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Conserved domains on  [gi|489176934|ref|WP_003086454|]
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MULTISPECIES: flagellar hook-basal body complex protein FliE [Pseudomonas]

Protein Classification

flagellar hook-basal body complex protein FliE( domain architecture ID 10011337)

flagellar hook-basal body complex protein FliE which serves as a structural assembly platform for the rod, and may also serve as a regulator of flagellum-specific secretion

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
fliE PRK00253
flagellar hook-basal body protein FliE; Reviewed
 1-109 2.34e-41

flagellar hook-basal body protein FliE; Reviewed


:

Pssm-ID: 178948  Cd Length: 108  Bit Score: 132.00  E-value: 2.34e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176934   1 MSQGVEFNRLMLEMRSMQMEAMAKAKPVQAPAeVGAPSFSEMLSQAVDKVNETQQASTAMANAFEVGQSGVDLTDVMIAS 80
Cdd:PRK00253   1 MMDIQGIEGVLSQLQATAMEASGQAKPAQGAA-VGTADFAGQLKAALDKVNDTQQAARTLAEKFELGDPGVSLNDVMIAL 79

                         90       100
                 ....*....|....*....|....*....
gi 489176934  81 QKASVSFQAMTQVRNKLVQAYQDIMQMPV 109
Cdd:PRK00253  80 QKASVSFQAGIQVRNKLVAAYQEIMNMQV 108
 
Name Accession Description Interval E-value
fliE PRK00253
flagellar hook-basal body protein FliE; Reviewed
 1-109 2.34e-41

flagellar hook-basal body protein FliE; Reviewed


Pssm-ID: 178948  Cd Length: 108  Bit Score: 132.00  E-value: 2.34e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176934   1 MSQGVEFNRLMLEMRSMQMEAMAKAKPVQAPAeVGAPSFSEMLSQAVDKVNETQQASTAMANAFEVGQSGVDLTDVMIAS 80
Cdd:PRK00253   1 MMDIQGIEGVLSQLQATAMEASGQAKPAQGAA-VGTADFAGQLKAALDKVNDTQQAARTLAEKFELGDPGVSLNDVMIAL 79

                         90       100
                 ....*....|....*....|....*....
gi 489176934  81 QKASVSFQAMTQVRNKLVQAYQDIMQMPV 109
Cdd:PRK00253  80 QKASVSFQAGIQVRNKLVAAYQEIMNMQV 108
FliE pfam02049
Flagellar hook-basal body complex protein FliE;
21-109 1.07e-27

Flagellar hook-basal body complex protein FliE;


Pssm-ID: 460429  Cd Length: 89  Bit Score: 96.87  E-value: 1.07e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176934   21 AMAKAKPVQAPAEVGAPSFSEMLSQAVDKVNETQQASTAMANAFEVGQSgVDLTDVMIASQKASVSFQAMTQVRNKLVQA 100
Cdd:pfam02049   2 AAAGASAASAAAAAGGGSFASVLKDALDEVNQTQQEAEALAEAFATGEP-VDLHDVMIAMQKASLSLQLTVQVRNKLVEA 80


                  ....*....
gi 489176934  101 YQDIMQMPV 109
Cdd:pfam02049  81 YQEIMRMQV 89
FliE COG1677
Flagellar hook-basal body complex protein FliE [Cell motility];
18-109 2.88e-25

Flagellar hook-basal body complex protein FliE [Cell motility];


Pssm-ID: 441283  Cd Length: 105  Bit Score: 91.18  E-value: 2.88e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176934  18 QMEAMAKAKPVQAPAEVGAPSFSEMLSQAVDKVNETQQASTAMANAFEVGQSgVDLTDVMIASQKASVSFQAMTQVRNKL 97
Cdd:COG1677   15 ALAAQAAPSAAAAAPAAGGASFGDVLKDALDDVNQTQQEAEALAQAFATGKS-VDLHDVMIAMQKASLSLQLTVQVRNKL 93

                         90
                 ....*....|..
gi 489176934  98 VQAYQDIMQMPV 109
Cdd:COG1677   94 VEAYQEIMRMQV 105
fliE TIGR00205
flagellar hook-basal body complex protein FliE; fliE is a component of the flagellar ...
 38-107 3.72e-19

flagellar hook-basal body complex protein FliE; fliE is a component of the flagellar hook-basal body complex located possibly at (MS-ring)-rod junction. [Cellular processes, Chemotaxis and motility]


Pssm-ID: 272960  Cd Length: 108  Bit Score: 75.74  E-value: 3.72e-19
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176934   38 SFSEMLSQAVDKVNETQQASTAMANAFEVGQSGVDLTDVMIASQKASVSFQAMTQVRNKLVQAYQDIMQM 107
Cdd:TIGR00205  38 SFSDLLKNSITDLNKTQLASDKVTEQAALGPSSVDLHDVMIAMQKASMSMSILKEVRNKAVKAYQEIMRM 107
 
Name Accession Description Interval E-value
fliE PRK00253
flagellar hook-basal body protein FliE; Reviewed
 1-109 2.34e-41

flagellar hook-basal body protein FliE; Reviewed


Pssm-ID: 178948  Cd Length: 108  Bit Score: 132.00  E-value: 2.34e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176934   1 MSQGVEFNRLMLEMRSMQMEAMAKAKPVQAPAeVGAPSFSEMLSQAVDKVNETQQASTAMANAFEVGQSGVDLTDVMIAS 80
Cdd:PRK00253   1 MMDIQGIEGVLSQLQATAMEASGQAKPAQGAA-VGTADFAGQLKAALDKVNDTQQAARTLAEKFELGDPGVSLNDVMIAL 79

                         90       100
                 ....*....|....*....|....*....
gi 489176934  81 QKASVSFQAMTQVRNKLVQAYQDIMQMPV 109
Cdd:PRK00253  80 QKASVSFQAGIQVRNKLVAAYQEIMNMQV 108
FliE pfam02049
Flagellar hook-basal body complex protein FliE;
21-109 1.07e-27

Flagellar hook-basal body complex protein FliE;


Pssm-ID: 460429  Cd Length: 89  Bit Score: 96.87  E-value: 1.07e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176934   21 AMAKAKPVQAPAEVGAPSFSEMLSQAVDKVNETQQASTAMANAFEVGQSgVDLTDVMIASQKASVSFQAMTQVRNKLVQA 100
Cdd:pfam02049   2 AAAGASAASAAAAAGGGSFASVLKDALDEVNQTQQEAEALAEAFATGEP-VDLHDVMIAMQKASLSLQLTVQVRNKLVEA 80


                  ....*....
gi 489176934  101 YQDIMQMPV 109
Cdd:pfam02049  81 YQEIMRMQV 89
FliE COG1677
Flagellar hook-basal body complex protein FliE [Cell motility];
18-109 2.88e-25

Flagellar hook-basal body complex protein FliE [Cell motility];


Pssm-ID: 441283  Cd Length: 105  Bit Score: 91.18  E-value: 2.88e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176934  18 QMEAMAKAKPVQAPAEVGAPSFSEMLSQAVDKVNETQQASTAMANAFEVGQSgVDLTDVMIASQKASVSFQAMTQVRNKL 97
Cdd:COG1677   15 ALAAQAAPSAAAAAPAAGGASFGDVLKDALDDVNQTQQEAEALAQAFATGKS-VDLHDVMIAMQKASLSLQLTVQVRNKL 93

                         90
                 ....*....|..
gi 489176934  98 VQAYQDIMQMPV 109
Cdd:COG1677   94 VEAYQEIMRMQV 105
fliE PRK12728
flagellar hook-basal body protein FliE; Provisional
 38-109 1.58e-19

flagellar hook-basal body protein FliE; Provisional


Pssm-ID: 237183  Cd Length: 102  Bit Score: 76.53  E-value: 1.58e-19
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 489176934  38 SFSEMLSQAVDKVNETQQASTAMANAFEVGQSgVDLTDVMIASQKASVSFQAMTQVRNKLVQAYQDIMQMPV 109
Cdd:PRK12728  32 SFSDFLKEALNKVNELQVEADNSTEKLVKGEI-VDLHDVMIAAQKASISLQLTVQIRNKVVEAYQEIMRMQL 102
fliE TIGR00205
flagellar hook-basal body complex protein FliE; fliE is a component of the flagellar ...
 38-107 3.72e-19

flagellar hook-basal body complex protein FliE; fliE is a component of the flagellar hook-basal body complex located possibly at (MS-ring)-rod junction. [Cellular processes, Chemotaxis and motility]


Pssm-ID: 272960  Cd Length: 108  Bit Score: 75.74  E-value: 3.72e-19
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176934   38 SFSEMLSQAVDKVNETQQASTAMANAFEVGQSGVDLTDVMIASQKASVSFQAMTQVRNKLVQAYQDIMQM 107
Cdd:TIGR00205  38 SFSDLLKNSITDLNKTQLASDKVTEQAALGPSSVDLHDVMIAMQKASMSMSILKEVRNKAVKAYQEIMRM 107
fliE PRK00732
flagellar hook-basal body complex protein FliE;
21-109 1.59e-08

flagellar hook-basal body complex protein FliE;


Pssm-ID: 179101  Cd Length: 102  Bit Score: 48.21  E-value: 1.59e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176934  21 AMAKAKPVQAPAEVGAPSFSEMLSQAVDKVNETQQASTAMANAFEVGQSgvDLTDVMIASQKASVSFQAMTQVRNKLVQA 100
Cdd:PRK00732  16 RMAVPSGGGGGGDKGGPSFGALLKDAMGSVLEAGRKSDAQTAAMASGKA--NLMDVVTAVAETDVAVSTLVSVRDRVIQA 93


                 ....*....
gi 489176934 101 YQDIMQMPV 109
Cdd:PRK00732  94 YEEIMRMPI 102
fliE PRK12729
flagellar hook-basal body protein FliE; Provisional
 24-107 6.84e-08

flagellar hook-basal body protein FliE; Provisional


Pssm-ID: 183707  Cd Length: 127  Bit Score: 46.95  E-value: 6.84e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176934  24 KAKPVQAPAEVgAPSFSEMLSQAVDKVNETQQASTAMANAFEVGQSGVDLTDVMIASQKASVSFQAMTQVRNKLVQAYQD 103
Cdd:PRK12729  44 DVKQPVSPDYV-AESFSEAMKNALTSVNDLQVEADELTQKMVFDPNSVDAHDVMIASEKARVALTFTKTIADGVVRAYRE 122


                 ....
gi 489176934 104 IMQM 107
Cdd:PRK12729 123 LTSL 126
fliE PRK03907
flagellar hook-basal body complex protein FliE;
38-104 1.58e-07

flagellar hook-basal body complex protein FliE;


Pssm-ID: 235173  Cd Length: 97  Bit Score: 45.61  E-value: 1.58e-07
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 489176934  38 SFSEMLSQAVDKVNETQQASTAMANAFEVGQSGvDLTDVMIASQKASVSFQAMTQVRNKLVQAYQDI 104
Cdd:PRK03907  27 EFSKLLKQSINELNKTQEQSEKALADIATGQVK-DLHQAAIAIGKAETSMKLMLEVRNKAISAYKEI 92
fliE PRK01482
flagellar hook-basal body complex protein FliE;
5-104 5.64e-06

flagellar hook-basal body complex protein FliE;


Pssm-ID: 134562  Cd Length: 108  Bit Score: 41.72  E-value: 5.64e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176934   5 VEFNRLMLEMRSMQMEAMAKakpvqapaEVGAPSFSEMLSQAVDKVNETQQASTAMANAFEVGQSGVDLTDVMIASQKAS 84
Cdd:PRK01482  13 VKKNPLHFDVNNFSSFDVAK--------NKKAKTFKDTLLNAIDDVNNSQLNVSKVTEQAILDPESVDVHDVTIAMAKAN 84

                         90       100
                 ....*....|....*....|
gi 489176934  85 VSFQAMTQVRNKLVQAYQDI 104
Cdd:PRK01482  85 MNLSIAKAVVERSIKAYQDI 104
fliE PRK00790
flagellar hook-basal body complex protein FliE;
27-109 1.47e-04

flagellar hook-basal body complex protein FliE;


Pssm-ID: 179126  Cd Length: 109  Bit Score: 38.10  E-value: 1.47e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176934  27 PVQAPAEVGAPSFSEMLSQAVDKVNETQQASTAMAnaFEVGQSGVDLTDVMIASQKASVSFQAMTQVRNKLVQAYQDIMQ 106
Cdd:PRK00790  29 APAAAPAAPGASFASVLGQMAGDAVQTLKAAEATS--IQAIKGKADTREVVDAVMQAEQALQTAVAIRDKVVEAYLEILR 106


                 ...
gi 489176934 107 MPV 109
Cdd:PRK00790 107 MPI 109
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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