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Conserved domains on  [gi|489179622|ref|WP_003089113|]
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MULTISPECIES: GDCCVxC domain-containing (seleno)protein [Bacteria]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
GDCCVxC NF041374
GDCCVxC domain;
8-65 2.83e-30

GDCCVxC domain;


:

Pssm-ID: 469265  Cd Length: 58  Bit Score: 100.72  E-value: 2.83e-30
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 489179622  8 SVLTCPRCGFAKPETMPTDACQFYYECSNCKALLRPNPGDCCVFCSFGSVKCPPIQQQ 65
Cdd:NF041374  1 STLTCPHCGHQKEETMPTDACQFFYECESCGALLKPKPGDCCVFCSYGSVPCPPIQQG 58
 
Name Accession Description Interval E-value
GDCCVxC NF041374
GDCCVxC domain;
8-65 2.83e-30

GDCCVxC domain;


Pssm-ID: 469265  Cd Length: 58  Bit Score: 100.72  E-value: 2.83e-30
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 489179622  8 SVLTCPRCGFAKPETMPTDACQFYYECSNCKALLRPNPGDCCVFCSFGSVKCPPIQQQ 65
Cdd:NF041374  1 STLTCPHCGHQKEETMPTDACQFFYECESCGALLKPKPGDCCVFCSYGSVPCPPIQQG 58
 
Name Accession Description Interval E-value
GDCCVxC NF041374
GDCCVxC domain;
8-65 2.83e-30

GDCCVxC domain;


Pssm-ID: 469265  Cd Length: 58  Bit Score: 100.72  E-value: 2.83e-30
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 489179622  8 SVLTCPRCGFAKPETMPTDACQFYYECSNCKALLRPNPGDCCVFCSFGSVKCPPIQQQ 65
Cdd:NF041374  1 STLTCPHCGHQKEETMPTDACQFFYECESCGALLKPKPGDCCVFCSYGSVPCPPIQQG 58
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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