVEAIAQ 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489342789  95 RLDVVISVDTSTPAVMREAARLGAGLINDVRALERDGALDAAADTGLPVCLMHMRGEPGNMQDDPHYQDVTADVTRYLEQ 174
Cdd:PRK11613  88 RFEVWISVDTSKPEVIRESAKAGAHIINDIRSLSEPGALEAAAETGLPVCLMHMQGNPKTMQEAPKYDDVFAEVNRYFIE 167
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489342789 175 RMAACAAAGIDADRIILDPGFGFAKTLAHNLSLFKHMEALYRLGRPLLVGVSRKSMIGLTLERPVGERLYGSLALAALAM 254
Cdd:PRK11613 168 QIARCEAAGIAKEKLLLDPGFGFGKNLSHNYQLLARLAEFHHFNLPLLVGMSRKSMIGQLLNVGPSERLSGSLACAVIAA 247
                        250       260
                 ....*....|....*....|....*...
gi 489342789 255 TKGASILRVHDVAETVDVVRMIAAVQNA 282
Cdd:PRK11613 248 MQGAQIIRVHDVKETVEAMRVVEATLSA 275
DHPS cd00739
DHPS subgroup of Pterin binding enzymes. DHPS (dihydropteroate synthase), a functional ...
22-277 1.17e-120

DHPS subgroup of Pterin binding enzymes. DHPS (dihydropteroate synthase), a functional homodimer, catalyzes the condensation of p-aminobenzoic acid (pABA) in the de novo biosynthesis of folate, which is an essential cofactor in both nucleic acid and protein biosynthesis. Prokaryotes (and some lower eukaryotes) must synthesize folate de novo, while higher eukaryotes are able to utilize dietary folate and therefore lack DHPS. Sulfonamide drugs, which are substrate analogs of pABA, target DHPS.


Pssm-ID: 238380  Cd Length: 257  Bit Score: 345.36  E-value: 1.17e-120
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489342789  22 THVMGILNITPDSFSDGGRFSQRDEALRHAEAMVAAGATLIDIGGESTRPGARAVSVTEELERVAPMVEAINSRLDVVIS 101
Cdd:cd00739    1 TQIMGILNVTPDSFSDGGRFLSLDKAVAHAEKMIAEGADIIDIGGESTRPGADPVSVEEELERVIPVLEALRGELDVLIS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489342789 102 VDTSTPAVMREAARLGAGLINDVRALERDGA-LDAAADTGLPVCLMHMRGEPGNMQDDPHYQDVTADVTRYLEQRMAACA 180
Cdd:cd00739   81 VDTFRAEVARAALEAGADIINDVSGGSDDPAmLEVAAEYGAPLVLMHMRGTPKTMQENPYYEDVVDEVLSFLEARLEAAE 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489342789 181 AAGIDADRIILDPGFGFAKTLAHNLSLFKHMEALYRLGRPLLVGVSRKSMIGLTLERPVGERLYGSLALAALAMTKGASI 260
Cdd:cd00739  161 SAGVARNRIILDPGIGFGKTPEHNLELLRRLDELKQLGLPVLVGASRKSFIGALLGREPKDRDWGTLALSALAAANGADI 240
                        250
                 ....*....|....*..
gi 489342789 261 LRVHDVAETVDVVRMIA 277
Cdd:cd00739  241 VRVHDVKATRDALKVAD 257
DHPS TIGR01496
dihydropteroate synthase; This model represents dihydropteroate synthase, the enzyme that ...
24-279 2.69e-119

dihydropteroate synthase; This model represents dihydropteroate synthase, the enzyme that catalyzes the second to last step in folic acid biosynthesis. The gene is usually designated folP (folic acid biosynthsis) or sul (sulfanilamide resistance). This model represents one branch of the family of pterin-binding enzymes (pfam00809) and of a cluster of dihydropteroate synthase and related enzymes (COG0294). Other members of pfam00809 and COG0294 are represented by model TIGR00284. [Biosynthesis of cofactors, prosthetic groups, and carriers, Folic acid]


Pssm-ID: 273657  Cd Length: 257  Bit Score: 341.93  E-value: 2.69e-119
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489342789   24 VMGILNITPDSFSDGGRFSQRDEALRHAEAMVAAGATLIDIGGESTRPGARAVSVTEELERVAPMVEAINSRLDVVISVD 103
Cdd:TIGR01496   2 IMGIVNVTPDSFSDGGRFLSVDKAVAHAERMLEEGADIIDVGGESTRPGADRVSPEEELNRVVPVIKALRDQPDVPISVD 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489342789  104 TSTPAVMREAARLGAGLINDVRALERDGALDAAADTGLPVCLMHMRGEPGNMQDDPHYQDVTADVTRYLEQRMAACAAAG 183
Cdd:TIGR01496  82 TYRAEVARAALEAGADIINDVSGGQDPAMLEVAAEYGVPLVLMHMRGTPRTMQENPHYEDVVEEVLRFLEARAEELVAAG 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489342789  184 IDADRIILDPGFGFAKTLAHNLSLFKHMEALYRLGRPLLVGVSRKSMIGLTLERPVGERLYGSLALAALAMTKGASILRV 263
Cdd:TIGR01496 162 VAAERIILDPGIGFGKTPEHNLELLKHLEEFVALGYPLLVGASRKSFIGALLGTPPEERLEGTLAASAYAVQKGADIVRV 241
                         250
                  ....*....|....*.
gi 489342789  264 HDVAETVDVVRMIAAV 279
Cdd:TIGR01496 242 HDVKETRDALKVLEAL 257
Pterin_bind pfam00809
Pterin binding enzyme; This family includes a variety of pterin binding enzymes that all adopt ...
25-264 6.64e-91

Pterin binding enzyme; This family includes a variety of pterin binding enzymes that all adopt a TIM barrel fold. The family includes dihydropteroate synthase EC:2.5.1.15 as well as a group methyltransferase enzymes including methyltetrahydrofolate, corrinoid iron-sulfur protein methyltransferase (MeTr) that catalyzes a key step in the Wood-Ljungdahl pathway of carbon dioxide fixation. It transfers the N5-methyl group from methyltetrahydrofolate (CH3-H4folate) to a cob(I)amide centre in another protein, the corrinoid iron-sulfur protein. MeTr is a member of a family of proteins that includes methionine synthase and methanogenic enzymes that activate the methyl group of methyltetra-hydromethano(or -sarcino)pterin.


Pssm-ID: 395651 [Multi-domain]  Cd Length: 243  Bit Score: 269.54  E-value: 6.64e-91
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489342789   25 MGILNITPDSFSDGGRFSQRDEALRHAEAMVAAGATLIDIGGESTRPGARAVSVTEELERVAPMVEAINSRLDVVISVDT 104
Cdd:pfam00809   1 MGILNVTPDSFSDGGRFLDLDKALAHARRMVEEGADIIDIGGESTRPGAERVDGEEEMERVLPVLAALRDEADVPISVDT 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489342789  105 STPAVMREAARLGAGLINDVRALERDGA-LDAAADTGLPVCLMHMRGEPGNMQDDPH-YQDVTADVTRYLEQRMAACAAA 182
Cdd:pfam00809  81 TKAEVAEAALKAGADIINDISGGDGDPEmAELAAEYGAAVVVMHMDGTPKTMQENEQqYEDVVEEVERFLRARVAAAEEA 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489342789  183 GIDADRIILDPGFGFAKTLAHNLSLFKHMEALYR-LGRPLLVGVSRKSMIGLTLERPVGERLYGSLALAALAMTKGASIL 261
Cdd:pfam00809 161 GVPPEDIILDPGIGFGKTEEHNLELLRTLDELRViLGVPVLLGVSRKSFIGRGLPLGGEERDAGTAAFLALAIAAGADIV 240

                  ...
gi 489342789  262 RVH 264
Cdd:pfam00809 241 RVH 243
 
Name Accession Description Interval E-value
FolP COG0294
Dihydropteroate synthase [Coenzyme transport and metabolism]; Dihydropteroate synthase is part ...
15-283 1.01e-155

Dihydropteroate synthase [Coenzyme transport and metabolism]; Dihydropteroate synthase is part of the Pathway/BioSystem: Folate biosynthesis


Pssm-ID: 440063  Cd Length: 274  Bit Score: 434.87  E-value: 1.01e-155
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489342789  15 RVLDLSHTHVMGILNITPDSFSDGGRFSQRDEALRHAEAMVAAGATLIDIGGESTRPGARAVSVTEELERVAPMVEAINS 94
Cdd:COG0294    5 RTLDLSRPLVMGILNVTPDSFSDGGRYNDPDAALAHAEEMVEEGADIIDIGGESTRPGAEPVSAEEELARVVPVIEALRA 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489342789  95 RLDVVISVDTSTPAVMREAARLGAGLINDVRALERD-GALDAAADTGLPVCLMHMRGEPGNMQDDPHYQDVTADVTRYLE 173
Cdd:COG0294   85 EFDVPISVDTYKAEVARAALEAGADIINDVSGLRFDpEMAEVAAEYGVPVVLMHMRGTPQTMQRNPHYDDVVAEVRDFLE 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489342789 174 QRMAACAAAGIDADRIILDPGFGFAKTLAHNLSLFKHMEALYRLGRPLLVGVSRKSMIGLTLERPVGERLYGSLALAALA 253
Cdd:COG0294  165 ERIEAAEAAGIARERIILDPGIGFGKTLEHNLELLRRLDELRALGYPVLVGVSRKSFIGALLGRPPEERLAGTLAAAALA 244
                        250       260       270
                 ....*....|....*....|....*....|
gi 489342789 254 MTKGASILRVHDVAETVDVVRMIAAVQNAE 283
Cdd:COG0294  245 AARGADIVRVHDVAETVDALKVADAIRRAR 274
folP PRK11613
dihydropteroate synthase; Provisional
15-282 9.67e-135

dihydropteroate synthase; Provisional


Pssm-ID: 183230  Cd Length: 282  Bit Score: 382.18  E-value: 9.67e-135
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489342789  15 RVLDLSHTHVMGILNITPDSFSDGGRFSQRDEALRHAEAMVAAGATLIDIGGESTRPGARAVSVTEELERVAPMVEAINS 94
Cdd:PRK11613   8 TTLDLSHPHVMGILNVTPDSFSDGGTHNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELDRVIPVVEAIAQ 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489342789  95 RLDVVISVDTSTPAVMREAARLGAGLINDVRALERDGALDAAADTGLPVCLMHMRGEPGNMQDDPHYQDVTADVTRYLEQ 174
Cdd:PRK11613  88 RFEVWISVDTSKPEVIRESAKAGAHIINDIRSLSEPGALEAAAETGLPVCLMHMQGNPKTMQEAPKYDDVFAEVNRYFIE 167
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489342789 175 RMAACAAAGIDADRIILDPGFGFAKTLAHNLSLFKHMEALYRLGRPLLVGVSRKSMIGLTLERPVGERLYGSLALAALAM 254
Cdd:PRK11613 168 QIARCEAAGIAKEKLLLDPGFGFGKNLSHNYQLLARLAEFHHFNLPLLVGMSRKSMIGQLLNVGPSERLSGSLACAVIAA 247
                        250       260
                 ....*....|....*....|....*...
gi 489342789 255 TKGASILRVHDVAETVDVVRMIAAVQNA 282
Cdd:PRK11613 248 MQGAQIIRVHDVKETVEAMRVVEATLSA 275
DHPS cd00739
DHPS subgroup of Pterin binding enzymes. DHPS (dihydropteroate synthase), a functional ...
22-277 1.17e-120

DHPS subgroup of Pterin binding enzymes. DHPS (dihydropteroate synthase), a functional homodimer, catalyzes the condensation of p-aminobenzoic acid (pABA) in the de novo biosynthesis of folate, which is an essential cofactor in both nucleic acid and protein biosynthesis. Prokaryotes (and some lower eukaryotes) must synthesize folate de novo, while higher eukaryotes are able to utilize dietary folate and therefore lack DHPS. Sulfonamide drugs, which are substrate analogs of pABA, target DHPS.


Pssm-ID: 238380  Cd Length: 257  Bit Score: 345.36  E-value: 1.17e-120
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489342789  22 THVMGILNITPDSFSDGGRFSQRDEALRHAEAMVAAGATLIDIGGESTRPGARAVSVTEELERVAPMVEAINSRLDVVIS 101
Cdd:cd00739    1 TQIMGILNVTPDSFSDGGRFLSLDKAVAHAEKMIAEGADIIDIGGESTRPGADPVSVEEELERVIPVLEALRGELDVLIS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489342789 102 VDTSTPAVMREAARLGAGLINDVRALERDGA-LDAAADTGLPVCLMHMRGEPGNMQDDPHYQDVTADVTRYLEQRMAACA 180
Cdd:cd00739   81 VDTFRAEVARAALEAGADIINDVSGGSDDPAmLEVAAEYGAPLVLMHMRGTPKTMQENPYYEDVVDEVLSFLEARLEAAE 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489342789 181 AAGIDADRIILDPGFGFAKTLAHNLSLFKHMEALYRLGRPLLVGVSRKSMIGLTLERPVGERLYGSLALAALAMTKGASI 260
Cdd:cd00739  161 SAGVARNRIILDPGIGFGKTPEHNLELLRRLDELKQLGLPVLVGASRKSFIGALLGREPKDRDWGTLALSALAAANGADI 240
                        250
                 ....*....|....*..
gi 489342789 261 LRVHDVAETVDVVRMIA 277
Cdd:cd00739  241 VRVHDVKATRDALKVAD 257
DHPS TIGR01496
dihydropteroate synthase; This model represents dihydropteroate synthase, the enzyme that ...
24-279 2.69e-119

dihydropteroate synthase; This model represents dihydropteroate synthase, the enzyme that catalyzes the second to last step in folic acid biosynthesis. The gene is usually designated folP (folic acid biosynthsis) or sul (sulfanilamide resistance). This model represents one branch of the family of pterin-binding enzymes (pfam00809) and of a cluster of dihydropteroate synthase and related enzymes (COG0294). Other members of pfam00809 and COG0294 are represented by model TIGR00284. [Biosynthesis of cofactors, prosthetic groups, and carriers, Folic acid]


Pssm-ID: 273657  Cd Length: 257  Bit Score: 341.93  E-value: 2.69e-119
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489342789   24 VMGILNITPDSFSDGGRFSQRDEALRHAEAMVAAGATLIDIGGESTRPGARAVSVTEELERVAPMVEAINSRLDVVISVD 103
Cdd:TIGR01496   2 IMGIVNVTPDSFSDGGRFLSVDKAVAHAERMLEEGADIIDVGGESTRPGADRVSPEEELNRVVPVIKALRDQPDVPISVD 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489342789  104 TSTPAVMREAARLGAGLINDVRALERDGALDAAADTGLPVCLMHMRGEPGNMQDDPHYQDVTADVTRYLEQRMAACAAAG 183
Cdd:TIGR01496  82 TYRAEVARAALEAGADIINDVSGGQDPAMLEVAAEYGVPLVLMHMRGTPRTMQENPHYEDVVEEVLRFLEARAEELVAAG 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489342789  184 IDADRIILDPGFGFAKTLAHNLSLFKHMEALYRLGRPLLVGVSRKSMIGLTLERPVGERLYGSLALAALAMTKGASILRV 263
Cdd:TIGR01496 162 VAAERIILDPGIGFGKTPEHNLELLKHLEEFVALGYPLLVGASRKSFIGALLGTPPEERLEGTLAASAYAVQKGADIVRV 241
                         250
                  ....*....|....*.
gi 489342789  264 HDVAETVDVVRMIAAV 279
Cdd:TIGR01496 242 HDVKETRDALKVLEAL 257
Pterin_binding cd00423
Pterin binding enzymes. This family includes dihydropteroate synthase (DHPS) and ...
22-277 1.73e-100

Pterin binding enzymes. This family includes dihydropteroate synthase (DHPS) and cobalamin-dependent methyltransferases such as methyltetrahydrofolate, corrinoid iron-sulfur protein methyltransferase (MeTr) and methionine synthase (MetH). DHPS, a functional homodimer, catalyzes the condensation of p-aminobenzoic acid (pABA) in the de novo biosynthesis of folate, which is an essential cofactor in both nucleic acid and protein biosynthesis. Prokaryotes (and some lower eukaryotes) must synthesize folate de novo, while higher eukaryotes are able to utilize dietary folate and therefore lack DHPS. Sulfonamide drugs, which are substrate analogs of pABA, target DHPS. Cobalamin-dependent methyltransferases catalyze the transfer of a methyl group via a methyl- cob(III)amide intermediate. These include MeTr, a functional heterodimer, and the folate binding domain of MetH.


Pssm-ID: 238242 [Multi-domain]  Cd Length: 258  Bit Score: 294.57  E-value: 1.73e-100
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489342789  22 THVMGILNITPDSFSDGGRFSQRDEALRHAEAMVAAGATLIDIGGESTRPGARAVSVTEELERVAPMVEAINSRLDVVIS 101
Cdd:cd00423    1 TLIMGILNVTPDSFSDGGKFLSLDKALEHARRMVEEGADIIDIGGESTRPGAEPVSVEEELERVIPVLRALAGEPDVPIS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489342789 102 VDTSTPAVMREAARLGAGLINDVRALERDGA-LDAAADTGLPVCLMHMRGEPGNMQDDPHYQDVTADVTRYLEQRMAACA 180
Cdd:cd00423   81 VDTFNAEVAEAALKAGADIINDVSGGRGDPEmAPLAAEYGAPVVLMHMDGTPQTMQNNPYYADVVDEVVEFLEERVEAAT 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489342789 181 AAGIDADRIILDPGFGFAKTLAHNLSLFKHMEALYRL-GRPLLVGVSRKSMIGLTLERPVGERLYGSLALAALAMTKGAS 259
Cdd:cd00423  161 EAGIPPEDIILDPGIGFGKTEEHNLELLRRLDAFRELpGLPLLLGVSRKSFLGDLLSVGPKDRLAGTAAFLAAAILNGAD 240
                        250
                 ....*....|....*...
gi 489342789 260 ILRVHDVAETVDVVRMIA 277
Cdd:cd00423  241 IVRVHDVKELRDAIKVAE 258
Pterin_bind pfam00809
Pterin binding enzyme; This family includes a variety of pterin binding enzymes that all adopt ...
25-264 6.64e-91

Pterin binding enzyme; This family includes a variety of pterin binding enzymes that all adopt a TIM barrel fold. The family includes dihydropteroate synthase EC:2.5.1.15 as well as a group methyltransferase enzymes including methyltetrahydrofolate, corrinoid iron-sulfur protein methyltransferase (MeTr) that catalyzes a key step in the Wood-Ljungdahl pathway of carbon dioxide fixation. It transfers the N5-methyl group from methyltetrahydrofolate (CH3-H4folate) to a cob(I)amide centre in another protein, the corrinoid iron-sulfur protein. MeTr is a member of a family of proteins that includes methionine synthase and methanogenic enzymes that activate the methyl group of methyltetra-hydromethano(or -sarcino)pterin.


Pssm-ID: 395651 [Multi-domain]  Cd Length: 243  Bit Score: 269.54  E-value: 6.64e-91
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489342789   25 MGILNITPDSFSDGGRFSQRDEALRHAEAMVAAGATLIDIGGESTRPGARAVSVTEELERVAPMVEAINSRLDVVISVDT 104
Cdd:pfam00809   1 MGILNVTPDSFSDGGRFLDLDKALAHARRMVEEGADIIDIGGESTRPGAERVDGEEEMERVLPVLAALRDEADVPISVDT 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489342789  105 STPAVMREAARLGAGLINDVRALERDGA-LDAAADTGLPVCLMHMRGEPGNMQDDPH-YQDVTADVTRYLEQRMAACAAA 182
Cdd:pfam00809  81 TKAEVAEAALKAGADIINDISGGDGDPEmAELAAEYGAAVVVMHMDGTPKTMQENEQqYEDVVEEVERFLRARVAAAEEA 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489342789  183 GIDADRIILDPGFGFAKTLAHNLSLFKHMEALYR-LGRPLLVGVSRKSMIGLTLERPVGERLYGSLALAALAMTKGASIL 261
Cdd:pfam00809 161 GVPPEDIILDPGIGFGKTEEHNLELLRTLDELRViLGVPVLLGVSRKSFIGRGLPLGGEERDAGTAAFLALAIAAGADIV 240

                  ...
gi 489342789  262 RVH 264
Cdd:pfam00809 241 RVH 243
PRK13753 PRK13753
dihydropteroate synthase; Provisional
24-264 1.53e-33

dihydropteroate synthase; Provisional


Pssm-ID: 184303  Cd Length: 279  Bit Score: 123.66  E-value: 1.53e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489342789  24 VMGILNITPDSFSDGGRFSQRDEALRHAEAMVAAGATLIDIGGESTRPGARAVSVTEELERVAPMVEAINSRLDVViSVD 103
Cdd:PRK13753   4 VFGILNLTEDSFFDESRRLDPAGAVTAAIEMLRVGSDVVDVGPAASHPDARPVSPADEIRRIAPLLDALSDQMHRV-SID 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489342789 104 TSTPAVMREAARLGAGLINDVRALERDGALDAAADTGLPVCLMHMRGEPGNMQDDPHY--QDVTADVTRYLEQRMAACAA 181
Cdd:PRK13753  83 SFQPETQRYALKRGVGYLNDIQGFPDPALYPDIAEADCRLVVMHSAQRDGIATRTGHLrpEDALDEIVRFFEARVSALRR 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489342789 182 AGIDADRIILDPGFGF-----AKTLAHNLSLFKHMEAlyRLGRPLLVGVSRKSMIGLTLERPVGERLYGSLALAALAMTK 256
Cdd:PRK13753 163 SGVAADRLILDPGMGFflspaPETSLHVLSNLQKLKS--ALGLPLLVSVSRKSFLGATVGLPVKDLGPASLAAELHAIGN 240

                 ....*...
gi 489342789 257 GASILRVH 264
Cdd:PRK13753 241 GADYVRTH 248
PRK07535 PRK07535
methyltetrahydrofolate:corrinoid/iron-sulfur protein methyltransferase; Validated
44-193 4.18e-03

methyltetrahydrofolate:corrinoid/iron-sulfur protein methyltransferase; Validated


Pssm-ID: 181022 [Multi-domain]  Cd Length: 261  Bit Score: 37.91  E-value: 4.18e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489342789  44 RDEALRHAEAM--VAAGATLIDIGGestrpgarAVSVTEELERVAPMVEAINSRLDVVISVDTSTPAVMREAARL--GAG 119
Cdd:PRK07535  22 KDAAFIQKLALkqAEAGADYLDVNA--------GTAVEEEPETMEWLVETVQEVVDVPLCIDSPNPAAIEAGLKVakGPP 93
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 489342789 120 LINDVRALER--DGALDAAADTGLPVCLMHMrgepgnmqDD---PHYQDVTADVTRYLEQRmaaCAAAGIDADRIILDP 193
Cdd:PRK07535  94 LINSVSAEGEklEVVLPLVKKYNAPVVALTM--------DDtgiPKDAEDRLAVAKELVEK---ADEYGIPPEDIYIDP 161
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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