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Conserved domains on  [gi|489121856|ref|WP_003031677|]
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MULTISPECIES: maltose ABC transporter permease MalG [Citrobacter]

Protein Classification

maltose ABC transporter permease MalG( domain architecture ID 10793519)

maltose ABC transporter permease MalG is part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
malG PRK10998
maltose ABC transporter permease MalG;
1-296 0e+00

maltose ABC transporter permease MalG;


:

Pssm-ID: 182891  Cd Length: 296  Bit Score: 565.49  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121856   1 MAMVQPKSQKLRLLTTHLLLLIFIAAIMFPLLMVIAISLREGNFATGSLIPENISWEHWKLALGFSVEHADGRVTPPPFP 80
Cdd:PRK10998   1 MAMVQPKSQKLRLFATHLLLLGFIALIMFPLLMVIAISLREGNFATGSLIPEQISWEHWKLALGFSVEHADGRVTPPPFP 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121856  81 VLLWLWNSVKVASITAIGIVTLSTTCAYAFARMRFPGKATLLKGMLIFQMFPAVLSLVALYALFDRLGQYIPFIGLNTHG 160
Cdd:PRK10998  81 VLLWLWNSVKVAGITAIGIVALSTTCAYAFARMRFKGKATLLKGMLIFQMFPAVLSLVALYALFDRLGQYIPFIGLNTHG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121856 161 GVIFAYLGGIALHVWTIKGYFETIDGSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDV 240
Cdd:PRK10998 161 GVIFAYLGGIALHVWTIKGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDV 240

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 489121856 241 NSYTLAVGMQQYLNPQNYLWGDFAAAAVLSAIPITLVFLLAQRWLVNGLTAGGVKG 296
Cdd:PRK10998 241 NSYTLAVGMQQYLNPQNYLWGDFAAAAVLSAIPITVVFLLAQRWLVGGLTAGGVKG 296
 
Name Accession Description Interval E-value
malG PRK10998
maltose ABC transporter permease MalG;
1-296 0e+00

maltose ABC transporter permease MalG;


Pssm-ID: 182891  Cd Length: 296  Bit Score: 565.49  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121856   1 MAMVQPKSQKLRLLTTHLLLLIFIAAIMFPLLMVIAISLREGNFATGSLIPENISWEHWKLALGFSVEHADGRVTPPPFP 80
Cdd:PRK10998   1 MAMVQPKSQKLRLFATHLLLLGFIALIMFPLLMVIAISLREGNFATGSLIPEQISWEHWKLALGFSVEHADGRVTPPPFP 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121856  81 VLLWLWNSVKVASITAIGIVTLSTTCAYAFARMRFPGKATLLKGMLIFQMFPAVLSLVALYALFDRLGQYIPFIGLNTHG 160
Cdd:PRK10998  81 VLLWLWNSVKVAGITAIGIVALSTTCAYAFARMRFKGKATLLKGMLIFQMFPAVLSLVALYALFDRLGQYIPFIGLNTHG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121856 161 GVIFAYLGGIALHVWTIKGYFETIDGSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDV 240
Cdd:PRK10998 161 GVIFAYLGGIALHVWTIKGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDV 240

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 489121856 241 NSYTLAVGMQQYLNPQNYLWGDFAAAAVLSAIPITLVFLLAQRWLVNGLTAGGVKG 296
Cdd:PRK10998 241 NSYTLAVGMQQYLNPQNYLWGDFAAAAVLSAIPITVVFLLAQRWLVGGLTAGGVKG 296
MalG COG3833
ABC-type maltose transport system, permease component MalG [Carbohydrate transport and ...
 3-296 1.48e-113

ABC-type maltose transport system, permease component MalG [Carbohydrate transport and metabolism];


Pssm-ID: 443045 [Multi-domain]  Cd Length: 282  Bit Score: 329.03  E-value: 1.48e-113
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121856   3 MVQPKSQKLRLLTTHLLLLIFIAAIMFPLLMVIAISLREGNF-ATGSLIPENISWEHWKLALGfsvehadgrvtppPFPV 81
Cdd:COG3833    5 KSRKRRRRLKLGLRHLVLIILAIIALFPILWVVSASFNPGGSlYSSSLIPENFTLENYKKLFT-------------ETPF 71

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121856  82 LLWLWNSVKVASITAIGIVTLSTTCAYAFARMRFPGKATLLKGMLIFQMFPAVLSLVALYALFDRLGQyipfigLNTHGG 161
Cdd:COG3833   72 LRWFLNSLIVAVVTAIISVFLAALAAYAFSRFRFKGRKAGLLALLLLQMFPAFLALVALYLLLSALGL------LNTLLG 145

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121856 162 VIFAYLGG-IALHVWTIKGYFETIDGSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDV 240
Cdd:COG3833  146 LILVYLGGaIPFNTWLMKGYFDTIPKELDEAAKIDGASHFQIFFRIILPLAKPILAVVALLSFIGPWNDFILASVLLRSP 225

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 489121856 241 NSYTLAVGMQQYLNPQ-NYLWGDFAAAAVLSAIPITLVFLLAQRWLVNGLTAGGVKG 296
Cdd:COG3833  226 ENYTLAVGLYSFVSDQrNTNWGVFAAGAVLVAIPIVILFLFLQRYLVSGLTAGGVKG 282
TM_PBP2 cd06261
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ...
 85-274 7.28e-19

Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.


Pssm-ID: 119394 [Multi-domain]  Cd Length: 190  Bit Score: 82.33  E-value: 7.28e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121856  85 LWNSVKVASITAIGIVTLSTTCAYAFARMRFPGKATLLKGMLIFQMFPAVLSLVALYALFDRLGQYIPFIGLnTHGGVIF 164
Cdd:cd06261    1 LLNTLLLALIATLLALVLGLLLGIILARKRGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLLGWGILPGL-GLPALIL 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121856 165 AYLGGIALHVWTIKGYFETIDGSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDVNSYT 244
Cdd:cd06261   80 ALLLIAPFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLGGGEAPGP 159

                        170       180       190
                 ....*....|....*....|....*....|
gi 489121856 245 LAVGMQQYLNPQNYLWGDFAAAAVLSAIPI 274
Cdd:cd06261  160 GTGLLLIFAILFPGDLGVAAAVALILLLLS 189
PhnU2 TIGR03262
putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding ...
 85-291 2.07e-08

putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 274495 [Multi-domain]  Cd Length: 546  Bit Score: 55.07  E-value: 2.07e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121856   85 LWNSVKVASITAIGIVTLSTTCAYAFARMRFPGKATLLKGMLIFQMFPAVLSLVALYALFDRLGQYIPFIGlnthGGVIF 164
Cdd:TIGR03262  56 LGNSLTVSAIVTAIVVPLAFAFAYALTRSRIPGKGAFRLVALLPLLAPSLLPAISLIYLFGNQGLLKGLLG----GFSIY 131

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121856  165 AYLG-GIALHVWT-------IKGYFETIDGSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLL 236
Cdd:TIGR03262 132 GFWGiVIGEVFYTfphalmiLVTALSLADGRLYEAARAMGASPWRTFFTVTLPGAKYGLISAAFVVFTLVITDFGVPKVI 211

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 489121856  237 LRDVNSYTLAVgMQQYLNPQNYLWGdfAAAAVLSAIPITLVFLL---AQRWLVNGLTA 291
Cdd:TIGR03262 212 GGDYNVLATDI-YKQVIGQQNFPMG--AVVGVLLLLPALLAFGIdraIQRRQRAQLSS 266
BPD_transp_1 pfam00528
Binding-protein-dependent transport system inner membrane component; The alignments cover the ...
 125-286 6.60e-07

Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.


Pssm-ID: 334128 [Multi-domain]  Cd Length: 183  Bit Score: 48.45  E-value: 6.60e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121856  125 MLIFQMFPAVLSLVALYALFDRLGqyipfIGLNTHGGVIFAYLGGIALHVWTIKGYFETIDGSLEEAAALDGATPWQAFR 204
Cdd:pfam00528  24 IDLLQALPSFVLAILLVVIAILSI-----LGHGILPAIILALLGWAGYARLIRRAALRSLPSDLVEAARALGASRWQIFR 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121856  205 LVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDVN-SYTLAVGMQQYLNPQNYLwgdFAAAAVLSAIPITLVFLLAQR 283
Cdd:pfam00528  99 KIILPNALPPILTGLALAFGGALGGAVLLEFLGSWPGlGLLLIEAILGYDYPEIQG---PVLAAALILLLLNLLVDILQR 175


                  ...
gi 489121856  284 WLV 286
Cdd:pfam00528 176 LLD 178
 
Name Accession Description Interval E-value
malG PRK10998
maltose ABC transporter permease MalG;
1-296 0e+00

maltose ABC transporter permease MalG;


Pssm-ID: 182891  Cd Length: 296  Bit Score: 565.49  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121856   1 MAMVQPKSQKLRLLTTHLLLLIFIAAIMFPLLMVIAISLREGNFATGSLIPENISWEHWKLALGFSVEHADGRVTPPPFP 80
Cdd:PRK10998   1 MAMVQPKSQKLRLFATHLLLLGFIALIMFPLLMVIAISLREGNFATGSLIPEQISWEHWKLALGFSVEHADGRVTPPPFP 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121856  81 VLLWLWNSVKVASITAIGIVTLSTTCAYAFARMRFPGKATLLKGMLIFQMFPAVLSLVALYALFDRLGQYIPFIGLNTHG 160
Cdd:PRK10998  81 VLLWLWNSVKVAGITAIGIVALSTTCAYAFARMRFKGKATLLKGMLIFQMFPAVLSLVALYALFDRLGQYIPFIGLNTHG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121856 161 GVIFAYLGGIALHVWTIKGYFETIDGSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDV 240
Cdd:PRK10998 161 GVIFAYLGGIALHVWTIKGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDV 240

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 489121856 241 NSYTLAVGMQQYLNPQNYLWGDFAAAAVLSAIPITLVFLLAQRWLVNGLTAGGVKG 296
Cdd:PRK10998 241 NSYTLAVGMQQYLNPQNYLWGDFAAAAVLSAIPITVVFLLAQRWLVGGLTAGGVKG 296
MalG COG3833
ABC-type maltose transport system, permease component MalG [Carbohydrate transport and ...
 3-296 1.48e-113

ABC-type maltose transport system, permease component MalG [Carbohydrate transport and metabolism];


Pssm-ID: 443045 [Multi-domain]  Cd Length: 282  Bit Score: 329.03  E-value: 1.48e-113
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121856   3 MVQPKSQKLRLLTTHLLLLIFIAAIMFPLLMVIAISLREGNF-ATGSLIPENISWEHWKLALGfsvehadgrvtppPFPV 81
Cdd:COG3833    5 KSRKRRRRLKLGLRHLVLIILAIIALFPILWVVSASFNPGGSlYSSSLIPENFTLENYKKLFT-------------ETPF 71

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121856  82 LLWLWNSVKVASITAIGIVTLSTTCAYAFARMRFPGKATLLKGMLIFQMFPAVLSLVALYALFDRLGQyipfigLNTHGG 161
Cdd:COG3833   72 LRWFLNSLIVAVVTAIISVFLAALAAYAFSRFRFKGRKAGLLALLLLQMFPAFLALVALYLLLSALGL------LNTLLG 145

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121856 162 VIFAYLGG-IALHVWTIKGYFETIDGSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDV 240
Cdd:COG3833  146 LILVYLGGaIPFNTWLMKGYFDTIPKELDEAAKIDGASHFQIFFRIILPLAKPILAVVALLSFIGPWNDFILASVLLRSP 225

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 489121856 241 NSYTLAVGMQQYLNPQ-NYLWGDFAAAAVLSAIPITLVFLLAQRWLVNGLTAGGVKG 296
Cdd:COG3833  226 ENYTLAVGLYSFVSDQrNTNWGVFAAGAVLVAIPIVILFLFLQRYLVSGLTAGGVKG 282
UgpE COG0395
ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and ...
 1-296 3.03e-68

ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and metabolism];


Pssm-ID: 440164 [Multi-domain]  Cd Length: 282  Bit Score: 213.42  E-value: 3.03e-68
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121856   1 MAMVQPKSQKLRLLTTHLLLLIFIAAIM-FPLLMVIAISLREGN--FATG-SLIPENISWEHWKLALGFSvehadgrvtp 76
Cdd:COG0395    1 MSATARRRRRRLGRILLYLLLILLALLFlFPLYWMVVTSFKPPAeiFSGPpSLLPSEFTLENYRAAFTDG---------- 70

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121856  77 ppfPVLLWLWNSVKVASITAIGIVTLSTTCAYAFARMRFPGKATLLKGMLIFQMFPAVLSLVALYALFDRLGQyipfigL 156
Cdd:COG0395   71 ---PFGRYLLNSLIVAVVSTVLSLLLSSLAAYALARFRFRGRKLLFLLILATLMIPGQVLLIPLYLLFRQLGL------L 141

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121856 157 NTHGGVIFAYLG-GIALHVWTIKGYFETIDGSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASL 235
Cdd:COG0395  142 NTYWGLILPYLAfGLPFGIFLLRQFFRSIPRELEEAARIDGASEFRIFWRIVLPLSKPALATVAIFTFIGAWNDFLWPLI 221

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 489121856 236 LLRDVNSYTLAVGMQQYLNPQNYLWGDFAAAAVLSAIPITLVFLLAQRWLVNGLTAGGVKG 296
Cdd:COG0395  222 LLTSPDLRTLPVGLASFQGQYGTDWGLLMAAAVIATLPVLILFLFLQRYFVRGLTAGAVKG 282
PotC COG1177
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport ...
 22-285 1.21e-25

ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism];


Pssm-ID: 440790 [Multi-domain]  Cd Length: 262  Bit Score: 102.11  E-value: 1.21e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121856  22 IFIAAIMFPLLMVIAISLREGNFATgsLIPENISWEHWKLALgfsvehADGRVTPPpfpvllwLWNSVKVASITAIGIVT 101
Cdd:COG1177   15 LVLLFLYLPILVLVLYSFNDSWFLT--FPPEGFTLRWYAELF------SDPRLLDA-------LLNSLLIALLSTLLATV 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121856 102 LSTTCAYAFARMRFPGKATLLKGMLIFQMFPAVLSLVALYALFDRLGQYipfiglNTHGGVIFAYL-GGIALHVWTIKGY 180
Cdd:COG1177   80 LGTPAALALARYRFRGRRLLLALLLLPLVVPGIVLGVALLLLFSALGLS------GGLWGLILAHVvFTLPFVVLVVLAR 153

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121856 181 FETIDGSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVaSLLLRDVNSYTLAVGMQQYLNPQNYLW 260
Cdd:COG1177  154 LQGFDPSLEEAARDLGASPWQTFRRVTLPLIAPGILAGALLAFTLSFDEFVI-TLFLAGPGVTTLPVYIYSMIRRGISPE 232

                        250       260
                 ....*....|....*....|....*
gi 489121856 261 GdfAAAAVLSAIPITLVFLLAQRWL 285
Cdd:COG1177  233 I--NALSTLLILLSLLLLLLAERLR 255
FbpB COG1178
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
85-296 1.51e-21

ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440791 [Multi-domain]  Cd Length: 538  Bit Score: 94.07  E-value: 1.51e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121856  85 LWNSVKVASITAIGIVTLSTTCAYAFARMRFPGKATLLKGMLIFQMFPAVLSLVALYALFDRLGQY---------IPFIG 155
Cdd:COG1178   56 LGNTLLLALLVTLLSLLLGVPLAWLLARTDFPGRRLLRWLLLLPLALPPYVVALAWIALFGPNGLLntllralfgLEPPD 135

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121856 156 LNTHGGVIFAY-LGGIALHVWTIKGYFETIDGSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVAS 234
Cdd:COG1178  136 IYGLGGIILVLvLFNYPYVYLLLRAALRSIDASLEEAARSLGASPWRAFRRVTLPLLRPAIAAGALLVFLLCLADFGTPL 215

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 489121856 235 LLLRDVNsyTLAVGMQQYLNPQnylwGDFAAAAVLSAI--PITLVFLLAQRWLVNGLTAGGVKG 296
Cdd:COG1178  216 VLGGGYT--TLTTAIYQAWLGD----FDLGAAAALALVllLLVLLLLLLERRLRRRRRYATVGG 273
FbpB COG1178
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
22-285 5.86e-21

ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440791 [Multi-domain]  Cd Length: 538  Bit Score: 92.53  E-value: 5.86e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121856  22 IFIAAIMFPLLMVIAISLRegnfatgSLIPENISWEHWKLALGFSVehadgrvtpppfpVLLWLWNSVKVASITAIGIVT 101
Cdd:COG1178  297 LVLLGLLLPLLALLLWSLT-------KALDDNLTLDNYRFVLLDPS-------------LLRALLNSLLLALLAALLAVL 356

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121856 102 LSTTCAYAFARMRFPGKATLLK-GMLIFQMFPAVLSLvalyALFDRLGQYIPFIGLNTHGGVIFAY-LGGIALHVWTIKG 179
Cdd:COG1178  357 LALLLAYLVRRRRGRLARLLDRlAMLPYAVPGIVLGL----GLLLLFNRPLPLLLYGTLAILVLAYvVRFLPFALRSLEA 432

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121856 180 YFETIDGSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPvASLLLRDVNSYTLAVGMQQYLnpQNYL 259
Cdd:COG1178  433 ALAQIDPSLEEAARSLGASPLRTLRRVTLPLLRPGLLAAALLVFVTSMKELS-ATLLLRPPGFETLAVLIYQLA--SSGR 509

                        250       260
                 ....*....|....*....|....*.
gi 489121856 260 WGDFAAAAVLSAIPITLVFLLAQRWL 285
Cdd:COG1178  510 YGEAAALALLLVLVSLLPVLLLERLL 535
TM_PBP2 cd06261
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ...
 85-274 7.28e-19

Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.


Pssm-ID: 119394 [Multi-domain]  Cd Length: 190  Bit Score: 82.33  E-value: 7.28e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121856  85 LWNSVKVASITAIGIVTLSTTCAYAFARMRFPGKATLLKGMLIFQMFPAVLSLVALYALFDRLGQYIPFIGLnTHGGVIF 164
Cdd:cd06261    1 LLNTLLLALIATLLALVLGLLLGIILARKRGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLLGWGILPGL-GLPALIL 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121856 165 AYLGGIALHVWTIKGYFETIDGSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDVNSYT 244
Cdd:cd06261   80 ALLLIAPFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLGGGEAPGP 159

                        170       180       190
                 ....*....|....*....|....*....|
gi 489121856 245 LAVGMQQYLNPQNYLWGDFAAAAVLSAIPI 274
Cdd:cd06261  160 GTGLLLIFAILFPGDLGVAAAVALILLLLS 189
CysU COG0555
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]; ...
 85-229 1.23e-15

ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440321 [Multi-domain]  Cd Length: 268  Bit Score: 75.17  E-value: 1.23e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121856  85 LWNSVKVASITAIGIVTLSTTCAYAFARMRFPGKAtLLKGM--LIFQMFPAV--LSLVALYALFDRLGQYIPFIGLNthg 160
Cdd:COG0555   56 LKLSLGTALIAALINLVFGLPLAWVLVRYRFPGKR-LVDALvdLPFALPTAVagIALLLLFGPNGWLGQLLAPLGIK--- 131

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 489121856 161 gVIFAYLG--------GIALHVWTIKGYFETIDGSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITE 229
Cdd:COG0555  132 -VAFTPLGivlaqtfvSLPFVVRTVQPVLEELDPELEEAAATLGASRWQTFRRVILPLLLPALLTGFALAFARALGE 207
PotB COG1176
ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport ...
 22-293 3.93e-15

ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism];


Pssm-ID: 440789 [Multi-domain]  Cd Length: 287  Bit Score: 74.03  E-value: 3.93e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121856  22 IFIAAIMFPLLMVIAISLREGNFATGslIPENISWEHWKLALGFSVEHADgrvtpppfpvllwLWNSVKVASITAIGIVT 101
Cdd:COG1176   21 WLLLFFVLPLLLLLVYSFTTRDPYGG--VVPGFTLENYARLFTDPLYLKV-------------LLRTLWIALLTTLICLL 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121856 102 LSTTCAYAFARMRFPGKATLLkGMLIFQMFpaVLSLVALYA---------LFDRLGQYIPFIG-----LNTHGGVIFAYL 167
Cdd:COG1176   86 LGYPIAYFLARAPPRWRNLLL-LLVILPFW--TSFLVRTYAwivllgrngLLNSLLLALGLIDeplrlLYTEFAVVIGLV 162

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121856 168 ggialHVW------TIKGYFETIDGSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLlrdVN 241
Cdd:COG1176  163 -----YVYlpfmvlPLYAALEKIDPSLLEAARDLGASPWQTFRRVILPLSLPGIIAGSLLVFIPALGAFVTPALL---GG 234

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 489121856 242 SYTLAVGM---QQYLNPQNylWGdFAAAAVLSAIPITLVFLLAQRWLVNGLTAGG 293
Cdd:COG1176  235 GKVLMIGNliyQQFLSALN--WP-LAAALAVVLLLIVLLVLLLYLRLLRRRRLLG 286
PRK10973 PRK10973
sn-glycerol-3-phosphate ABC transporter permease UgpE;
24-289 1.57e-13

sn-glycerol-3-phosphate ABC transporter permease UgpE;


Pssm-ID: 182875 [Multi-domain]  Cd Length: 281  Bit Score: 69.38  E-value: 1.57e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121856  24 IAAIMFPLLMV-IAISLREGNFATG--SLIPENISWEHWKlalgfSVEHADGRVTPPPFPVLLWlwNSVKVASITAIGIV 100
Cdd:PRK10973  20 IAVILFPLYVAfVAATLDKQAVFAVpmTLIPGTHLLENIA-----NIWVNGVGNNSAPFGRMLL--NSFVMAFSITVGKI 92

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121856 101 TLSTTCAYAFARMRFPGKATLLKGMLIFQMFPAVLSLVALYALFDRLGQyipfigLNTHGGVIFAYLGGiALHVWTIKGY 180
Cdd:PRK10973  93 TVSMLSAFAIVWFRFPLRNLFFWMIFITLMLPVEVRIFPTVEVIANLKM------LDSYAGLTLPLMAS-ATATFLFRQF 165

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121856 181 FETIDGSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDVNSYTLAVGMQQYLNPQNYL- 259
Cdd:PRK10973 166 FMTLPDELVEAARIDGASPMRFFWDIVLPLSKTNLAALFVITFIYGWNQYLWPLLIITDVSLGTAVAGIKGMIATGEGTt 245

                        250       260       270
                 ....*....|....*....|....*....|.
gi 489121856 260 -WGDFAAAAVLSAIPITLVFLLAQRWLVNGL 289
Cdd:PRK10973 246 eWNQVMAAMLLTLIPPVVIVLAMQRAFVRGL 276
modB PRK09421
molybdate ABC transporter permease subunit;
88-229 1.12e-10

molybdate ABC transporter permease subunit;


Pssm-ID: 181841  Cd Length: 229  Bit Score: 60.32  E-value: 1.12e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121856  88 SVKVASITAIGIVTLSTTCAYAFARMRFPGKAtLLKGMLIFQM-FPAVLSLVALYALFDRLGqyipFIG--LNTHGGVIF 164
Cdd:PRK09421  14 SLKVSSVAVLFSLPFGILVAWLLARCRFPGKS-LLDSLLHLPLvLPPVVTGYLLLISMGRRG----FIGqwLYEWFGISF 88

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 489121856 165 AY----------LGGIALHVWTIKGYFETIDGSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITE 229
Cdd:PRK09421  89 AFswrgaalaaaVMAFPLMVRAIRLSLEAVDRKLEQAARTLGASPWRVFFTITLPLTLPGIIAGTVLAFARSLGE 163
PhnU2 TIGR03262
putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding ...
 85-291 2.07e-08

putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 274495 [Multi-domain]  Cd Length: 546  Bit Score: 55.07  E-value: 2.07e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121856   85 LWNSVKVASITAIGIVTLSTTCAYAFARMRFPGKATLLKGMLIFQMFPAVLSLVALYALFDRLGQYIPFIGlnthGGVIF 164
Cdd:TIGR03262  56 LGNSLTVSAIVTAIVVPLAFAFAYALTRSRIPGKGAFRLVALLPLLAPSLLPAISLIYLFGNQGLLKGLLG----GFSIY 131

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121856  165 AYLG-GIALHVWT-------IKGYFETIDGSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLL 236
Cdd:TIGR03262 132 GFWGiVIGEVFYTfphalmiLVTALSLADGRLYEAARAMGASPWRTFFTVTLPGAKYGLISAAFVVFTLVITDFGVPKVI 211

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 489121856  237 LRDVNSYTLAVgMQQYLNPQNYLWGdfAAAAVLSAIPITLVFLL---AQRWLVNGLTA 291
Cdd:TIGR03262 212 GGDYNVLATDI-YKQVIGQQNFPMG--AVVGVLLLLPALLAFGIdraIQRRQRAQLSS 266
3a0106s02 TIGR00969
sulfate ABC transporter, permease protein; This model describes a subfamily of both CysT and ...
 85-279 2.27e-08

sulfate ABC transporter, permease protein; This model describes a subfamily of both CysT and CysW, paralogous and generally tandemly encoded permease proteins of the sulfate ABC transporter. [Transport and binding proteins, Anions]


Pssm-ID: 273370  Cd Length: 271  Bit Score: 53.90  E-value: 2.27e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121856   85 LWNSVKVASITAIGIVTLSTTCAYAFARMRFPGKATLLKGM-LIFQMFPAV--LSLVALYALFDRLGQYIPFIGLNthgg 161
Cdd:TIGR00969  62 YNLTLLMALIAVPLNGVFGLLIAWVLTRYQFPGRKLLDALIdLPFALSPVVagLTLALLYGSNGWLGSWLASFGIQ---- 137

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121856  162 VIFAYLG--------GIALHVWTIKGYFETIDGSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVA 233
Cdd:TIGR00969 138 IIFTWPGmalamifvSLPFVVREVQPVLEELGTEAEEAAATLGASGWQTFWRVTLPSIRWALLYGVVLTFARALGEFGAV 217

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*..
gi 489121856  234 SLLLRDVNSYTLAVGMQQYLNPQNYLW-GDFAAAAVLSAIPITLVFL 279
Cdd:TIGR00969 218 VVVSGNIPGKTLTLPLLIEERLEQYDYpGAYVIAAVLLLVSLVTLFL 264
UgpA COG1175
ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism];
22-226 2.65e-08

ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism];


Pssm-ID: 440788 [Multi-domain]  Cd Length: 298  Bit Score: 53.99  E-value: 2.65e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121856  22 IFIAAIMFPLLMVIAISLREGNFATGSliPENISWEHWKLALgfsvehADGRvtpppfpvllwLWNSVKVASITAIGIVT 101
Cdd:COG1175   30 LLLVFVLYPLLYTLYLSFTDWNLLGPP--PEFVGLDNYARLF------TDPR-----------FWNALGNTLLFTVVSVP 90

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121856 102 LSTTCAYAFARM---RFPGKaTLLKGMLIFqmfPAVLSLVAL----YALFDR----LGQYIPFIGLNTH---GGVIFAYL 167
Cdd:COG1175   91 LQLVLGLLLALLlnrKLRGR-GFFRTLFFL---PWVISPVVValiwKWLFNPdyglLNALLGALGLEPInwlGDPSLALP 166

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 489121856 168 GGIALHVWTIKGYF--------ETIDGSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAA 226
Cdd:COG1175  167 AVIIVTVWKGTGFNmliflaglQSIPRELYEAARIDGASPWQRFRRITLPLLRPTILFVLVLSTIGA 233
potC PRK09500
spermidine/putrescine ABC transporter membrane protein; Reviewed
 86-234 2.72e-08

spermidine/putrescine ABC transporter membrane protein; Reviewed


Pssm-ID: 236542 [Multi-domain]  Cd Length: 256  Bit Score: 53.45  E-value: 2.72e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121856  86 WNSVKVASITAIGIVTLSTTCAYAFARMRFPGKATLLKGMLIFQMFPAVLSLVALYALFDRLGQYIPFIGLnthggvIFA 165
Cdd:PRK09500  60 QHSLTMAVFSATFATLIGSLTAVALYRYRFRGKKFVSGMLFVVMMSPDIVMAISLLVLFMLLGIQLGFWSL------LFA 133

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121856 166 YLG-GIALHVWTIKGYFETIDGSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVAS 234
Cdd:PRK09500 134 HITfCLPFVVVTVYSRLKGFDVRMLEAAKDLGASEFTILRKIILPLALPAVAAGWLLSFTLSLDDVVVSS 203
cysT CHL00187
sulfate transport protein; Provisional
 80-229 1.97e-07

sulfate transport protein; Provisional


Pssm-ID: 214388 [Multi-domain]  Cd Length: 237  Bit Score: 50.78  E-value: 1.97e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121856  80 PVLLWLWN-SVKVASITAIGIVTLSTTCAYAFARMRFPGKATLLKGM-LIFQMFPAV--LSLVALYALFDRLGQYIPFIG 155
Cdd:CHL00187  51 PIALSAYSlTLSMALIAALINGFFGLLIAWVLVRYNFPGKRLLDAAVdLPFALPTSVagLTLATVYGDNGWIGHLLSHLG 130

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 489121856 156 LN---THGGVIFAYL-GGIALHVWTIKGYFETIDGSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITE 229
Cdd:CHL00187 131 IQivfTKLGVLLAMIfVSFPFVVRTIQPVLQEIEKELEEAAWSLGASPWQTFWKVIFPPLIPALLTGLALTFSRAIGE 208
permease_CysT TIGR02139
sulfate ABC transporter, permease protein CysT; This model represents CysT, one of two ...
 81-229 2.53e-07

sulfate ABC transporter, permease protein CysT; This model represents CysT, one of two homologous, tandem permeases in the sulfate ABC transporter system; the other is CysW (TIGR02140). The sulfate transporter has been described in E. coli as transporting sulfate, thiosulfate, selenate, and selenite. Sulfate transporters may also transport molybdate ion if a specific molybdate transporter is not present. [Transport and binding proteins, Anions]


Pssm-ID: 131194  Cd Length: 265  Bit Score: 50.79  E-value: 2.53e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121856   81 VLLWLWNSVKVASITAIGIVTLSTTCAYAFARMRFPGKaTLLKGM--LIFQMFPAV--LSLVALYALFDRLGQYIPFIGL 156
Cdd:TIGR02139  48 VLAAYKLSFGTALIAALINAVFGTLLAWVLVRYRFPGK-RIVDALvdLPFALPTAVagIALATLYSPNGWIGSFLAPLGI 126

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 489121856  157 N---THGGVIFAYL-GGIALHVWTIKGYFETIDGSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITE 229
Cdd:TIGR02139 127 KiafTPLGIVIALVfVSLPFVVRTVQPVLEEIEKELEEAAASLGASRWQTFWRVILPALLPALLTGFALAFARAVGE 203
BPD_transp_1 pfam00528
Binding-protein-dependent transport system inner membrane component; The alignments cover the ...
 125-286 6.60e-07

Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.


Pssm-ID: 334128 [Multi-domain]  Cd Length: 183  Bit Score: 48.45  E-value: 6.60e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121856  125 MLIFQMFPAVLSLVALYALFDRLGqyipfIGLNTHGGVIFAYLGGIALHVWTIKGYFETIDGSLEEAAALDGATPWQAFR 204
Cdd:pfam00528  24 IDLLQALPSFVLAILLVVIAILSI-----LGHGILPAIILALLGWAGYARLIRRAALRSLPSDLVEAARALGASRWQIFR 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121856  205 LVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDVN-SYTLAVGMQQYLNPQNYLwgdFAAAAVLSAIPITLVFLLAQR 283
Cdd:pfam00528  99 KIILPNALPPILTGLALAFGGALGGAVLLEFLGSWPGlGLLLIEAILGYDYPEIQG---PVLAAALILLLLNLLVDILQR 175


                  ...
gi 489121856  284 WLV 286
Cdd:pfam00528 176 LLD 178
PRK10971 PRK10971
sulfate/thiosulfate ABC transporter permease CysT;
107-280 1.16e-04

sulfate/thiosulfate ABC transporter permease CysT;


Pssm-ID: 182873  Cd Length: 277  Bit Score: 42.82  E-value: 1.16e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121856 107 AYAFARMRFPGKaTLLKGM--LIFQMFPAV--LSLVALYALFDRLGQYIPFIGLNthggVIFAYLG--------GIALHV 174
Cdd:PRK10971  82 AWILTRYRFPGR-TLLDALmdLPFALPTAVagLTLASLFSVNGWYGEWLAKFDIK----VTYTWLGiavamaftSIPFVV 156

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121856 175 WTIKGYFETIDGSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDVNSYTLAVGMQQYLN 254
Cdd:PRK10971 157 RTVQPVLEELGPEYEEAAETLGATRWQSFRKVVLPELSPALLAGVALSFTRSLGEFGAVIFIAGNIAWKTEVTSLMIFVR 236

                        170       180
                 ....*....|....*....|....*..
gi 489121856 255 PQNYlwgDF-AAAAVLSAIPITLVFLL 280
Cdd:PRK10971 237 LQEF---DYpAASAIASVILAASLLLL 260
cysW PRK11602
sulfate/thiosulfate ABC transporter permease CysW;
85-279 6.76e-04

sulfate/thiosulfate ABC transporter permease CysW;


Pssm-ID: 183225  Cd Length: 283  Bit Score: 40.51  E-value: 6.76e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121856  85 LWNSVKVASITAIGIVTLSTTCAYAFARMRFPGKATLLKGMLI-FQMFPAVLSLvaLYALFdrLGQYIPFIG-LNTHGGV 162
Cdd:PRK11602  66 IWLTVLIALIAVPVNLVFGILLAWLVTRFNFPGRQLLLTLLDIpFAVSPVVAGL--VYLLF--YGSNGPLGGwLDEHNLQ 141

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489121856 163 IFAYLGGIALHVWTIKGYFETID--------GSLE-EAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVA 233
Cdd:PRK11602 142 LMFSWPGMVLVTIFVTCPFVVRElvpvmlsqGSQEdEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAV 221

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*..
gi 489121856 234 SLLLRDVNSYTLAVGMQQYLNPQNY-LWGDFAAAAVLSAIPITLVFL 279
Cdd:PRK11602 222 SVVSGSIRGETLSLPLQIELLEQDYnTVGSFTAAALLTLMAIITLFL 268
LplB COG4209
ABC-type polysaccharide transport system, permease component [Carbohydrate transport and ...
 183-222 9.09e-04

ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism];


Pssm-ID: 443357 [Multi-domain]  Cd Length: 316  Bit Score: 40.07  E-value: 9.09e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 489121856 183 TIDGSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILS 222
Cdd:COG4209  202 GIDPELYEAAAIDGAGRWQQIWHITLPGIRPTIVILLILN 241
malF PRK10999
maltose ABC transporter permease MalF;
179-223 6.78e-03

maltose ABC transporter permease MalF;


Pssm-ID: 236816 [Multi-domain]  Cd Length: 520  Bit Score: 38.02  E-value: 6.78e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*
gi 489121856 179 GYFETIDGSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSF 223
Cdd:PRK10999 396 GLLKAIPDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASF 440
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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