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Concise Results
Standard Results
Full Results
MULTISPECIES: APC family permease [Pseudomonas]
Protein Classification
APC family permease ( domain architecture ID 11425014 )
APC (amino acid/polyamine/organocation) family permease is involved in the uptake of a specific amino acid and/or polyamine substrate with the concomitant import of a proton
List of domain hits
Name
Accession
Description
Interval
E-value
PotE
COG0531 Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
4-454
1.21e-41
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
Pssm-ID: 440297 [Multi-domain]
Cd Length: 438
Bit Score: 154.28
E-value: 1.21e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489183910 4 SR LTQHL L RGRV G FPTAL A SS VG L I MASPVILTATTGF GL G G GTFAV A M L V A L LL M L AQSTTF AE A A CLL P TR G SV Y D Y L 83
Cdd:COG0531 2 SR GESSE L KRKL G LFDLV A LG VG A I IGAGIFVLPGLAA GL A G PAAIL A W L I A G LL A L LVALSY AE L A SAF P RA G GA Y T Y A 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489183910 84 SCG LG RFFA - IT G tl S A Y L IVH V F A GT A ETMLS G TMALVN F eslntlte P G GG AW L VGVGMV L CFG LLN AL G ITAFGRAE 162
Cdd:COG0531 82 RRA LG PLLG f LA G -- W A L L LSY V L A VA A VAVAF G GYLSSL F -------- P A GG SV L IALVLI L LLT LLN LR G VKESAKVN 151
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489183910 163 V ILT FGMWST L MI F A V A GL LRLPAVELQGWFG A smv G DD L PTL L SLVGM A M F M F V G C E FVTP LA P E VRHAS R TL PRA MA L 242
Cdd:COG0531 152 N ILT VLKLLV L LL F I V V GL FAFDPANFTPFLP A --- G GG L SGV L AALAL A F F A F T G F E AIAN LA E E AKNPK R NI PRA II L 228
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489183910 243 G L VG V ACCMF L YGA A M rrqven LDLGGGLH L LETPMAIPRF AE Q V M GP F G R I WLGV G L L FAGAATI N TLMA G LP R I LY G M 322
Cdd:COG0531 229 S L LI V GVLYI L VSL A L ------ TGVVPYDE L AASGAPLADA AE A V F GP W G A I LIAL G A L LSLLGAL N ASIL G AS R L LY A M 302
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489183910 323 A L DG A LPK A F TYL HPRF K TP LLC I AVAAA I PC L HAWWLGGD seg IIH L VLA A VCAWGT AYLLV T L S V VL LR I RRPDLPR A 402
Cdd:COG0531 303 A R DG L LPK V F AKV HPRF G TP VNA I LLTGV I AL L LLLLGAAS --- FTA L ASL A SVGVLL AYLLV A L A V IV LR R RRPDLPR P 379
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 489183910 403 Y R S P l F PL PQLFSSAGI L LGMFYIT P PGM npadiy L PFALM L GLAAAYA L FW 454
Cdd:COG0531 380 F R V P - L PL IPILGILLC L FLLYLLG P GAL ------ L IGLVL L AIGLLLY L LY 424
Name
Accession
Description
Interval
E-value
PotE
COG0531 Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
4-454
1.21e-41
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
Pssm-ID: 440297 [Multi-domain]
Cd Length: 438
Bit Score: 154.28
E-value: 1.21e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489183910 4 SR LTQHL L RGRV G FPTAL A SS VG L I MASPVILTATTGF GL G G GTFAV A M L V A L LL M L AQSTTF AE A A CLL P TR G SV Y D Y L 83
Cdd:COG0531 2 SR GESSE L KRKL G LFDLV A LG VG A I IGAGIFVLPGLAA GL A G PAAIL A W L I A G LL A L LVALSY AE L A SAF P RA G GA Y T Y A 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489183910 84 SCG LG RFFA - IT G tl S A Y L IVH V F A GT A ETMLS G TMALVN F eslntlte P G GG AW L VGVGMV L CFG LLN AL G ITAFGRAE 162
Cdd:COG0531 82 RRA LG PLLG f LA G -- W A L L LSY V L A VA A VAVAF G GYLSSL F -------- P A GG SV L IALVLI L LLT LLN LR G VKESAKVN 151
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489183910 163 V ILT FGMWST L MI F A V A GL LRLPAVELQGWFG A smv G DD L PTL L SLVGM A M F M F V G C E FVTP LA P E VRHAS R TL PRA MA L 242
Cdd:COG0531 152 N ILT VLKLLV L LL F I V V GL FAFDPANFTPFLP A --- G GG L SGV L AALAL A F F A F T G F E AIAN LA E E AKNPK R NI PRA II L 228
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489183910 243 G L VG V ACCMF L YGA A M rrqven LDLGGGLH L LETPMAIPRF AE Q V M GP F G R I WLGV G L L FAGAATI N TLMA G LP R I LY G M 322
Cdd:COG0531 229 S L LI V GVLYI L VSL A L ------ TGVVPYDE L AASGAPLADA AE A V F GP W G A I LIAL G A L LSLLGAL N ASIL G AS R L LY A M 302
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489183910 323 A L DG A LPK A F TYL HPRF K TP LLC I AVAAA I PC L HAWWLGGD seg IIH L VLA A VCAWGT AYLLV T L S V VL LR I RRPDLPR A 402
Cdd:COG0531 303 A R DG L LPK V F AKV HPRF G TP VNA I LLTGV I AL L LLLLGAAS --- FTA L ASL A SVGVLL AYLLV A L A V IV LR R RRPDLPR P 379
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 489183910 403 Y R S P l F PL PQLFSSAGI L LGMFYIT P PGM npadiy L PFALM L GLAAAYA L FW 454
Cdd:COG0531 380 F R V P - L PL IPILGILLC L FLLYLLG P GAL ------ L IGLVL L AIGLLLY L LY 424
AA_permease_2
pfam13520 Amino acid permease;
66-444
2.18e-16
Amino acid permease;
Pssm-ID: 404414 [Multi-domain]
Cd Length: 427
Bit Score: 81.20
E-value: 2.18e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489183910 66 F AE AACL LP TR G SV Y D YL SCGL G R F F A - IT G TLSAYLI V HVF A GT A e TMLSGTMALVNFES L NTL T EP ggg AWLVGVGMV 144
Cdd:pfam13520 51 Y AE LSSA LP RS G GI Y V YL ENAF G K F V A f LA G WSNWFAY V LGL A SS A - SVAASYLLSALGPD L VPT T WL --- TYGIAIAIL 126
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489183910 145 LC F GLL N AL G ITAFGRAEV IL T --- FGMWST L M I FAVAGLLRLPAVE L QGWFGASMVG D DL P TLLSLVGMAMFM F V G C E F 221
Cdd:pfam13520 127 II F AII N IR G VRESAKIQN IL G ilk LLLPLI L I I ILGLVTADGGGFN L LSGEWHTFFP D GW P GVFAGFLGVLWS F T G F E S 206
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489183910 222 VTPLAP EV RH as R TL P R A MAL G LVG V ACCMF L YGA A MR r Q V ENL D LGGGLHL L ETPM A I pr FAEQ V M G PF G R I WLGVG L L 301
Cdd:pfam13520 207 AANVSE EV KK -- R NV P K A IFI G VII V GVLYI L VNI A FF - G V VPD D EIALSSG L GQVA A L -- LFQA V G G KW G A I IVVIL L A 281
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489183910 302 FAGAATI NT LMA G LP R I LY GM A L DG A LP KAFTYLHP - R F KT P LLC I AVA A AIPCLHAWWLGGDSEGIIH L VLAAVCAWGT 380
Cdd:pfam13520 282 LSLLGAV NT AIV G AS R L LY AL A R DG V LP FSRFFAKV n K F GS P IRA I ILT A ILSLILLLLFLLSPAAYNA L LSLSAYGYLL 361
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 489183910 381 A YLL VTLSVVL LR IR RPDL P R A - Y R S P LFPLPQ LFS SAG I LLGM F YITP P GMNPADI Y LPFALML 444
Cdd:pfam13520 362 S YLL PIIGLLI LR KK RPDL G R I p G R W P VAIFGI LFS LFL I VALF F PPVG P ATGSSLN Y AIILIVA 426
PRK11021
PRK11021 putative transporter; Provisional
129-368
5.25e-07
putative transporter; Provisional
Pssm-ID: 236823 [Multi-domain]
Cd Length: 410
Bit Score: 51.83
E-value: 5.25e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489183910 129 LTEPGGGAW L VGVGMVLCFG LLN AL G ITAFGRAEVILTFGMWSTLMIFAV AG LLRLPAVEL qgwfg ASMVGDDLPT L LSL 208
Cdd:PRK11021 108 FGWSSWQLL L AELLTLALLW LLN LR G ASSSANLQTVIALLIVALVVAIWW AG DIKPADIPF ----- PAPGSIEWSG L FAA 182
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489183910 209 V G MAMFM FVG C E FVTP LA P E VRHAS R TL PRA MAL G -- L V G V --- AC CMFL -- YG A AMRR Q VENL dlggglhlletpm AI P 281
Cdd:PRK11021 183 L G VMFWC FVG I E AFAH LA S E FKNPE R DF PRA LMI G ll L A G L vyw AC TVVV lh FP A YGDK Q AAAA ------------- SL P 249
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489183910 282 RFAE Q VM G PFGRIWLG V GLLF A GA A TI N TLMAGLP R ILYGM A LD G AL P KAFTY L HP R f KT P --- L LCIAVAA A IPC L HAW 358
Cdd:PRK11021 250 GIFV Q LF G GYALWVIC V IGYL A CF A SV N IYTQSFA R LVWSQ A RE G RP P SYLAR L SA R - GV P vna L NAVLGCC A VSI L LIY 328
250
....*....|
gi 489183910 359 W LG GDS E GI I 368
Cdd:PRK11021 329 A LG LNL E AL I 338
2A0303
TIGR00906 cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ...
66-357
6.91e-07
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273330 [Multi-domain]
Cd Length: 557
Bit Score: 51.74
E-value: 6.91e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489183910 66 F AE AACLL P TR GS V Y D Y LSCGL G RFF A - ITG tls AY LI VHVFA GTA ETM -- L S GTMA - L V N ------ FESLNT L TEP G GG 135
Cdd:TIGR00906 82 Y AE FGARV P KA GS A Y L Y SYVTV G ELW A f ITG --- WN LI LEYVI GTA AVA rs W S AYFD e L L N kqigqf RRTYFK L NYD G LA 158
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489183910 136 AWL -- VG V GMV L CFGL L NAL G ITAFGRAEV I L T FGMWST L MIFAV AG LLR l PA V ELQGWFGASMV G DDL P ---- TL LS LV 209
Cdd:TIGR00906 159 EYP df FA V CLI L LLAV L LSF G VKESAWVNK I F T AINILV L LFVII AG FTK - AD V ANWSITEEKGA G GFM P ygft GV LS GA 237
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489183910 210 GMAM F M F V G CEFVTPLAP EV RHAS R TL P RAMALG L VGVACCM FL YG AA M rrqvenl D L GGGLH LL ETPMAI P RFA E Q V MG 289
Cdd:TIGR00906 238 ATCF F A F I G FDAIATTGE EV KNPQ R AI P IGIVTS L LVCFVAY FL MS AA L ------- T L MMPYY LL DPDAPF P VAF E Y V GW 310
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 489183910 290 PFGRIWLG VG L L FAGAATINTL M AG LPR IL Y G MA L DG A L P K AFTYLHPRF KTP LLCIA V AA AI PC L H A 357
Cdd:TIGR00906 311 DPAKYIVA VG A L CGMSTSLLGG M FP LPR VI Y A MA R DG L L F K WLAQINSKT KTP INATV V SG AI AA L M A 378
Name
Accession
Description
Interval
E-value
PotE
COG0531 Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
4-454
1.21e-41
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
Pssm-ID: 440297 [Multi-domain]
Cd Length: 438
Bit Score: 154.28
E-value: 1.21e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489183910 4 SR LTQHL L RGRV G FPTAL A SS VG L I MASPVILTATTGF GL G G GTFAV A M L V A L LL M L AQSTTF AE A A CLL P TR G SV Y D Y L 83
Cdd:COG0531 2 SR GESSE L KRKL G LFDLV A LG VG A I IGAGIFVLPGLAA GL A G PAAIL A W L I A G LL A L LVALSY AE L A SAF P RA G GA Y T Y A 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489183910 84 SCG LG RFFA - IT G tl S A Y L IVH V F A GT A ETMLS G TMALVN F eslntlte P G GG AW L VGVGMV L CFG LLN AL G ITAFGRAE 162
Cdd:COG0531 82 RRA LG PLLG f LA G -- W A L L LSY V L A VA A VAVAF G GYLSSL F -------- P A GG SV L IALVLI L LLT LLN LR G VKESAKVN 151
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489183910 163 V ILT FGMWST L MI F A V A GL LRLPAVELQGWFG A smv G DD L PTL L SLVGM A M F M F V G C E FVTP LA P E VRHAS R TL PRA MA L 242
Cdd:COG0531 152 N ILT VLKLLV L LL F I V V GL FAFDPANFTPFLP A --- G GG L SGV L AALAL A F F A F T G F E AIAN LA E E AKNPK R NI PRA II L 228
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489183910 243 G L VG V ACCMF L YGA A M rrqven LDLGGGLH L LETPMAIPRF AE Q V M GP F G R I WLGV G L L FAGAATI N TLMA G LP R I LY G M 322
Cdd:COG0531 229 S L LI V GVLYI L VSL A L ------ TGVVPYDE L AASGAPLADA AE A V F GP W G A I LIAL G A L LSLLGAL N ASIL G AS R L LY A M 302
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489183910 323 A L DG A LPK A F TYL HPRF K TP LLC I AVAAA I PC L HAWWLGGD seg IIH L VLA A VCAWGT AYLLV T L S V VL LR I RRPDLPR A 402
Cdd:COG0531 303 A R DG L LPK V F AKV HPRF G TP VNA I LLTGV I AL L LLLLGAAS --- FTA L ASL A SVGVLL AYLLV A L A V IV LR R RRPDLPR P 379
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 489183910 403 Y R S P l F PL PQLFSSAGI L LGMFYIT P PGM npadiy L PFALM L GLAAAYA L FW 454
Cdd:COG0531 380 F R V P - L PL IPILGILLC L FLLYLLG P GAL ------ L IGLVL L AIGLLLY L LY 424
AA_permease_2
pfam13520 Amino acid permease;
66-444
2.18e-16
Amino acid permease;
Pssm-ID: 404414 [Multi-domain]
Cd Length: 427
Bit Score: 81.20
E-value: 2.18e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489183910 66 F AE AACL LP TR G SV Y D YL SCGL G R F F A - IT G TLSAYLI V HVF A GT A e TMLSGTMALVNFES L NTL T EP ggg AWLVGVGMV 144
Cdd:pfam13520 51 Y AE LSSA LP RS G GI Y V YL ENAF G K F V A f LA G WSNWFAY V LGL A SS A - SVAASYLLSALGPD L VPT T WL --- TYGIAIAIL 126
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489183910 145 LC F GLL N AL G ITAFGRAEV IL T --- FGMWST L M I FAVAGLLRLPAVE L QGWFGASMVG D DL P TLLSLVGMAMFM F V G C E F 221
Cdd:pfam13520 127 II F AII N IR G VRESAKIQN IL G ilk LLLPLI L I I ILGLVTADGGGFN L LSGEWHTFFP D GW P GVFAGFLGVLWS F T G F E S 206
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489183910 222 VTPLAP EV RH as R TL P R A MAL G LVG V ACCMF L YGA A MR r Q V ENL D LGGGLHL L ETPM A I pr FAEQ V M G PF G R I WLGVG L L 301
Cdd:pfam13520 207 AANVSE EV KK -- R NV P K A IFI G VII V GVLYI L VNI A FF - G V VPD D EIALSSG L GQVA A L -- LFQA V G G KW G A I IVVIL L A 281
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489183910 302 FAGAATI NT LMA G LP R I LY GM A L DG A LP KAFTYLHP - R F KT P LLC I AVA A AIPCLHAWWLGGDSEGIIH L VLAAVCAWGT 380
Cdd:pfam13520 282 LSLLGAV NT AIV G AS R L LY AL A R DG V LP FSRFFAKV n K F GS P IRA I ILT A ILSLILLLLFLLSPAAYNA L LSLSAYGYLL 361
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 489183910 381 A YLL VTLSVVL LR IR RPDL P R A - Y R S P LFPLPQ LFS SAG I LLGM F YITP P GMNPADI Y LPFALML 444
Cdd:pfam13520 362 S YLL PIIGLLI LR KK RPDL G R I p G R W P VAIFGI LFS LFL I VALF F PPVG P ATGSSLN Y AIILIVA 426
PRK11021
PRK11021 putative transporter; Provisional
129-368
5.25e-07
putative transporter; Provisional
Pssm-ID: 236823 [Multi-domain]
Cd Length: 410
Bit Score: 51.83
E-value: 5.25e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489183910 129 LTEPGGGAW L VGVGMVLCFG LLN AL G ITAFGRAEVILTFGMWSTLMIFAV AG LLRLPAVEL qgwfg ASMVGDDLPT L LSL 208
Cdd:PRK11021 108 FGWSSWQLL L AELLTLALLW LLN LR G ASSSANLQTVIALLIVALVVAIWW AG DIKPADIPF ----- PAPGSIEWSG L FAA 182
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489183910 209 V G MAMFM FVG C E FVTP LA P E VRHAS R TL PRA MAL G -- L V G V --- AC CMFL -- YG A AMRR Q VENL dlggglhlletpm AI P 281
Cdd:PRK11021 183 L G VMFWC FVG I E AFAH LA S E FKNPE R DF PRA LMI G ll L A G L vyw AC TVVV lh FP A YGDK Q AAAA ------------- SL P 249
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489183910 282 RFAE Q VM G PFGRIWLG V GLLF A GA A TI N TLMAGLP R ILYGM A LD G AL P KAFTY L HP R f KT P --- L LCIAVAA A IPC L HAW 358
Cdd:PRK11021 250 GIFV Q LF G GYALWVIC V IGYL A CF A SV N IYTQSFA R LVWSQ A RE G RP P SYLAR L SA R - GV P vna L NAVLGCC A VSI L LIY 328
250
....*....|
gi 489183910 359 W LG GDS E GI I 368
Cdd:PRK11021 329 A LG LNL E AL I 338
2A0303
TIGR00906 cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ...
66-357
6.91e-07
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273330 [Multi-domain]
Cd Length: 557
Bit Score: 51.74
E-value: 6.91e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489183910 66 F AE AACLL P TR GS V Y D Y LSCGL G RFF A - ITG tls AY LI VHVFA GTA ETM -- L S GTMA - L V N ------ FESLNT L TEP G GG 135
Cdd:TIGR00906 82 Y AE FGARV P KA GS A Y L Y SYVTV G ELW A f ITG --- WN LI LEYVI GTA AVA rs W S AYFD e L L N kqigqf RRTYFK L NYD G LA 158
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489183910 136 AWL -- VG V GMV L CFGL L NAL G ITAFGRAEV I L T FGMWST L MIFAV AG LLR l PA V ELQGWFGASMV G DDL P ---- TL LS LV 209
Cdd:TIGR00906 159 EYP df FA V CLI L LLAV L LSF G VKESAWVNK I F T AINILV L LFVII AG FTK - AD V ANWSITEEKGA G GFM P ygft GV LS GA 237
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489183910 210 GMAM F M F V G CEFVTPLAP EV RHAS R TL P RAMALG L VGVACCM FL YG AA M rrqvenl D L GGGLH LL ETPMAI P RFA E Q V MG 289
Cdd:TIGR00906 238 ATCF F A F I G FDAIATTGE EV KNPQ R AI P IGIVTS L LVCFVAY FL MS AA L ------- T L MMPYY LL DPDAPF P VAF E Y V GW 310
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 489183910 290 PFGRIWLG VG L L FAGAATINTL M AG LPR IL Y G MA L DG A L P K AFTYLHPRF KTP LLCIA V AA AI PC L H A 357
Cdd:TIGR00906 311 DPAKYIVA VG A L CGMSTSLLGG M FP LPR VI Y A MA R DG L L F K WLAQINSKT KTP INATV V SG AI AA L M A 378
2A0308
TIGR00911 L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
66-453
1.32e-06
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273332 [Multi-domain]
Cd Length: 501
Bit Score: 50.90
E-value: 1.32e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489183910 66 F AE AACLL P TR G SV Y D Y LSCGL G RFF A ITGTLSAY L IVHVFAGTAETMLSGTMA L VNF es LNTLTE P GGGAW LV G V GM VL 145
Cdd:TIGR00911 97 Y AE LGTTI P KS G GE Y N Y ILEVF G PLL A FLRLWIEL L VIRPGSQAVNALNFAIYI L TPV -- FPDCEV P EWAIR LV A V LC VL 174
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489183910 146 CFG L L N A L GITAFG R AEV I L T FGMWST L MIFAVA G LLR L PAVELQ g WFGASMVGDDLP T LLSLVGM A ---- MFMFV G CEF 221
Cdd:TIGR00911 175 LLT L V N C L SVKWAT R VQD I F T ACKLLA L LLIIIT G WVQ L GKGGVE - SLNPKNAFEGTE T SAGGIVL A fysg IWAYG G WNY 253
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489183910 222 VTPLAP EV RHAS RTLP R A MALGLVG V ACCMF L ---- Y GAAMRRQ venldlggg LH L LETPM A IP r F A E QVM G PFGRIW - L 296
Cdd:TIGR00911 254 LNFVTE EV KNPY RTLP I A IIISMPI V TFIYV L tnia Y FTVLSPE --------- EL L ASLAV A VD - F G E RLL G VMSWAM p A 323
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489183910 297 G VGL LFA G aa TI N TLMAGLP R ILYGMALD G A LP KAFTYL H PRFK TPL LCIAVAAAIPC L HA ww LG GD SEGI I H L VLA A -- 374
Cdd:TIGR00911 324 L VGL SCF G -- SV N GSLFSSS R LFFVGGRE G H LP SLLSMI H VKRL TPL PSLLIVCTLTL L ML -- FS GD IYSL I N L ISF A nw 399
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 489183910 375 VC awgta YL L VTLSVVL LR IR RP DLP R AYRS PLF p L P QL F SSAGIL L GMFYITP P gmn P ADIYLP F AL ML GLAAA Y ALF 453
Cdd:TIGR00911 400 LF ----- NA L AVAGLLW LR YK RP EMN R PIKV PLF - F P VF F LLSCLF L IILSLYS P --- P VGCGVG F II ML TGVPV Y FFG 469
AA_permease
pfam00324 Amino acid permease;
65-355
1.78e-06
Amino acid permease;
Pssm-ID: 366028 [Multi-domain]
Cd Length: 467
Bit Score: 50.40
E-value: 1.78e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489183910 65 TFA E AACLL P TR G SV Y D Y L S CG LG RFFAITGTLS a Y LIVHVFAGTA E tm L SGTMA L VN F ES L NTLTE pgg GA W LV G VGMV 144
Cdd:pfam00324 48 SLG E ISTNG P VS G GF Y T Y A S RF LG PSLGFATGWN - Y WLSWITVLAL E -- L TAASI L IQ F WE L VPDIP --- YL W VW G AVFL 121
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489183910 145 LCFGLL N AL G ITAF G R AE VILTFGMWSTLMI F AVA G LL ------ RLPAVELQGW ---- FGASMVGDDLPTLL S LVGM A M F 214
Cdd:pfam00324 122 VLLTII N LV G VKWY G E AE FWFALIKIIAIIG F IIV G II llsggn PNDGAIFRYL gdng GKNNFPPGFGKGFI S VFVI A F F 201
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489183910 215 M F V G C E F V TPL A P EV RHASRTL P R A MALGLV -------- GVACCMF L YG aamrrq VENLD L GGGLHLLET P MA I pr F AEQ 286
Cdd:pfam00324 202 A F T G I E L V GIA A G EV KNPEKSI P K A ILQVIW ritifyil SLLAIGL L VP ------ WNDPG L LNDSASAAS P FV I -- F FKF 273
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 489183910 287 VMGPFGRIWLGVGL L F A GAATI N TLMAGLP R I LY GM A L DG AL PK AFTY l HPRFKT PL LC I A V AAA I PC L 355
Cdd:pfam00324 274 LGISGLAPLINAVI L T A ALSAA N SSLYSGS R M LY SL A R DG LA PK FLKK - VDKRGV PL RA I L V SMV I SL L 341
frlA
PRK11357 amino acid permease;
62-358
6.39e-03
amino acid permease;
Pssm-ID: 183096 [Multi-domain]
Cd Length: 445
Bit Score: 39.07
E-value: 6.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489183910 62 Q STTF AE AACLL P TR G SV Y D YL SCGLG R FF A ITGTLSAY livhv F A GT A ETMLSGTM A L V NFESLN T LTE P GG G A w LVGV 141
Cdd:PRK11357 59 Q MCVY AE LSTAY P EN G AD Y V YL KNAGS R PL A FLSGWASF ----- W A ND A PSLSIMAL A I V SNLGFL T PID P LL G K - FIAA 132
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489183910 142 G MVLC F G LL NALGITAFGRAEVIL T FGMWSTLM I FAVA G LLRLP A velq GW F G A SMVGDDLP T ----- LL SLVGMAMFMF 216
Cdd:PRK11357 133 G LIIA F M LL HLRSVEGGAAFQTLI T IAKIIPFT I VIGL G IFWFK A ---- EN F A A PTTTAIGA T gsfma LL AGISATSWSY 208
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489183910 217 V G CEFVTPLAP E VRHASR T L PRA malg L V G VACCMFLYGAAMRRQVEN L DLGGG L HLL ETP MAIPRFAEQVM G PFGR I WL 296
Cdd:PRK11357 209 T G MASICYMTG E IKNPGK T M PRA ---- L I G SCLLVLVLYTLLALVISG L MPFDK L ANS ETP ISDALTWIPAL G STAG I FV 284
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 489183910 297 GVGLLFAGAATINTLMAGL PR IL Y G MA L D GALP K A F TYL HP RFK TP LLC I AVAA A IPCLHAW 358
Cdd:PRK11357 285 AITAMIVILGSLSSCVMYQ PR LE Y A MA K D NLFF K C F GHV HP KYN TP DVS I ILQG A LGIFFIF 346
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
