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Conserved domains on  [gi|489180040|ref|WP_003089526|]
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MULTISPECIES: DUF1654 domain-containing protein [Pseudomonas]

Protein Classification

DUF1654 domain-containing protein( domain architecture ID 10545267)

DUF1654 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF1654 pfam07867
Protein of unknown function (DUF1654); This family consists of proteins from the ...
 12-78 1.51e-23

Protein of unknown function (DUF1654); This family consists of proteins from the Pseudomonadaceae.


:

Pssm-ID: 429703  Cd Length: 67  Bit Score: 84.42  E-value: 1.51e-23
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 489180040  12 TAYDLLNTRIQRIIHAPAAQQACQACISRLPGEDEGDWAHLLESFDRSNQWLLDPQRDGSIVLRWSS 78
Cdd:pfam07867  1 TSYELLGARIQRIINAPAAQKSRWAVVHRLPGESEDDWARLLEEIAETEGVTLAWQDDGSVRVRWTR 67
 
Name Accession Description Interval E-value
DUF1654 pfam07867
Protein of unknown function (DUF1654); This family consists of proteins from the ...
 12-78 1.51e-23

Protein of unknown function (DUF1654); This family consists of proteins from the Pseudomonadaceae.


Pssm-ID: 429703  Cd Length: 67  Bit Score: 84.42  E-value: 1.51e-23
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 489180040  12 TAYDLLNTRIQRIIHAPAAQQACQACISRLPGEDEGDWAHLLESFDRSNQWLLDPQRDGSIVLRWSS 78
Cdd:pfam07867  1 TSYELLGARIQRIINAPAAQKSRWAVVHRLPGESEDDWARLLEEIAETEGVTLAWQDDGSVRVRWTR 67
 
Name Accession Description Interval E-value
DUF1654 pfam07867
Protein of unknown function (DUF1654); This family consists of proteins from the ...
 12-78 1.51e-23

Protein of unknown function (DUF1654); This family consists of proteins from the Pseudomonadaceae.


Pssm-ID: 429703  Cd Length: 67  Bit Score: 84.42  E-value: 1.51e-23
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 489180040  12 TAYDLLNTRIQRIIHAPAAQQACQACISRLPGEDEGDWAHLLESFDRSNQWLLDPQRDGSIVLRWSS 78
Cdd:pfam07867  1 TSYELLGARIQRIINAPAAQKSRWAVVHRLPGESEDDWARLLEEIAETEGVTLAWQDDGSVRVRWTR 67
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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