|
Name |
Accession |
Description |
Interval |
E-value |
| flgK |
PRK05683 |
flagellar hook-associated protein FlgK; Validated |
2-681 |
0e+00 |
|
flagellar hook-associated protein FlgK; Validated
Pssm-ID: 235558 [Multi-domain] Cd Length: 676 Bit Score: 908.72 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 2 SDLLSIGLSGLGTSQTWLTITGHNITNVKTPGYSRQDAIQQTQVPQFSGAGYMGSGSQIVDVRRLASDFLTGQLRNATSQ 81
Cdd:PRK05683 1 MSLISIGLSGLGASQTALAVTGNNIANVDTAGYSRQQTVQTTKASQQSGAGYIGTGTTLADVRRIYNSFLDTQLRTATSL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 82 NSELSAFRSQIEQLDGLLSNTTTGVSPAMQRFFAALQAAANNPSSTEAREAVLAQAEGLGKTFNTLYDQLDKQNSLINQQ 161
Cdd:PRK05683 81 NSDASAYLGQISQLDKLLSDSTTGISPALQRFFTALQTAAANPTDTAARQLLLTQAQGLSKRFNSLSSQLNQQNSNINSQ 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 162 LGALASQVNHLSQSVASYNDAIAKAKSAGAVPNDLMDARDEAVRKLSEMIGVTAVTQDDNsVSLFIGSGQPLVVGNTVST 241
Cdd:PRK05683 161 LSAMTDQVNNLTTSIASYNKQIAQASASGATPNDLLDARDEAVRQLNELVGVTVVERDGN-YDVYIGSGQPLVVGNTANT 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 242 LSVVPGLDDPTRYQVQLSNGNSIQNVTGLVSGGEMGGLLAYRNSALDSSYNKLGQLAITLADTINKQLGQGLDLAGKAGA 321
Cdd:PRK05683 240 LSVVPGPSDPSRYNVQLNRGSSTQDVTSVVSGGEIGGLLRYRSDVLDPAMNELGRLALVVADQINSQLGQGIDLNGNFGS 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 322 NLFGDINDPDITALRVLAKNGNT-GNVHANLNITDTSKLNSSDFRLDFDG-TNFTARRLGDDASMqvtvsgtGPYTLSFK 399
Cdd:PRK05683 320 SLFGDINSADAISQRSLAKNGNSaGSGNLNVTIKDTSKLTTSDYEVTFTSaTNYTVRRLSDGTDM-------GSFDLSDN 392
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 400 DANGIDqGFNLTLD-QLPAAGDRFTLQPTRRGAADIEATLKNASQLAFAGTARTESTTENRGTGKIGAPTLTS---GPSP 475
Cdd:PRK05683 393 PAPVID-GFSLSLNgGTLAAGDSFKVTPTRNAASDIETVLTDPKKLAFAAPLTAEAGSGNSGTGSITQPTLTSkldIYDP 471
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 476 VDPAVLQGAFgPNGISLGATLSADgktytlsSPLPAGWSYVDKDGNALtGSPTLTSGNTNTVRMAFTDPS-------GQK 548
Cdd:PRK05683 472 AQTADLQNAI-KNSTPVKLVFGAD-------SSGPQSYTLVDAKGNAI-GSGTIVPGQSNTLTLAVPMPDasgnpinDAT 542
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 549 YSYEFELSGVPQNSDSFKLGFNDKGISDNRNALNLLALQTKPTVGGTDNT-GSTYNEAYGGLVERVGTLTAQVRASSEAS 627
Cdd:PRK05683 543 FTFEMTISGSPQAGDSFTVSFNGAGSSDNRNALALLGLQTKSTVGVGSGGkGTSLTDAYGKLVERVGTLASQARADATAT 622
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....
gi 489176891 628 ATVLKQAQDSRDSLSGVSLDEEAANLIQFQQYYGASAQVIQVARTLFDTLIGAF 681
Cdd:PRK05683 623 AAVLKQAKDSRDSLSGVSLDEEAANLIKFQQYYTASSQIIKAAQETFSTLINAL 676
|
|
| FlgK |
COG1256 |
Flagellar hook-associated protein FlgK [Cell motility]; |
1-682 |
1.05e-118 |
|
Flagellar hook-associated protein FlgK [Cell motility];
Pssm-ID: 440868 [Multi-domain] Cd Length: 479 Bit Score: 363.43 E-value: 1.05e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 1 MSDLLSIGLSGLGTSQTWLTITGHNITNVKTPGYSRQDAIQQTQVPQFSGAGYMGSGSQIVDVRRLASDFLTGQLRNATS 80
Cdd:COG1256 2 LFSALNIALSGLNAAQRALDVTSHNIANANTPGYSRQRVVLSAAGPTATGAGQVGTGVRVTGIRRIRDEFLDAQLRSANS 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 81 QNSELSAFRSQIEQLDGLLSNT-TTGVSPAMQRFFAALQAAANNPSSTEAREAVLAQAEGLGKTFNTLYDQLDKQNSLIN 159
Cdd:COG1256 82 DLGYAEARADALSQLEALLGEPsDTGLSTALDDFFNALQELASNPESSAARQAVLEAAQALADRFNSLSSQLQDLRADAD 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 160 QQLGALASQVNHLSQSVASYNDAIAKAKSAGAVPNDLMDARDEAVRKLSEMIGVTAVTQDDNSVSLFIGSGQPLVVGNTV 239
Cdd:COG1256 162 SQIASTVDEINSLLSQIADLNKQIVKAEAGGQDANDLLDQRDQLLDELSELVGVTVVEQDDGTVNVSTGNGQTLVDGDTA 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 240 STLSVVPGLDDPTR-YQVQLSNGNSIQNVTGLVSGGEMGGLLAYRNSALDSSYNKLGQLAITLADTINKQLGQGLDLAGK 318
Cdd:COG1256 242 SELSFTPSAGDPGGlSTVTLDDSGVPSDATSSITGGSLGGLLELRDETLPEYQAQLDELARGLADAFNAVHAQGYDLNGN 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 319 AGANLFGDinDPDITALRVLAkngntgnvhanlnitdtsklnssdfrldfdgtnftarrlgddasmqvtvsgtgpytlsf 398
Cdd:COG1256 322 PGGDLFDI--DPSITGGTLTP----------------------------------------------------------- 340
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 399 kdangidqgfnltldqlpaagdrftlqPTRRGAADIE---ATLKNASQLAFAGTARTESttenrgtgkigaptltsgpsp 475
Cdd:COG1256 341 ---------------------------FDTVGAGNISvnpAVIGDPSLLAAANSDGGGA--------------------- 372
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 476 vdpavlqgafgpngislgatlsadgktytlssplpagwsyvdkdgnaltgsptltsgntntvrmaftdpsgqkysyefel 555
Cdd:COG1256 --------------------------------------------------------------------------------
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 556 sgvpqnsdsfklgfndkgiSDNRNALNLLALQTKPTVGGTDNTGsTYNEAYGGLVERVGTLTAQVRASSEASATVLKQAQ 635
Cdd:COG1256 373 -------------------GDNTNALALAALQDAKLVFDSGGSG-TLSDYYASLVSDLGVDAQQAKTEAEAQEALLDQLE 432
|
650 660 670 680
....*....|....*....|....*....|....*....|....*..
gi 489176891 636 DSRDSLSGVSLDEEAANLIQFQQYYGASAQVIQVARTLFDTLIGAFR 682
Cdd:COG1256 433 NQRQSVSGVNLDEEMANLIKFQQAYQANARVITTADEMLDTLLNIVG 479
|
|
| flgK_ends |
TIGR02492 |
flagellar hook-associated protein FlgK; The flagellar hook-associated protein FlgK of ... |
3-319 |
3.50e-73 |
|
flagellar hook-associated protein FlgK; The flagellar hook-associated protein FlgK of bacterial flagella has conserved N- and C-terminal domains. The central region is highly variable in length and sequence, and often contains substantial runs of low-complexity sequence. This model is built from an alignment of FlgK sequences with the central region excised. Note that several other proteins of the flagellar apparatus also are homologous in the N- and C-terminal regions to FlgK, but are excluded from this model. [Cellular processes, Chemotaxis and motility]
Pssm-ID: 274162 [Multi-domain] Cd Length: 323 Bit Score: 239.17 E-value: 3.50e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 3 DLLSIGLSGLGTSQTWLTITGHNITNVKTPGYSRQDAIQQTQVPQFSGAGYMGSGSQIVDVRRLASDFLTGQLRNATSQN 82
Cdd:TIGR02492 1 SLLNIAKSGLSASQIALSVTSNNIANANTPGYSRQRAVLTAVPAGGQGGKQIGTGVKVTSIRRIQDQFLDNQYRRANSSA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 83 SELSAFRSQIEQLDGLLSNTTT-GVSPAMQRFFAALQAAANNPSSTEAREAVLAQAEGLGKTFNTLYDQLDKQNSLINQQ 161
Cdd:TIGR02492 81 GYADSRASGLSKIEQIFNDLDGsGLGTYLNNFFNALQELAKNPDSEALRQAVLESAQALANSFNQTSNELQDLRKGINAE 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 162 LGALASQVNHLSQSVASYNDAIAKAKSAGAVPNDLMDARDEAVRKLSEMIGVTAVTQDDNSVSLFIGSGQPLVVGNTVST 241
Cdd:TIGR02492 161 IKSAVTEINSLLKQIASLNKEIKQVEASGQDANDLLDQRDLLLKELSQLIGISVSENENGTVNVYTGSGQVLVDGATVTG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 242 LSVVPGLDDPTR-----YQVQLSNGNSIQNVTGLVSGGEMGGLLAYRNSALDSSYNKLGQLAITLADTINKQLGQGLDLA 316
Cdd:TIGR02492 241 SSTSPLTADTTGgkvggDGVYLPSGSSKVTISSDLQGGKLGGLLDLRDGVLPDLQSQLDQLAKTLADEFNEVHQSGADLT 320
|
...
gi 489176891 317 GKA 319
Cdd:TIGR02492 321 GSA 323
|
|
| Flg_bbr_C |
pfam06429 |
Flagellar basal body rod FlgEFG protein C-terminal; This family consists of a number of ... |
642-678 |
3.97e-05 |
|
Flagellar basal body rod FlgEFG protein C-terminal; This family consists of a number of C-terminal domains of unknown function. This domain seems to be specific to flagellar basal-body rod and flagellar hook proteins in which pfam00460 is often present at the extreme N terminus.
Pssm-ID: 428939 [Multi-domain] Cd Length: 74 Bit Score: 42.25 E-value: 3.97e-05
10 20 30
....*....|....*....|....*....|....*..
gi 489176891 642 SGVSLDEEAANLIQFQQYYGASAQVIQVARTLFDTLI 678
Cdd:pfam06429 36 SNVNPVEEMVNMIEAQRAYEANSKVIQTADEMLQTAN 72
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| flgK |
PRK05683 |
flagellar hook-associated protein FlgK; Validated |
2-681 |
0e+00 |
|
flagellar hook-associated protein FlgK; Validated
Pssm-ID: 235558 [Multi-domain] Cd Length: 676 Bit Score: 908.72 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 2 SDLLSIGLSGLGTSQTWLTITGHNITNVKTPGYSRQDAIQQTQVPQFSGAGYMGSGSQIVDVRRLASDFLTGQLRNATSQ 81
Cdd:PRK05683 1 MSLISIGLSGLGASQTALAVTGNNIANVDTAGYSRQQTVQTTKASQQSGAGYIGTGTTLADVRRIYNSFLDTQLRTATSL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 82 NSELSAFRSQIEQLDGLLSNTTTGVSPAMQRFFAALQAAANNPSSTEAREAVLAQAEGLGKTFNTLYDQLDKQNSLINQQ 161
Cdd:PRK05683 81 NSDASAYLGQISQLDKLLSDSTTGISPALQRFFTALQTAAANPTDTAARQLLLTQAQGLSKRFNSLSSQLNQQNSNINSQ 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 162 LGALASQVNHLSQSVASYNDAIAKAKSAGAVPNDLMDARDEAVRKLSEMIGVTAVTQDDNsVSLFIGSGQPLVVGNTVST 241
Cdd:PRK05683 161 LSAMTDQVNNLTTSIASYNKQIAQASASGATPNDLLDARDEAVRQLNELVGVTVVERDGN-YDVYIGSGQPLVVGNTANT 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 242 LSVVPGLDDPTRYQVQLSNGNSIQNVTGLVSGGEMGGLLAYRNSALDSSYNKLGQLAITLADTINKQLGQGLDLAGKAGA 321
Cdd:PRK05683 240 LSVVPGPSDPSRYNVQLNRGSSTQDVTSVVSGGEIGGLLRYRSDVLDPAMNELGRLALVVADQINSQLGQGIDLNGNFGS 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 322 NLFGDINDPDITALRVLAKNGNT-GNVHANLNITDTSKLNSSDFRLDFDG-TNFTARRLGDDASMqvtvsgtGPYTLSFK 399
Cdd:PRK05683 320 SLFGDINSADAISQRSLAKNGNSaGSGNLNVTIKDTSKLTTSDYEVTFTSaTNYTVRRLSDGTDM-------GSFDLSDN 392
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 400 DANGIDqGFNLTLD-QLPAAGDRFTLQPTRRGAADIEATLKNASQLAFAGTARTESTTENRGTGKIGAPTLTS---GPSP 475
Cdd:PRK05683 393 PAPVID-GFSLSLNgGTLAAGDSFKVTPTRNAASDIETVLTDPKKLAFAAPLTAEAGSGNSGTGSITQPTLTSkldIYDP 471
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 476 VDPAVLQGAFgPNGISLGATLSADgktytlsSPLPAGWSYVDKDGNALtGSPTLTSGNTNTVRMAFTDPS-------GQK 548
Cdd:PRK05683 472 AQTADLQNAI-KNSTPVKLVFGAD-------SSGPQSYTLVDAKGNAI-GSGTIVPGQSNTLTLAVPMPDasgnpinDAT 542
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 549 YSYEFELSGVPQNSDSFKLGFNDKGISDNRNALNLLALQTKPTVGGTDNT-GSTYNEAYGGLVERVGTLTAQVRASSEAS 627
Cdd:PRK05683 543 FTFEMTISGSPQAGDSFTVSFNGAGSSDNRNALALLGLQTKSTVGVGSGGkGTSLTDAYGKLVERVGTLASQARADATAT 622
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....
gi 489176891 628 ATVLKQAQDSRDSLSGVSLDEEAANLIQFQQYYGASAQVIQVARTLFDTLIGAF 681
Cdd:PRK05683 623 AAVLKQAKDSRDSLSGVSLDEEAANLIKFQQYYTASSQIIKAAQETFSTLINAL 676
|
|
| flgK |
PRK06945 |
flagellar hook-associated protein FlgK; Validated |
1-681 |
1.28e-174 |
|
flagellar hook-associated protein FlgK; Validated
Pssm-ID: 235895 [Multi-domain] Cd Length: 651 Bit Score: 513.02 E-value: 1.28e-174
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 1 MSDLLSIGLSGLGTSQTWLTITGHNITNVKTPGYSRQDAIQQTQVPQFSGAGYMGSGSQIVDVRRLASDFLTGQLRNATS 80
Cdd:PRK06945 1 SSSLLNIGLSGLNAAQWGLTTTGHNISNAATPGYSRQRVVQAEAGGQYTGSGYLGQGVNVVTVKRQYSQYLSAQLNNAQA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 81 QNSELSAFRSQIEQLDGLLSNTTTGVSPAMQRFFAALQAAANNPSSTEAREAVLAQAEGLGKTFNTLYDQLDKQNSLINQ 160
Cdd:PRK06945 81 ASSSLSTYYSQISQLNNYLADPTAGLSPAITSFFTGLQNVANNPSDPSARQTMLSNAQTLASQFNAAGQQLDQLRQSVNT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 161 QLGALASQVNHLSQSVASYNDAIAKAKSA-GAVPNDLMDARDEAVRKLSEMIGVTAVTQDDNSVSLFIGSGQPLVVGNTV 239
Cdd:PRK06945 161 QLTSSVTQINSYTKQIAQLNDQIAKAESSqGQPPNDLLDQRDQLVSELSKLVGVTVVQQDDGGYNVFVGNGQPLVVGNQS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 240 STLSVVPGLDDPTRYQVQ--LSNGNSIQNVTGLVSGGEMGGLLAYRNSALDSSYNKLGQLAITLADTINKQLGQGLDLAG 317
Cdd:PRK06945 241 YQLTTVPSPSDPSRLTVAgyKPPGTTQELPDSSLTGGTLGGLLAFRSQTLDPAQNQLGRLAASLAAQFNAQNALGIDLNG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 318 KAGANLFgdindpDITALRVLAKNGNTGNVHANLNITDTSKLNSSDFRLDFDGTNFTARRLGDDASMQVTVSGTGPYTLS 397
Cdd:PRK06945 321 NLGGDLF------SVAGPTVYANANNTGSATLTASITNASALTTSDYTLSYDGTNYTLTRLSDGSVVGTATSLPTPPPTT 394
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 398 FkdangidQGFNLTLDQLPAAGDRFTLQPTRRGAADIEATLKNASQLAFAGTARTESTTENRGTGKIGAPTLTSGPSPVD 477
Cdd:PRK06945 395 I-------DGLSLSLSGTMNAGDSFLVQPTRNAANGFSVATTDGSAIAAASPVRASAGSTNTGTGAISQGSVSSGYPLPS 467
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 478 PAVlqgafgpngislgaTLSADGKTYTLSSPlPAGwsyvdKDGNALTGSPTLTSGNTNTVRMAFTDPSGQKYSY---EFE 554
Cdd:PRK06945 468 GTT--------------TLTYDAATGTLSGF-PAG-----TTVTVAGTPPTSVTITPATTPVPYTSGAGISLVFngvSVT 527
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 555 LSGVPQNSDSFKLGFNDKGISDNRNALNLLALQTKPTVggtDNTGSTYNEAYGGLVERVGTLTAQVRASSEASATVLKQA 634
Cdd:PRK06945 528 LSGTPADGDTFTIGPNTGGTNDGRNALALAKLQNAKTL---DGGTATYTGAYAQLVNQVGNKASQLKVSSAAQTALLGQI 604
|
650 660 670 680
....*....|....*....|....*....|....*....|....*..
gi 489176891 635 QDSRDSLSGVSLDEEAANLIQFQQYYGASAQVIQVARTLFDTLIGAF 681
Cdd:PRK06945 605 TAAQQSVSGVNLDEEAANLLRYQQAYQANAKVIQTASTLFDTLLGIF 651
|
|
| flgK |
PRK08147 |
flagellar hook-associated protein FlgK; Validated |
1-680 |
1.80e-128 |
|
flagellar hook-associated protein FlgK; Validated
Pssm-ID: 236165 [Multi-domain] Cd Length: 547 Bit Score: 390.96 E-value: 1.80e-128
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 1 MSDLLSIGLSGLGTSQTWLTITGHNITNVKTPGYSRQDAIQQTQVPQFSGAGYMGSGSQIVDVRRLASDFLTGQLRNATS 80
Cdd:PRK08147 1 MSSLINTAMSGLNAAQAALNTVSNNISNYNVAGYTRQTTILAQAGSTLTAGGWIGNGVYVSGVQREYDAFITNQLRAAQT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 81 QNSELSAFRSQIEQLDGLLSNTTTGVSPAMQRFFAALQAAANNPSSTEAREAVLAQAEGLGKTFNTLYDQLDKQNSLINQ 160
Cdd:PRK08147 81 QSSGLTTRYEQMSKIDNLLSDSTNSLSTTMQDFFTSLQTLVSNAEDPAARQALIGKAEGLVNQFKTTDQYLRDQDKGVNT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 161 QLGALASQVNHLSQSVASYNDAIAKA--KSAGAVPNDLMDARDEAVRKLSEMIGVTAVTQDDNSVSLFIGSGQPLVVGNT 238
Cdd:PRK08147 161 AIGSSVDQINNYAKQIASLNDQITRLtgVGAGASPNDLLDQRDQLVSELNQIVGVEVSVQDGGTYNITMANGYSLVQGST 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 239 VSTLSVVPGLDDPTRYQVQLSNGNSiQNVT---GLVSGGEMGGLLAYRNSALDSSYNKLGQLAITLADTINKQLGQGLDL 315
Cdd:PRK08147 241 AYQLAAVPSSADPTRTTVAYVDGTA-GNIEipeKLLTTGSLGGLLTFRSQDLDQTRNQLGQLALAFADAFNTQHKAGFDA 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 316 AGKAGANLFGdINDPDitalrVLAKNGNTGNVHANLNITDTSKLNSSDFRLDFDGTNFTARRLGDDASMQVTVSGTGPyT 395
Cdd:PRK08147 320 NGDAGEDFFS-IGKPA-----VLSNSKNTGTASLTAEYTDASAVKATDYKISFDGTNWQVTRLSDNTTFTVTPDANGK-T 392
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 396 LSFkdangidQGFNLTLDQLPAAGDRFTLQPTRRGAADIEATLKNASQLAFAGTArtesttenrgtgkigaptltsgpsp 475
Cdd:PRK08147 393 LEF-------DGLKVTVTGTPAANDSFTLKPVSDAIVNMDVLITDESKIAMASEA------------------------- 440
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 476 vdpavlqgafgpngislgatlsadgktytlssplpagwsyvdkdgnaltgsptltsgntntvrmaftdpsgqkysyefel 555
Cdd:PRK08147 --------------------------------------------------------------------------------
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 556 sgvpqnsdsfklgfnDKGISDNRNALNLLALQTKPTVGGTdntgSTYNEAYGGLVERVGTLTAQVRASSEASATVLKQAQ 635
Cdd:PRK08147 441 ---------------DGGDSDNRNGQALLDLQNKKLVGGK----KSFNDAYASLVSDVGNQTATLKTSSTTQANVVTQLT 501
|
650 660 670 680
....*....|....*....|....*....|....*....|....*
gi 489176891 636 DSRDSLSGVSLDEEAANLIQFQQYYGASAQVIQVARTLFDTLIGA 680
Cdd:PRK08147 502 NQQQSVSGVNLDEEYGNLQRFQQYYLANAQVLQTASTLFDALLNI 546
|
|
| FlgK |
COG1256 |
Flagellar hook-associated protein FlgK [Cell motility]; |
1-682 |
1.05e-118 |
|
Flagellar hook-associated protein FlgK [Cell motility];
Pssm-ID: 440868 [Multi-domain] Cd Length: 479 Bit Score: 363.43 E-value: 1.05e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 1 MSDLLSIGLSGLGTSQTWLTITGHNITNVKTPGYSRQDAIQQTQVPQFSGAGYMGSGSQIVDVRRLASDFLTGQLRNATS 80
Cdd:COG1256 2 LFSALNIALSGLNAAQRALDVTSHNIANANTPGYSRQRVVLSAAGPTATGAGQVGTGVRVTGIRRIRDEFLDAQLRSANS 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 81 QNSELSAFRSQIEQLDGLLSNT-TTGVSPAMQRFFAALQAAANNPSSTEAREAVLAQAEGLGKTFNTLYDQLDKQNSLIN 159
Cdd:COG1256 82 DLGYAEARADALSQLEALLGEPsDTGLSTALDDFFNALQELASNPESSAARQAVLEAAQALADRFNSLSSQLQDLRADAD 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 160 QQLGALASQVNHLSQSVASYNDAIAKAKSAGAVPNDLMDARDEAVRKLSEMIGVTAVTQDDNSVSLFIGSGQPLVVGNTV 239
Cdd:COG1256 162 SQIASTVDEINSLLSQIADLNKQIVKAEAGGQDANDLLDQRDQLLDELSELVGVTVVEQDDGTVNVSTGNGQTLVDGDTA 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 240 STLSVVPGLDDPTR-YQVQLSNGNSIQNVTGLVSGGEMGGLLAYRNSALDSSYNKLGQLAITLADTINKQLGQGLDLAGK 318
Cdd:COG1256 242 SELSFTPSAGDPGGlSTVTLDDSGVPSDATSSITGGSLGGLLELRDETLPEYQAQLDELARGLADAFNAVHAQGYDLNGN 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 319 AGANLFGDinDPDITALRVLAkngntgnvhanlnitdtsklnssdfrldfdgtnftarrlgddasmqvtvsgtgpytlsf 398
Cdd:COG1256 322 PGGDLFDI--DPSITGGTLTP----------------------------------------------------------- 340
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 399 kdangidqgfnltldqlpaagdrftlqPTRRGAADIE---ATLKNASQLAFAGTARTESttenrgtgkigaptltsgpsp 475
Cdd:COG1256 341 ---------------------------FDTVGAGNISvnpAVIGDPSLLAAANSDGGGA--------------------- 372
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 476 vdpavlqgafgpngislgatlsadgktytlssplpagwsyvdkdgnaltgsptltsgntntvrmaftdpsgqkysyefel 555
Cdd:COG1256 --------------------------------------------------------------------------------
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 556 sgvpqnsdsfklgfndkgiSDNRNALNLLALQTKPTVGGTDNTGsTYNEAYGGLVERVGTLTAQVRASSEASATVLKQAQ 635
Cdd:COG1256 373 -------------------GDNTNALALAALQDAKLVFDSGGSG-TLSDYYASLVSDLGVDAQQAKTEAEAQEALLDQLE 432
|
650 660 670 680
....*....|....*....|....*....|....*....|....*..
gi 489176891 636 DSRDSLSGVSLDEEAANLIQFQQYYGASAQVIQVARTLFDTLIGAFR 682
Cdd:COG1256 433 NQRQSVSGVNLDEEMANLIKFQQAYQANARVITTADEMLDTLLNIVG 479
|
|
| flgK |
PRK12714 |
flagellar hook-associated protein FlgK; Provisional |
2-682 |
2.96e-97 |
|
flagellar hook-associated protein FlgK; Provisional
Pssm-ID: 183697 [Multi-domain] Cd Length: 624 Bit Score: 312.27 E-value: 2.96e-97
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 2 SDLLSIGLSGLGTSQTWLTITGHNITNVKTPGYSRQDAIQQTQVPQFSGAGYMGSGSQIVDVRRLASDFLTGQLRNATSQ 81
Cdd:PRK12714 1 MSIMSTGTSALIAFQRALSTVSHNVANINTEGYSRQRVEFATRTPTDMGYAFVGNGAKITDVGRVADQLAISRLLDSGGE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 82 NSELSAFRSQIEQLDGLLSNTTTGVSPAMQRFFAALQAAANNPSSTEAREAVLAQAEGLGKTFNTLYDQLDKQNSLINQQ 161
Cdd:PRK12714 81 LSRLQQLSSLSNRVDALYSNTATNVAGLWSNFFDSTSALSSNASSTAERQSMLDSGNSLATRFKQLNGQMDSLSNEVNSG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 162 LGALASQVNHLSQSVASYNDAIAkAKSAGAVPnDLMDARDEAVRKLSEMIGVTAVTQDDNSVSLFIGSGQPLVVGNTVST 241
Cdd:PRK12714 161 LTSSVDEVNRLTQQIAKINGTIG-SSAQNAAP-DLLDQRDALVSKLVGYTGGTAVIQDGGFMNVFTAGGQALVVGTTASK 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 242 LSVVPGLDDPTRYQVQLSNGNSIQNVTGLVSGGEMGGLLAYRNSALDSSYNKLGQLAITLADTINKQLGQGLDLAGKAGA 321
Cdd:PRK12714 239 LTTVADPYQPTKLQVAMQTQGQNVSLSPSSLGGQIGGLLEFRSSVLEPTQAELGRLAVGMASSFNAGHSQGMDLYGAMGG 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 322 NLFgdindpDITALRVLAKNGNTGNVHANLNITDTSKLNSSDFRLDFDGTNFTARRLGDDASMQVTVSGTGPYTLsfkda 401
Cdd:PRK12714 319 NFF------NIGSPTVAANPSNTGTASLSASFSNLSAVDGQNVTLSFDGTNWKATRADTGSAVPMTGTGTAADPL----- 387
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 402 ngIDQGFNLTLDQLPAAGDRFTLQPTRRGAADIEATLKNASQLAFAGTARTESTTENRGTGKIGAPTLTSgpspvdpavl 481
Cdd:PRK12714 388 --VLNGVSMVVGGTPASGDKFLLQPTAGLAGSLSVAITDPSRIAAATPVKATATLANQGTGKISDVKVTN---------- 455
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 482 qgAFGPNGISLGATLSADGKTYTLssplpagwsyvdkDGnalTGSPTLTSGNTNTVRmaftdpsgqkySYEFELSGVPQN 561
Cdd:PRK12714 456 --AQNPALLTPSSIEFIDANQYTI-------------DG---AGPFAYTAGQTISAN-----------GWSFALDGAPKA 506
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 562 SDSFKLGFNDKGISDNRNALNLLALQ-TKPTVGGTdntgSTYNEAYGGLVERVGTLTAQVRASSEASATVLKQAQDSRDS 640
Cdd:PRK12714 507 GDTFGVGPTGAGSSDNGNAKLLAKVDdAKALNGGT----VTLNGALSGLTTSVGSAARAANYSADAQKVINDQAQASRDS 582
|
650 660 670 680
....*....|....*....|....*....|....*....|..
gi 489176891 641 LSGVSLDEEAANLIQFQQYYGASAQVIQVARTLFDTLIGAFR 682
Cdd:PRK12714 583 ISGVNLDEEAANMLKLQQAYQAAAQMISTADTMFQAILGAVR 624
|
|
| flgK |
PRK08871 |
flagellar hook-associated protein FlgK; Validated |
2-678 |
9.10e-84 |
|
flagellar hook-associated protein FlgK; Validated
Pssm-ID: 181572 [Multi-domain] Cd Length: 626 Bit Score: 276.73 E-value: 9.10e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 2 SDLLSIGLSGLGTSQTWLTITGHNITNVKTPGYSRQDAIQQTQVP-QFSGAGYmGSGSQIVDVRRLASDFLTGQLRNATS 80
Cdd:PRK08871 3 SDLLNVGTQSVLTAQRQLNTTGHNISNVNTEGYSRQSVIQGTNDPrQFGGSTY-GMGVHVENVRRSWDQFAVNELNLSTT 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 81 QNSELSAFRSQIEQLDGLLSNTTTGVSPA-MQRFFAALQAAANNPSSTEAREAVLAQAEGLGKTFNTLYDQLDKQNSLIN 159
Cdd:PRK08871 82 NLANKTDTEANLDMLSSMLSSVASKKIPEnLNEWFDAVKTLADSPNDLGARKVVLEKAKLISQTLNDFHETVRQQKDVTN 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 160 QQLGALASQVNHLSQSVASYNDAIAKAKSAGavpNDLMDARDEAVRKLSEMIGVTaVTQDDN--SVSLFIGSGQPLVVGN 237
Cdd:PRK08871 162 KKLDLGVERINQIALEIRDIHRLMMRTPGPH---NDLMDQHEKLVKELSQYTKVT-VTPRKNaeGFNVHIGNGHTLVSGT 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 238 TVSTLSVVPGLDDPTRYQVQLSNGNSIQNVTGLVSGGEMGGLLAYRNSALDSSYNKLGQLAITLADTINKQLGQGLDLAG 317
Cdd:PRK08871 238 EASQLKMIDGYPDPHQRRLAMVEGKGLKAIKADDIGGKLGALLDMRDEHIPYLMDELGRLATGFSSEVNTLQSQGLDLRG 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 318 KAGANLFGDINDPDITALRVLAKNGNTGNVhaNLNITDTSKLNSSDFRLDFDGTNFTARRlgDDASMQVTVSGTGPYTLS 397
Cdd:PRK08871 318 NVGGNLFTDVNSEVIARSRVVTAPNSKADV--AVFIDDISQLKGGEYALRYDGSQYTVTK--PSGEQQSLDPDGNPSAFY 393
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 398 FkdangidQGFNLTLDQLPAAGDRFTLQPTRRGAADIEATLKNASqlAFAGTARTESTTENRGTGKIgaPTLTSGpspvD 477
Cdd:PRK08871 394 L-------DGMRVEVRNPPQAGERILLRPTRNGAAQIKLETNDAK--KIAAQSYEASTTFAQGKAKF--KILQAG----D 458
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 478 PAVLQGAFGPNGISLGATlsaDGKTYTLSSPLPAgwsyvdkdgnALTGsPTLTSGNTntvrmaftdpsgqkysyeFELSG 557
Cdd:PRK08871 459 LREFEVIVSPTGDQFAVT---DTKGNILLQPQPY----------PPKG-PVTVGGTT------------------FELTE 506
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 558 VPQNSDSFKLGFNDKGiSDNRNALNLLALQTKPTVggtDNTGSTYNEAYGGLVERVGTLTAQVRASSEASATVLKQAQDS 637
Cdd:PRK08871 507 GALANDKFTANLVPSE-GDNGNLRKMQNLQTDKVM---DDGESTIIDLYHNLNTEVGLKKATATRLADVARLEKEAAQSR 582
|
650 660 670 680
....*....|....*....|....*....|....*....|.
gi 489176891 638 RDSLSGVSLDEEAANLIQFQQYYGASAQVIQVARTLFDTLI 678
Cdd:PRK08871 583 VASISGVNLDEEAANMMKFQQAYMASSRIMQAANDTFNTIL 623
|
|
| flgK |
PRK12715 |
flagellar hook-associated protein FlgK; Provisional |
4-682 |
3.85e-77 |
|
flagellar hook-associated protein FlgK; Provisional
Pssm-ID: 183698 [Multi-domain] Cd Length: 649 Bit Score: 259.67 E-value: 3.85e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 4 LLSIGLSGLGTSQTWLTITGHNITNVKTPGYSRQdAIQQTQVPQFSGAG-YMGSGSQIVDVRRLASDFLTGQLRNATSQN 82
Cdd:PRK12715 3 ILNIAYSGLNAFQRALDVTGNNIANFKTRGYSRQ-SIQFTPIASNRYAGsYIGAGVSVSSIYRNVDQFANAQVRSTLSYR 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 83 SELSAFRSQIEQLDGLLSNTTTGVSPAMQRFFAALQAAANNPSSTEAREAVLAQAEGLGKTFNTLYDQLDKQNSLINQQL 162
Cdd:PRK12715 82 TQYDAFYNQAIQIDKLLSQDGSSISVPLQTFFDSIGQLNSTPDNIATRGVVLKQSQLLAQQFNSLQTKLEEYERNSTLQV 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 163 GALASQVNHLSQSVASYNdaiAKAKSAGAVPnDLMDARDEAVRKLSEMIGVTAVTQDDNSVSLFIGSGQPLVVGNTVSTL 242
Cdd:PRK12715 162 TESVKIINRITKELAEVN---GKLLGNNNIP-ELLDHRDELLKQLSGYTDLSIFDQGDGTISVGIASGDMLVAGTQQRDL 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 243 SVVPGLDDPTRYQVQLSNGNSIQ-NVTGLVSGGEMGGLLAYRNSALDSSYNKLGQLAITLADTINKQLGQGLDLAGKAGA 321
Cdd:PRK12715 238 VVGTGKDSIFGTKIFLSSGGNNQvDITDRLTTGMLGGLIDYEKNVLGQASQLIGQMAIGLAQTFNAQHKLGMDMNSQIGK 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 322 NLFGDINDPDITALRVLAKNGNTGNVHANLNITDTSKLNSSDFRLDFDGTNFTARRL---GDDASMQVTVSGTGPYTLSf 398
Cdd:PRK12715 318 DFFTDFNSPGQMLKRSTASADNSGTAVLSVNISDISQVKLSDYDLIISDTGANELRLirkSDGTSTTLTWSSSPPAPPA- 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 399 kdANGIDQGFNLTLDQLP--AAGDRFTLQPTRRGAADIEATLKNASQLAFAGTARTESTTENRGTGKIgaptlTSGPSpV 476
Cdd:PRK12715 397 --GQVVIDGMTITVNDLSqlANNDHYTLTPTRGAARDFALEIKDAYEIALASPVKTTASLNNTGQGQI-----ILGPV-L 468
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 477 DPAVLQGAFGPNGISlgatlsadGKTYTLSSPLpagwsyvdkdgNALTGSPTLTSGNTNTVrmaFTDPSGQKYSYEFELS 556
Cdd:PRK12715 469 NTASVNKQFRIDFIS--------DTQYNLVNVT-----------DSTTAGPFAFVPNTNNV---IQIPDGITPSYSVVLS 526
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 557 GVPQNSDSFKLGFNDKGISDNRNALNLLALQTKPTVggtDNTGSTYNEAYGGLVERVGTLTAQVRASSEASATVLKQAQD 636
Cdd:PRK12715 527 GIPKSGDQFTTDYNTGGFGDNRNGLILGNIQQNKIF---SNGSETLFDRYGSLLAEVGGRTNQAKTSFESADILHKQALD 603
|
650 660 670 680
....*....|....*....|....*....|....*....|....*.
gi 489176891 637 SRDSLSGVSLDEEAANLIQFQQYYGASAQVIQVARTLFDTLIGAFR 682
Cdd:PRK12715 604 FQDSKSGVNLDEEGANLLVFQQAYQAAGKLMEISNQIMNLLFDIMR 649
|
|
| flgK_ends |
TIGR02492 |
flagellar hook-associated protein FlgK; The flagellar hook-associated protein FlgK of ... |
3-319 |
3.50e-73 |
|
flagellar hook-associated protein FlgK; The flagellar hook-associated protein FlgK of bacterial flagella has conserved N- and C-terminal domains. The central region is highly variable in length and sequence, and often contains substantial runs of low-complexity sequence. This model is built from an alignment of FlgK sequences with the central region excised. Note that several other proteins of the flagellar apparatus also are homologous in the N- and C-terminal regions to FlgK, but are excluded from this model. [Cellular processes, Chemotaxis and motility]
Pssm-ID: 274162 [Multi-domain] Cd Length: 323 Bit Score: 239.17 E-value: 3.50e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 3 DLLSIGLSGLGTSQTWLTITGHNITNVKTPGYSRQDAIQQTQVPQFSGAGYMGSGSQIVDVRRLASDFLTGQLRNATSQN 82
Cdd:TIGR02492 1 SLLNIAKSGLSASQIALSVTSNNIANANTPGYSRQRAVLTAVPAGGQGGKQIGTGVKVTSIRRIQDQFLDNQYRRANSSA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 83 SELSAFRSQIEQLDGLLSNTTT-GVSPAMQRFFAALQAAANNPSSTEAREAVLAQAEGLGKTFNTLYDQLDKQNSLINQQ 161
Cdd:TIGR02492 81 GYADSRASGLSKIEQIFNDLDGsGLGTYLNNFFNALQELAKNPDSEALRQAVLESAQALANSFNQTSNELQDLRKGINAE 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 162 LGALASQVNHLSQSVASYNDAIAKAKSAGAVPNDLMDARDEAVRKLSEMIGVTAVTQDDNSVSLFIGSGQPLVVGNTVST 241
Cdd:TIGR02492 161 IKSAVTEINSLLKQIASLNKEIKQVEASGQDANDLLDQRDLLLKELSQLIGISVSENENGTVNVYTGSGQVLVDGATVTG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 242 LSVVPGLDDPTR-----YQVQLSNGNSIQNVTGLVSGGEMGGLLAYRNSALDSSYNKLGQLAITLADTINKQLGQGLDLA 316
Cdd:TIGR02492 241 SSTSPLTADTTGgkvggDGVYLPSGSSKVTISSDLQGGKLGGLLDLRDGVLPDLQSQLDQLAKTLADEFNEVHQSGADLT 320
|
...
gi 489176891 317 GKA 319
Cdd:TIGR02492 321 GSA 323
|
|
| flgK |
PRK06665 |
flagellar hook-associated protein FlgK; Validated |
5-678 |
4.75e-65 |
|
flagellar hook-associated protein FlgK; Validated
Pssm-ID: 180650 [Multi-domain] Cd Length: 627 Bit Score: 226.47 E-value: 4.75e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 5 LSIGLSGLGTSQTWLTITGHNITNVKTPGYSRQDAIQQTQ----VPQFSGA---GYMGSGSQIVDVRRLASDFLTGQLRN 77
Cdd:PRK06665 8 IEIGKRSLFAHKQALQTTGHNISNASTKGYSRQRVTMKTFdplyAPSLNRAekpGQIGQGVEIQSIERIRDELLDSRIIE 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 78 ATSQN---SELSAFRSQIEQLDGLLSNTTtgVSPAMQRFFAALQAAANNPSSTEAREAVLAQAEGLGKTFNTLYDQLDKQ 154
Cdd:PRK06665 88 ESGRLgywKTKDKYLSQLEQVYNEPEDQS--LRTRLDDFWDSWQDLSNYPEGLAERQVVLERAQSLGERIHDRYRSLERI 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 155 NSLINQQLGALASQVNHLSQSVASYNDAIAKAKSAGAVPNDLMDARDEAVRKLSEMIGVTAVTQDDNSVSLFIGsGQPLV 234
Cdd:PRK06665 166 RDMANDEIEITVEEINNILRNIADLNEQIVKSQAMGDNPNDLLDRRDLLVDKLSSLIDVSIERSDPDEFMIHIG-GRHLV 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 235 VGNTVSTLSVVPGLDDPTRYQVQLSNgnsiQNVTGLVSGGEMGGLLAYRNSALDSSYNKLGQLAITLADTINKQLGQGLD 314
Cdd:PRK06665 245 QGNIANELDLEANPPNEGYWDILWSA----NGDPALLRTGKLGALIELRDTDIRDEINELDTLAINIVDLVNEIHRSGFG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 315 LAGKAGANLFgdindpDITALrvlakngnTGNVHANLNITDTSKLNSSD-FRLdfDGTNFTarrlgdDASMQVTVSGTGP 393
Cdd:PRK06665 321 LNGKTGRDFF------TQEYK--------LTNTRGNYDSNGDGQFDSTHiFRV--NGTNSI------DPDEKIGISGTLR 378
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 394 YTLSFKDAN-GIDQGFNLTLDQLpaagdrftLQPTRRGAADIEATLKNASQLAFAGTARTESTT--------ENRG---- 460
Cdd:PRK06665 379 FQASNKNGTvEIPYNATDTVNDV--------IKRINNSNAQVTAYLNHNNKLVLKATKADDDENpdfvirhiEDSGdflv 450
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 461 --TGKIGAptltSGPSpvdpavlqGAFGPNGISLGATLSADGKTYTLsSPL--PAGWSYVDKDgnaLTGSP-TLTSGNtn 535
Cdd:PRK06665 451 gyTGILNA----SGPE--------GAYDYQRIDTINKLQGNGADYTV-SPLkhPASWIKVNDI---IRNDPsNIAAGI-- 512
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 536 tvrmaftdpsgqkysyefelsgvpqnsdsfklGFNDK--GISDNRNALNLLALQTKPTVGGTDntgSTYNEAYGGLVERV 613
Cdd:PRK06665 513 --------------------------------GDPTNpnGIGDGRAALAIASLRNSPVMVGKS---KTFDDFFANTISNI 557
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 489176891 614 GTLTAQVRASSEASATVLKQAQDSRDSLSGVSLDEEAANLIQFQQYYGASAQVIQVARTLFDTLI 678
Cdd:PRK06665 558 GIKGETAEIEKESQNQIMKELEDLRQSVSGVNLDEELANMIEFQHGYNASARFISVSNELLDTII 622
|
|
| flgK |
PRK07191 |
flagellar hook-associated protein FlgK; Validated |
4-324 |
1.43e-57 |
|
flagellar hook-associated protein FlgK; Validated
Pssm-ID: 180871 [Multi-domain] Cd Length: 456 Bit Score: 201.97 E-value: 1.43e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 4 LLSIGLSGLGTSQTWLTITGHNITNVKTPGYSRQDAIQQTQVPQFSGAGYMGSGSQIVDVRRLASDFLTGQLRNATSQNS 83
Cdd:PRK07191 3 FIRTAFSGMQAAQAHLNATSMNIANMHTPGYSRQGVEQSAIGADGQGGVNAGNGVNVDGIRRLSQQYVVMQEWQANSQQG 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 84 ELSAFRSQIEQLDGLLSNTTTGVSPAMQRFFAALQAAANNPSSTEAREAVLAQAEGLGKTFNTLYDQLDKQNSLINQQLG 163
Cdd:PRK07191 83 YYDAGEQYFNALELVVGNKSTSLATGLNNFFSALSAATQLPDSPPMRQQVIESANAMALRFNNVNNFIVQQKKSIGQQRD 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 164 ALASQVNHLSQSVASYNDAIAKAKSAGAVPNDLMDARDEAVRKLSEMIGVTAVTQDDNSVSLFIGSGQPLVVGNTVSTLS 243
Cdd:PRK07191 163 ATVKQINSLTRSIADYNQKILKNRSDGNNISDLLDQRDLQIKKLSGLIEVRVVQQEDGTYRVSVKNGQPLVNGAVAAELA 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 244 VvpGLDDPTRYQVQLSNGNSIQNVTGLVsGGEMGGLLAYRNSALDSSYNKLGQLAITLADTINKQLGQGLDLAGKAGANL 323
Cdd:PRK07191 243 V--DTSSVGTQKLTLHFSGATQGMNMSC-GGQLGGLNDYELTTLKPLQDSTQEMAKTVADKFNDQLTKGFDMNGAPGKPL 319
|
.
gi 489176891 324 F 324
Cdd:PRK07191 320 F 320
|
|
| flgK |
PRK07739 |
flagellar hook-associated protein FlgK; Validated |
5-334 |
2.61e-44 |
|
flagellar hook-associated protein FlgK; Validated
Pssm-ID: 236084 [Multi-domain] Cd Length: 507 Bit Score: 166.34 E-value: 2.61e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 5 LSIGLSGLGTSQTWLTITGHNITNVKTPGYSRQdAIQQTQVPQFS--------GAGYMGSGSQIVDVRRLASDFLTGQLR 76
Cdd:PRK07739 8 LETARRGLFAQQAALYVTGHNIANANTPGYTRQ-RVNLAATPPYPtpgmnrpkIPGQMGTGVEAGSVERIRDQFLDIQYR 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 77 NATSQNSELSAFRSQIEQLDGLLSN-TTTGVSPAMQRFFAALQAAANNPSSTEAREAVLAQAEGLGKTFNTLYDQLDKQN 155
Cdd:PRK07739 87 RENNKLGYWETKADALSQMEDIMNEpSDTGLNKVLDQFWNSLQELSKNPENLGARSVVRQRAQALAETFNYLSQSLTDIQ 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 156 SLINQQLGALASQVNHLSQSVASYNDAIAKAKSAGAVPNDLMDARDEAVRKLSEMIGVTaVTQD----------DNSVSL 225
Cdd:PRK07739 167 NDLKSEIDVTVKEINSLASQISDLNKQIAKVEPNGYLPNDLYDQRDLLLDELSKIVNIT-VEYNksggnaledaEGTFRI 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 226 FIGSG---QPLVVGN--TVSTLSV----VPGLDDPTRYQVQLSNgNSIQNVTGLVSGGEMGGLLAYRNSALDSSYNK--- 293
Cdd:PRK07739 246 DILGGngkGTLVDGKdsTVNELSVnkddVTGLVTDLSLGGTTVS-WDDTGQPVNPSSGKLKGLLEMYGYMSGNGEEKgly 324
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 489176891 294 ------LGQLAITLADTINKQLGQGLDLAGKAGANLFGDINDPDITA 334
Cdd:PRK07739 325 pemlndLDKLAYTFATAFNEVHKQGYGLNGSTGIDFFDGTGDSTKGA 371
|
|
| flgK |
PRK07521 |
flagellar hook-associated protein FlgK; Validated |
5-233 |
2.39e-30 |
|
flagellar hook-associated protein FlgK; Validated
Pssm-ID: 236038 [Multi-domain] Cd Length: 483 Bit Score: 125.05 E-value: 2.39e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 5 LSIGLSGLGTSQTWLTITGHNITNVKTPGYSRQDAIQQTqvpqfsgagyMGSGSQIVDVRRLASDFLTGQLRNATSQNSE 84
Cdd:PRK07521 7 LNTAQSGLTATSRQTSVVSRNIANAGTPGYSRREASLVS----------GPAGGQVVGISRAQDPALLAQRLLATSAAAA 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 85 LSAFRSQIEQLDGLLSNTTTGVSPA--MQRFFAALQAAANNPSSTEAREAVLAQAEGLGKTFNTLYDQLDKQNSLINQQL 162
Cdd:PRK07521 77 QDTLADGLERLASTVGDNDYEGSPSarLSDFQAALQTAASSPDNTTLAQAAVDAAQDLANSLNDASDAVQSARADADAEI 156
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 489176891 163 GALASQVNHLSQSVASYNDAIAKAKSAGAVPNDLMDARDEAVRKLSEMIGVTAVTQDDNSVSLFIGSGQPL 233
Cdd:PRK07521 157 ADSVDTLNDLLAQFEDANNAVVSGTATGRDASDALDQRDKLLKQISQIVGVTTVTRDNNDMALYTDGGVTL 227
|
|
| flgK |
PRK08471 |
flagellar hook-associated protein FlgK; Validated |
5-679 |
2.37e-26 |
|
flagellar hook-associated protein FlgK; Validated
Pssm-ID: 236270 [Multi-domain] Cd Length: 613 Bit Score: 114.38 E-value: 2.37e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 5 LSIGLSGLGTSQTWLTITGHNITNVKTPGYSRQDAIQQTQVPQFSGAGYMGSGSQIVDVRRLASDFLTGQLRNATSQNsE 84
Cdd:PRK08471 8 LNTGYTGLQAAQVMVDTTGNNISNASSEFYTRQRVVQSAQAALNTGGGNVGTGTDIETIVRIHDEFVYSRYKKASTEL-E 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 85 LSAFRSQIEQ--------LDGllsnttTGVSPAMQRFFAALQAAANNPSSTEAREAVLAQAEGLGKTFNTLYDQLDKQNS 156
Cdd:PRK08471 87 YTDYEFSTLQeasqyfpdLDD------TGILKDLQDYFNAWNDFASNPKDSAQKQALAQKTETLTNNIKDTRERLDTLQK 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 157 LINQQLGALASQVNHLSQSVASYNDAI--AKAKSAGAVPNDLMDARDEAVRKLSEMIGVTAVTQDDNSVSLF-------- 226
Cdd:PRK08471 161 KVNEELKVTVDEINSLGKQIAEINKQIkeVEAGKTLKHANELRDKRDELELTLSKLVGANVFKSSIKSDSRLdttsadfg 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 227 ------IGsGQPLVVGNTVSTLSVVPGLDDPTRYQV--QLSNGNSIqNVTGLVSGGEMGGLLAYRNSALDSSYNKLG--- 295
Cdd:PRK08471 241 esynlnIG-GFNIVDGSNFHPLVLDEDENKGGFNQIyyESDDFKRI-DITDKISGGKVGALLDLRGRNYDGGSGGTLdgk 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 296 -QLAITLADTINKQLGQgldlagkAGANLFGD-----INDPDITAlrvlakNGNTGNVHANLNITDTSklnssdFRL--- 366
Cdd:PRK08471 319 iQDYIDNLDTFAKTLIE-------STNNIYAQsatesIESDPLSL------KSDEALVDTNYNIQNGS------FDLvvy 379
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 367 DFDGtNFTARRlgddaSMQVTVSGTGPYTLSFKDANGIDQGFNLTLDQLpaaGDRFT---LQPTRRGAADIEATLKNASQ 443
Cdd:PRK08471 380 DTDG-KEVARK-----TINIDVITTMNDIVQQINANTDDNNDNNANNDV---DDYFTasfNNDTKTGDGLFQIQPKNASQ 450
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 444 LAFAgtartesTTENRGTGkigaptltsgpspvdpavLQGAFGPNGISLGatlsADGKTYTLSSplpagwSYVdKDGNAL 523
Cdd:PRK08471 451 GYTV-------SIEDKGTN------------------FPGALGLNRFFDG----DDASNISLNS------SYK-KDPTTI 494
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 524 TGSPTLTSGNtNTVRMAFTDPSGQKYSYefelsgvpqnsdsfklgFNDKGISDNrnalnllalqtkptvggtdntgSTYN 603
Cdd:PRK08471 495 RAWLAPVDGN-NDVANKMQQLQYDKVNF-----------------YNNKGTIKN----------------------MTIE 534
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 489176891 604 EAYGGLVERVGTLTAQVRASSEASATVLKQAQDSRDSLSGVSLDEEAANLIQFQQYYGASAQVIQVARTLFDTLIG 679
Cdd:PRK08471 535 EYYRFLTTKIASDTEKNNRINDTNKALLNSVKKEYQSISGVSTDEELVNLIKFQSSYGAAAKIITTIDQMLDTLLG 610
|
|
| flgK |
PRK06799 |
flagellar hook-associated protein FlgK; Validated |
9-221 |
5.29e-18 |
|
flagellar hook-associated protein FlgK; Validated
Pssm-ID: 180699 [Multi-domain] Cd Length: 431 Bit Score: 86.86 E-value: 5.29e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 9 LSGLGTSQTWLTITGHNITNVKTPGYSRQdAIQQTQVPQ---FSGAGYMGSGSQIVDVRRLASDFLTGQLRNATSQNSE- 84
Cdd:PRK06799 10 LSGMLAAQMGLQTTQQNLSNIHTPGYVRQ-MVNYGSVGAsggLLPEQQIGYGVQTLGVDRITDEVKTKQYNDQLSQLSYy 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 85 --LSAFRSQIEQLDGllsntTTG---VSPAMQRFFAALQAAANNPSSTEAREAVLAQAEGLGKTFNTLYDQLDKQNSLIN 159
Cdd:PRK06799 89 nyMNSALSRVESMVG-----TTGknsLSSLMDGFFNAFREVAKNPEQANYYDTLISETGKFTSQLNRLAKGLDELEAQTT 163
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 489176891 160 QQLGALASQVNHLSQSVASYNDAIAKAKSagAVPNDLMDARDEAVRKLSEMIGVTAVTQDDN 221
Cdd:PRK06799 164 EDIEAHVNEFNRLAKSLAEANKKIGQAGT--QVPNQLLDERDRILTEMSKYANIEVSYESMN 223
|
|
| flgK |
PRK06799 |
flagellar hook-associated protein FlgK; Validated |
599-678 |
2.22e-07 |
|
flagellar hook-associated protein FlgK; Validated
Pssm-ID: 180699 [Multi-domain] Cd Length: 431 Bit Score: 53.73 E-value: 2.22e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 599 GSTYNEAYGGLVERVGTLTAQVRASSEASATVLKQAQDSRDSLSGVSLDEEAANLIQFQQYYGASAQVIQVARTLFDTLI 678
Cdd:PRK06799 349 GLSYKQALDQFIVGVASDKSAVNAYQKIHTDLLEGIQQEKMSLEGVNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSLF 428
|
|
| Flg_bbr_C |
pfam06429 |
Flagellar basal body rod FlgEFG protein C-terminal; This family consists of a number of ... |
642-678 |
3.97e-05 |
|
Flagellar basal body rod FlgEFG protein C-terminal; This family consists of a number of C-terminal domains of unknown function. This domain seems to be specific to flagellar basal-body rod and flagellar hook proteins in which pfam00460 is often present at the extreme N terminus.
Pssm-ID: 428939 [Multi-domain] Cd Length: 74 Bit Score: 42.25 E-value: 3.97e-05
10 20 30
....*....|....*....|....*....|....*..
gi 489176891 642 SGVSLDEEAANLIQFQQYYGASAQVIQVARTLFDTLI 678
Cdd:pfam06429 36 SNVNPVEEMVNMIEAQRAYEANSKVIQTADEMLQTAN 72
|
|
| flgL |
PRK08870 |
flagellar hook-associated protein FlgL; Reviewed |
316-441 |
2.32e-04 |
|
flagellar hook-associated protein FlgL; Reviewed
Pssm-ID: 236345 [Multi-domain] Cd Length: 404 Bit Score: 44.13 E-value: 2.32e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 316 AGKAGANLFGDINDPDITA-LRVLAKNGNTGNVHANLNITDTSKLNSSDFRLDFDGTNFTARRLGDDASMQVTVSGTGPY 394
Cdd:PRK08870 175 TNDPGDEVFMSVPNGGGDYvPNANASNTGTGLLGSASITDPSDPVNGDTYTITFTDNGAGGTNTYVTDSSTGTVVTAQAY 254
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 489176891 395 TlsfkDANGID-QGFNLTLDQLPAAGDRFTLQPtrRGAADIEATLKNA 441
Cdd:PRK08870 255 D----AGQPINfNGVEVQISGAPAAGDSFTLTP--APQASIFDTLDDA 296
|
|
| FlgEFG_subfam |
TIGR03506 |
flagellar hook-basal body protein; This model encompasses three closely related flagellar ... |
3-65 |
3.51e-04 |
|
flagellar hook-basal body protein; This model encompasses three closely related flagellar proteins usually denoted FlgE, FlgF and FlgG. The names have often been mis-assigned, however. Three equivalog models, TIGR02489, TIGR02490 and TIGR02488, respectively, separate the individual forms into three genome-context consistent groups. The major differences between these genes are architectural, with variable central sections between relatively conserved N- and C-terminal domains. More distantly related are two other flagellar apparatus familis, FlgC (TIGR01395) which consists of little else but the N-and C-terminal domains and FlgK (TIGR02492) with a substantial but different central domain.
Pssm-ID: 274616 [Multi-domain] Cd Length: 231 Bit Score: 42.62 E-value: 3.51e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 489176891 3 DLLSIGLSGLGTSQTWLTITGHNITNVKTPGYSRQDAIQQT-QVPQFSGAGYMGSGSQIVDVRR 65
Cdd:TIGR03506 1 MALYTALSGLNAQSSALDVIANNIANANTTGFKRSRAEFQDlLSQSVSGSGQVGGGVRTSGVAT 64
|
|
| FlgG |
COG4786 |
Flagellar basal body rod protein FlgG [Cell motility]; |
5-77 |
3.57e-04 |
|
Flagellar basal body rod protein FlgG [Cell motility];
Pssm-ID: 443816 [Multi-domain] Cd Length: 260 Bit Score: 42.88 E-value: 3.57e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 5 LSIGLSGLGTSQTWLTITGHNITNVKTPGYSRQDA---------IQQTQVPQFSGAGY-----MGSGSQIVDVRRlasDF 70
Cdd:COG4786 1 LYTAASGMLAQQTRLDVISNNLANVNTTGFKRDRAvfedllyqlIRRPGAPSSQGTQTpvglqLGTGVRVAATQT---DF 77
|
....*..
gi 489176891 71 LTGQLRN 77
Cdd:COG4786 78 TQGSLQQ 84
|
|
| FlgE |
COG1749 |
Flagellar hook protein FlgE [Cell motility]; |
5-64 |
9.03e-04 |
|
Flagellar hook protein FlgE [Cell motility];
Pssm-ID: 441355 [Multi-domain] Cd Length: 414 Bit Score: 42.08 E-value: 9.03e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 489176891 5 LSIGLSGLGTSQTWLTITGHNITNVKTPGYSRQDAIQQ---TQVPQFSGAGYMGSGSQIVDVR 64
Cdd:COG1749 5 FNTGVSGLNAASTALDVIGNNIANSNTVGFKSSRAEFAdlvAQSLSGANPTQVGGGVRVASVA 67
|
|
| flgC |
PRK12632 |
flagellar basal body rod protein FlgC; Provisional |
1-67 |
3.10e-03 |
|
flagellar basal body rod protein FlgC; Provisional
Pssm-ID: 183637 [Multi-domain] Cd Length: 130 Bit Score: 38.25 E-value: 3.10e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489176891 1 MSDL---LSIGLSGLGTSQTWLTITGHNITNVKTPGYSRQDAIQQTQVPQFSGAGYMGSGSQIVDVRRLA 67
Cdd:PRK12632 1 MTDFsksLSVSASGMRAQALRLRHVSENIANADTPGYRRKTVSFQEARDFDPGSGLVSTGPVRLDRSELP 70
|
|
| |
