NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|489186379|ref|WP_003095795|]
View 

MULTISPECIES: potassium/proton antiporter [Pseudomonas]

Protein Classification

potassium/proton antiporter( domain architecture ID 11480727)

potassium/proton antiporter extrudes potassium in exchange for external protons and maintains the internal concentration of potassium under toxic levels

CATH:  3.30.70.1450
PubMed:  9537504
TCDB:  2.A.36

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
PRK05326 PRK05326
potassium/proton antiporter;
3-569 0e+00

potassium/proton antiporter;


:

Pssm-ID: 235410 [Multi-domain]  Cd Length: 562  Bit Score: 750.49  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379   3 AVTVNNFFLIGAVLVGMSILVSSLSSRLGIPILVIFLAVGMIAGNDGVGGIVFDNYPVAYLVGNLALAVILLDGGLRTRV 82
Cdd:PRK05326   1 MDTINSLLLIGALLLLLSILASRLSSRLGIPSLLLFLAIGMLAGEDGLGGIQFDNYPLAYLVGNLALAVILFDGGLRTRW 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379  83 SSFRVALWPALSLATLGVLVTTGLTGIAAAWLFDLHWMEGLLIGAIVGSTDAAAVFSLLGGKG--LNERVTATLEIESGS 160
Cdd:PRK05326  81 SSFRPALGPALSLATLGVLITAGLTGLFAHWLLGLDWLEGLLLGAIVGSTDAAAVFSLLRGKGlnLKERVASTLEIESGS 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379 161 NDPMAVFLTVTLIEMLASGQTGLSWGFVLHLVQQFGLGALLGLGGGWLLLQLINRMHL-AGGLYPLLVISGGLLVFALAN 239
Cdd:PRK05326 161 NDPMAVFLTITLIELITGGETGLSWGFLLLFLQQFGLGALIGLLGGWLLVQLLNRIALpAEGLYPILVLAGALLIFALTA 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379 240 AVGGSGILAIYLCGLLLGNRPIRSRHGILHMLDGMAWLAQIGMFLVLGLLVTPHDLWPIALPALALALWMILVARPLSVL 319
Cdd:PRK05326 241 ALGGSGFLAVYLAGLVLGNRPIRHRHSILRFFDGLAWLAQIGMFLVLGLLVTPSRLLDIALPALLLALFLILVARPLAVF 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379 320 IGLIPFRaFHDREKAFIAWVGLRGAVPIILAVFPLMAGLPNAQLFFNVAFFIVLVSLLVQGTSLPWAARLLRVVVPPDPA 399
Cdd:PRK05326 321 LSLLPFR-FNLREKLFISWVGLRGAVPIVLATFPMMAGLPNAQLIFNVVFFVVLVSLLLQGTTLPWAARKLGVVVPPEAR 399
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379 400 PISRAGLEIHPTSEWELFVYHLNKEKWCIGAALRELKMPGGTRIAALFRGTELLHPSGSTILEADDILCVIGHEHDLPAL 479
Cdd:PRK05326 400 PVSRVELDPLEESDAELLEYRVPAGSWLVGKALRDLRLPRGALIALIIRDGKLLVPTGSTRLKAGDVLLVLGPERDLPAL 479
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379 480 GKLFSQAPDRGLGARFFGDFVLEGDAQLSAVASLYGLKLDgidgEQALGRFIAHEIGGEAVIGDQVEWNGLTWTVAAleg 559
Cdd:PRK05326 480 ERLFSQSPPGKLDQRFFGDFILEGDAKLADLALIYGLELD----QQTLGELIKQRLGGAPVVGDQVELGGIILTVAE--- 552
                        570
                 ....*....|
gi 489186379 560 NRIRKVGVKF 569
Cdd:PRK05326 553 GRVTKVGLRL 562
 
Name Accession Description Interval E-value
PRK05326 PRK05326
potassium/proton antiporter;
3-569 0e+00

potassium/proton antiporter;


Pssm-ID: 235410 [Multi-domain]  Cd Length: 562  Bit Score: 750.49  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379   3 AVTVNNFFLIGAVLVGMSILVSSLSSRLGIPILVIFLAVGMIAGNDGVGGIVFDNYPVAYLVGNLALAVILLDGGLRTRV 82
Cdd:PRK05326   1 MDTINSLLLIGALLLLLSILASRLSSRLGIPSLLLFLAIGMLAGEDGLGGIQFDNYPLAYLVGNLALAVILFDGGLRTRW 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379  83 SSFRVALWPALSLATLGVLVTTGLTGIAAAWLFDLHWMEGLLIGAIVGSTDAAAVFSLLGGKG--LNERVTATLEIESGS 160
Cdd:PRK05326  81 SSFRPALGPALSLATLGVLITAGLTGLFAHWLLGLDWLEGLLLGAIVGSTDAAAVFSLLRGKGlnLKERVASTLEIESGS 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379 161 NDPMAVFLTVTLIEMLASGQTGLSWGFVLHLVQQFGLGALLGLGGGWLLLQLINRMHL-AGGLYPLLVISGGLLVFALAN 239
Cdd:PRK05326 161 NDPMAVFLTITLIELITGGETGLSWGFLLLFLQQFGLGALIGLLGGWLLVQLLNRIALpAEGLYPILVLAGALLIFALTA 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379 240 AVGGSGILAIYLCGLLLGNRPIRSRHGILHMLDGMAWLAQIGMFLVLGLLVTPHDLWPIALPALALALWMILVARPLSVL 319
Cdd:PRK05326 241 ALGGSGFLAVYLAGLVLGNRPIRHRHSILRFFDGLAWLAQIGMFLVLGLLVTPSRLLDIALPALLLALFLILVARPLAVF 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379 320 IGLIPFRaFHDREKAFIAWVGLRGAVPIILAVFPLMAGLPNAQLFFNVAFFIVLVSLLVQGTSLPWAARLLRVVVPPDPA 399
Cdd:PRK05326 321 LSLLPFR-FNLREKLFISWVGLRGAVPIVLATFPMMAGLPNAQLIFNVVFFVVLVSLLLQGTTLPWAARKLGVVVPPEAR 399
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379 400 PISRAGLEIHPTSEWELFVYHLNKEKWCIGAALRELKMPGGTRIAALFRGTELLHPSGSTILEADDILCVIGHEHDLPAL 479
Cdd:PRK05326 400 PVSRVELDPLEESDAELLEYRVPAGSWLVGKALRDLRLPRGALIALIIRDGKLLVPTGSTRLKAGDVLLVLGPERDLPAL 479
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379 480 GKLFSQAPDRGLGARFFGDFVLEGDAQLSAVASLYGLKLDgidgEQALGRFIAHEIGGEAVIGDQVEWNGLTWTVAAleg 559
Cdd:PRK05326 480 ERLFSQSPPGKLDQRFFGDFILEGDAKLADLALIYGLELD----QQTLGELIKQRLGGAPVVGDQVELGGIILTVAE--- 552
                        570
                 ....*....|
gi 489186379 560 NRIRKVGVKF 569
Cdd:PRK05326 553 GRVTKVGLRL 562
NhaP2 COG3263
NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains [Energy ...
5-503 0e+00

NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains [Energy production and conversion, Inorganic ion transport and metabolism];


Pssm-ID: 442494 [Multi-domain]  Cd Length: 502  Bit Score: 650.25  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379   5 TVNNFFLIGAVLVGMSILVSSLSSRLGIPILVIFLAVGMIAGNDGVGGIVFDNYPVAYLVGNLALAVILLDGGLRTRVSS 84
Cdd:COG3263    3 TLNLILLIGALLLLLSILASKLSSRLGVPLLLLFLGIGMLAGEDGLGGIQFDDAELAQLIGSLALAVILFDGGLRTRWSS 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379  85 FRVALWPALSLATLGVLVTTGLTGIAAAWLFDLHWMEGLLIGAIVGSTDAAAVFSLLGGKG--LNERVTATLEIESGSND 162
Cdd:COG3263   83 FRPVLAPALSLATLGVLLTAGLTGVFAHWLLGLSWLEGLLLGAIVSSTDAAAVFSILRSKGlnLKERLASTLELESGSND 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379 163 PMAVFLTVTLIEMLASGQTGLsWGFVLHLVQQFGLGALLGLGGGWLLLQLINRMHL-AGGLYPLLVISGGLLVFALANAV 241
Cdd:COG3263  163 PMAVFLTIALIELITGGGASG-WSLLLLFVLQMGLGALVGLAGGWLGVWLLNRIRLpAEGLYPVLVLALALLAFGATALL 241
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379 242 GGSGILAIYLCGLLLGNRPIRSRHGILHMLDGMAWLAQIGMFLVLGLLVTPHDLWPIALPALALALWMILVARPLSVLIG 321
Cdd:COG3263  242 GGSGFLAVYLAGLVLGNRRLPHKKSILRFHDGLAWLAQIGMFLMLGLLVFPSRLLPVALPALLIALFLIFVARPLAVFLS 321
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379 322 LIPFRaFHDREKAFIAWVGLRGAVPIILAVFPLMAGLPNAQLFFNVAFFIVLVSLLVQGTSLPWAARLLRVVVPPDPAPI 401
Cdd:COG3263  322 LLPFR-FSWREKLFISWVGLRGAVPIVLATFPLLAGLPGAQLIFNVVFFVVLVSLLVQGTTLPPVARKLGLEVPPEPKPL 400
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379 402 SRAGLEIHPTSEWELFVYHLNKEKWCIGAALRELKMPGGTRIAALFRGTELLHPSGSTILEADDILCVIGHEHDLPALGK 481
Cdd:COG3263  401 TRVELELLEELDAELVEYRVPPGSPAVGKTLRELRLPEGALVVLIVRDGELLVPRGSTRLQAGDQLLVLAPPEDLEALER 480
                        490       500
                 ....*....|....*....|..
gi 489186379 482 LFSQAPDRGLGARFFGDFVLEG 503
Cdd:COG3263  481 LFAAVSRAGTLAEWFGDRVRLG 502
Na_H_Exchanger pfam00999
Sodium/hydrogen exchanger family; Na/H antiporters are key transporters in maintaining the pH ...
15-385 1.81e-38

Sodium/hydrogen exchanger family; Na/H antiporters are key transporters in maintaining the pH of actively metabolising cells. The molecular mechanisms of antiport are unclear. These antiporters contain 10-12 transmembrane regions (M) at the amino-terminus and a large cytoplasmic region at the carboxyl terminus. The transmembrane regions M3-M12 share identity with other members of the family. The M6 and M7 regions are highly conserved. Thus, this is thought to be the region that is involved in the transport of sodium and hydrogen ions. The cytoplasmic region has little similarity throughout the family.


Pssm-ID: 425982 [Multi-domain]  Cd Length: 377  Bit Score: 145.48  E-value: 1.81e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379   15 VLVGMSILVSSLSSRLGIPILVIFLAVGMIAGNDGVGGIVfDNYPVAYLVGNLALAVILLDGGLRTRVSSFRVALWPALS 94
Cdd:pfam00999   3 LLILLALLAPLLARRLKLPPIVGLIIAGILLGPSGLGLIS-EVDEDLEVLSNLGLPPLLFLAGLELDLRELRKNGGSILL 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379   95 LATLGVLVTTGLTGIAAAWL-FDLHWMEGLLIGAIVGSTDAAAVFSLLGGKG-LNERVTATLEIESGSNDPMAVFLTVTL 172
Cdd:pfam00999  82 LALLGVLIPFVLIGLLLYLLgLGIPLLEALLFGAILSATSPVVVLAILKELGrVPERLGTLLLGESVLNDGVAVVLLAVL 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379  173 IEMLASGQTGLSWGFVLH-LVQQFGLGALLGLGGGWLLLQLINRMHLAGGLYPLLVISGGLLVFALANAVGGSGILAIYL 251
Cdd:pfam00999 162 LALAQGVGGGSDLGWLLLiFLVVAVGGLLLGLLIGWLLRLITRFTDDDRELEVLLVLLLALLAALLAEALGVSGILGAFL 241
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379  252 CGLLLGNRPIrsRHGILHMLDG-MAWLAQIGMFLVLGLLVTPHDLWPIALPALALALWMILVARPLSVLIGLIPFRaFHD 330
Cdd:pfam00999 242 AGLVLSEYPF--ANKLSEKLEPfGYGLFNPLFFVLVGLSLDLSSLLLSVWILVLLALVAILLGRFLGVFLLLRLLG-LSL 318
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 489186379  331 REKAFIAWVGL-RGAVPIILAVFPLMAGLPNAQLFFnVAFFIVLVSLLVQGTSLPW 385
Cdd:pfam00999 319 REALIIGFGGLqRGAVSLALAAIGPLLGIIARELYP-LLIVVVLFTVLVQGITLKP 373
a_cpa1 TIGR00831
Na+/H+ antiporter, bacterial form; The Monovalent Cation:Proton Antiporter-1 (CPA1) Family (TC ...
16-392 5.86e-15

Na+/H+ antiporter, bacterial form; The Monovalent Cation:Proton Antiporter-1 (CPA1) Family (TC 2.A.36) The CPA1 family is a large family of proteins derived from Gram-positive and Gram-negative bacteria, blue green bacteria, yeast, plants and animals. Transporters from eukaryotes have been functionally characterized, and all of these catalyze Na+:H+ exchange. Their primary physiological functions may be in (1) cytoplasmic pH regulation, extruding the H+ generated during metabolism, and (2) salt tolerance (in plants), due to Na+ uptake into vacuoles. This model is specific for the bacterial members of this family. [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 129911 [Multi-domain]  Cd Length: 525  Bit Score: 77.62  E-value: 5.86e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379   16 LVGMSILVSSLSSRLGIPILVIFLAVGMIAGNDGVGGIVFDNYPVAYLvgnLALAVILLDGGLRTRVSSFRVALWPALSL 95
Cdd:TIGR00831   6 LVMLATAVAVTVKFIRLPYPIALILAGLLLGLAGLLPEVPLDREIVLF---LFLPPLLFEAAMNTDLRELRENFRPIALI 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379   96 ATLGVLVTTGLTGIAAAWLFDLHWMEGLLIGAIVGSTDAAAVFSLLGGKGLNERVTATLEIESGSNDPMA-VFLTVTLIE 174
Cdd:TIGR00831  83 AFLLVVVTTVVVGFSLNWILGIPLALALILGAVLSPTDAVAVLGTFKSIRAPKKLSILLEGESLLNDGAAlVVFAIAVAV 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379  175 MLASGQTGlswgfVLHLVQQFGLGALLGLGGGWLLLQLINRMHLAGGLYPLLVISGGLLV----FALANAVGGSGILAIY 250
Cdd:TIGR00831 163 ALGKGVFD-----PLNAALDFAVVCVGGIAAGLAVGYLAYRLLRAKIDDPLVEIALTILApfagFLLAERFHFSGVIAVV 237
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379  251 LCGLLLGNR------PIRSRHGILHMLDGMAWLAQIGMFLVLGLLV--TPHDLWPIALPALALALWMILVA--------- 313
Cdd:TIGR00831 238 AAGLILTNYgrdfsmSPTTRLIALDFWSVIVFLVNGIIFILIGVQTpgTIFSAWKEILVAPAAVILALFTNafviypvmt 317
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379  314 --------RPLSVLIGLIPFRAFHDREKAFIAWVGLRGAVPIILAV-FPLM----AGLPNAQLFFNVAFFIVLVSLLVQG 380
Cdd:TIGR00831 318 yvrflwtmKPFSNRFLKKKPMEFGTRWKHVVSWAGLRGAIPLALALsFPNQllsgMAFPARYELVFLAAGVILFSLLVQG 397
                         410
                  ....*....|..
gi 489186379  381 TSLPWAARLLRV 392
Cdd:TIGR00831 398 ISLPIFVKRKFV 409
CorC_HlyC smart01091
Transporter associated domain; This small domain is found in a family of proteins with the ...
494-570 4.18e-14

Transporter associated domain; This small domain is found in a family of proteins with the DUF21 domain and two CBS domains with this domain found at the C-terminus of the proteins, the domain is also found at the C terminus of some Na+/H+ antiporters. This domain is also found in CorC that is involved in Magnesium and cobalt efflux. The function of this domain is uncertain but might be involved in modulating transport of ion substrates.


Pssm-ID: 215020 [Multi-domain]  Cd Length: 78  Bit Score: 67.47  E-value: 4.18e-14
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 489186379   494 RFFGDFVLEGDAQLSAVASLYGLKLDgIDGEQALGRFIAHEIGGEAVIGDQVEWNGLTWTVAALEGNRIRKVGVKFP 570
Cdd:smart01091   3 LDDGSYLVDGRTPIDDLNELLGLDLP-EEEYDTLGGLVLEELGRIPEVGDSVEIGGLRFEVLEVDGRRIDKVRVTRP 78
 
Name Accession Description Interval E-value
PRK05326 PRK05326
potassium/proton antiporter;
3-569 0e+00

potassium/proton antiporter;


Pssm-ID: 235410 [Multi-domain]  Cd Length: 562  Bit Score: 750.49  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379   3 AVTVNNFFLIGAVLVGMSILVSSLSSRLGIPILVIFLAVGMIAGNDGVGGIVFDNYPVAYLVGNLALAVILLDGGLRTRV 82
Cdd:PRK05326   1 MDTINSLLLIGALLLLLSILASRLSSRLGIPSLLLFLAIGMLAGEDGLGGIQFDNYPLAYLVGNLALAVILFDGGLRTRW 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379  83 SSFRVALWPALSLATLGVLVTTGLTGIAAAWLFDLHWMEGLLIGAIVGSTDAAAVFSLLGGKG--LNERVTATLEIESGS 160
Cdd:PRK05326  81 SSFRPALGPALSLATLGVLITAGLTGLFAHWLLGLDWLEGLLLGAIVGSTDAAAVFSLLRGKGlnLKERVASTLEIESGS 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379 161 NDPMAVFLTVTLIEMLASGQTGLSWGFVLHLVQQFGLGALLGLGGGWLLLQLINRMHL-AGGLYPLLVISGGLLVFALAN 239
Cdd:PRK05326 161 NDPMAVFLTITLIELITGGETGLSWGFLLLFLQQFGLGALIGLLGGWLLVQLLNRIALpAEGLYPILVLAGALLIFALTA 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379 240 AVGGSGILAIYLCGLLLGNRPIRSRHGILHMLDGMAWLAQIGMFLVLGLLVTPHDLWPIALPALALALWMILVARPLSVL 319
Cdd:PRK05326 241 ALGGSGFLAVYLAGLVLGNRPIRHRHSILRFFDGLAWLAQIGMFLVLGLLVTPSRLLDIALPALLLALFLILVARPLAVF 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379 320 IGLIPFRaFHDREKAFIAWVGLRGAVPIILAVFPLMAGLPNAQLFFNVAFFIVLVSLLVQGTSLPWAARLLRVVVPPDPA 399
Cdd:PRK05326 321 LSLLPFR-FNLREKLFISWVGLRGAVPIVLATFPMMAGLPNAQLIFNVVFFVVLVSLLLQGTTLPWAARKLGVVVPPEAR 399
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379 400 PISRAGLEIHPTSEWELFVYHLNKEKWCIGAALRELKMPGGTRIAALFRGTELLHPSGSTILEADDILCVIGHEHDLPAL 479
Cdd:PRK05326 400 PVSRVELDPLEESDAELLEYRVPAGSWLVGKALRDLRLPRGALIALIIRDGKLLVPTGSTRLKAGDVLLVLGPERDLPAL 479
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379 480 GKLFSQAPDRGLGARFFGDFVLEGDAQLSAVASLYGLKLDgidgEQALGRFIAHEIGGEAVIGDQVEWNGLTWTVAAleg 559
Cdd:PRK05326 480 ERLFSQSPPGKLDQRFFGDFILEGDAKLADLALIYGLELD----QQTLGELIKQRLGGAPVVGDQVELGGIILTVAE--- 552
                        570
                 ....*....|
gi 489186379 560 NRIRKVGVKF 569
Cdd:PRK05326 553 GRVTKVGLRL 562
NhaP2 COG3263
NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains [Energy ...
5-503 0e+00

NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains [Energy production and conversion, Inorganic ion transport and metabolism];


Pssm-ID: 442494 [Multi-domain]  Cd Length: 502  Bit Score: 650.25  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379   5 TVNNFFLIGAVLVGMSILVSSLSSRLGIPILVIFLAVGMIAGNDGVGGIVFDNYPVAYLVGNLALAVILLDGGLRTRVSS 84
Cdd:COG3263    3 TLNLILLIGALLLLLSILASKLSSRLGVPLLLLFLGIGMLAGEDGLGGIQFDDAELAQLIGSLALAVILFDGGLRTRWSS 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379  85 FRVALWPALSLATLGVLVTTGLTGIAAAWLFDLHWMEGLLIGAIVGSTDAAAVFSLLGGKG--LNERVTATLEIESGSND 162
Cdd:COG3263   83 FRPVLAPALSLATLGVLLTAGLTGVFAHWLLGLSWLEGLLLGAIVSSTDAAAVFSILRSKGlnLKERLASTLELESGSND 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379 163 PMAVFLTVTLIEMLASGQTGLsWGFVLHLVQQFGLGALLGLGGGWLLLQLINRMHL-AGGLYPLLVISGGLLVFALANAV 241
Cdd:COG3263  163 PMAVFLTIALIELITGGGASG-WSLLLLFVLQMGLGALVGLAGGWLGVWLLNRIRLpAEGLYPVLVLALALLAFGATALL 241
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379 242 GGSGILAIYLCGLLLGNRPIRSRHGILHMLDGMAWLAQIGMFLVLGLLVTPHDLWPIALPALALALWMILVARPLSVLIG 321
Cdd:COG3263  242 GGSGFLAVYLAGLVLGNRRLPHKKSILRFHDGLAWLAQIGMFLMLGLLVFPSRLLPVALPALLIALFLIFVARPLAVFLS 321
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379 322 LIPFRaFHDREKAFIAWVGLRGAVPIILAVFPLMAGLPNAQLFFNVAFFIVLVSLLVQGTSLPWAARLLRVVVPPDPAPI 401
Cdd:COG3263  322 LLPFR-FSWREKLFISWVGLRGAVPIVLATFPLLAGLPGAQLIFNVVFFVVLVSLLVQGTTLPPVARKLGLEVPPEPKPL 400
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379 402 SRAGLEIHPTSEWELFVYHLNKEKWCIGAALRELKMPGGTRIAALFRGTELLHPSGSTILEADDILCVIGHEHDLPALGK 481
Cdd:COG3263  401 TRVELELLEELDAELVEYRVPPGSPAVGKTLRELRLPEGALVVLIVRDGELLVPRGSTRLQAGDQLLVLAPPEDLEALER 480
                        490       500
                 ....*....|....*....|..
gi 489186379 482 LFSQAPDRGLGARFFGDFVLEG 503
Cdd:COG3263  481 LFAAVSRAGTLAEWFGDRVRLG 502
NhaP COG0025
NhaP-type Na+/H+ or K+/H+ antiporter [Inorganic ion transport and metabolism];
8-406 4.37e-57

NhaP-type Na+/H+ or K+/H+ antiporter [Inorganic ion transport and metabolism];


Pssm-ID: 439796 [Multi-domain]  Cd Length: 506  Bit Score: 199.42  E-value: 4.37e-57
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379   8 NFFLIGAVLVGMSILVSSLSSRLGIPILVIFLAVGMIAGnDGVGGIVFDNYPVAYLVGNLALAVILLDGGLRTRVSSFRV 87
Cdd:COG0025    2 ELLLLILLLLLLGLLSQWLARRLKLPAPLLLLLAGILLG-PGLGLELDPELGDLEPLLELFLPPLLFEAALNLDLRELRR 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379  88 ALWPALSLATLGVLVTTGLTGIAAAWLFDLHWMEGLLIGAIVGSTDAAAVFSLLGGKGLNERVTATLEIESGSNDPMAVF 167
Cdd:COG0025   81 NGRPILRLAVVGVLLTTLAVALAAHWLLGLPLAAALLLGAILAPTDPVAVSPILRRLGVPKRLRTILEGESLLNDATALV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379 168 LTVTLIEMLASGQTGLsWGFVLHLVQQFGLGALLGLGGGWLLLQLINRMHlAGGLYPLLVISGGLLVFALANAVGGSGIL 247
Cdd:COG0025  161 LFVLALAAALGGGFSL-GEALLDFLLAILGGILVGLLLGWLLGRLLRRLP-DPLLEILLTLALPFLAYLLAEALHGSGVL 238
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379 248 AIYLCGLLLGNR-----PIRSRHGILHMLDGMAWLAQIGMFLVLGLLVTPHDLWPIALPALALALWMILVARPLSVLIGL 322
Cdd:COG0025  239 AVVVAGLVLGNAgrrslSPETRLQLLEFWETLEFLLNSLLFVLLGAQLPLILLGALGLGGILLVLLALLVVRPLWVFLSL 318
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379 323 -IPFRAFHDREKAFIAWVGLRGAVPIILAVFPLM---AGLPNAQLFFNVAFFIVLVSLLVQGTSLPWAARLLRVVVPPDP 398
Cdd:COG0025  319 aLRGSRLSWRERLFLSWGGPRGIVSLALALSLPLhggAGFPGRDLILALAFGVILLTLVLQGLTLPPLARRLGLREDEPE 398

                 ....*...
gi 489186379 399 APISRAGL 406
Cdd:COG0025  399 GEELEAAL 406
Na_H_Exchanger pfam00999
Sodium/hydrogen exchanger family; Na/H antiporters are key transporters in maintaining the pH ...
15-385 1.81e-38

Sodium/hydrogen exchanger family; Na/H antiporters are key transporters in maintaining the pH of actively metabolising cells. The molecular mechanisms of antiport are unclear. These antiporters contain 10-12 transmembrane regions (M) at the amino-terminus and a large cytoplasmic region at the carboxyl terminus. The transmembrane regions M3-M12 share identity with other members of the family. The M6 and M7 regions are highly conserved. Thus, this is thought to be the region that is involved in the transport of sodium and hydrogen ions. The cytoplasmic region has little similarity throughout the family.


Pssm-ID: 425982 [Multi-domain]  Cd Length: 377  Bit Score: 145.48  E-value: 1.81e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379   15 VLVGMSILVSSLSSRLGIPILVIFLAVGMIAGNDGVGGIVfDNYPVAYLVGNLALAVILLDGGLRTRVSSFRVALWPALS 94
Cdd:pfam00999   3 LLILLALLAPLLARRLKLPPIVGLIIAGILLGPSGLGLIS-EVDEDLEVLSNLGLPPLLFLAGLELDLRELRKNGGSILL 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379   95 LATLGVLVTTGLTGIAAAWL-FDLHWMEGLLIGAIVGSTDAAAVFSLLGGKG-LNERVTATLEIESGSNDPMAVFLTVTL 172
Cdd:pfam00999  82 LALLGVLIPFVLIGLLLYLLgLGIPLLEALLFGAILSATSPVVVLAILKELGrVPERLGTLLLGESVLNDGVAVVLLAVL 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379  173 IEMLASGQTGLSWGFVLH-LVQQFGLGALLGLGGGWLLLQLINRMHLAGGLYPLLVISGGLLVFALANAVGGSGILAIYL 251
Cdd:pfam00999 162 LALAQGVGGGSDLGWLLLiFLVVAVGGLLLGLLIGWLLRLITRFTDDDRELEVLLVLLLALLAALLAEALGVSGILGAFL 241
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379  252 CGLLLGNRPIrsRHGILHMLDG-MAWLAQIGMFLVLGLLVTPHDLWPIALPALALALWMILVARPLSVLIGLIPFRaFHD 330
Cdd:pfam00999 242 AGLVLSEYPF--ANKLSEKLEPfGYGLFNPLFFVLVGLSLDLSSLLLSVWILVLLALVAILLGRFLGVFLLLRLLG-LSL 318
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 489186379  331 REKAFIAWVGL-RGAVPIILAVFPLMAGLPNAQLFFnVAFFIVLVSLLVQGTSLPW 385
Cdd:pfam00999 319 REALIIGFGGLqRGAVSLALAAIGPLLGIIARELYP-LLIVVVLFTVLVQGITLKP 373
KefB COG0475
Kef-type K+ transport system, membrane component KefB [Inorganic ion transport and metabolism]; ...
8-378 1.12e-15

Kef-type K+ transport system, membrane component KefB [Inorganic ion transport and metabolism];


Pssm-ID: 440243 [Multi-domain]  Cd Length: 384  Bit Score: 79.04  E-value: 1.12e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379   8 NFFLIGAVLVGMSILVSSLSSRLGIPILVIFLAVGMIAGNDGVGgiVFDNYPVAYLVGNLALAVILLDGGLRTRVSSFRV 87
Cdd:COG0475    4 SLLLQLGLLLLAAVLAGLLARRLGLPSVLGYILAGILLGPSGLG--LIEDSEALELLAELGVVLLLFLIGLELDLKRLRK 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379  88 ALWPALSLATLGVLVTTGLtGIAAAWLFDLHWMEGLLIGAIVGSTDAAAVFSLLGGKG-LNERVTATLEIESGSNDPMAV 166
Cdd:COG0475   82 MGRRALGIGLLQVLLPFLL-GFLLALLLGLSLAAALFLGAALAATSTAIVLKVLKELGlLKTPLGQLILGVALFDDIAAI 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379 167 FLTVTLIEMLASGQTGLSWGFVLHLVQQFGLGALLGLGGGWLLLQLINRMHLAGGLYPLLVISGGLLVFALANAVGGSGI 246
Cdd:COG0475  161 LLLALVPALAGGGSVAGSLLLALLKALLFLALLLLVGRYLLRRLFRLVARTRSRELFLLFALLLVLLAAALAELLGLSAA 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379 247 LAIYLCGLLLGNRPirSRHGILHMLDGMAWLAQIGMFLVLGLLVTPHDLWPIALPALALALWMIlVARPLSVLIGLIPFR 326
Cdd:COG0475  241 LGAFLAGLVLAESE--YRHELEEKIEPFGDLFLPLFFVSVGLSLDLSALLSNPLLALLLVLAAI-VGKLLGAYLAARLFG 317
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....
gi 489186379 327 AfhDREKAFIAWVGL--RGAVPIILAVFPLMAGLPNAQLfFNVAFFIVLVSLLV 378
Cdd:COG0475  318 L--SRREALRIGLLLapRGEFALVLASLGLSAGLISPEL-FAALVLVVLLTTLL 368
a_cpa1 TIGR00831
Na+/H+ antiporter, bacterial form; The Monovalent Cation:Proton Antiporter-1 (CPA1) Family (TC ...
16-392 5.86e-15

Na+/H+ antiporter, bacterial form; The Monovalent Cation:Proton Antiporter-1 (CPA1) Family (TC 2.A.36) The CPA1 family is a large family of proteins derived from Gram-positive and Gram-negative bacteria, blue green bacteria, yeast, plants and animals. Transporters from eukaryotes have been functionally characterized, and all of these catalyze Na+:H+ exchange. Their primary physiological functions may be in (1) cytoplasmic pH regulation, extruding the H+ generated during metabolism, and (2) salt tolerance (in plants), due to Na+ uptake into vacuoles. This model is specific for the bacterial members of this family. [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 129911 [Multi-domain]  Cd Length: 525  Bit Score: 77.62  E-value: 5.86e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379   16 LVGMSILVSSLSSRLGIPILVIFLAVGMIAGNDGVGGIVFDNYPVAYLvgnLALAVILLDGGLRTRVSSFRVALWPALSL 95
Cdd:TIGR00831   6 LVMLATAVAVTVKFIRLPYPIALILAGLLLGLAGLLPEVPLDREIVLF---LFLPPLLFEAAMNTDLRELRENFRPIALI 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379   96 ATLGVLVTTGLTGIAAAWLFDLHWMEGLLIGAIVGSTDAAAVFSLLGGKGLNERVTATLEIESGSNDPMA-VFLTVTLIE 174
Cdd:TIGR00831  83 AFLLVVVTTVVVGFSLNWILGIPLALALILGAVLSPTDAVAVLGTFKSIRAPKKLSILLEGESLLNDGAAlVVFAIAVAV 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379  175 MLASGQTGlswgfVLHLVQQFGLGALLGLGGGWLLLQLINRMHLAGGLYPLLVISGGLLV----FALANAVGGSGILAIY 250
Cdd:TIGR00831 163 ALGKGVFD-----PLNAALDFAVVCVGGIAAGLAVGYLAYRLLRAKIDDPLVEIALTILApfagFLLAERFHFSGVIAVV 237
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379  251 LCGLLLGNR------PIRSRHGILHMLDGMAWLAQIGMFLVLGLLV--TPHDLWPIALPALALALWMILVA--------- 313
Cdd:TIGR00831 238 AAGLILTNYgrdfsmSPTTRLIALDFWSVIVFLVNGIIFILIGVQTpgTIFSAWKEILVAPAAVILALFTNafviypvmt 317
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379  314 --------RPLSVLIGLIPFRAFHDREKAFIAWVGLRGAVPIILAV-FPLM----AGLPNAQLFFNVAFFIVLVSLLVQG 380
Cdd:TIGR00831 318 yvrflwtmKPFSNRFLKKKPMEFGTRWKHVVSWAGLRGAIPLALALsFPNQllsgMAFPARYELVFLAAGVILFSLLVQG 397
                         410
                  ....*....|..
gi 489186379  381 TSLPWAARLLRV 392
Cdd:TIGR00831 398 ISLPIFVKRKFV 409
CorC_HlyC smart01091
Transporter associated domain; This small domain is found in a family of proteins with the ...
494-570 4.18e-14

Transporter associated domain; This small domain is found in a family of proteins with the DUF21 domain and two CBS domains with this domain found at the C-terminus of the proteins, the domain is also found at the C terminus of some Na+/H+ antiporters. This domain is also found in CorC that is involved in Magnesium and cobalt efflux. The function of this domain is uncertain but might be involved in modulating transport of ion substrates.


Pssm-ID: 215020 [Multi-domain]  Cd Length: 78  Bit Score: 67.47  E-value: 4.18e-14
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 489186379   494 RFFGDFVLEGDAQLSAVASLYGLKLDgIDGEQALGRFIAHEIGGEAVIGDQVEWNGLTWTVAALEGNRIRKVGVKFP 570
Cdd:smart01091   3 LDDGSYLVDGRTPIDDLNELLGLDLP-EEEYDTLGGLVLEELGRIPEVGDSVEIGGLRFEVLEVDGRRIDKVRVTRP 78
CorC_HlyC pfam03471
Transporter associated domain; This small domain is found in a family of proteins with the ...
494-571 2.21e-11

Transporter associated domain; This small domain is found in a family of proteins with the pfam01595 domain and two CBS domains with this domain found at the C-terminus of the proteins, the domain is also found at the C terminus of some Na+/H+ antiporters. This domain is also found in CorC that is involved in Magnesium and cobalt efflux. The function of this domain is uncertain but might be involved in modulating transport of ion substrates.


Pssm-ID: 460935 [Multi-domain]  Cd Length: 81  Bit Score: 59.87  E-value: 2.21e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379  494 RFFGDFVLEGDAQLSAVASLYGLKLDGIDGEqALGRFIAHEIGGEAVIGDQ--VEWNGLTWTVAALEGNRIRKVGVKFPE 571
Cdd:pfam03471   3 LDDGSYLVDGRAPLDDLNELLGLELPEEDYD-TLGGLVLERLGRIPKVGDKveVELGGLRFTVLEMDGRRIKKVRITKLE 81
TrkA_C pfam02080
TrkA-C domain; This domain is often found next to the pfam02254 domain. The exact function of ...
421-483 7.80e-10

TrkA-C domain; This domain is often found next to the pfam02254 domain. The exact function of this domain is unknown. It has been suggested that it may bind an unidentified ligand. The domain is predicted to adopt an all beta structure.


Pssm-ID: 460440 [Multi-domain]  Cd Length: 70  Bit Score: 55.31  E-value: 7.80e-10
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 489186379  421 LNKEKWCIGAALRELKMP--GGTRIAALFRGTELLHPSGSTILEADDILCVIGHEHDLPALGKLF 483
Cdd:pfam02080   6 VPENSPLVGKTLKELNLPerFGVRIVAIRRGGRLIIPSGDTVLEAGDRLLVIGTPDDLAALRELL 70
b_cpa1 TIGR00840
sodium/hydrogen exchanger 3; The Monovalent Cation:Proton Antiporter-1 (CPA1) Family (TC 2.A. ...
34-392 8.89e-09

sodium/hydrogen exchanger 3; The Monovalent Cation:Proton Antiporter-1 (CPA1) Family (TC 2.A.36)The CPA1 family is a large family of proteins derived from Gram-positive and Gram-negative bacteria, blue green bacteria, yeast, plants and animals.Transporters from eukaryotes have been functionally characterized, and all of these catalyze Na+:H+ exchange. Their primary physiological functions may be in(1) cytoplasmic pH regulation, extruding the H+ generated during metabolism, and (2) salt tolerance (in plants), due to Na+ uptake into vacuoles.This model is specific for the eukaryotic members members of this family. [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273294 [Multi-domain]  Cd Length: 559  Bit Score: 58.25  E-value: 8.89e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379   34 ILVIFLAVGMIAGNDGVGGIVFDnypvAYLVGNLALAVILLDGGLRTRVSSFRVALWPALSLATLGVLVTTGLTGIA--A 111
Cdd:TIGR00840  42 IVYGLLVGGIIKASPHIDPPTLD----SSYFFLYLLPPIVLDAGYFMPQRNFFENLGSILIFAVVGTLINAFVIGLSlyG 117
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379  112 AWLF------DLHWMEGLLIGAIVGSTDAAAVFSLLGGKGLNERVTATLEIESGSNDPMAVFLTVTLIEMLASGQTGLSW 185
Cdd:TIGR00840 118 ICLIggfgsiDIGLLDNLLFGSLISAVDPVAVLAVFEEYHVNEKLYIIIFGESLLNDAVTVVLYNTFIKFHKTADEPVTI 197
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379  186 -----GFVLHLVQQFGLGALLGLGGGWLLLQLINrMHLAGGLYPLLVISGGLLVFALANAVGGSGILAIYLCGLLL---- 256
Cdd:TIGR00840 198 vdvfeGCASFFVVTCGGLLVGVVFGFLVAFITRF-THHIRQIEPLFVFLISYLSYLFAETLHLSGILALIFCGITMkkyv 276
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379  257 -GNRPIRSRHGILHMLDGMAWLAQIGMFLVLGL-LVTPHDLWP---IALPALALALWMILVARPLSVLIGLIPFRAFHDR 331
Cdd:TIGR00840 277 eANMSRRSQTTIKYFMKMLSSLSETLIFIFLGVsLVTENHEWNwafVVATLSFCVIYRVLGVRTLSWITNEFRPVEIPYK 356
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 489186379  332 EKAFIAWVGLRGAVPIILAVFPLMAGLPNAQLFFNVAFFIVLVSLLVQGTSLPWAARLLRV 392
Cdd:TIGR00840 357 DQLVIFYAGLRGAVAFALALLLDEKIFPYKFLFVTTTLVVVFFTVIFQGGTIKPLVEVLKV 417
trkA PRK09496
Trk system potassium transporter TrkA;
428-483 4.95e-07

Trk system potassium transporter TrkA;


Pssm-ID: 236541 [Multi-domain]  Cd Length: 453  Bit Score: 52.43  E-value: 4.95e-07
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 489186379 428 IGAALRELKM---PGGTRIAALFRGTELLHPSGSTILEADDILCVIGHEHDLPALGKLF 483
Cdd:PRK09496 166 VGKPLSDLREhfpDIDVRVVAIFRGGRLIIPRGDTVIEAGDEVYFIGAREHIRAVMSEF 224
TlyC COG1253
Hemolysin-related protein, contains CBS domains, UPF0053 family [General function prediction ...
497-568 1.14e-05

Hemolysin-related protein, contains CBS domains, UPF0053 family [General function prediction only];


Pssm-ID: 440865 [Multi-domain]  Cd Length: 435  Bit Score: 47.81  E-value: 1.14e-05
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 489186379 497 GDFVLEGDAQLSAVASLYGLKLDGIDGEQALGRFIAHEIGGEAVIGDQVEWNGLTWTVAALEGNRIRKVGVK 568
Cdd:COG1253  355 GSYLVDGRLPIDELNELLGLDLPEEEDYETLGGLVLEQLGRIPEVGETVEVDGLRFEVLDMDGRRIDKVLVT 426
trkA PRK09496
Trk system potassium transporter TrkA;
406-483 4.38e-05

Trk system potassium transporter TrkA;


Pssm-ID: 236541 [Multi-domain]  Cd Length: 453  Bit Score: 46.27  E-value: 4.38e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379 406 LEIHPTSEwelfvyhlnkekwCIGAALRELKMPGGTRIAALFRGTELLHPSGSTILEADD--ILCVIgHEHDLPALGKLF 483
Cdd:PRK09496 383 AVAHETSK-------------VVGKPLKDLKLPKGVLIGAIVRGGEVIIPTGDTVIEPGDhvIVFVL-DKKFVPDVEKLF 448
TrkA COG0569
Trk/Ktr K+ transport system regulatory component TrkA/KtrA/KtrC, RCK domain [Inorganic ion ...
413-467 2.39e-04

Trk/Ktr K+ transport system regulatory component TrkA/KtrA/KtrC, RCK domain [Inorganic ion transport and metabolism, Signal transduction mechanisms];


Pssm-ID: 440335 [Multi-domain]  Cd Length: 296  Bit Score: 43.52  E-value: 2.39e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 489186379 413 EWELFVYHLNKEKWCIGAALRELKMP--GGTRIAALFRGTELLHPSGSTILEADDIL 467
Cdd:COG0569  239 DAEIVEVTVPEGSPLVGKTLKELDLRerYGVTVVAIKRGGEVIIPSGDTVLEAGDEL 295
KhtT COG0490
K+/H+ antiporter KhtSTU, c-di-AMP-binding regulatory subunit KhtT, contains RCK_C (TrkA_C) ...
356-483 7.12e-04

K+/H+ antiporter KhtSTU, c-di-AMP-binding regulatory subunit KhtT, contains RCK_C (TrkA_C) domain [Inorganic ion transport and metabolism, Signal transduction mechanisms];


Pssm-ID: 440256 [Multi-domain]  Cd Length: 140  Bit Score: 40.29  E-value: 7.12e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489186379 356 AGLPNAQLFFNVAFFIVLVSLLVQGTSLPWAARLLRVVVPPDPAPISRAGLEIHPTSEWELFVYHLNKEKWCIGAALREL 435
Cdd:COG0490   10 IILLLLLALAALLVAIVIVGVLGLILRGLLLLELALLLLLLGELLRLLTRLLIELVLLLAIEEVKVPPGSPLVGKTLGEL 89
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|.
gi 489186379 436 KMPG--GTRIAALFRGTE-LLHPSGSTILEADDILCVIGHEHDLPALGKLF 483
Cdd:COG0490   90 NLRQrtGVTVVAIRRGGEvILSPGPDTVLEAGDTLVVVGTREQLERLEELL 140
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH