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Conserved domains on  [gi|489194453|ref|WP_003103778|]
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T6SS effector muramidase immunity protein Tsi3 [Pseudomonas aeruginosa]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Tsi3_fam NF038331
Tsi3 family protein; Members of this family are related Tsi3, the immunity protein for the ...
 34-145 4.66e-36

Tsi3 family protein; Members of this family are related Tsi3, the immunity protein for the type VI secretion system effector muramidase Tse3.


:

Pssm-ID: 439626  Cd Length: 116  Bit Score: 120.14  E-value: 4.66e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489194453  34 LVVERPVGFDARRSAEGFRFDEGG--KLRNPRQLEVQRQD--APPPLDLASRRLGDGEARYKVEEDDGGSAGSEYRLWAA 109
Cdd:NF038331   1 LVLELPEGFEAEQTADGFRVRPPGseARRSPLEITVTLHPgpEPPPGDPSRRSLGGRRARYRVDREEGGSGGDEYTLTAW 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 489194453 110 KPAGARWIVVSASEQSEDGEPTFALAWALLERARLQ 145
Cdd:NF038331  81 EPLGGGYVRYRQTTQSEGGEPDFELAWAVLESARCQ 116
 
Name Accession Description Interval E-value
Tsi3_fam NF038331
Tsi3 family protein; Members of this family are related Tsi3, the immunity protein for the ...
 34-145 4.66e-36

Tsi3 family protein; Members of this family are related Tsi3, the immunity protein for the type VI secretion system effector muramidase Tse3.


Pssm-ID: 439626  Cd Length: 116  Bit Score: 120.14  E-value: 4.66e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489194453  34 LVVERPVGFDARRSAEGFRFDEGG--KLRNPRQLEVQRQD--APPPLDLASRRLGDGEARYKVEEDDGGSAGSEYRLWAA 109
Cdd:NF038331   1 LVLELPEGFEAEQTADGFRVRPPGseARRSPLEITVTLHPgpEPPPGDPSRRSLGGRRARYRVDREEGGSGGDEYTLTAW 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 489194453 110 KPAGARWIVVSASEQSEDGEPTFALAWALLERARLQ 145
Cdd:NF038331  81 EPLGGGYVRYRQTTQSEGGEPDFELAWAVLESARCQ 116
 
Name Accession Description Interval E-value
Tsi3_fam NF038331
Tsi3 family protein; Members of this family are related Tsi3, the immunity protein for the ...
 34-145 4.66e-36

Tsi3 family protein; Members of this family are related Tsi3, the immunity protein for the type VI secretion system effector muramidase Tse3.


Pssm-ID: 439626  Cd Length: 116  Bit Score: 120.14  E-value: 4.66e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489194453  34 LVVERPVGFDARRSAEGFRFDEGG--KLRNPRQLEVQRQD--APPPLDLASRRLGDGEARYKVEEDDGGSAGSEYRLWAA 109
Cdd:NF038331   1 LVLELPEGFEAEQTADGFRVRPPGseARRSPLEITVTLHPgpEPPPGDPSRRSLGGRRARYRVDREEGGSGGDEYTLTAW 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 489194453 110 KPAGARWIVVSASEQSEDGEPTFALAWALLERARLQ 145
Cdd:NF038331  81 EPLGGGYVRYRQTTQSEGGEPDFELAWAVLESARCQ 116
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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