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Conserved domains on  [gi|489182099|ref|WP_003091551|]
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MULTISPECIES: DUF2061 domain-containing protein [Pseudomonas]

Protein Classification

DUF2061 domain-containing protein( domain architecture ID 10007052)

DUF2061 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
COG3205 COG3205
Uncharacterized membrane protein, DUF2061 family [Function unknown];
1-55 1.47e-23

Uncharacterized membrane protein, DUF2061 family [Function unknown];


:

Pssm-ID: 442438  Cd Length: 64  Bit Score: 83.75  E-value: 1.47e-23
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*
gi 489182099  1 MLKTLTFTVMHFIIAFSVAYALTGSIAVGGLVAAVEPLCNSVGFYFHEKIWKRFE 55
Cdd:COG3205   8 MAKTISWRVIHFSVTFLVAYLLTGSLALAGAIALVEPLVKTVAYYFHERLWNRIR 62
 
Name Accession Description Interval E-value
COG3205 COG3205
Uncharacterized membrane protein, DUF2061 family [Function unknown];
1-55 1.47e-23

Uncharacterized membrane protein, DUF2061 family [Function unknown];


Pssm-ID: 442438  Cd Length: 64  Bit Score: 83.75  E-value: 1.47e-23
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*
gi 489182099  1 MLKTLTFTVMHFIIAFSVAYALTGSIAVGGLVAAVEPLCNSVGFYFHEKIWKRFE 55
Cdd:COG3205   8 MAKTISWRVIHFSVTFLVAYLLTGSLALAGAIALVEPLVKTVAYYFHERLWNRIR 62
DUF2061 pfam09834
Predicted membrane protein (DUF2061); This domain, found in various prokaryotic proteins, has ...
 2-52 2.75e-18

Predicted membrane protein (DUF2061); This domain, found in various prokaryotic proteins, has no known function.


Pssm-ID: 430864  Cd Length: 51  Bit Score: 70.31  E-value: 2.75e-18
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|.
gi 489182099   2 LKTLTFTVMHFIIAFSVAYALTGSIAVGGLVAAVEPLCNSVGFYFHEKIWK 52
Cdd:pfam09834  1 VKTLSWRVLHTSVTFLVAYLLTGSLAIAGAIALIEPVVKTVLYYFHERAWN 51
 
Name Accession Description Interval E-value
COG3205 COG3205
Uncharacterized membrane protein, DUF2061 family [Function unknown];
1-55 1.47e-23

Uncharacterized membrane protein, DUF2061 family [Function unknown];


Pssm-ID: 442438  Cd Length: 64  Bit Score: 83.75  E-value: 1.47e-23
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*
gi 489182099  1 MLKTLTFTVMHFIIAFSVAYALTGSIAVGGLVAAVEPLCNSVGFYFHEKIWKRFE 55
Cdd:COG3205   8 MAKTISWRVIHFSVTFLVAYLLTGSLALAGAIALVEPLVKTVAYYFHERLWNRIR 62
DUF2061 pfam09834
Predicted membrane protein (DUF2061); This domain, found in various prokaryotic proteins, has ...
 2-52 2.75e-18

Predicted membrane protein (DUF2061); This domain, found in various prokaryotic proteins, has no known function.


Pssm-ID: 430864  Cd Length: 51  Bit Score: 70.31  E-value: 2.75e-18
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|.
gi 489182099   2 LKTLTFTVMHFIIAFSVAYALTGSIAVGGLVAAVEPLCNSVGFYFHEKIWK 52
Cdd:pfam09834  1 VKTLSWRVLHTSVTFLVAYLLTGSLAIAGAIALIEPVVKTVLYYFHERAWN 51
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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